View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14461_low_6 (Length: 311)
Name: NF14461_low_6
Description: NF14461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14461_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 16 - 307
Target Start/End: Complemental strand, 21483658 - 21483367
Alignment:
| Q |
16 |
caaacacctctcattgtacctccacaacaattttcacaaccaatggttggagttggcgttggatttgttgctgatccttacacaaatggttctgtttcaa |
115 |
Q |
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| T |
21483658 |
caaacacctctcattgtacctccacaacaattttcacaaccaatggttggagttggagttggatttgttgctgatccttacacaaatggttctgtttcaa |
21483559 |
T |
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| Q |
116 |
ataacattaacccttaccaacctgctgttactaatgaatatcacatgttggaatcaaatcattcatggggtgcttctcaattcaatgttgcaccaaacta |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21483558 |
ataacattaacccttaccaacctgctgttactaatgaatatcacatgttggaatcaaatcattcatggggtgcttctcaattcaatgttgcaccaaacta |
21483459 |
T |
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| Q |
216 |
caatcaatcatttgtggaaaataacaacaatgtgctacaacctcatggtatgaattttggaggttatggaaatcaatataattcttatcagt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21483458 |
caatcaatcatttgtggaaaataacaacaatgtgctacaacctcatggtatgaattttggaggttatggaaatcaatataattcttatcagt |
21483367 |
T |
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