View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14460_low_15 (Length: 361)

Name: NF14460_low_15
Description: NF14460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14460_low_15
NF14460_low_15
[»] chr5 (25 HSPs)
chr5 (92-351)||(42617372-42617616)
chr5 (1-32)||(2301520-2301551)
chr5 (1-32)||(2848303-2848334)
chr5 (1-32)||(4745825-4745856)
chr5 (1-32)||(8968839-8968870)
chr5 (1-32)||(9835123-9835154)
chr5 (1-32)||(10404217-10404248)
chr5 (1-32)||(11188631-11188662)
chr5 (1-32)||(11795583-11795614)
chr5 (1-32)||(12463846-12463877)
chr5 (1-32)||(17545121-17545152)
chr5 (1-32)||(21749327-21749358)
chr5 (1-32)||(22569194-22569225)
chr5 (1-32)||(25400316-25400347)
chr5 (1-32)||(25648033-25648064)
chr5 (1-32)||(27765347-27765378)
chr5 (1-32)||(28308324-28308355)
chr5 (1-32)||(29691447-29691478)
chr5 (1-32)||(35515602-35515633)
chr5 (1-32)||(36735962-36735993)
chr5 (1-32)||(39919050-39919081)
chr5 (1-31)||(10804179-10804209)
chr5 (1-30)||(5908270-5908299)
chr5 (4-32)||(9125754-9125782)
chr5 (4-32)||(18597501-18597529)
[»] scaffold1213 (1 HSPs)
scaffold1213 (1-32)||(594-625)
[»] scaffold1185 (1 HSPs)
scaffold1185 (1-32)||(2342-2373)
[»] scaffold1088 (1 HSPs)
scaffold1088 (1-32)||(2910-2941)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-32)||(3756-3787)
[»] scaffold0608 (1 HSPs)
scaffold0608 (1-32)||(9056-9087)
[»] scaffold0460 (1 HSPs)
scaffold0460 (1-32)||(12549-12580)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-32)||(3963-3994)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-32)||(17210-17241)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-32)||(17710-17741)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-32)||(10775-10806)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-32)||(112198-112229)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-32)||(12210-12241)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-32)||(266654-266685)
[»] chr8 (41 HSPs)
chr8 (1-32)||(257629-257660)
chr8 (1-32)||(658260-658291)
chr8 (1-32)||(843996-844027)
chr8 (1-32)||(1937400-1937431)
chr8 (1-32)||(2787030-2787061)
chr8 (1-32)||(3189908-3189939)
chr8 (1-32)||(7816493-7816524)
chr8 (1-32)||(8265358-8265389)
chr8 (1-32)||(9187172-9187203)
chr8 (1-32)||(10568175-10568206)
chr8 (1-32)||(10736823-10736854)
chr8 (1-32)||(10761909-10761940)
chr8 (1-32)||(11127992-11128023)
chr8 (1-32)||(16432077-16432108)
chr8 (1-32)||(16449215-16449246)
chr8 (1-32)||(17027830-17027861)
chr8 (1-32)||(17072512-17072543)
chr8 (1-32)||(17558266-17558297)
chr8 (1-32)||(17575728-17575759)
chr8 (1-32)||(17698612-17698643)
chr8 (1-32)||(22274561-22274592)
chr8 (1-32)||(23178840-23178871)
chr8 (1-32)||(28420373-28420404)
chr8 (1-32)||(28909555-28909586)
chr8 (1-32)||(29514716-29514747)
chr8 (1-32)||(29733954-29733985)
chr8 (1-32)||(31450906-31450937)
chr8 (1-32)||(33838414-33838445)
chr8 (1-32)||(34266102-34266133)
chr8 (1-32)||(34894459-34894490)
chr8 (1-32)||(37717453-37717484)
chr8 (1-32)||(38219517-38219548)
chr8 (1-32)||(39169575-39169606)
chr8 (1-32)||(39587637-39587668)
chr8 (1-32)||(43186943-43186974)
chr8 (1-31)||(37291012-37291042)
chr8 (1-30)||(43847024-43847053)
chr8 (4-32)||(2908041-2908069)
chr8 (4-32)||(5328516-5328544)
chr8 (4-32)||(21548446-21548474)
chr8 (4-32)||(31712641-31712669)
[»] chr7 (28 HSPs)
chr7 (1-32)||(3062864-3062895)
chr7 (1-32)||(4960874-4960905)
chr7 (1-32)||(9697840-9697871)
chr7 (1-32)||(10244838-10244869)
chr7 (1-32)||(12640538-12640569)
chr7 (1-32)||(12772205-12772236)
chr7 (1-32)||(13720860-13720891)
chr7 (1-32)||(15238979-15239010)
chr7 (1-32)||(19331449-19331480)
chr7 (1-32)||(21762841-21762872)
chr7 (1-32)||(24508916-24508947)
chr7 (1-32)||(24781120-24781151)
chr7 (1-32)||(26801678-26801709)
chr7 (1-32)||(27424928-27424959)
chr7 (1-32)||(27510206-27510237)
chr7 (1-32)||(28547730-28547761)
chr7 (1-32)||(29617495-29617526)
chr7 (1-32)||(31026309-31026340)
chr7 (1-32)||(32619440-32619471)
chr7 (1-32)||(35645689-35645720)
chr7 (1-32)||(35950218-35950249)
chr7 (1-32)||(43119381-43119412)
chr7 (1-32)||(47255039-47255070)
chr7 (1-32)||(48119560-48119591)
chr7 (1-32)||(48719889-48719920)
chr7 (1-30)||(12935829-12935858)
chr7 (3-32)||(42443781-42443810)
chr7 (4-32)||(12364841-12364869)
[»] chr6 (23 HSPs)
chr6 (1-32)||(2816980-2817011)
chr6 (1-32)||(3794122-3794153)
chr6 (1-32)||(3795723-3795754)
chr6 (1-32)||(5052023-5052054)
chr6 (1-32)||(7207934-7207965)
chr6 (1-32)||(7328596-7328627)
chr6 (1-32)||(7425456-7425487)
chr6 (1-32)||(7581134-7581165)
chr6 (1-32)||(8857173-8857204)
chr6 (1-32)||(9704506-9704537)
chr6 (1-32)||(10517289-10517320)
chr6 (1-32)||(13116573-13116604)
chr6 (1-32)||(17441788-17441819)
chr6 (1-32)||(19953777-19953808)
chr6 (1-32)||(27218974-27219005)
chr6 (1-32)||(28148682-28148713)
chr6 (1-32)||(28842744-28842775)
chr6 (1-32)||(32611503-32611534)
chr6 (1-32)||(33573907-33573938)
chr6 (1-32)||(33646925-33646956)
chr6 (1-31)||(20729041-20729071)
chr6 (1-30)||(2488839-2488868)
chr6 (3-32)||(4661188-4661217)
[»] chr4 (37 HSPs)
chr4 (1-32)||(2222629-2222660)
chr4 (1-32)||(3036004-3036035)
chr4 (1-32)||(4700887-4700918)
chr4 (1-32)||(5304959-5304990)
chr4 (1-32)||(6371204-6371235)
chr4 (1-32)||(10141073-10141104)
chr4 (1-32)||(10402531-10402562)
chr4 (1-32)||(12581977-12582008)
chr4 (1-32)||(13564217-13564248)
chr4 (1-32)||(26919417-26919448)
chr4 (1-32)||(33530883-33530914)
chr4 (1-32)||(35948132-35948163)
chr4 (1-32)||(37719090-37719121)
chr4 (1-32)||(37935951-37935982)
chr4 (1-32)||(40051712-40051743)
chr4 (1-32)||(40994052-40994083)
chr4 (1-32)||(43147333-43147364)
chr4 (1-32)||(43596985-43597016)
chr4 (1-32)||(43905799-43905830)
chr4 (1-32)||(46774979-46775010)
chr4 (1-32)||(48569125-48569156)
chr4 (1-32)||(48950874-48950905)
chr4 (1-32)||(49757233-49757264)
chr4 (1-32)||(49901572-49901603)
chr4 (1-32)||(52731388-52731419)
chr4 (1-32)||(53634200-53634231)
chr4 (1-32)||(54015821-54015852)
chr4 (1-32)||(55536469-55536500)
chr4 (1-31)||(10406979-10407009)
chr4 (2-32)||(55853057-55853087)
chr4 (1-30)||(27091425-27091454)
chr4 (1-30)||(31852438-31852467)
chr4 (1-30)||(42334015-42334044)
chr4 (4-32)||(2688188-2688216)
chr4 (4-32)||(21660389-21660417)
chr4 (4-32)||(21669153-21669181)
chr4 (4-32)||(47230874-47230902)
[»] chr3 (39 HSPs)
chr3 (1-32)||(2523016-2523047)
chr3 (1-32)||(3748551-3748582)
chr3 (1-32)||(4139090-4139121)
chr3 (1-32)||(6488214-6488245)
chr3 (1-32)||(6919912-6919943)
chr3 (1-32)||(7270045-7270076)
chr3 (1-32)||(8964725-8964756)
chr3 (1-32)||(10482802-10482833)
chr3 (1-32)||(11206080-11206111)
chr3 (1-32)||(17218578-17218609)
chr3 (1-32)||(18194428-18194459)
chr3 (1-32)||(21324694-21324725)
chr3 (1-32)||(22501880-22501911)
chr3 (1-32)||(30555176-30555207)
chr3 (1-32)||(31327450-31327481)
chr3 (1-32)||(33606889-33606920)
chr3 (1-32)||(33706676-33706707)
chr3 (1-32)||(34757606-34757637)
chr3 (1-32)||(37488409-37488440)
chr3 (1-32)||(37800560-37800591)
chr3 (1-32)||(39720025-39720056)
chr3 (1-32)||(40548393-40548424)
chr3 (1-32)||(40933780-40933811)
chr3 (1-32)||(41936356-41936387)
chr3 (1-32)||(44764519-44764550)
chr3 (1-32)||(45701434-45701465)
chr3 (1-32)||(48251662-48251693)
chr3 (1-32)||(50496763-50496794)
chr3 (1-32)||(50675691-50675722)
chr3 (1-32)||(53163684-53163715)
chr3 (1-32)||(53432686-53432717)
chr3 (1-32)||(53906469-53906500)
chr3 (1-31)||(7920410-7920440)
chr3 (2-32)||(44626126-44626156)
chr3 (1-30)||(5173962-5173991)
chr3 (4-32)||(25938879-25938907)
chr3 (1-29)||(45551761-45551789)
chr3 (1-29)||(50234214-50234242)
chr3 (1-29)||(53578045-53578073)
[»] chr2 (20 HSPs)
chr2 (1-32)||(1260274-1260305)
chr2 (1-32)||(1309075-1309106)
chr2 (1-32)||(1844907-1844938)
chr2 (1-32)||(6331651-6331682)
chr2 (1-32)||(17499039-17499070)
chr2 (1-32)||(18694875-18694906)
chr2 (1-32)||(19253996-19254027)
chr2 (1-32)||(20296508-20296539)
chr2 (1-32)||(29772227-29772258)
chr2 (1-32)||(33228882-33228913)
chr2 (1-32)||(38387745-38387776)
chr2 (1-32)||(38400404-38400435)
chr2 (1-32)||(40535398-40535429)
chr2 (1-32)||(41509606-41509637)
chr2 (1-32)||(41566852-41566883)
chr2 (1-32)||(44822514-44822545)
chr2 (1-31)||(4562702-4562732)
chr2 (4-32)||(4878301-4878329)
chr2 (4-32)||(18862345-18862373)
chr2 (3-31)||(25857245-25857273)
[»] chr1 (35 HSPs)
chr1 (1-32)||(1570141-1570172)
chr1 (1-32)||(2277844-2277875)
chr1 (1-32)||(4482547-4482578)
chr1 (1-32)||(6438013-6438044)
chr1 (1-32)||(7166176-7166207)
chr1 (1-32)||(8984455-8984486)
chr1 (1-32)||(11215091-11215122)
chr1 (1-32)||(12048073-12048104)
chr1 (1-32)||(12502203-12502234)
chr1 (1-32)||(12650333-12650364)
chr1 (1-32)||(13773258-13773289)
chr1 (1-32)||(15819550-15819581)
chr1 (1-32)||(18467147-18467178)
chr1 (1-32)||(18534091-18534122)
chr1 (1-32)||(19011445-19011476)
chr1 (1-32)||(21265746-21265777)
chr1 (1-32)||(22563476-22563507)
chr1 (1-32)||(26584695-26584726)
chr1 (1-32)||(27818658-27818689)
chr1 (1-32)||(28564294-28564325)
chr1 (1-32)||(32594341-32594372)
chr1 (1-32)||(32995092-32995123)
chr1 (1-32)||(40519492-40519523)
chr1 (1-32)||(40520929-40520960)
chr1 (1-32)||(41709872-41709903)
chr1 (1-32)||(45333661-45333692)
chr1 (1-32)||(45517217-45517248)
chr1 (1-32)||(46965830-46965861)
chr1 (1-32)||(48643713-48643744)
chr1 (1-32)||(50899452-50899483)
chr1 (1-32)||(51050280-51050311)
chr1 (1-31)||(32970751-32970781)
chr1 (1-30)||(7491850-7491879)
chr1 (1-29)||(41620468-41620496)
chr1 (4-32)||(48638625-48638653)
[»] scaffold0288 (1 HSPs)
scaffold0288 (3-32)||(21356-21385)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 1e-93; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 92 - 351
Target Start/End: Complemental strand, 42617616 - 42617372
Alignment:
Q  92 atcaaactaaatgtatcatccacgtgtaactgcaagacaagtccttttaagataactgagattcattaagaagtaaacatcttccaacaaatattttttc 191  Q
    ||||||||||||||||||||||| |||||||||||||| | ||| |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  42617616 atcaaactaaatgtatcatccacttgtaactgcaagactaatccctttaagataattgagattcattaagaagtagacatcttccaacaaataatttttc 42617517  T
Q  192 atatacatcgatcagagattgaatctctaaccaaaaagttaataagttaaaagatttaaatatttatcacttgtgtcacactatattccattacccatat 291  Q
    ||||               |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42617516 atat---------------tgaatctctaaccaaaaagttaataagttaaaagatttaaatatttatcagttgtgtcacactatattccattacccatat 42617432  T
Q  292 tagatagataaaagtgtacacacgaatactttggattatcaacatatgttactccctttg 351  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42617431 tagatagataaaagtgtacacacgaatactttgaattatcaacatatgttactccctttg 42617372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2301551 - 2301520
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2301551 aattgtgtgagctctagccactaggctacttg 2301520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2848303 - 2848334
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2848303 aattgtgtgagctctagccactaggctacttg 2848334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4745856 - 4745825
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  4745856 aattgtgtgagctctagccactaggctacttg 4745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8968839 - 8968870
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  8968839 aattgtgtgagctctagccactaggctacttg 8968870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9835123 - 9835154
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  9835123 aattgtgtgagctctagccactaggctacttg 9835154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10404217 - 10404248
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10404217 aattgtgtgagctctagccactaggctacttg 10404248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 11188662 - 11188631
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  11188662 aattgtgtgagctctagccactaggctacttg 11188631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11795583 - 11795614
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  11795583 aattgtgtgagctctagccactaggctacttg 11795614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12463846 - 12463877
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12463846 aattgtgtgagctctagccactaggctacttg 12463877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17545152 - 17545121
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17545152 aattgtgtgagctctagccactaggctacttg 17545121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21749358 - 21749327
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  21749358 aattgtgtgagctctagccactaggctacttg 21749327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 22569225 - 22569194
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  22569225 aattgtgtgagctctagccactaggctacttg 22569194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 25400347 - 25400316
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  25400347 aattgtgtgagctctagccactaggctacttg 25400316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 25648064 - 25648033
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  25648064 aattgtgtgagctctagccactaggctacttg 25648033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27765347 - 27765378
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  27765347 aattgtgtgagctctagccactaggctacttg 27765378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28308324 - 28308355
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  28308324 aattgtgtgagctctagccactaggctacttg 28308355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29691447 - 29691478
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  29691447 aattgtgtgagctctagccactaggctacttg 29691478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35515602 - 35515633
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  35515602 aattgtgtgagctctagccactaggctacttg 35515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 36735962 - 36735993
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  36735962 aattgtgtgagctctagccactaggctacttg 36735993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 39919081 - 39919050
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  39919081 aattgtgtgagctctagccactaggctacttg 39919050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10804209 - 10804179
Alignment:
Q  1 aattgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||||    
T  10804209 aattgtgtgagctctagccactaggctactt 10804179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 5908299 - 5908270
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  5908299 aattgtgtgagctctagccactaggctact 5908270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 9125754 - 9125782
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  9125754 tgtgtgagctctagccactaggctacttg 9125782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 18597501 - 18597529
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  18597501 tgtgtgagctctagccactaggctacttg 18597529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 594 - 625
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  594 aattgtgtgagctctagccactaggctacttg 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1185 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2373 - 2342
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2373 aattgtgtgagctctagccactaggctacttg 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2941 - 2910
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2941 aattgtgtgagctctagccactaggctacttg 2910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3756 - 3787
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3756 aattgtgtgagctctagccactaggctacttg 3787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9056 - 9087
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  9056 aattgtgtgagctctagccactaggctacttg 9087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12549 - 12580
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12549 aattgtgtgagctctagccactaggctacttg 12580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3994 - 3963
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3994 aattgtgtgagctctagccactaggctacttg 3963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17241 - 17210
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17241 aattgtgtgagctctagccactaggctacttg 17210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 17710 - 17741
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17710 aattgtgtgagctctagccactaggctacttg 17741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10806 - 10775
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10806 aattgtgtgagctctagccactaggctacttg 10775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 112198 - 112229
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  112198 aattgtgtgagctctagccactaggctacttg 112229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12241 - 12210
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12241 aattgtgtgagctctagccactaggctacttg 12210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 266685 - 266654
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  266685 aattgtgtgagctctagccactaggctacttg 266654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 257629 - 257660
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  257629 aattgtgtgagctctagccactaggctacttg 257660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 658291 - 658260
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  658291 aattgtgtgagctctagccactaggctacttg 658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 844027 - 843996
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  844027 aattgtgtgagctctagccactaggctacttg 843996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1937400 - 1937431
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  1937400 aattgtgtgagctctagccactaggctacttg 1937431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2787061 - 2787030
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2787061 aattgtgtgagctctagccactaggctacttg 2787030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3189939 - 3189908
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3189939 aattgtgtgagctctagccactaggctacttg 3189908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7816493 - 7816524
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  7816493 aattgtgtgagctctagccactaggctacttg 7816524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8265358 - 8265389
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  8265358 aattgtgtgagctctagccactaggctacttg 8265389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9187203 - 9187172
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  9187203 aattgtgtgagctctagccactaggctacttg 9187172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10568175 - 10568206
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10568175 aattgtgtgagctctagccactaggctacttg 10568206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10736854 - 10736823
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10736854 aattgtgtgagctctagccactaggctacttg 10736823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10761909 - 10761940
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10761909 aattgtgtgagctctagccactaggctacttg 10761940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11127992 - 11128023
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  11127992 aattgtgtgagctctagccactaggctacttg 11128023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 16432108 - 16432077
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  16432108 aattgtgtgagctctagccactaggctacttg 16432077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 16449215 - 16449246
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  16449215 aattgtgtgagctctagccactaggctacttg 16449246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17027861 - 17027830
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17027861 aattgtgtgagctctagccactaggctacttg 17027830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17072543 - 17072512
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17072543 aattgtgtgagctctagccactaggctacttg 17072512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17558297 - 17558266
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17558297 aattgtgtgagctctagccactaggctacttg 17558266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 17575728 - 17575759
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17575728 aattgtgtgagctctagccactaggctacttg 17575759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 17698612 - 17698643
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17698612 aattgtgtgagctctagccactaggctacttg 17698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 22274592 - 22274561
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  22274592 aattgtgtgagctctagccactaggctacttg 22274561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23178871 - 23178840
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  23178871 aattgtgtgagctctagccactaggctacttg 23178840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28420404 - 28420373
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  28420404 aattgtgtgagctctagccactaggctacttg 28420373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28909555 - 28909586
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  28909555 aattgtgtgagctctagccactaggctacttg 28909586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29514716 - 29514747
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  29514716 aattgtgtgagctctagccactaggctacttg 29514747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29733985 - 29733954
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  29733985 aattgtgtgagctctagccactaggctacttg 29733954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 31450937 - 31450906
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  31450937 aattgtgtgagctctagccactaggctacttg 31450906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33838414 - 33838445
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  33838414 aattgtgtgagctctagccactaggctacttg 33838445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34266102 - 34266133
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  34266102 aattgtgtgagctctagccactaggctacttg 34266133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34894459 - 34894490
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  34894459 aattgtgtgagctctagccactaggctacttg 34894490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37717453 - 37717484
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  37717453 aattgtgtgagctctagccactaggctacttg 37717484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 38219548 - 38219517
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  38219548 aattgtgtgagctctagccactaggctacttg 38219517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39169575 - 39169606
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  39169575 aattgtgtgagctctagccactaggctacttg 39169606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39587637 - 39587668
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  39587637 aattgtgtgagctctagccactaggctacttg 39587668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43186943 - 43186974
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  43186943 aattgtgtgagctctagccactaggctacttg 43186974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 37291012 - 37291042
Alignment:
Q  1 aattgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||||    
T  37291012 aattgtgtgagctctagccactaggctactt 37291042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 43847024 - 43847053
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  43847024 aattgtgtgagctctagccactaggctact 43847053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 2908069 - 2908041
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  2908069 tgtgtgagctctagccactaggctacttg 2908041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 5328544 - 5328516
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  5328544 tgtgtgagctctagccactaggctacttg 5328516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 21548474 - 21548446
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  21548474 tgtgtgagctctagccactaggctacttg 21548446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 31712641 - 31712669
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  31712641 tgtgtgagctctagccactaggctacttg 31712669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3062864 - 3062895
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3062864 aattgtgtgagctctagccactaggctacttg 3062895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4960874 - 4960905
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  4960874 aattgtgtgagctctagccactaggctacttg 4960905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9697871 - 9697840
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  9697871 aattgtgtgagctctagccactaggctacttg 9697840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10244869 - 10244838
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10244869 aattgtgtgagctctagccactaggctacttg 10244838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12640569 - 12640538
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12640569 aattgtgtgagctctagccactaggctacttg 12640538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12772205 - 12772236
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12772205 aattgtgtgagctctagccactaggctacttg 12772236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 13720860 - 13720891
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  13720860 aattgtgtgagctctagccactaggctacttg 13720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15238979 - 15239010
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  15238979 aattgtgtgagctctagccactaggctacttg 15239010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19331480 - 19331449
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  19331480 aattgtgtgagctctagccactaggctacttg 19331449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21762872 - 21762841
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  21762872 aattgtgtgagctctagccactaggctacttg 21762841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 24508916 - 24508947
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  24508916 aattgtgtgagctctagccactaggctacttg 24508947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 24781120 - 24781151
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  24781120 aattgtgtgagctctagccactaggctacttg 24781151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26801709 - 26801678
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  26801709 aattgtgtgagctctagccactaggctacttg 26801678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27424928 - 27424959
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  27424928 aattgtgtgagctctagccactaggctacttg 27424959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 27510237 - 27510206
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  27510237 aattgtgtgagctctagccactaggctacttg 27510206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28547761 - 28547730
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  28547761 aattgtgtgagctctagccactaggctacttg 28547730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29617495 - 29617526
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  29617495 aattgtgtgagctctagccactaggctacttg 29617526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 31026309 - 31026340
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  31026309 aattgtgtgagctctagccactaggctacttg 31026340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32619440 - 32619471
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  32619440 aattgtgtgagctctagccactaggctacttg 32619471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35645689 - 35645720
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  35645689 aattgtgtgagctctagccactaggctacttg 35645720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35950218 - 35950249
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  35950218 aattgtgtgagctctagccactaggctacttg 35950249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 43119412 - 43119381
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  43119412 aattgtgtgagctctagccactaggctacttg 43119381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 47255070 - 47255039
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  47255070 aattgtgtgagctctagccactaggctacttg 47255039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48119560 - 48119591
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  48119560 aattgtgtgagctctagccactaggctacttg 48119591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48719889 - 48719920
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  48719889 aattgtgtgagctctagccactaggctacttg 48719920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12935829 - 12935858
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  12935829 aattgtgtgagctctagccactaggctact 12935858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 42443781 - 42443810
Alignment:
Q  3 ttgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||    
T  42443781 ttgtgtgagctctagccactaggctacttg 42443810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 12364841 - 12364869
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  12364841 tgtgtgagctctagccactaggctacttg 12364869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2816980 - 2817011
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2816980 aattgtgtgagctctagccactaggctacttg 2817011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3794153 - 3794122
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3794153 aattgtgtgagctctagccactaggctacttg 3794122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3795754 - 3795723
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3795754 aattgtgtgagctctagccactaggctacttg 3795723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5052054 - 5052023
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  5052054 aattgtgtgagctctagccactaggctacttg 5052023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7207934 - 7207965
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  7207934 aattgtgtgagctctagccactaggctacttg 7207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7328627 - 7328596
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  7328627 aattgtgtgagctctagccactaggctacttg 7328596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7425456 - 7425487
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  7425456 aattgtgtgagctctagccactaggctacttg 7425487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7581134 - 7581165
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  7581134 aattgtgtgagctctagccactaggctacttg 7581165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8857173 - 8857204
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  8857173 aattgtgtgagctctagccactaggctacttg 8857204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9704506 - 9704537
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  9704506 aattgtgtgagctctagccactaggctacttg 9704537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10517289 - 10517320
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10517289 aattgtgtgagctctagccactaggctacttg 10517320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 13116604 - 13116573
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  13116604 aattgtgtgagctctagccactaggctacttg 13116573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17441819 - 17441788
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17441819 aattgtgtgagctctagccactaggctacttg 17441788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19953808 - 19953777
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  19953808 aattgtgtgagctctagccactaggctacttg 19953777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27218974 - 27219005
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  27218974 aattgtgtgagctctagccactaggctacttg 27219005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28148713 - 28148682
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  28148713 aattgtgtgagctctagccactaggctacttg 28148682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28842744 - 28842775
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  28842744 aattgtgtgagctctagccactaggctacttg 28842775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32611534 - 32611503
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  32611534 aattgtgtgagctctagccactaggctacttg 32611503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33573907 - 33573938
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  33573907 aattgtgtgagctctagccactaggctacttg 33573938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33646925 - 33646956
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  33646925 aattgtgtgagctctagccactaggctacttg 33646956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 20729041 - 20729071
Alignment:
Q  1 aattgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||||    
T  20729041 aattgtgtgagctctagccactaggctactt 20729071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 2488868 - 2488839
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  2488868 aattgtgtgagctctagccactaggctact 2488839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 4661188 - 4661217
Alignment:
Q  3 ttgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||    
T  4661188 ttgtgtgagctctagccactaggctacttg 4661217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000008; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2222629 - 2222660
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2222629 aattgtgtgagctctagccactaggctacttg 2222660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3036035 - 3036004
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3036035 aattgtgtgagctctagccactaggctacttg 3036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4700918 - 4700887
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  4700918 aattgtgtgagctctagccactaggctacttg 4700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5304990 - 5304959
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  5304990 aattgtgtgagctctagccactaggctacttg 5304959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6371204 - 6371235
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  6371204 aattgtgtgagctctagccactaggctacttg 6371235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10141073 - 10141104
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10141073 aattgtgtgagctctagccactaggctacttg 10141104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10402531 - 10402562
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10402531 aattgtgtgagctctagccactaggctacttg 10402562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12582008 - 12581977
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12582008 aattgtgtgagctctagccactaggctacttg 12581977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 13564248 - 13564217
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  13564248 aattgtgtgagctctagccactaggctacttg 13564217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26919448 - 26919417
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  26919448 aattgtgtgagctctagccactaggctacttg 26919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33530883 - 33530914
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  33530883 aattgtgtgagctctagccactaggctacttg 33530914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35948163 - 35948132
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  35948163 aattgtgtgagctctagccactaggctacttg 35948132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37719090 - 37719121
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  37719090 aattgtgtgagctctagccactaggctacttg 37719121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37935951 - 37935982
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  37935951 aattgtgtgagctctagccactaggctacttg 37935982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 40051712 - 40051743
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  40051712 aattgtgtgagctctagccactaggctacttg 40051743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40994083 - 40994052
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  40994083 aattgtgtgagctctagccactaggctacttg 40994052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 43147364 - 43147333
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  43147364 aattgtgtgagctctagccactaggctacttg 43147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43596985 - 43597016
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  43596985 aattgtgtgagctctagccactaggctacttg 43597016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43905799 - 43905830
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  43905799 aattgtgtgagctctagccactaggctacttg 43905830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 46775010 - 46774979
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  46775010 aattgtgtgagctctagccactaggctacttg 46774979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 48569156 - 48569125
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  48569156 aattgtgtgagctctagccactaggctacttg 48569125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48950874 - 48950905
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  48950874 aattgtgtgagctctagccactaggctacttg 48950905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 49757264 - 49757233
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  49757264 aattgtgtgagctctagccactaggctacttg 49757233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 49901572 - 49901603
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  49901572 aattgtgtgagctctagccactaggctacttg 49901603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 52731419 - 52731388
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  52731419 aattgtgtgagctctagccactaggctacttg 52731388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 53634231 - 53634200
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  53634231 aattgtgtgagctctagccactaggctacttg 53634200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 54015821 - 54015852
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  54015821 aattgtgtgagctctagccactaggctacttg 54015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 55536469 - 55536500
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  55536469 aattgtgtgagctctagccactaggctacttg 55536500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10407009 - 10406979
Alignment:
Q  1 aattgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||||    
T  10407009 aattgtgtgagctctagccactaggctactt 10406979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 55853087 - 55853057
Alignment:
Q  2 attgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||||    
T  55853087 attgtgtgagctctagccactaggctacttg 55853057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 27091454 - 27091425
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  27091454 aattgtgtgagctctagccactaggctact 27091425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 31852438 - 31852467
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  31852438 aattgtgtgagctctagccactaggctact 31852467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 42334044 - 42334015
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  42334044 aattgtgtgagctctagccactaggctact 42334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 2688188 - 2688216
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  2688188 tgtgtgagctctagccactaggctacttg 2688216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 21660417 - 21660389
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  21660417 tgtgtgagctctagccactaggctacttg 21660389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 21669181 - 21669153
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  21669181 tgtgtgagctctagccactaggctacttg 21669153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 47230902 - 47230874
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  47230902 tgtgtgagctctagccactaggctacttg 47230874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2523016 - 2523047
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2523016 aattgtgtgagctctagccactaggctacttg 2523047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3748582 - 3748551
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3748582 aattgtgtgagctctagccactaggctacttg 3748551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4139090 - 4139121
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  4139090 aattgtgtgagctctagccactaggctacttg 4139121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6488214 - 6488245
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  6488214 aattgtgtgagctctagccactaggctacttg 6488245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6919943 - 6919912
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  6919943 aattgtgtgagctctagccactaggctacttg 6919912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7270045 - 7270076
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  7270045 aattgtgtgagctctagccactaggctacttg 7270076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 8964756 - 8964725
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  8964756 aattgtgtgagctctagccactaggctacttg 8964725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10482833 - 10482802
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  10482833 aattgtgtgagctctagccactaggctacttg 10482802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11206080 - 11206111
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  11206080 aattgtgtgagctctagccactaggctacttg 11206111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 17218578 - 17218609
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17218578 aattgtgtgagctctagccactaggctacttg 17218609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18194428 - 18194459
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  18194428 aattgtgtgagctctagccactaggctacttg 18194459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21324725 - 21324694
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  21324725 aattgtgtgagctctagccactaggctacttg 21324694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 22501911 - 22501880
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  22501911 aattgtgtgagctctagccactaggctacttg 22501880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 30555207 - 30555176
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  30555207 aattgtgtgagctctagccactaggctacttg 30555176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 31327481 - 31327450
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  31327481 aattgtgtgagctctagccactaggctacttg 31327450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33606920 - 33606889
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  33606920 aattgtgtgagctctagccactaggctacttg 33606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33706707 - 33706676
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  33706707 aattgtgtgagctctagccactaggctacttg 33706676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34757606 - 34757637
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  34757606 aattgtgtgagctctagccactaggctacttg 34757637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37488440 - 37488409
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  37488440 aattgtgtgagctctagccactaggctacttg 37488409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37800591 - 37800560
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  37800591 aattgtgtgagctctagccactaggctacttg 37800560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39720025 - 39720056
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  39720025 aattgtgtgagctctagccactaggctacttg 39720056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 40548393 - 40548424
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  40548393 aattgtgtgagctctagccactaggctacttg 40548424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40933811 - 40933780
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  40933811 aattgtgtgagctctagccactaggctacttg 40933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 41936387 - 41936356
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  41936387 aattgtgtgagctctagccactaggctacttg 41936356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 44764550 - 44764519
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  44764550 aattgtgtgagctctagccactaggctacttg 44764519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 45701434 - 45701465
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  45701434 aattgtgtgagctctagccactaggctacttg 45701465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48251662 - 48251693
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  48251662 aattgtgtgagctctagccactaggctacttg 48251693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50496794 - 50496763
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  50496794 aattgtgtgagctctagccactaggctacttg 50496763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50675722 - 50675691
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  50675722 aattgtgtgagctctagccactaggctacttg 50675691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 53163684 - 53163715
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  53163684 aattgtgtgagctctagccactaggctacttg 53163715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 53432717 - 53432686
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  53432717 aattgtgtgagctctagccactaggctacttg 53432686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 53906469 - 53906500
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  53906469 aattgtgtgagctctagccactaggctacttg 53906500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 7920410 - 7920440
Alignment:
Q  1 aattgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||||    
T  7920410 aattgtgtgagctctagccactaggctactt 7920440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 44626126 - 44626156
Alignment:
Q  2 attgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||||    
T  44626126 attgtgtgagctctagccactaggctacttg 44626156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 5173991 - 5173962
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  5173991 aattgtgtgagctctagccactaggctact 5173962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 25938907 - 25938879
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  25938907 tgtgtgagctctagccactaggctacttg 25938879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 45551789 - 45551761
Alignment:
Q  1 aattgtgtgagctctagccactaggctac 29  Q
    |||||||||||||||||||||||||||||    
T  45551789 aattgtgtgagctctagccactaggctac 45551761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 50234214 - 50234242
Alignment:
Q  1 aattgtgtgagctctagccactaggctac 29  Q
    |||||||||||||||||||||||||||||    
T  50234214 aattgtgtgagctctagccactaggctac 50234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 53578045 - 53578073
Alignment:
Q  1 aattgtgtgagctctagccactaggctac 29  Q
    |||||||||||||||||||||||||||||    
T  53578045 aattgtgtgagctctagccactaggctac 53578073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000008; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1260274 - 1260305
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  1260274 aattgtgtgagctctagccactaggctacttg 1260305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 1309106 - 1309075
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  1309106 aattgtgtgagctctagccactaggctacttg 1309075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1844907 - 1844938
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  1844907 aattgtgtgagctctagccactaggctacttg 1844938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6331651 - 6331682
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  6331651 aattgtgtgagctctagccactaggctacttg 6331682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 17499039 - 17499070
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  17499039 aattgtgtgagctctagccactaggctacttg 17499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18694875 - 18694906
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  18694875 aattgtgtgagctctagccactaggctacttg 18694906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 19253996 - 19254027
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  19253996 aattgtgtgagctctagccactaggctacttg 19254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 20296508 - 20296539
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  20296508 aattgtgtgagctctagccactaggctacttg 20296539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29772258 - 29772227
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  29772258 aattgtgtgagctctagccactaggctacttg 29772227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33228913 - 33228882
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  33228913 aattgtgtgagctctagccactaggctacttg 33228882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 38387745 - 38387776
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  38387745 aattgtgtgagctctagccactaggctacttg 38387776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 38400404 - 38400435
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  38400404 aattgtgtgagctctagccactaggctacttg 38400435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40535429 - 40535398
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  40535429 aattgtgtgagctctagccactaggctacttg 40535398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 41509606 - 41509637
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  41509606 aattgtgtgagctctagccactaggctacttg 41509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 41566852 - 41566883
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  41566852 aattgtgtgagctctagccactaggctacttg 41566883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 44822514 - 44822545
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  44822514 aattgtgtgagctctagccactaggctacttg 44822545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 4562732 - 4562702
Alignment:
Q  1 aattgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||||    
T  4562732 aattgtgtgagctctagccactaggctactt 4562702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 4878301 - 4878329
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  4878301 tgtgtgagctctagccactaggctacttg 4878329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 18862345 - 18862373
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  18862345 tgtgtgagctctagccactaggctacttg 18862373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 25857273 - 25857245
Alignment:
Q  3 ttgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||    
T  25857273 ttgtgtgagctctagccactaggctactt 25857245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000008; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 1570172 - 1570141
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  1570172 aattgtgtgagctctagccactaggctacttg 1570141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2277844 - 2277875
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  2277844 aattgtgtgagctctagccactaggctacttg 2277875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4482578 - 4482547
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  4482578 aattgtgtgagctctagccactaggctacttg 4482547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6438044 - 6438013
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  6438044 aattgtgtgagctctagccactaggctacttg 6438013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7166207 - 7166176
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  7166207 aattgtgtgagctctagccactaggctacttg 7166176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 8984486 - 8984455
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  8984486 aattgtgtgagctctagccactaggctacttg 8984455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11215091 - 11215122
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  11215091 aattgtgtgagctctagccactaggctacttg 11215122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12048104 - 12048073
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12048104 aattgtgtgagctctagccactaggctacttg 12048073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12502234 - 12502203
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12502234 aattgtgtgagctctagccactaggctacttg 12502203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12650364 - 12650333
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  12650364 aattgtgtgagctctagccactaggctacttg 12650333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 13773258 - 13773289
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  13773258 aattgtgtgagctctagccactaggctacttg 13773289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 15819581 - 15819550
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  15819581 aattgtgtgagctctagccactaggctacttg 15819550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18467178 - 18467147
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  18467178 aattgtgtgagctctagccactaggctacttg 18467147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18534091 - 18534122
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  18534091 aattgtgtgagctctagccactaggctacttg 18534122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 19011445 - 19011476
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  19011445 aattgtgtgagctctagccactaggctacttg 19011476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 21265746 - 21265777
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  21265746 aattgtgtgagctctagccactaggctacttg 21265777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 22563476 - 22563507
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  22563476 aattgtgtgagctctagccactaggctacttg 22563507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26584726 - 26584695
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  26584726 aattgtgtgagctctagccactaggctacttg 26584695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27818658 - 27818689
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  27818658 aattgtgtgagctctagccactaggctacttg 27818689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28564325 - 28564294
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  28564325 aattgtgtgagctctagccactaggctacttg 28564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32594341 - 32594372
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  32594341 aattgtgtgagctctagccactaggctacttg 32594372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32995092 - 32995123
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  32995092 aattgtgtgagctctagccactaggctacttg 32995123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40519523 - 40519492
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  40519523 aattgtgtgagctctagccactaggctacttg 40519492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 40520929 - 40520960
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  40520929 aattgtgtgagctctagccactaggctacttg 40520960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 41709903 - 41709872
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  41709903 aattgtgtgagctctagccactaggctacttg 41709872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 45333692 - 45333661
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  45333692 aattgtgtgagctctagccactaggctacttg 45333661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 45517248 - 45517217
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  45517248 aattgtgtgagctctagccactaggctacttg 45517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 46965830 - 46965861
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  46965830 aattgtgtgagctctagccactaggctacttg 46965861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48643713 - 48643744
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  48643713 aattgtgtgagctctagccactaggctacttg 48643744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50899483 - 50899452
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  50899483 aattgtgtgagctctagccactaggctacttg 50899452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 51050280 - 51050311
Alignment:
Q  1 aattgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||||    
T  51050280 aattgtgtgagctctagccactaggctacttg 51050311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 32970781 - 32970751
Alignment:
Q  1 aattgtgtgagctctagccactaggctactt 31  Q
    |||||||||||||||||||||||||||||||    
T  32970781 aattgtgtgagctctagccactaggctactt 32970751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 7491850 - 7491879
Alignment:
Q  1 aattgtgtgagctctagccactaggctact 30  Q
    ||||||||||||||||||||||||||||||    
T  7491850 aattgtgtgagctctagccactaggctact 7491879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 41620468 - 41620496
Alignment:
Q  1 aattgtgtgagctctagccactaggctac 29  Q
    |||||||||||||||||||||||||||||    
T  41620468 aattgtgtgagctctagccactaggctac 41620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 48638625 - 48638653
Alignment:
Q  4 tgtgtgagctctagccactaggctacttg 32  Q
    |||||||||||||||||||||||||||||    
T  48638625 tgtgtgagctctagccactaggctacttg 48638653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 21356 - 21385
Alignment:
Q  3 ttgtgtgagctctagccactaggctacttg 32  Q
    ||||||||||||||||||||||||||||||    
T  21356 ttgtgtgagctctagccactaggctacttg 21385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University