View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14459_low_12 (Length: 309)
Name: NF14459_low_12
Description: NF14459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14459_low_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 14 - 309
Target Start/End: Original strand, 8925476 - 8925773
Alignment:
| Q |
14 |
caaagggcataaacgaaggaattgaagattaaaactttaaaatatagtctttatgacatgaactggatgacatgcggacaattacaaagacttatctctt |
113 |
Q |
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| T |
8925476 |
caaagggcataaacgaaggaattgaagattaaaactttaaaatatagtctttatgacatgaactggatgacatgcggacaactacaaagacttatctctt |
8925575 |
T |
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| Q |
114 |
tagttaagttggactacataggtggaaaaaatatttaatatgattaatgaattgcatgatatattttataataaaaaacattatttgtttctttataatt |
213 |
Q |
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| T |
8925576 |
tagttaagtcggactacataggtggaaaaaatatttaatatgattaatgtattgcatgatatattttataataaaaaacattatttgtttctttataatt |
8925675 |
T |
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| Q |
214 |
g--tttatgaacaacaacaattttatattttgaaatgataaaaatcacataaaataaattaatataagcaaaactaaatccagtcatttataggcatc |
309 |
Q |
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| T |
8925676 |
gtttttatggacaacaacaattttatattttgaaatgataaaaatcacataaaataaattaatataagcaaaacaaaatccagtcatttataggcatc |
8925773 |
T |
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