View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14459_high_14 (Length: 262)

Name: NF14459_high_14
Description: NF14459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14459_high_14
NF14459_high_14
[»] chr4 (51 HSPs)
chr4 (89-251)||(32569504-32569666)
chr4 (18-88)||(16820968-16821038)
chr4 (18-90)||(6164209-6164281)
chr4 (18-88)||(4089258-4089328)
chr4 (20-90)||(4268820-4268890)
chr4 (18-96)||(12356360-12356438)
chr4 (18-88)||(29591305-29591375)
chr4 (18-88)||(50619202-50619271)
chr4 (18-90)||(43944623-43944694)
chr4 (18-89)||(789529-789600)
chr4 (18-88)||(16536164-16536234)
chr4 (18-88)||(33108673-33108743)
chr4 (19-88)||(36395216-36395285)
chr4 (18-90)||(54897424-54897496)
chr4 (18-88)||(7769054-7769124)
chr4 (18-88)||(18067879-18067949)
chr4 (19-88)||(43202384-43202452)
chr4 (20-88)||(32217162-32217230)
chr4 (18-88)||(28119906-28119976)
chr4 (28-94)||(53003950-53004016)
chr4 (20-94)||(54945774-54945846)
chr4 (18-96)||(5091604-5091680)
chr4 (20-88)||(50603346-50603414)
chr4 (32-88)||(54054659-54054715)
chr4 (19-88)||(3783498-3783570)
chr4 (20-90)||(39877245-39877317)
chr4 (18-93)||(15186359-15186428)
chr4 (18-90)||(30154161-30154233)
chr4 (18-82)||(52533791-52533855)
chr4 (20-63)||(31517284-31517327)
chr4 (18-56)||(19503137-19503175)
chr4 (18-88)||(37402759-37402828)
chr4 (25-75)||(42898757-42898807)
chr4 (18-79)||(28120058-28120119)
chr4 (20-61)||(46149057-46149098)
chr4 (19-88)||(55882800-55882868)
chr4 (18-58)||(47231902-47231942)
chr4 (20-87)||(16572488-16572555)
chr4 (21-60)||(24679671-24679710)
chr4 (20-63)||(53655903-53655946)
chr4 (19-86)||(54655879-54655945)
chr4 (18-88)||(30387134-30387204)
chr4 (18-91)||(31680462-31680533)
chr4 (37-83)||(46688229-46688275)
chr4 (27-56)||(4220319-4220348)
chr4 (18-87)||(28755736-28755803)
chr4 (18-55)||(39844023-39844060)
chr4 (18-82)||(292231-292295)
chr4 (18-58)||(37988051-37988091)
chr4 (19-47)||(39877370-39877398)
chr4 (19-87)||(41265575-41265642)
[»] chr3 (36 HSPs)
chr3 (18-88)||(39074534-39074604)
chr3 (18-96)||(6842735-6842813)
chr3 (18-93)||(272336-272411)
chr3 (18-89)||(10617283-10617354)
chr3 (18-90)||(46352750-46352822)
chr3 (18-90)||(49893447-49893519)
chr3 (18-88)||(43786987-43787057)
chr3 (18-88)||(48725387-48725457)
chr3 (18-88)||(52520797-52520867)
chr3 (18-88)||(858705-858775)
chr3 (18-88)||(11308211-11308280)
chr3 (19-93)||(40362575-40362649)
chr3 (20-82)||(42548213-42548274)
chr3 (19-88)||(4168300-4168369)
chr3 (18-83)||(41304119-41304184)
chr3 (19-88)||(42964249-42964318)
chr3 (20-88)||(2938040-2938108)
chr3 (18-64)||(2505465-2505511)
chr3 (18-88)||(18014788-18014858)
chr3 (18-88)||(43269739-43269809)
chr3 (19-89)||(7468528-7468596)
chr3 (18-87)||(49529269-49529336)
chr3 (18-99)||(41553930-41554010)
chr3 (20-89)||(52246701-52246769)
chr3 (18-62)||(28139425-28139469)
chr3 (19-87)||(33141002-33141070)
chr3 (19-90)||(52552590-52552660)
chr3 (18-88)||(50395563-50395633)
chr3 (18-61)||(20924108-20924151)
chr3 (19-58)||(22249003-22249042)
chr3 (20-87)||(24488484-24488551)
chr3 (18-65)||(53489847-53489894)
chr3 (38-88)||(2362948-2362998)
chr3 (20-74)||(38852335-38852388)
chr3 (20-88)||(51665715-51665783)
chr3 (28-88)||(41993620-41993680)
[»] chr2 (34 HSPs)
chr2 (18-96)||(30486326-30486404)
chr2 (18-88)||(20553047-20553117)
chr2 (18-88)||(31438762-31438832)
chr2 (18-89)||(32360868-32360939)
chr2 (18-88)||(22068320-22068390)
chr2 (18-88)||(22567718-22567788)
chr2 (18-88)||(27856396-27856466)
chr2 (18-96)||(31390128-31390206)
chr2 (18-88)||(44588018-44588088)
chr2 (19-82)||(1859279-1859342)
chr2 (18-97)||(4381911-4381990)
chr2 (18-90)||(6580305-6580374)
chr2 (18-92)||(22887866-22887940)
chr2 (19-88)||(26387064-26387133)
chr2 (19-88)||(34442533-34442601)
chr2 (18-88)||(8969407-8969477)
chr2 (19-81)||(25782840-25782902)
chr2 (20-88)||(28601084-28601152)
chr2 (20-87)||(13574031-13574097)
chr2 (18-88)||(3668113-3668183)
chr2 (18-96)||(4022471-4022549)
chr2 (20-88)||(35851750-35851819)
chr2 (19-94)||(20431555-20431630)
chr2 (19-58)||(38590904-38590943)
chr2 (18-88)||(5093540-5093609)
chr2 (18-88)||(32860218-32860287)
chr2 (18-86)||(561520-561588)
chr2 (20-91)||(31782562-31782633)
chr2 (18-90)||(45262026-45262098)
chr2 (28-87)||(2898197-2898256)
chr2 (51-82)||(38591023-38591054)
chr2 (18-64)||(27584854-27584900)
chr2 (19-51)||(11021259-11021291)
chr2 (47-91)||(29771568-29771612)
[»] chr1 (50 HSPs)
chr1 (18-88)||(51065748-51065818)
chr1 (18-95)||(19010680-19010757)
chr1 (20-92)||(30294377-30294449)
chr1 (18-88)||(5694437-5694507)
chr1 (18-88)||(47010109-47010179)
chr1 (18-99)||(29657887-29657967)
chr1 (18-87)||(38162966-38163035)
chr1 (20-100)||(50128161-50128240)
chr1 (18-89)||(48383110-48383181)
chr1 (18-88)||(15227855-15227925)
chr1 (18-96)||(41730424-41730502)
chr1 (18-88)||(45449244-45449314)
chr1 (19-88)||(12072062-12072131)
chr1 (19-88)||(18043279-18043348)
chr1 (18-93)||(9266723-9266798)
chr1 (18-89)||(24178462-24178533)
chr1 (18-88)||(42769990-42770060)
chr1 (18-90)||(28725903-28725975)
chr1 (19-82)||(52431697-52431761)
chr1 (20-87)||(13961329-13961396)
chr1 (18-88)||(14350279-14350347)
chr1 (18-88)||(19031815-19031885)
chr1 (18-88)||(45431394-45431464)
chr1 (19-88)||(3784713-3784782)
chr1 (21-90)||(30657721-30657790)
chr1 (19-88)||(3097776-3097842)
chr1 (37-88)||(29210529-29210580)
chr1 (18-89)||(47532670-47532741)
chr1 (18-62)||(12307033-12307077)
chr1 (24-88)||(26228300-26228364)
chr1 (19-88)||(38701937-38702002)
chr1 (27-95)||(39497728-39497796)
chr1 (18-68)||(35985641-35985691)
chr1 (18-63)||(51368810-51368855)
chr1 (28-88)||(8472914-8472974)
chr1 (20-88)||(11796971-11797038)
chr1 (18-88)||(17333284-17333352)
chr1 (37-88)||(21112681-21112732)
chr1 (19-90)||(30217879-30217948)
chr1 (18-61)||(36446352-36446395)
chr1 (18-61)||(43286838-43286881)
chr1 (18-89)||(48071598-48071668)
chr1 (20-61)||(29683314-29683355)
chr1 (18-91)||(30664164-30664237)
chr1 (18-91)||(38595749-38595822)
chr1 (20-60)||(6770455-6770495)
chr1 (18-90)||(23473462-23473534)
chr1 (37-88)||(21117423-21117474)
chr1 (20-57)||(52749720-52749757)
chr1 (18-89)||(23822522-23822591)
[»] chr7 (39 HSPs)
chr7 (18-90)||(24438593-24438665)
chr7 (19-89)||(4628683-4628753)
chr7 (18-94)||(29993481-29993557)
chr7 (18-89)||(24798402-24798473)
chr7 (18-88)||(12218437-12218506)
chr7 (18-88)||(13064876-13064946)
chr7 (20-90)||(5239403-5239473)
chr7 (18-88)||(34333399-34333469)
chr7 (18-88)||(34606377-34606447)
chr7 (19-88)||(42044294-42044362)
chr7 (18-98)||(38128408-38128488)
chr7 (19-86)||(28588026-28588093)
chr7 (18-65)||(45045886-45045933)
chr7 (18-84)||(18486077-18486143)
chr7 (19-88)||(30810772-30810841)
chr7 (20-63)||(47657096-47657139)
chr7 (18-65)||(47839608-47839655)
chr7 (18-88)||(23363167-23363237)
chr7 (19-64)||(7689224-7689269)
chr7 (19-87)||(5729463-5729531)
chr7 (18-89)||(525075-525145)
chr7 (20-63)||(33636570-33636613)
chr7 (21-87)||(23357711-23357777)
chr7 (20-90)||(29835702-29835771)
chr7 (18-88)||(46716754-46716824)
chr7 (18-80)||(47083171-47083232)
chr7 (20-65)||(8754608-8754653)
chr7 (20-88)||(6820032-6820099)
chr7 (20-64)||(18117261-18117305)
chr7 (20-87)||(11686324-11686390)
chr7 (38-85)||(34546336-34546383)
chr7 (22-61)||(43594063-43594102)
chr7 (21-83)||(1737099-1737160)
chr7 (18-96)||(6097453-6097531)
chr7 (18-64)||(28262142-28262188)
chr7 (19-88)||(34556892-34556959)
chr7 (39-88)||(37674106-37674153)
chr7 (51-92)||(13106310-13106350)
chr7 (18-98)||(19434610-19434689)
[»] chr8 (40 HSPs)
chr8 (18-89)||(34228798-34228869)
chr8 (18-88)||(4537744-4537814)
chr8 (18-87)||(30675574-30675642)
chr8 (18-90)||(20831551-20831623)
chr8 (18-88)||(168582-168652)
chr8 (18-88)||(2805260-2805330)
chr8 (18-88)||(13643127-13643197)
chr8 (18-88)||(13743552-13743622)
chr8 (18-96)||(16888536-16888614)
chr8 (18-88)||(27988500-27988569)
chr8 (18-88)||(28045802-28045871)
chr8 (19-88)||(42034981-42035050)
chr8 (18-89)||(16394060-16394131)
chr8 (20-90)||(9537822-9537892)
chr8 (18-86)||(16890482-16890550)
chr8 (18-88)||(32114025-32114095)
chr8 (19-88)||(9063052-9063121)
chr8 (18-83)||(9253907-9253972)
chr8 (18-90)||(7304516-7304588)
chr8 (18-81)||(21595962-21596025)
chr8 (19-89)||(43119334-43119403)
chr8 (19-88)||(11112756-11112825)
chr8 (18-79)||(12203970-12204031)
chr8 (18-79)||(12448398-12448459)
chr8 (19-88)||(29444140-29444209)
chr8 (18-86)||(39406958-39407024)
chr8 (18-90)||(29235351-29235423)
chr8 (18-65)||(33357152-33357199)
chr8 (18-88)||(3930233-3930303)
chr8 (18-88)||(43714188-43714258)
chr8 (19-75)||(37373322-37373378)
chr8 (29-88)||(10618125-10618184)
chr8 (20-85)||(28626886-28626950)
chr8 (18-65)||(36730560-36730607)
chr8 (20-88)||(2490157-2490225)
chr8 (24-60)||(4648316-4648352)
chr8 (19-90)||(40831394-40831465)
chr8 (18-63)||(39751496-39751541)
chr8 (18-99)||(22956821-22956902)
chr8 (19-79)||(39206303-39206363)
[»] chr6 (35 HSPs)
chr6 (18-88)||(32929508-32929578)
chr6 (18-90)||(3515882-3515954)
chr6 (18-88)||(392212-392282)
chr6 (20-88)||(12525837-12525905)
chr6 (19-89)||(1391177-1391247)
chr6 (18-88)||(4215811-4215881)
chr6 (18-88)||(32985193-32985263)
chr6 (18-94)||(7851153-7851229)
chr6 (18-88)||(2581068-2581138)
chr6 (18-88)||(23402254-23402324)
chr6 (18-82)||(2350768-2350832)
chr6 (18-88)||(18276612-18276685)
chr6 (18-88)||(26467124-26467194)
chr6 (18-88)||(27433608-27433678)
chr6 (19-89)||(35044006-35044075)
chr6 (19-80)||(11115106-11115166)
chr6 (18-90)||(12145115-12145187)
chr6 (20-88)||(29978350-29978417)
chr6 (18-88)||(1840247-1840317)
chr6 (18-88)||(34706837-34706907)
chr6 (18-65)||(29451138-29451185)
chr6 (18-64)||(5323516-5323562)
chr6 (19-84)||(3026013-3026078)
chr6 (20-88)||(21878353-21878415)
chr6 (18-71)||(22417309-22417362)
chr6 (37-91)||(20898064-20898117)
chr6 (19-61)||(28225337-28225379)
chr6 (18-88)||(34851849-34851919)
chr6 (19-64)||(13416983-13417028)
chr6 (19-88)||(25165413-25165482)
chr6 (18-82)||(34712131-34712195)
chr6 (18-57)||(961125-961164)
chr6 (37-88)||(34477569-34477620)
chr6 (38-79)||(11616141-11616182)
chr6 (20-80)||(1127934-1127994)
[»] chr5 (24 HSPs)
chr5 (18-88)||(11957967-11958037)
chr5 (18-88)||(34650833-34650903)
chr5 (18-90)||(31467836-31467908)
chr5 (21-93)||(35132640-35132712)
chr5 (18-88)||(8787455-8787525)
chr5 (18-88)||(13661924-13661994)
chr5 (18-90)||(10054351-10054423)
chr5 (20-88)||(40564404-40564472)
chr5 (19-82)||(6283679-6283742)
chr5 (18-88)||(11846188-11846258)
chr5 (28-90)||(21547392-21547454)
chr5 (18-88)||(35504241-35504310)
chr5 (39-97)||(10070086-10070144)
chr5 (18-68)||(12506412-12506462)
chr5 (37-94)||(19647671-19647728)
chr5 (30-65)||(10955974-10956009)
chr5 (18-65)||(10956067-10956114)
chr5 (51-88)||(8927556-8927593)
chr5 (19-92)||(9721604-9721676)
chr5 (19-96)||(40057424-40057501)
chr5 (18-82)||(14214055-14214119)
chr5 (19-82)||(20175344-20175406)
chr5 (18-80)||(4268677-4268739)
chr5 (20-61)||(19436865-19436906)
[»] scaffold0425 (1 HSPs)
scaffold0425 (18-96)||(10826-10904)
[»] scaffold0190 (1 HSPs)
scaffold0190 (18-90)||(15012-15084)
[»] scaffold0264 (1 HSPs)
scaffold0264 (18-88)||(23077-23147)
[»] scaffold0188 (1 HSPs)
scaffold0188 (18-88)||(6110-6180)
[»] scaffold0021 (1 HSPs)
scaffold0021 (18-88)||(116320-116390)
[»] scaffold0524 (1 HSPs)
scaffold0524 (18-81)||(941-1004)
[»] scaffold0113 (1 HSPs)
scaffold0113 (18-93)||(41035-41110)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-88)||(53685-53755)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-89)||(68289-68360)
[»] scaffold0034 (1 HSPs)
scaffold0034 (19-88)||(95585-95654)
[»] scaffold0045 (1 HSPs)
scaffold0045 (28-87)||(53358-53417)
[»] scaffold0038 (1 HSPs)
scaffold0038 (19-61)||(25835-25877)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-88)||(233969-234039)
[»] scaffold0050 (1 HSPs)
scaffold0050 (20-88)||(69344-69411)
[»] scaffold0674 (1 HSPs)
scaffold0674 (37-88)||(7916-7967)
[»] scaffold0549 (1 HSPs)
scaffold0549 (37-88)||(7404-7455)
[»] scaffold1152 (1 HSPs)
scaffold1152 (19-89)||(795-864)


Alignment Details
Target: chr4 (Bit Score: 163; Significance: 4e-87; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 89 - 251
Target Start/End: Original strand, 32569504 - 32569666
Alignment:
Q  89 attaaatatatacagctaagataagatttgtattatctcacttgtgagttgtgaccacggtaaagaaaattgttatgtaatatcttctttctctccctgt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32569504 attaaatatatacagctaagataagatttgtattatctcacttgtgagttgtgaccacggtaaagaaaattgttatgtaatatcttctttctctccctgt 32569603  T
Q  189 gattttctagtccctctcttctatttctcctctaattgttactgttttttcttattcacctat 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32569604 gattttctagtccctctcttctatttctcctctaattgttactgttttttcttattcacctat 32569666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 16820968 - 16821038
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  16820968 ccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 16821038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 6164209 - 6164281
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  6164209 ccttttatggtaataattctcttttatggtatgcttaaccagtaccccgaggacaccggttagcaggacccat 6164281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 4089258 - 4089328
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  4089258 ccttttatggtaataattctcttttatggtatgtttaaccagtgccccaggggcaccagttagcaggaccc 4089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 4268890 - 4268820
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  4268890 ttttatggtaataattcccttttatggtatgattaaccagtgccccgagggcaccggttagcaggacccat 4268820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 12356360 - 12356438
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||  || ||| ||||||||||||||||||||||||||    
T  12356360 ccttttatgataataattctcttttatggtatgcttaaccagtgttccgggggcaccggttagcaggacccattaaata 12356438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 29591305 - 29591375
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  29591305 ccttttatggtaataattaccttttatggtatgcttaactagtgccccgggggcaccggttagcaggaccc 29591375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 50619202 - 50619271
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  50619202 ccttttatggtaataattcccttttatggtatgcttaaccagtg-cccaggggcaccggttagcgggaccc 50619271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 43944623 - 43944694
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  43944623 ccttttatggtaataattcccttgtatggtatgcttaaccagtgcccgaggg-caccggttagcaagacccat 43944694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 789600 - 789529
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||| |||||||    
T  789600 ccttttatggtaataattcccttttatggtatgcttaaccagtagcccagaggcaccggttagcgggaccca 789529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 16536164 - 16536234
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  16536164 ccttttatggtaataattctattttatggtattcttaaccagtgccccgggggcaccggttagcaggaccc 16536234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 33108743 - 33108673
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||| | | ||||||||||||||||||    
T  33108743 ccttttatggtaataattcctttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 33108673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 36395216 - 36395285
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||| |||| |||||||||||||    
T  36395216 cttttatgataataattcccttttatggtatgcttaaccagtgccctgggggcaccagttagcaggaccc 36395285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 54897424 - 54897496
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||| | | ||||||||||||||||||||    
T  54897424 ccttttatggtaataatttccttttatggtatgtttaaccagtgtcccggaggcaccggttagcaggacccat 54897496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 7769054 - 7769124
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||| || ||||||| ||||||| ||| ||||||||||||||||||    
T  7769054 ccttttatggtaataattctcttttatggcatacttaacccgtgccccgggggcaccggttagcaggaccc 7769124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 18067949 - 18067879
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||| ||| |||||||||||| |||||    
T  18067949 ccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 18067879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 43202452 - 43202384
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||| ||| ||||||||||||||||||    
T  43202452 cttttatggtaataattctcttttatggtaagcttaaccagtg-cccgggggcaccggttagcaggaccc 43202384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 32217162 - 32217230
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| | | ||||||||| ||||||||    
T  32217162 ttttatgataataattcccttttatggtatgcttaacctgtgccccggaggcaccggttaacaggaccc 32217230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 28119976 - 28119906
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||| |||| |||||| | |||||||||||||||||||| | |||||||||||||| |||||    
T  28119976 ccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagcatgaccc 28119906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 53004016 - 53003950
Alignment:
Q  28 taataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaa 94  Q
    ||||||||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||| |||||    
T  53004016 taataattctcttttatgatatgcttaatcagtgtccccgggacaccggttagcaggaccctttaaa 53003950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 54945846 - 54945774
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaa 94  Q
    |||||||||| ||||||| ||||||||||| |||||||||||| || || |||||||||||||||||||||||||    
T  54945846 ttttatggta-taattcctttttatggtatacttaaccagtgctcc-ggaacaccggttagcaggacccattaaa 54945774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 5091680 - 5091604
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggga-caccggttagcaggacccattaaata 96  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||  |||| ||||||||||||||||||||| ||||    
T  5091680 ccttttatagtaataattcccttttat-gtatgcttaaccagtgtcc--gggagcaccggttagcaggacccatttaata 5091604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 50603346 - 50603414
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||| ||||||||| ||||||||||||||||||||||| ||||  | ||||| |||||||||||||    
T  50603346 ttttatgataataattctcttttatggtatgcttaaccagtaccccgagaacaccagttagcaggaccc 50603414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 54054659 - 54054715
Alignment:
Q  32 aattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||||    
T  54054659 aatttccttttatggtatgcttaaccagtgccccgggggcaccggttggcaggaccc 54054715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 3783570 - 3783498
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgctta---accagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||||||   || |||||||| ||  ||||||||| ||||||||    
T  3783570 cttttatggtaataattcccttttatggtatgcttaagtactagtgccccgggagcaccggttaacaggaccc 3783498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 39877317 - 39877245
Alignment:
Q  20 ttttatggtaataattcccttttatggtat--gcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||| |||||||||| ||||||||||||  |||||||||||||||| | | ||| ||||||||||||||||    
T  39877317 ttttatagtaataattctcttttatggtatatgcttaaccagtgccccggaggcacgggttagcaggacccat 39877245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 15186359 - 15186428
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaa 93  Q
    |||||||||||||||||||| ||||||||||      ||||||||||| ||| ||||||||| |||||||||||||    
T  15186359 ccttttatggtaataattccattttatggta------accagtgccccgggggcaccggttaacaggacccattaa 15186428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 30154233 - 30154161
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||| |||| ||||||||| |||||||||| |||||||||||||||||    ||| |||||||||||||||||    
T  30154233 ccttatatgataataattctcttttatggtgtgcttaaccagtgccccgaaaacatcggttagcaggacccat 30154161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 52533855 - 52533791
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||||||||||||||||||||||| ||||||  | | |||| ||||| ||||||||    
T  52533855 ccttttatggtaataattcccttttatggtatgtttaacccatactccagagacacaggttagca 52533791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 31517284 - 31517327
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgcc 63  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  31517284 ttttatggtaataattctcttatatggtatgcttaaccagtgcc 31517327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 19503175 - 19503137
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaac 56  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19503175 ccttttattgtaataattcccttttatggtatgcttaac 19503137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 37402828 - 37402759
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||| |||| |||||| || |||||||||||||||||||  || |||||||||||| |||||    
T  37402828 ccttttatggtaagaatttccttttttg-tatgcttaaccagtgccccgagggcaccggttagcatgaccc 37402759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 42898807 - 42898757
Alignment:
Q  25 tggtaataattcccttttatggtatgcttaaccagtgccccagggacaccg 75  Q
    |||||||||||| ||||||||||||||||||||| || ||| |||||||||    
T  42898807 tggtaataattctcttttatggtatgcttaaccaatgtcccggggacaccg 42898757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28120119 - 28120058
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggtta 79  Q
    ||||||||||||| |||| |||||| | |||||||||||| ||||||| ||| |||||||||    
T  28120119 ccttttatggtaagaatttcctttttttgtatgcttaacctgtgccccgggggcaccggtta 28120058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 46149057 - 46149098
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  46149057 ttttatggtaataattctcttttatggtatgtttaaccagtg 46149098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 55882800 - 55882868
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||| ||||| |||||||||||| ||||||| ||||| | ||| |||||||||| |||||||    
T  55882800 cttttatggtaa-aattcacttttatggtatacttaacccgtgcctcgggggcaccggttagtaggaccc 55882868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 47231942 - 47231902
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaacca 58  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  47231942 ccttttatgataataattcccttttatggtatgtttaacca 47231902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 16572555 - 16572488
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||||| |||| |||||| | |||| ||||| ||||||||| ||| |||||||||||| ||||    
T  16572555 ttttatggtaagaatttcctttttttgtatacttaatcagtgccccgggggcaccggttagcatgacc 16572488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 24679710 - 24679671
Alignment:
Q  21 tttatggtaataattcccttttatggtatgcttaaccagt 60  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  24679710 tttatggtaataattctcttttatggtatgcttaatcagt 24679671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 53655946 - 53655903
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgcc 63  Q
    |||||||||||||||| | ||||||||||||||||| |||||||    
T  53655946 ttttatggtaataatttcattttatggtatgcttaatcagtgcc 53655903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 54655945 - 54655879
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggac 86  Q
    |||||| | ||||||||| || ||||| ||||||||||||||| ||| ||| ||||||||||||||||    
T  54655945 cttttaggataataattctctcttatgatatgcttaaccagtgtccc-ggggcaccggttagcaggac 54655879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 30387204 - 30387134
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||| ||||||| ||||||||| || | |||  |  |||||||||||||| ||||    
T  30387204 ccttttatggtaataattcctttttatgatatgcttaatcaataccctggaaacaccggttagcagaaccc 30387134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 31680533 - 31680462
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatt 91  Q
    |||||||||||||||||||  ||||||| |||| |||||| ||| |||  ||||||| |||||||||| |||||    
T  31680533 ccttttatggtaataattcatttttatgatatgtttaacccgtgtccc--ggacacctgttagcaggatccatt 31680462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 46688275 - 46688229
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcag 83  Q
    |||||||||||||||||||||||||| |  ||| |||||||||||||    
T  46688275 ccttttatggtatgcttaaccagtgctctgggggcaccggttagcag 46688229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 4220319 - 4220348
Alignment:
Q  27 gtaataattcccttttatggtatgcttaac 56  Q
    ||||||||||||||||||||||||||||||    
T  4220319 gtaataattcccttttatggtatgcttaac 4220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28755736 - 28755803
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||| ||||| |||| |||||| ||||||||||||  |||||| | |||||||||||||||||||    
T  28755736 ccttttatgataatacttcc-ttttatagtatgcttaacccatgcccc-gagacaccggttagcaggacc 28755803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 39844023 - 39844060
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaa 55  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  39844023 ccttttatggtaataattcctttttagggtatgcttaa 39844060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 292231 - 292295
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||| |||| |||||| | | |||||||||| ||||||| | | ||||||||||||    
T  292231 ccttttatggtaaaaatttcctttttttgcatgcttaacccgtgccccggaggcaccggttagca 292295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 37988051 - 37988091
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaacca 58  Q
    |||||||| |||||||||| ||||||| |||||||||||||    
T  37988051 ccttttattgtaataattctcttttatagtatgcttaacca 37988091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 39877398 - 39877370
Alignment:
Q  19 cttttatggtaataattcccttttatggt 47  Q
    |||||||||||||||||||||||||||||    
T  39877398 cttttatggtaataattcccttttatggt 39877370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 41265575 - 41265642
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||| |||||||||  ||||| ||||||| |||||||||| |||||| |||||| |||||| ||||    
T  41265575 cttttattgtaataattttcttttttggtatgtttaaccagtg-cccaggaacaccgtttagcatgacc 41265642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 39074534 - 39074604
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39074534 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 39074604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 6842735 - 6842813
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  6842735 ccttttatggtaataattcccatttatggtatgcttaaccagtgccccgggggcagcggttagcaggacccattaaata 6842813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 272336 - 272411
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaa 93  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||    
T  272336 ccttttatggtaataattcccttttatggtatgcttaatcggtgccccgggggcaccggttagcaggacccattaa 272411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 10617354 - 10617283
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  10617354 ccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggaccca 10617283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 46352750 - 46352822
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| | | ||||||||||||||||||||    
T  46352750 ccttttatggtaataattcccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggacccat 46352822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 49893447 - 49893519
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  49893447 ccttttatggtaataattcccttttatggtatgcttaatcagtgccccgggggcaccggttagccggacccat 49893519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 43786987 - 43787057
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  43786987 ccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 43787057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 48725387 - 48725457
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||||    
T  48725387 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggaccacgggttagcaggaccc 48725457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 52520797 - 52520867
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  52520797 ccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 52520867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 858705 - 858775
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||    
T  858705 ccttttatggtaataatttccttttatggtatgcttaacccgtgccccgggggcaccggttagccggaccc 858775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 11308280 - 11308211
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  11308280 ccttttatggtaataattcc-ttttatggtatgcttaaccaatgccccaggggcaccgattagcaggaccc 11308211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 40362649 - 40362575
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaa 93  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||  |||| |||||||||||| ||||    
T  40362649 cttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggtaccgattagcaggaccctttaa 40362575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 42548213 - 42548274
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  42548213 ttttatggtaataattcccttttatggtatgcttaaccagtgctcc-gggacaccggttagca 42548274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 4168300 - 4168369
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| |||||||||||||||||||| || |||| ||| ||||||||||||||||||    
T  4168300 cttttatggtaataattctcttttatggtatgcttaacccgtaccccgggggcaccggttagcaggaccc 4168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 41304119 - 41304184
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcag 83  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||| | |||||||||||||||    
T  41304119 ccttttatggtaataatttccttttatggtatgcttaaccaatgccccggagacaccggttagcag 41304184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 42964318 - 42964249
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||| |||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  42964318 cttttatagtaataattcacttttatgatatgcttaaccagtgtctcagggacaccggttagcaggaccc 42964249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 2938108 - 2938040
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||| ||||||||||||||||||| ||| ||||  || ||||||||||||||||||    
T  2938108 ttttatggtaataattcacttttatggtatgcttaacgagtaccccgagggcaccggttagcaggaccc 2938040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 2505465 - 2505511
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccc 64  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  2505465 ccttttatggtaataattcccttttatggtatgtttaaccagtgccc 2505511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 18014788 - 18014858
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||| |||||    
T  18014788 ccttttatgataataatttccttttatggtatgcttaatcagtgccccgggggcaccagttagcaagaccc 18014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 43269809 - 43269739
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||| |||||||||  | |||||||||||||||||||||||||| | | ||||||||||||||||||    
T  43269809 ccttttatagtaataattatcctttatggtatgcttaaccagtgccccggaggcaccggttagcaggaccc 43269739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 7468528 - 7468596
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||| ||  |||||||||||||||||||    
T  7468528 cttttatgataataat-cccttttatggtatgcttaatcagtgcccc-ggagcaccggttagcaggaccca 7468596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 49529336 - 49529269
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    |||||||||||||||||| |||||||||||||| ||||||||||  || ||| |||||||||||| ||||    
T  49529336 ccttttatggtaataatttccttttatggtatgtttaaccagtg--ccgggggcaccggttagcaagacc 49529269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 41554010 - 41553930
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatatat 99  Q
    ||||||||||||||||||   |||||||||||||||||| |||||||  || |||||| |||| |||||||| |||||||||    
T  41554010 ccttttatggtaataattattttttatggtatgcttaacaagtgccctgggaacaccgattagtaggaccca-taaatatat 41553930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 52246701 - 52246769
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||| || | |||| ||||||||||||||    
T  52246701 ttttatagtaataatttccttttatggtatgcttaactagtgcccgagag-caccagttagcaggaccca 52246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 28139425 - 28139469
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgc 62  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||    
T  28139425 ccttttatggtaataattcccttttatggtatacttaaacagtgc 28139469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 33141002 - 33141070
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||| |   |||||||||||| ||||    
T  33141002 cttttatggtaataattcccttttatgatatgcttaatcagtaccccggaagcaccggttagcaagacc 33141070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 52552590 - 52552660
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||| ||||||||||||  ||||||||||  || |||||| ||||||||| |||||||    
T  52552590 cttttatggtaataattctcttttatggtatatttaaccagtg-tccggggacatcggttagcatgacccat 52552660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 50395633 - 50395563
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| |||||||| |||| |||| |||| | || | ||||||| ||||||||||||    
T  50395633 ccttttatggtaataattctcttttatgatatgattaatcagtacaccggagacaccgattagcaggaccc 50395563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 20924108 - 20924151
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||    
T  20924108 ccttttaaggtaataattctcttttatggtatacttaaccagtg 20924151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 22249003 - 22249042
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaacca 58  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  22249003 cttttatggtaataattcccttttatagtatgcttgacca 22249042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 24488484 - 24488551
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||||||||||| |||||||| |||||| ||| ||||| || ||  ||||||||| |||||||    
T  24488484 ttttatggtaataattctcttttatgatatgctgaactagtgctccgggagcaccggttaacaggacc 24488551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 53489894 - 53489847
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    ||||||||| |||||||||  |||||||||||||||||||| ||||||    
T  53489894 ccttttatgataataattctattttatggtatgcttaaccaatgcccc 53489847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 2362948 - 2362998
Alignment:
Q  38 cttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||| |  ||| |||||||||||||||    
T  2362948 cttttatggtatgcttaatcagtgccccggaaacatcggttagcaggaccc 2362998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 38852335 - 38852388
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacacc 74  Q
    ||||||| ||||||||| ||||||||||||| |||||| ||||||| ||||||||    
T  38852335 ttttatgataataattcacttttatggtatgtttaacccgtgcccc-gggacacc 38852388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 51665783 - 51665715
Alignment:
Q  20 ttttatggtaataattcccttttatg-gtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||| |||| |||||| |  |||||||||||| ||||||| |||||||||||||||| |||||    
T  51665783 ttttatggtaagaatttccttttttctgtatgcttaacccgtgcccc-gggacaccggttagcatgaccc 51665715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 41993680 - 41993620
Alignment:
Q  28 taataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| ||||||||||||||||||| ||| ||| |  | ||||||||||||| ||||    
T  41993680 taataattctcttttatggtatgcttaactagtaccctaaaggcaccggttagcagaaccc 41993620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 30486326 - 30486404
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  30486326 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccaataaata 30486404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 20553047 - 20553117
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  20553047 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 20553117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 31438762 - 31438832
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31438762 ccttttatgataataattcccttttatggtatgcttaaccagtgccccggggacaccggttagcaggaccc 31438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 32360939 - 32360868
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  32360939 ccttttatggtaataattcccttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccca 32360868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 22068390 - 22068320
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  22068390 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccgattagcaggaccc 22068320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 22567718 - 22567788
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  22567718 ccttttatggtaataattctcttttatggtatgcttaacccgtgctccaggggcaccggttagcaggaccc 22567788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 27856466 - 27856396
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  27856466 ccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccc 27856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 31390128 - 31390206
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||| |||||||||||||| |||||    
T  31390128 ccttttatggtaataattcccttttatggtatgcttaacccgtgctccgggggcaccgattagcaggacccataaaata 31390206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 44588018 - 44588088
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||  |||||||||||||||||    
T  44588018 ccttttatggtaataattcccttttatggtatgcttaacaagtgccccgggggtaccggttagcaggaccc 44588088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 1859279 - 1859342
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  1859279 cttttatggtaataattctcttttatggtatgcttaaccagtgccctaggaacaccggttagca 1859342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 4381911 - 4381990
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatat 97  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||  ||| |||||||||||||| | ||||||    
T  4381911 ccttttatggtaataattccattttatggtatgcttaaccagtgccccgggagcactggttagcaggacccttaaaatat 4381990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 6580305 - 6580374
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||    
T  6580305 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg---gcggttagcaggacccat 6580374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 22887866 - 22887940
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatta 92  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| |||||| |||||||||    
T  22887866 ccttttatggtaataattctcttttatggtatgcttaaccagtgctccgggggcaccgattagcatgacccatta 22887940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 26387133 - 26387064
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||| ||||||||    
T  26387133 cttttatggtaataattcccttttatggtatgcttaaccagtgccttgggggcaccggttaacaggaccc 26387064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 34442601 - 34442533
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||||||||||    
T  34442601 cttttatggtaataattcccttttatggtatgcttaaccagtg-cccgggggcatcggttagcaggaccc 34442533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 8969477 - 8969407
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||| ||| ||||||||||||| ||||    
T  8969477 ccttttatggtaataatttccttttatagtatgcttaactagtgcccctggggcaccggttagcagtaccc 8969407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 25782902 - 25782840
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagc 81  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  25782902 cttttatgataataattcccttttatggtatgcttaaccagtgtcccggggacatcggttagc 25782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 28601084 - 28601152
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  ||  ||||||||||||||||||    
T  28601084 ttttatggtaataattctcttttatggtatgcttaaccagtgcactgggagcaccggttagcaggaccc 28601152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 13574097 - 13574031
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| |  |||||||||||||||||||    
T  13574097 ttttatggtaataatttccttttatggtatgcttaacccgtgcccta-agacaccggttagcaggacc 13574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 3668183 - 3668113
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||||  || |||||||||||| |||||    
T  3668183 ccttttatggtaataatttccttttatagtatgtttaaccagtgccccgagggcaccggttagcaagaccc 3668113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 4022549 - 4022471
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||||| |||||||| ||||||||| |||| |||||||||| ||| ||| |||||||||||||||||  |||||||    
T  4022549 ccttttatgataataatttccttttatgatatgtttaaccagtgtcccgggggcaccggttagcaggaccttttaaata 4022471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 35851819 - 35851750
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgcc-ccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |  ||| ||||||||||||||||||    
T  35851819 ttttatggtaataattctcttttatggtatgcttaaccaatgcctcggggggcaccggttagcaggaccc 35851750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 20431555 - 20431630
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaa 94  Q
    |||||||| |||||||| |||||| ||| || ||||||||||||||| | |||||||||| ||| |||||||||||    
T  20431555 cttttatgataataatttccttttttggcatacttaaccagtgccccggagacaccggtttgcatgacccattaaa 20431630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 38590943 - 38590904
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaacca 58  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38590943 cttttatggtaataattcccttttatggtatgcttaacca 38590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 5093609 - 5093540
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| |||||||| |||||||||||||| ||||| |||||||| ||| ||||||||| ||||||||    
T  5093609 ccttttatgataataatttccttttatggtatgtttaactagtgcccc-ggggcaccggttaacaggaccc 5093540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 32860218 - 32860287
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||| | |||| ||||||||    
T  32860218 ccttttatg-taataattctcttttatggtatgcttaaccagtgtcccggggacagctgttaacaggaccc 32860287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 561588 - 561520
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggac 86  Q
    ||||||||  ||||||||| |||||||||||||||||| |||| |||| | | ||||||||||||||||    
T  561588 ccttttataataataattctcttttatggtatgcttaatcagtaccccggaggcaccggttagcaggac 561520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 31782633 - 31782562
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatt 91  Q
    ||||||||||| |||| |||||| | |||||||||||| ||||| | ||| |||||||||||| ||||||||    
T  31782633 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgacccatt 31782562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 45262026 - 45262098
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||| | |||| | ||||||||||||  || ||| ||| |||||||||||| |||||||    
T  45262026 ccttttatggtaataatttcttttttttgtatgcttaacctttgtcccgggggcaccggttagcatgacccat 45262098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 2898197 - 2898256
Alignment:
Q  28 taataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||| ||||||||||||| |||| ||||| ||| | | |||||||||||||||||    
T  2898197 taataattctcttttatggtatgtttaatcagtgtcccggaggcaccggttagcaggacc 2898256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 82
Target Start/End: Original strand, 38591023 - 38591054
Alignment:
Q  51 cttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||||||||||||||||||||||    
T  38591023 cttaaccagtgccccagggacaccggttagca 38591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 27584854 - 27584900
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccc 64  Q
    ||||||||||||||||||| | || ||||||| ||||||||||||||    
T  27584854 ccttttatggtaataattctcattcatggtatacttaaccagtgccc 27584900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 11021291 - 11021259
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgc 51  Q
    ||||| |||||||||||||||||||||||||||    
T  11021291 cttttgtggtaataattcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 29771568 - 29771612
Alignment:
Q  47 tatgcttaaccagtgccccagggacaccggttagcaggacccatt 91  Q
    |||| |||||| ||||||||||| |||||||||||| ||||||||    
T  29771568 tatgtttaacccgtgccccaggggcaccggttagcatgacccatt 29771612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 51065818 - 51065748
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51065818 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccc 51065748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 19010757 - 19010680
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaat 95  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||    
T  19010757 ccttttatggtaataattcccttttatggtatgattaaccagtgccccaggaacaccggttagtaggacccataaaat 19010680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 30294449 - 30294377
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatta 92  Q
    |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  30294449 ttttatggtaataattcccttttatggtatgcttaacctgtgctccggggacaccggttagcaggacccatta 30294377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 5694437 - 5694507
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  5694437 ccttttatggtaataattcccttttatggtatgcttaaccagtgctccgggggcaccggttagcaggaccc 5694507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 47010109 - 47010179
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  47010109 ccttttatggtaataattctcttttatggtatgcttaaccagtgctccaggggcaccggttagcaggaccc 47010179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 29657887 - 29657967
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatatat 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||    
T  29657887 ccttttttggtaataattcccttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccc-ttaaatatat 29657967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 38162966 - 38163035
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  38162966 ccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggacc 38163035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 50128240 - 50128161
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatatata 100  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||||||    
T  50128240 ttttatggtaataattctcttttatggtatgcttaaccagtgtcccagaaacaccggttagcaggaccc-ttaaatatata 50128161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 48383181 - 48383110
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||    
T  48383181 ccttttatggtaataattcccttttatggtatgcttaaccaatgcctcaggggcactggttagcaggaccca 48383110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 15227855 - 15227925
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| |||||    
T  15227855 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagcaagaccc 15227925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 41730424 - 41730502
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  41730424 ccttttatgataataattcccttttatggtatgcttaacaagtgccccagaagcactggttagcaggacccattaaata 41730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 45449314 - 45449244
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||    
T  45449314 ccttttatggtaataattgccttttatggtatgtttaaccagtgccccaggggcatcggttagcaggaccc 45449244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 12072131 - 12072062
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  12072131 cttttatggtaataattcctttttatggtatgcttaaccagtgccccgggggcaccggttagcagcaccc 12072062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 18043279 - 18043348
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  18043279 cttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 18043348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 9266798 - 9266723
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaa 93  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||   |||||||||||||||||||||||    
T  9266798 ccttttatggtaataattcgcttttatggtatacttaaccagtgctccagaagcaccggttagcaggacccattaa 9266723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24178533 - 24178462
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  24178533 ccttttatggtaataatttcattttatggtatgcttaaccagtgccccgggggcaccggttagccggaccca 24178462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 42770060 - 42769990
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  42770060 ccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagaaccc 42769990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28725975 - 28725903
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||| |||| |||||| | |||||||||||||||||||| |||||||||||||||| |||||||    
T  28725975 ccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagacccat 28725903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 52431697 - 52431761
Alignment:
Q  19 cttttatggtaataattcccttttat-ggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||    
T  52431697 cttttatggtaataatttcctttttttggtatgcttaaccagtgccccagggacaccggttagca 52431761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 13961329 - 13961396
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  13961329 ttttatggtaataattttcttttatggtatgcttaaccagtgctccaagggcaccggttagcaggacc 13961396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 14350347 - 14350279
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  14350347 ccttttatggtaataattccctta-atggtatgcttaaccagtgcccc-ggggcaccggttagcaggaccc 14350279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 19031885 - 19031815
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||| | ||||||||||||||||||||    
T  19031885 ccttttatggtaataatttccttttatgatatgcttaacccgtaccccggagacaccggttagcaggaccc 19031815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 45431394 - 45431464
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||||| ||||||||    
T  45431394 ccttttatggtaataattctcttttatgatatacttaaccagtgccccagagactccggttatcaggaccc 45431464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 3784782 - 3784713
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||| ||| ||||||||||| ||||||    
T  3784782 cttttatggtaataatttccttttatggtatgcttaacccgtgtcccgggggcaccggttagccggaccc 3784713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 30657721 - 30657790
Alignment:
Q  21 tttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| | | ||||| ||||||||||||||    
T  30657721 tttatgataataattcccttttatggtatgcttaaccagtaccccggaggcaccgattagcaggacccat 30657790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 3097776 - 3097842
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||| ||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  3097776 cttttatggtaataatttccttttatggtatgcttaaccagt---acggggacaccggttagcaggaccc 3097842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 29210529 - 29210580
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  29210529 ccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 29210580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 47532741 - 47532670
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||||   |||||||||||||| ||||||    
T  47532741 ccttttataataataattcccttttatggtatgcttaaccaatgccccgaagacaccggttagcaagaccca 47532670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12307033 - 12307077
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgc 62  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  12307033 ccttttatggtaataattctcttttatggtatgcttaaccagtgc 12307077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 26228300 - 26228364
Alignment:
Q  24 atggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||  || | || |||||||||||||||| |||||    
T  26228300 atggtaataattcccttttatggtatgcttaactggtactccggggacaccggttagcatgaccc 26228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 38702002 - 38701937
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||    |||||||||||||||||||||||||  || ||||||||||||||||||    
T  38702002 cttttatggtaataattc----ttatggtatgcttaaccagtgccccgagggcaccggttagcaggaccc 38701937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 39497728 - 39497796
Alignment:
Q  27 gtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaat 95  Q
    ||||||||| |||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||| ||||    
T  39497728 gtaataatttccttttattgtatgcttaaccaatgccccagagactccggttagcaagacccatcaaat 39497796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 35985691 - 35985641
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagg 68  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  35985691 ccttttatggtaataattcccatttatagtatacttaaccagtgccccagg 35985641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 51368855 - 51368810
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcc 63  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||    
T  51368855 ccttttatagtaataattccattttatggtatgcttaaccagtgcc 51368810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 8472974 - 8472914
Alignment:
Q  28 taataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| |||||||||||| ||||||||||| |||  ||| |||||||||||||||||    
T  8472974 taataattctcttttatggtatacttaaccagtgtcccgaggataccggttagcaggaccc 8472914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 11797038 - 11796971
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||| | |||||| |||||| |||||| ||||||||| ||||||||||||||| |||||    
T  11797038 ttttatggtaataacttccttttttggtatccttaactagtgcccca-ggacaccggttagcatgaccc 11796971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 17333352 - 17333284
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| ||||| |||||||||||||||  |||||||| |||||| | | ||||||||||||||||||    
T  17333352 ccttttatgataatacttcccttttatggta--cttaaccaatgccccggaggcaccggttagcaggaccc 17333284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 21112732 - 21112681
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||| ||||||||  || ||||||||||||||||||    
T  21112732 ccttttatggtatgcttaactagtgccccgagggcaccggttagcaggaccc 21112681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 30217879 - 30217948
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||| | | |||| |||||||||||||||    
T  30217879 cttttatggtaataatttctttttatggtatgcttaa-cagtgcccc-gaggcacctgttagcaggacccat 30217948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 36446395 - 36446352
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
T  36446395 ccttttatagtaataattcccttttatggtatgtttaaccagtg 36446352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 43286838 - 43286881
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  43286838 ccttttatagtaataattctcttttatggtatgcttaaccagtg 43286881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 48071598 - 48071668
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||||||||||||  ||||||| |||||||||||| |||| ||| | |||||||| |||||||||||    
T  48071598 ccttttatggtaataattatcttttatagtatgcttaaccggtgctcca-gaacaccggtcagcaggaccca 48071668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 29683314 - 29683355
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  29683314 ttttatagtaataattcacttttatggtatgcttaaccagtg 29683355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30664237 - 30664164
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatt 91  Q
    ||||||||||||| |||| | |||| | ||||||||||||||||||||  || |||||||||||| ||| ||||    
T  30664237 ccttttatggtaagaatttcttttttttgtatgcttaaccagtgccccgtgggcaccggttagcatgactcatt 30664164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 38595822 - 38595749
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatt 91  Q
    ||||||||||||| ||||  ||||| | | |||||||||||||||||| | | |||||||||||| ||||||||    
T  38595822 ccttttatggtaagaattttctttttttgcatgcttaaccagtgccccggaggcaccggttagcatgacccatt 38595749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 6770455 - 6770495
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagt 60  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  6770455 ttttatgataataattcccttttatgatatgcttaaccagt 6770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 23473534 - 23473462
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||| | ||||||  ||||||||||| |||| ||  ||  |||||||||||||||||||    
T  23473534 ccttttatggtaataatttctttttataatatgcttaacctgtgctccgagggtaccggttagcaggacccat 23473462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 21117474 - 21117423
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||  |||||||  || ||||||||||||||||||    
T  21117474 ccttttatggtatgcttaacttgtgccccgagggcaccggttagcaggaccc 21117423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 52749720 - 52749757
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaacc 57  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  52749720 ttttatggtaataattcctttttatggtatgtttaacc 52749757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 23822591 - 23822522
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||||||| ||||   |||| | ||||||||||||| |||||| ||| |||||||||||| ||||||    
T  23822591 ccttttatggtaagaattt--tttttttgtatgcttaaccaatgccccgggggcaccggttagcatgaccca 23822522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 24438593 - 24438665
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24438593 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccat 24438665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 4628683 - 4628753
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  4628683 cttttatggtaataattcccttttatggtatgcttaaccagtgccttaggggcaccggttagcaggaccca 4628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 29993557 - 29993481
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| | | || |||||||||||||||||||||    
T  29993557 ccttttatggtaataattcccttttatggtatgcttaaccagtgtcccggaggcatcggttagcaggacccattaaa 29993481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24798473 - 24798402
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||    
T  24798473 ccttttatggtaataattcccttttatagtatgcttaaccagtgccccgggggcaccagttagcaggaccca 24798402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 12218506 - 12218437
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  12218506 ccttttatggtaataattctcttttatggtatgtttaaccagtgcccc-gggacaccggttagcaggaccc 12218437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 13064946 - 13064876
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||    
T  13064946 ccttttatggtaataattcccttttatggtatgcttaaccagtgctctaggggcaccggttagcagaaccc 13064876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 5239403 - 5239473
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||||||||||    
T  5239403 ttttatggtaataattcccttttatggtatgcttaacttgtgcccccggggcactggttagcaggacccat 5239473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 34333399 - 34333469
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||| ||| ||||||||||||||||||    
T  34333399 ccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 34333469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 34606377 - 34606447
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| ||  ||||||||||||||||||    
T  34606377 ccttttatggtaataattaccttttatggtatgcttaacccgtgccccgggagcaccggttagcaggaccc 34606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 42044362 - 42044294
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||    
T  42044362 cttttatggtaataattcccttttatggtatgtttaaccagtgcccc-ggggcaccggttagcatgaccc 42044294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 38128408 - 38128488
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatata 98  Q
    ||||||||||||| |||| |||||| | |||||||||||||||||||| | | |||||||||||| ||||| |||||||||    
T  38128408 ccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccctttaaatata 38128488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 28588026 - 28588093
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggac 86  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||| || ||| |||||||||||||    
T  28588026 cttttatggtaataattcccttttatggtatgtttaaccaataccccgggaacatcggttagcaggac 28588093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 45045886 - 45045933
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45045886 ccttttatgataataattcccttttatggtatgcttaaccagtgcccc 45045933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 18486077 - 18486143
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcagg 84  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||   ||||||||||||||||    
T  18486077 ccttttatggtaataatttcattttatggtatgcttaacccgtgccccgaagacaccggttagcagg 18486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 30810772 - 30810841
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||  ||||||||||||| ||||||| ||||||||||  ||||||||| |||||||    
T  30810772 cttttatggtaataattttcttttatggtatgtttaaccaatgccccaggggtaccggttagtaggaccc 30810841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 47657096 - 47657139
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgcc 63  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  47657096 ttttatggtaataattcccttttatggtatgcttaatcagtgcc 47657139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 47839608 - 47839655
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||    
T  47839608 ccttttatggtaataattcccttttatggtatgaataaccagtgcccc 47839655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 23363237 - 23363167
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||    |||||| ||||||||||||    
T  23363237 ccttttatggtaatatttctcttttatggtatgtttaaccagtgccccgaaaacaccgattagcaggaccc 23363167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 7689269 - 7689224
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccc 64  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  7689269 cttttatggtaataattctcttttatggtatacttaaccagtgccc 7689224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 5729463 - 5729531
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||| | | | ||| |||||||||||||    
T  5729463 cttttatagtaataattctcttttatggcatgcttaaccagtgcctcggaggcacaggttagcaggacc 5729531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 525145 - 525075
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||||||||||||| |||||||| |||| ||||||||| | || ||  |||||||||||||||||||    
T  525145 ccttttatggtaataattctcttttatgatatgtttaaccagtactcc-ggagcaccggttagcaggaccca 525075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 33636570 - 33636613
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgcc 63  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  33636570 ttttatggtaataattctattttatggtatgcttaaccagtgcc 33636613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 23357777 - 23357711
Alignment:
Q  21 tttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    |||||| ||||||||| ||| |||| ||||||||||||||||||| | ||||||| |||||| ||||    
T  23357777 tttatgataataattctcttctatgatatgcttaaccagtgccccggagacaccgattagcaagacc 23357711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 29835771 - 29835702
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||  ||||||||||||||||| | ||||| | || |||||||||||| ||||||||    
T  29835771 ttttatggtaataattctattttatggtatgcttaa-ctgtgcctcgggaacaccggttagcgggacccat 29835702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 46716754 - 46716824
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||| ||   ||  ||||||||||||||||    
T  46716754 ccttttatgataataattcccttttatggtatgtttaaccggtgctccgaagatcccggttagcaggaccc 46716824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 47083171 - 47083232
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttag 80  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||| || ||| ||||||||||    
T  47083171 ccttttatggtaataattcccttttatgatatgtttaaccaatgctcc-ggggcaccggttag 47083232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 8754653 - 8754608
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||    
T  8754653 ttttatggtaataatttccttttatggtatgcttaactagtacccc 8754608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 6820032 - 6820099
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||| |||||| | | || |||||||||||||| |||| |||||||||||| |||||    
T  6820032 ttttatggtaataattaccttttttagcatccttaaccagtgccctaggg-caccggttagcatgaccc 6820099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 18117261 - 18117305
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccc 64  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||    
T  18117261 ttttatagtaataatttcattttatggtatgcttaaccagtgccc 18117305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 11686390 - 11686324
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||||||||||| |||||||| ||||||||||| ||  ||| | | |||||||||||||||||    
T  11686390 ttttatggtaataattctcttttatgatatgcttaacctgt-acccggaggcaccggttagcaggacc 11686324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 34546383 - 34546336
Alignment:
Q  38 cttttatggtatgcttaaccagtgccccagggacaccggttagcagga 85  Q
    |||||||||||| ||||| ||||||||||| | |||||||||||||||    
T  34546383 cttttatggtatacttaatcagtgccccagaggcaccggttagcagga 34546336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 43594102 - 43594063
Alignment:
Q  22 ttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  43594102 ttatgataataattctcttttatggtatgcttaaccagtg 43594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 1737099 - 1737160
Alignment:
Q  21 tttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcag 83  Q
    |||||| |||||||||  ||||||||||||||||||||||||||| |   |||||||||||||    
T  1737099 tttatgataataattca-ttttatggtatgcttaaccagtgccccggaagcaccggttagcag 1737160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 6097453 - 6097531
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||||||||| |||| |||||| |  ||||||||||| ||||||| | | ||| |||||||| ||||||| |||||    
T  6097453 ccttttatggtaagaatttcctttttttatatgcttaacccgtgccccggaggcactggttagcatgacccataaaata 6097531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 28262142 - 28262188
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccc 64  Q
    |||||||| ||||||||||  |||||||||||||||||||| |||||    
T  28262142 ccttttatagtaataattcttttttatggtatgcttaaccaatgccc 28262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 34556959 - 34556892
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||| ||||| |||| |||||| | |||||||||||||||||||  ||| |||||||||||| |||||    
T  34556959 cttttagggtaagaatttcctttttttgtatgcttaaccagtgccc--ggggcaccggttagcatgaccc 34556892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 37674153 - 37674106
Alignment:
Q  39 ttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  37674153 ttttatggtatgcttaaccagtgtcc--ggggcaccggttagcaggaccc 37674106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 13106350 - 13106310
Alignment:
Q  51 cttaaccagtgccccagggacaccggttagcaggacccatta 92  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  13106350 cttaaccagtgcccc-gggacaccggttagcatgacccatta 13106310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 19434610 - 19434689
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatata 98  Q
    ||||||||||||| ||||  ||||| | |||||||||||||||| ||| ||| ||||||| |||| ||||| | |||||||    
T  19434610 ccttttatggtaagaattttctttttttgtatgcttaaccagtg-cccgggggcaccggtcagcatgacccttaaaatata 19434689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 34228798 - 34228869
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  34228798 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccca 34228869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 4537814 - 4537744
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  4537814 ccttttatggtaataattcccttttatggtatgcttaacctgtgccccagaggcaccggttagcaggaccc 4537744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 30675642 - 30675574
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30675642 ccttttatggtaataattcc-ttttatggtatgcttaaccagtgccccggggacaccggttagcaggacc 30675574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 20831623 - 20831551
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  20831623 ccttttatggtaataattctcttttatggtatgcttaatcagtgctcccgggacaccggttagcaggacccat 20831551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 168582 - 168652
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  168582 ccttttatggtaataattccattttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 168652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 2805330 - 2805260
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| ||||||    
T  2805330 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagccggaccc 2805260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 13643127 - 13643197
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  13643127 ccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggaccc 13643197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 13743552 - 13743622
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  13743552 ccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggaccc 13743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 16888614 - 16888536
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||| ||| |||||||||||||||||||| |||||    
T  16888614 ccttttatggtaataattctcttttgtggtatgcttaaccaatgccccgggggcaccggttagcaggacccatcaaata 16888536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 27988569 - 27988500
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  27988569 ccttttatggtaataattcccttttatggtatgcttaaccagtg-cccgggggcaccggttagcaggaccc 27988500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 28045871 - 28045802
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  28045871 ccttttatggtaataattcccttttatggtatgcttaaccagtg-cccgggggcaccggttagcaggaccc 28045802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 42035050 - 42034981
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  42035050 cttttatggtaataattcccttttatggtatgcttaacacgtgccccagagacaccggttagcgggaccc 42034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 16394131 - 16394060
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  16394131 ccttttatgctaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccca 16394060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 9537892 - 9537822
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  9537892 ttttatagtaataatttccttttatggtatgcttaaccagtgtcccggagacaccggttagcaggacccat 9537822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 16890550 - 16890482
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggac 86  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| | ||| ||||||||||||||||    
T  16890550 ccttttatggtaataattcctttttatggtatgcttaaccggtgcctccggggcaccggttagcaggac 16890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 32114025 - 32114095
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||| |||| | ||||||||||||||||||    
T  32114025 ccttttatgataataattcccttttatagtatgtttaaccagtgctccagagccaccggttagcaggaccc 32114095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 9063121 - 9063052
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| |   ||||||||||||||||||    
T  9063121 cttttatggtaataattcccttttgtgatatgcttaaccagtgccccggaagcaccggttagcaggaccc 9063052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 9253972 - 9253907
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcag 83  Q
    |||||||| |||||||||| ||||||||||||||||||||| || ||||||| |||||||||||||    
T  9253972 ccttttatagtaataattctcttttatggtatgcttaaccaatgtcccaggggcaccggttagcag 9253907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 7304588 - 7304516
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||  |||||||| ||||||||||||||||||||||||| || ||| |||||||||| |||||||||    
T  7304588 ccttttatgaaaataattctcttttatggtatgcttaaccagtgctccgggggcaccggttagtaggacccat 7304516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 21595962 - 21596025
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagc 81  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | ||||| |||||||    
T  21595962 ccttttatggtattaattcccttttatggtatgcttaaccagtgtcccggagacactggttagc 21596025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 43119334 - 43119403
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||| ||||||| ||||||||||||||||||||| || ||| ||| |||||||||||||||||||    
T  43119334 cttttatggtgataattctcttttatggtatgcttaaccaatggccc-ggggcaccggttagcaggaccca 43119403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 11112756 - 11112825
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||  ||| ||| ||||||||||||||    
T  11112756 cttttatgataataattcacttttatggtatgcttaacctgtgccctgggggcactggttagcaggaccc 11112825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 12203970 - 12204031
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggtta 79  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||| ||||||    
T  12203970 ccttttatgataataattcccttttatggtatgctgaaccagtgtcccggggacatcggtta 12204031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 12448398 - 12448459
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggtta 79  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||| ||||||    
T  12448398 ccttttatgataataattcccttttatggtatgctgaaccagtgtcccggggacatcggtta 12448459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 29444209 - 29444140
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||| | | ||||| ||| ||||||||    
T  29444209 cttttatggtaataattcccttttatggtatgtttaaccagtgtcccggaggcaccgattaacaggaccc 29444140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 39406958 - 39407024
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggac 86  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||||||  || ||||||||||||||||    
T  39406958 ccttttatgataataattcccttttatggtatgtttaactagtgcccc--gggcaccggttagcaggac 39407024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 29235351 - 29235423
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||| |||||||| |||||||| | |||||||||||||| ||| || ||||||||||||| |||||||    
T  29235351 ccttttatgataataatttccttttataggatgcttaaccagtgtcccgggaacaccggttagcatgacccat 29235423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 33357199 - 33357152
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  33357199 ccttttatggtaataattctcttttatggtatgcttaactagtgcccc 33357152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 3930303 - 3930233
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||| || |||||||| ||||||||| ||||||||||||||||||||||  || || ||||||||||||    
T  3930303 ccttttttgataataatttccttttatgatatgcttaaccagtgccccaggagcatcgattagcaggaccc 3930233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 43714258 - 43714188
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||| ||||   |||| | |||||||||||||||||||| |||||||||||||||| |||||    
T  43714258 ccttttatggtaaaaatttattttttttgtatgcttaaccagtgcccccgggacaccggttagcatgaccc 43714188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 37373322 - 37373378
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccg 75  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| ||| | |||||||    
T  37373322 cttttatggtaataattccctttcatggtatgcttaacccgtgtcccggagacaccg 37373378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 10618125 - 10618184
Alignment:
Q  29 aataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||| ||||||||||||||||||||| ||| | | ||| ||||||||||||||||||    
T  10618125 aataattaccttttatggtatgcttaacccgtgtctccggggcaccggttagcaggaccc 10618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 28626886 - 28626950
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccaggga-caccggttagcagga 85  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||  |||| |||||||||||||||    
T  28626886 ttttatgataataattcccttttatggtatgcttaatcagtgtcc--gggagcaccggttagcagga 28626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 36730560 - 36730607
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  36730560 ccttttatggtaataattctcttttatagtatgcttaacctgtgcccc 36730607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 2490225 - 2490157
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||| |||| |||||| | |||||||||||| ||||| | ||| |||||||||||| |||||    
T  2490225 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgaccc 2490157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 4648316 - 4648352
Alignment:
Q  24 atggtaataattcccttttatggtatgcttaaccagt 60  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4648316 atggtaataattcccttttatgatatgcttaaccagt 4648352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 40831394 - 40831465
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||  ||||||| |||||| ||| | || |||  | ||||||||||||||||||||||    
T  40831394 cttttatggtaataattttcttttatagtatgcataatctgtaccctggagacaccggttagcaggacccat 40831465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 39751541 - 39751496
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcc 63  Q
    ||||||||||||| |||| |||||| | ||||||||||||||||||    
T  39751541 ccttttatggtaagaatttcctttttttgtatgcttaaccagtgcc 39751496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 22956821 - 22956902
Alignment:
Q  18 ccttttatggtaataattccc--ttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatatat 99  Q
    ||||||||||||| |||||||  |||||||||||| ||||  ||||||| |  ||||||||||| |||||||| ||||||||||    
T  22956821 ccttttatggtaaaaattcccttttttatggtatgtttaataagtgcccga-agacaccggttaacaggaccc-ttaaatatat 22956902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 39206303 - 39206363
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggtta 79  Q
    |||||||| ||| |||| |||||| | |||||||||||| ||||||| ||| |||||||||    
T  39206303 cttttatgataaaaatttcctttttttgtatgcttaaccggtgcccccggggcaccggtta 39206363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 32929578 - 32929508
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  32929578 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 32929508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 3515882 - 3515954
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  3515882 ccttttatggtaataattcccttttatggtatgtttaacctgtgccccaggggcaccggttagcaggacccat 3515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 392212 - 392282
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  392212 ccttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 392282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 12525837 - 12525905
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  12525837 ttttatggtaataattcccttttatgatatgcttaactagtgccccagggataccggttagcaggaccc 12525905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 1391247 - 1391177
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  1391247 cttttatgataataattcccttttatggtatgcttaaccagtgttccaggaacaccggttagcaggaccca 1391177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 4215811 - 4215881
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  4215811 ccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccc 4215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 32985263 - 32985193
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  32985263 ccttttatgataataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagaaccc 32985193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7851229 - 7851153
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaa 94  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| || ||||||||||||||  ||||||||||    
T  7851229 ccttttatggtaataattcccttttatggtatgcttaactcgtgccctagagacaccggttagcaacacccattaaa 7851153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 2581068 - 2581138
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| ||  ||||||||||||||||||    
T  2581068 ccttttatggtaataattcccttttatggtatgcttaaccaataccccgggagcaccggttagcaggaccc 2581138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 23402254 - 23402324
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| | | ||||||||||||||||||    
T  23402254 ccttttatggtaataattaccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 23402324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 2350768 - 2350832
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||    
T  2350768 ccttttatggtaataattcccttttatgatatgcttaaccagtaccccggagacaccggttagca 2350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 18276685 - 18276612
Alignment:
Q  18 ccttttatggtaataattcccttttatggtat---gcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||| |||||||||||||   |||||||||||||||| ||| ||||||||||||||||||    
T  18276685 ccttttatggtaataatttccttttatggtattatgcttaaccagtgcccctggggcaccggttagcaggaccc 18276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 26467194 - 26467124
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| | | |||||||||||| |||||    
T  26467194 ccttttatggtaataattcccttttatggtatgtctaaccagtgccccggaggcaccggttagcatgaccc 26467124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 27433608 - 27433678
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||| ||| |||||||||||| |||||    
T  27433608 ccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 27433678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 35044006 - 35044075
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || ||||||    
T  35044006 cttttatggtaataattctcttttatggtatgcttaaccagtgcccc-ggggcaccggttaacatgaccca 35044075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 11115166 - 11115106
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttag 80  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  11115166 cttttatggtaataattcccttttatgatatgtttaaccagtgcccc-gggacaccggttag 11115106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 12145187 - 12145115
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||| || | | ||||||||||||||||||||    
T  12145187 ccttttatgataataatttccttttatagtatgcttaaccagtgctccggaggcaccggttagcaggacccat 12145115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 29978350 - 29978417
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||| || |||||||||||||||||||    
T  29978350 ttttatggtaataattcccttttatgatatgcttaaccagcg-ccctggaacaccggttagcaggaccc 29978417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 1840317 - 1840247
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||| ||  ||||||||||||| |||||    
T  1840317 cctttcatggtaataattcccttttatgatatgtttaaccagtgccctagaaacaccggttagcaagaccc 1840247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 34706837 - 34706907
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||| |||| |||||| | |||||||||||||||||||| ||| |||||||||||| |||||    
T  34706837 ccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagcaagaccc 34706907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 29451185 - 29451138
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  29451185 ccttttatgataataattcccttttatggtatgcttaacccgtgcccc 29451138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 5323516 - 5323562
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccc 64  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  5323516 ccttttatggtaataattcccttttatggtatgcgtaaccggtgccc 5323562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 3026078 - 3026013
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcagg 84  Q
    ||||||| |||||||||| |||||||||||||||||| ||||| |||  || ||||||||||||||    
T  3026078 cttttatcgtaataattctcttttatggtatgcttaatcagtgtcccgagggcaccggttagcagg 3026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 21878415 - 21878353
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||      ||||| ||||||||||||||||| |||||||||||||||||||    
T  21878415 ttttatggtaataattccct------gtatgtttaaccagtgccccaggaacaccggttagcaggaccc 21878353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 22417309 - 22417362
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggac 71  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||    
T  22417309 ccttttatgctaataattctcttttatggtatgcttaatcagtgccccggggac 22417362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 20898064 - 20898117
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatt 91  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||| |||||||||    
T  20898064 ccttttatggtatgcttaacctgtgcccc-ggggcaccggttagccggacccatt 20898117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 28225337 - 28225379
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  28225337 cttttatggtaataattcccttttatggtatccttaaacagtg 28225379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 34851919 - 34851849
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||| |||||||||| |||||||  |||||||||||||||  || | ||||||| ||||||||||||    
T  34851919 ccttttatagtaataattctcttttataatatgcttaaccagtgttccggtgacaccgattagcaggaccc 34851849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13417028 - 13416983
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccc 64  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||    
T  13417028 cttttatggtaataattctcttttataatatgcttaaccagtgccc 13416983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 25165482 - 25165413
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||| ||||||||| |||||| | |||||||||||| |||||  ||  ||||||||||||||||||    
T  25165482 cttttatgataataattctcttttacgatatgcttaaccaatgccctgggagcaccggttagcaggaccc 25165413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 34712195 - 34712131
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||| |||| || ||| | ||||||||||| |||||||| ||| ||||||||||||    
T  34712195 ccttttatggtaagaatttccattttttgtatgcttaactagtgccccgggggcaccggttagca 34712131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 961125 - 961164
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaacc 57  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  961125 ccttttatgataataattctcttttatggtatgcttaacc 961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 34477620 - 34477569
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||||||||||    
T  34477620 ccttttatggtatgcttaacccgtgccccggaggtaccggttagcaggaccc 34477569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 11616182 - 11616141
Alignment:
Q  38 cttttatggtatgcttaaccagtgccccagggacaccggtta 79  Q
    ||||| |||||| |||||||||||| ||||||||||||||||    
T  11616182 cttttgtggtattcttaaccagtgctccagggacaccggtta 11616141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 1127934 - 1127994
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttag 80  Q
    ||||||||||| ||||  ||||| | ||||||||||||||||||||  || ||||||||||    
T  1127934 ttttatggtaagaattttctttttttgtatgcttaaccagtgccccgagggcaccggttag 1127994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 11958037 - 11957967
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  11958037 ccttttatggtaataattcccttttatggcatgcttaaccagtgccccaggggcaccggttagcaggaccc 11957967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 34650903 - 34650833
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  34650903 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 34650833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 31467836 - 31467908
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||||    
T  31467836 ccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccagggacaccggttagcaagacccat 31467908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 35132640 - 35132712
Alignment:
Q  21 tttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaa 93  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||    
T  35132640 tttatggtaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccctttaa 35132712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 8787455 - 8787525
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  8787455 ccttttatgataataattccattttatggtatgcttaacctgtgccccgggggcaccggttagcaggaccc 8787525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 13661924 - 13661994
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| | | ||||||||||||||||||    
T  13661924 ccttttatggtaataattctcttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 13661994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 10054423 - 10054351
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||| |||  |||||||||||||||||||    
T  10054423 ccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggtaccggttagcaggacccat 10054351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 40564472 - 40564404
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||| || ||||||||||||||||||    
T  40564472 ttttatggtaataattctcttttatggtatgcttaaccaataccccaagggcaccggttagcaggaccc 40564404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 6283679 - 6283742
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||    
T  6283679 cttttatggtaataattcatttttatggtatgcttaaccagtgccctaggggcaccggttagca 6283742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 11846188 - 11846258
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||  || ||  ||||||||||||||    
T  11846188 ccttttatggtaataaatcccttttatagtatgcttaaccagtgcccctagggcatgggttagcaggaccc 11846258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 21547454 - 21547392
Alignment:
Q  28 taataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    ||||||||| | ||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  21547454 taataattctcatttatggtatgcttaaccagtaccccggagacaccggttagcaggacccat 21547392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 35504310 - 35504241
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||| ||||||||||||||||||||||||||||| |||  || ||| ||||||||||||||||||    
T  35504310 ccttttatggcaataattcccttttatggtatgcttaacccgtg-tccgggggcaccggttagcaggaccc 35504241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 10070086 - 10070144
Alignment:
Q  39 ttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaatat 97  Q
    |||||||||||||||||||| || ||||||  |||||||||||||||||| ||||||||    
T  10070086 ttttatggtatgcttaaccaatgtcccaggagcaccggttagcaggaccctttaaatat 10070144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 12506412 - 12506462
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagg 68  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  12506412 ccttttatagtaataattctcttttatggaatgcttaaccagtgccccagg 12506462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 19647728 - 19647671
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaa 94  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||| ||||    
T  19647728 ccttttatggtatgcttaacccgtgccccgggggcaccggttagccggacccaataaa 19647671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 10956009 - 10955974
Alignment:
Q  30 ataattcccttttatggtatgcttaaccagtgcccc 65  Q
    ||||||||||||||||||||||||||||||||||||    
T  10956009 ataattcccttttatggtatgcttaaccagtgcccc 10955974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 10956067 - 10956114
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgcccc 65  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  10956067 ccttttatggtaataatttccttttatgatatgcttaaccagtacccc 10956114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 8927593 - 8927556
Alignment:
Q  51 cttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8927593 cttaaccagtgccccaggggcaccggttagcaggaccc 8927556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 9721676 - 9721604
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccatta 92  Q
    |||||||| ||||||||||||||||||||||| ||||    ||| |||||| |||||||||||| |||||||||    
T  9721676 cttttatgataataattcccttttatggtatgtttaattcatgcaccaggg-caccggttagcatgacccatta 9721604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 40057424 - 40057501
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||| |||||| |||||||||||| | || |||||||||| ||  | | |||||||||||||||||||| |||||    
T  40057424 cttttatagtaatatttcccttttatgatgtgtttaaccagtgacctcgaggcaccggttagcaggacccataaaata 40057501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14214119 - 14214055
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    ||||||||||||| |||| |||||| | |||||||||||| ||| ||| ||| ||||||||||||    
T  14214119 ccttttatggtaagaatttcctttttttgtatgcttaaccggtgtcccgggggcaccggttagca 14214055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 20175344 - 20175406
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagca 82  Q
    |||||||| |||||||||||||||||  |||||||||| |||| | | ||||||||||||||||    
T  20175344 cttttatgataataattcccttttataatatgcttaactagtg-ctctgggacaccggttagca 20175406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 4268677 - 4268739
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttag 80  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||| ||  ||| ||||||||||    
T  4268677 ccttttatggtaataattttcttttttggtatgcttaacccgtgtccagggggcaccggttag 4268739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 19436906 - 19436865
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    ||||||||||||||||| ||||||||||||| || |||||||    
T  19436906 ttttatggtaataattctcttttatggtatgtttcaccagtg 19436865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 10826 - 10904
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaaata 96  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | ||| || |||||||||||||||||||||||    
T  10826 ccttttatggtaataattcccatttatggtatgcttaaccagtgcctcgggggcagcggttagcaggacccattaaata 10904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 15012 - 15084
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccat 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  15012 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcactggttaacaggacccat 15084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 23077 - 23147
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  23077 ccttttatgttaataattctcttttatggtatgtttaaccagtgccccaaggacaccggttagcaagaccc 23147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 6180 - 6110
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||    
T  6180 ccttttatggtaataatccccttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccc 6110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 116320 - 116390
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| ||||    
T  116320 ccttttatgataataattcccttttatggtatgtttaacccgtgccccagggataccggttagcagtaccc 116390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 941 - 1004
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagc 81  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  941 ccttttatagtaataattctcttttatggtatgcttaaccagtgccctaaggacaccggttagc 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 41035 - 41110
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacccattaa 93  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||| ||| | |||||||||| ||||||||||||||    
T  41035 ccttttatgataataatttccttttatgatatgcttaaccagtgtcccggagacaccggttggcaggacccattaa 41110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 53755 - 53685
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||| ||| |||||||||||| |||||    
T  53755 ccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagaccc 53685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 68360 - 68289
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||   | || ||||||||||||||||    
T  68360 ccttttaaggtaataattcccttttatggtatgcttaaccagtaccccgaaggcatcggttagcaggaccca 68289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 95654 - 95585
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||||||||||||||||||||||||| |||||| ||  ||||||| | |||||||| |||||||    
T  95654 cttttatggtaataattcccttttatggtatgtttaaccggtatcccaggggctccggttaggaggaccc 95585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 53417 - 53358
Alignment:
Q  28 taataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggacc 87  Q
    ||||||||| ||||||||||||||||||| |||||||| | | |||||||||||||||||    
T  53417 taataattctcttttatggtatgcttaactagtgccccggaggcaccggttagcaggacc 53358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 25835 - 25877
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtg 61  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  25835 cttttatggtaataattcccttttatggtatccttaaacagtg 25877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 233969 - 234039
Alignment:
Q  18 ccttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    |||||||||  ||||||| |||||||||||||| |||||| || | || ||| ||||||||||||||||||    
T  233969 ccttttatgaaaataatttccttttatggtatgtttaaccggtactccgggggcaccggttagcaggaccc 234039  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 69344 - 69411
Alignment:
Q  20 ttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||| |||||||||| | ||||||||||||||||||||||||| | ||  |||||||||| |||||||    
T  69344 ttttaaggtaataatttc-ttttatggtatgcttaaccagtgcctcgggagcaccggttagaaggaccc 69411  T

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Target: scaffold0674 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 7967 - 7916
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||||||||||    
T  7967 ccttttatggtatgcttaacccgtgccccggaggtaccggttagcaggaccc 7916  T

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Target: scaffold0549 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 7404 - 7455
Alignment:
Q  37 ccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccc 88  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||||||||||    
T  7404 ccttttatggtatgcttaacccgtgccccggaggtaccggttagcaggaccc 7455  T

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Target: scaffold1152 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 795 - 864
Alignment:
Q  19 cttttatggtaataattcccttttatggtatgcttaaccagtgccccagggacaccggttagcaggaccca 89  Q
    |||||||||| ||||||| ||||||||||||||||||| | |  ||| ||| |||||||||| ||||||||    
T  795 cttttatggtgataattctcttttatggtatgcttaactaatagccc-ggggcaccggttagtaggaccca 864  T

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