View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14456_high_9 (Length: 249)
Name: NF14456_high_9
Description: NF14456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14456_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 6188485 - 6188725
Alignment:
| Q |
1 |
ctagagtagtaaaggatgcaagttcgaatatttcatacatattttcaatagttcaacccaatttaacatttattcaacttatttaacgaaactacgactc |
100 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
6188485 |
ctagagtagtaaagaatgcaagttcgaatatttcatacatattttcaatagttcaacccaattcaacatttattcaacttatttaacgaaactacgactc |
6188584 |
T |
|
| Q |
101 |
aaacgagatcaaataaacgaaagatcttgtcaaattccattccaacctgttgaatcgactgatacatcaaattcgtaaaacatccaacaacattttccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |
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| T |
6188585 |
aaacgagatcaaataaacgaaagatcttgtcaaattccattccaacctgttgaatcaactgatacattaaattcgtaaaacatccaacaacattttccat |
6188684 |
T |
|
| Q |
201 |
tatgctttctttttcttaacttcaacaattgtcttcttttc |
241 |
Q |
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||| |||||||||||||||||||||| |||||||||||||| |
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| T |
6188685 |
tatactttctttttcttaacttcaacgattgtcttcttttc |
6188725 |
T |
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