View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14456_high_11 (Length: 236)
Name: NF14456_high_11
Description: NF14456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14456_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 7224206 - 7224022
Alignment:
| Q |
15 |
attattattacaccaaacacgtttaagaaaaacaagttgagaataagtggccatagttccaagggggaattatgaaccatatgaaacgaacgcccctagc |
114 |
Q |
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| T |
7224206 |
attattattacaccaaacacgtttaagaaaaacaagttgagaataagtggccatagttccaagggg-aattatgaaccatatgaaacgaacgcccctagc |
7224108 |
T |
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| Q |
115 |
agctgtaataacctttatcaggtttcatttgattaaaagaatggtctaacatgaatgggttagttatcttaccaaagttcattagat |
201 |
Q |
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| T |
7224107 |
agctgtaataacctttatcaggtttcatttgattaaaagaatggtctaacatgaat-ggttagttatcttaccaaagttcactagat |
7224022 |
T |
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