View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14460_low_22 (Length: 257)
Name: NF14460_low_22
Description: NF14460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14460_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 4 - 243
Target Start/End: Complemental strand, 27052853 - 27052614
Alignment:
| Q |
4 |
actacaatcacactttatgattctaannnnnnnatcaagcactttcttatagttattattattgagaaatttcatattaaccagtgtctatgatgccaat |
103 |
Q |
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| T |
27052853 |
actacaattacactttatgattctaatttttatatcaagcactttcttatagttattattattgagaaagttcatattaaccagtgtctatgatgccaat |
27052754 |
T |
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| Q |
104 |
gatggtgcctcttccagattgagccttagaaagaacagcagttactatatcttgctttacatgcaagaaatcccaacttcttgttgtgtgaagagtaaga |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27052753 |
gatggtgcctcttccagattgagccttagaaagaacagcagttactatatcttgctttacatgcaagaaatcccaacttcttgttgtgtgaagagtaaga |
27052654 |
T |
|
| Q |
204 |
attttattcggaatcacacggacaacaccgggaaaatctg |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
27052653 |
attttattcggaatcacacggacaacaccgggaaaatctg |
27052614 |
T |
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