View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14463_high_11 (Length: 222)

Name: NF14463_high_11
Description: NF14463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14463_high_11
NF14463_high_11
[»] chr4 (59 HSPs)
chr4 (2-186)||(47960337-47960521)
chr4 (1-124)||(43837731-43837854)
chr4 (1-129)||(34728260-34728389)
chr4 (1-122)||(6137257-6137379)
chr4 (3-122)||(13386981-13387101)
chr4 (1-119)||(38427109-38427228)
chr4 (1-122)||(51702454-51702576)
chr4 (1-109)||(32626102-32626211)
chr4 (1-125)||(42434269-42434394)
chr4 (1-119)||(34041232-34041351)
chr4 (1-114)||(5975661-5975775)
chr4 (1-122)||(20503430-20503552)
chr4 (2-121)||(20835705-20835825)
chr4 (1-120)||(32090003-32090123)
chr4 (1-120)||(51682599-51682719)
chr4 (1-120)||(13387863-13387982)
chr4 (1-103)||(32868001-32868104)
chr4 (1-98)||(6944600-6944698)
chr4 (2-120)||(48860767-48860883)
chr4 (1-96)||(13372395-13372491)
chr4 (1-96)||(13382596-13382692)
chr4 (1-119)||(19329360-19329479)
chr4 (1-119)||(33117514-33117633)
chr4 (1-109)||(11020388-11020497)
chr4 (47-114)||(38963329-38963396)
chr4 (1-119)||(52344494-52344613)
chr4 (1-82)||(27907027-27907109)
chr4 (42-121)||(22254221-22254300)
chr4 (1-70)||(53773726-53773796)
chr4 (1-109)||(40479857-40479966)
chr4 (1-119)||(38962407-38962524)
chr4 (1-55)||(40875276-40875331)
chr4 (73-122)||(54158114-54158163)
chr4 (1-73)||(4712696-4712768)
chr4 (27-114)||(52719065-52719152)
chr4 (1-98)||(16467197-16467295)
chr4 (1-73)||(6137599-6137671)
chr4 (1-70)||(578700-578769)
chr4 (1-54)||(849278-849331)
chr4 (4-73)||(23384023-23384092)
chr4 (1-38)||(26889493-26889530)
chr4 (1-73)||(6946684-6946756)
chr4 (1-73)||(9744232-9744304)
chr4 (1-73)||(16553464-16553536)
chr4 (1-73)||(26335780-26335852)
chr4 (1-73)||(38425752-38425824)
chr4 (1-73)||(40496243-40496315)
chr4 (1-73)||(45875798-45875870)
chr4 (2-73)||(15725219-15725290)
chr4 (2-73)||(20458933-20459004)
chr4 (20-101)||(28755403-28755487)
chr4 (1-71)||(49425862-49425932)
chr4 (1-51)||(50677981-50678031)
chr4 (1-70)||(26958595-26958664)
chr4 (1-73)||(33811084-33811156)
chr4 (1-70)||(54742487-54742556)
chr4 (1-73)||(11777596-11777668)
chr4 (1-69)||(46106713-46106781)
chr4 (1-73)||(52437526-52437598)
[»] chr3 (70 HSPs)
chr3 (2-123)||(6125767-6125888)
chr3 (1-120)||(37702610-37702730)
chr3 (1-124)||(54160384-54160508)
chr3 (1-121)||(3283312-3283433)
chr3 (1-100)||(36227811-36227910)
chr3 (1-114)||(39328418-39328532)
chr3 (1-124)||(36418709-36418833)
chr3 (2-112)||(8351060-8351171)
chr3 (1-119)||(8674537-8674656)
chr3 (1-119)||(45408247-45408366)
chr3 (1-122)||(21395901-21396023)
chr3 (1-121)||(19855463-19855584)
chr3 (1-121)||(54253835-54253956)
chr3 (1-120)||(54411832-54411952)
chr3 (11-114)||(34673519-34673622)
chr3 (1-123)||(50090870-50090993)
chr3 (1-123)||(13700290-13700413)
chr3 (1-119)||(52945571-52945689)
chr3 (16-122)||(35711884-35711990)
chr3 (2-124)||(42092803-42092927)
chr3 (1-109)||(20513071-20513180)
chr3 (1-101)||(34673384-34673485)
chr3 (27-121)||(5232684-5232778)
chr3 (11-101)||(34673457-34673547)
chr3 (1-102)||(38101229-38101331)
chr3 (16-115)||(27432049-27432149)
chr3 (1-96)||(52089066-52089162)
chr3 (1-91)||(41355442-41355533)
chr3 (1-96)||(11238690-11238786)
chr3 (1-88)||(53518909-53518997)
chr3 (1-123)||(9665306-9665429)
chr3 (20-87)||(19228596-19228663)
chr3 (1-91)||(35280437-35280528)
chr3 (1-97)||(4125996-4126093)
chr3 (1-62)||(21481947-21482009)
chr3 (21-122)||(39867131-39867232)
chr3 (1-64)||(27026677-27026741)
chr3 (1-45)||(27418803-27418847)
chr3 (1-63)||(27038023-27038086)
chr3 (73-119)||(27027333-27027379)
chr3 (146-186)||(38507978-38508018)
chr3 (1-73)||(50801601-50801673)
chr3 (1-73)||(50874207-50874279)
chr3 (1-73)||(53581586-53581658)
chr3 (1-68)||(53467449-53467516)
chr3 (20-101)||(46354034-46354116)
chr3 (73-119)||(46770495-46770541)
chr3 (1-70)||(26152455-26152524)
chr3 (1-38)||(46770514-46770551)
chr3 (1-73)||(27317666-27317738)
chr3 (1-73)||(31039650-31039722)
chr3 (1-120)||(35180573-35180693)
chr3 (30-61)||(45408392-45408423)
chr3 (1-63)||(3269185-3269247)
chr3 (1-74)||(4043660-4043734)
chr3 (1-63)||(6109116-6109178)
chr3 (1-63)||(6114962-6115024)
chr3 (1-71)||(8814805-8814875)
chr3 (1-63)||(17226154-17226216)
chr3 (54-108)||(21481723-21481777)
chr3 (2-52)||(26103729-26103779)
chr3 (1-70)||(7521539-7521608)
chr3 (1-70)||(21727826-21727895)
chr3 (1-70)||(32203180-32203249)
chr3 (78-119)||(46969954-46969995)
chr3 (1-73)||(1376091-1376163)
chr3 (29-57)||(4043938-4043966)
chr3 (1-73)||(12127568-12127640)
chr3 (1-69)||(13349162-13349230)
chr3 (146-186)||(46832153-46832193)
[»] chr7 (60 HSPs)
chr7 (1-121)||(27130995-27131115)
chr7 (1-132)||(42373495-42373626)
chr7 (2-114)||(38368165-38368277)
chr7 (2-121)||(5995090-5995210)
chr7 (1-119)||(24251831-24251947)
chr7 (1-114)||(21993475-21993589)
chr7 (1-120)||(35983106-35983226)
chr7 (1-120)||(36004518-36004638)
chr7 (1-85)||(48709072-48709156)
chr7 (1-122)||(48227267-48227389)
chr7 (18-123)||(3203345-3203450)
chr7 (1-128)||(46003768-46003897)
chr7 (1-120)||(41378407-41378527)
chr7 (2-121)||(43077530-43077650)
chr7 (1-113)||(20568264-20568377)
chr7 (2-119)||(27946861-27946978)
chr7 (1-121)||(45099969-45100090)
chr7 (1-112)||(41037132-41037244)
chr7 (1-112)||(12362869-12362980)
chr7 (1-123)||(31953155-31953278)
chr7 (2-114)||(3961182-3961295)
chr7 (1-119)||(35221701-35221825)
chr7 (1-87)||(41585915-41586002)
chr7 (1-120)||(9522502-9522619)
chr7 (1-98)||(24611437-24611535)
chr7 (37-121)||(3875107-3875189)
chr7 (34-112)||(42090242-42090320)
chr7 (1-53)||(26928001-26928054)
chr7 (1-73)||(25818522-25818594)
chr7 (75-122)||(32392287-32392334)
chr7 (73-114)||(20417981-20418022)
chr7 (1-62)||(44868038-44868099)
chr7 (1-73)||(2509407-2509478)
chr7 (1-73)||(18352402-18352474)
chr7 (1-73)||(41037396-41037468)
chr7 (1-73)||(41407380-41407452)
chr7 (1-62)||(3350050-3350112)
chr7 (1-73)||(15957299-15957372)
chr7 (1-73)||(938933-939005)
chr7 (1-73)||(2936678-2936750)
chr7 (1-45)||(3407183-3407227)
chr7 (72-112)||(14313959-14313999)
chr7 (1-73)||(28912120-28912192)
chr7 (1-73)||(38367942-38368014)
chr7 (78-122)||(48624998-48625042)
chr7 (34-101)||(36343021-36343088)
chr7 (147-190)||(45832944-45832987)
chr7 (1-63)||(4655236-4655298)
chr7 (53-119)||(28059314-28059379)
chr7 (1-74)||(45225298-45225372)
chr7 (1-63)||(45225580-45225642)
chr7 (1-73)||(6736596-6736669)
chr7 (1-70)||(11766159-11766228)
chr7 (1-73)||(23740076-23740149)
chr7 (1-73)||(454142-454214)
chr7 (9-49)||(3875209-3875249)
chr7 (1-73)||(9401742-9401814)
chr7 (1-61)||(27168351-27168411)
chr7 (78-114)||(28333815-28333851)
chr7 (146-178)||(44118241-44118273)
[»] chr8 (58 HSPs)
chr8 (1-122)||(12176244-12176365)
chr8 (1-122)||(12420672-12420793)
chr8 (16-121)||(10078303-10078408)
chr8 (1-121)||(26912359-26912480)
chr8 (1-128)||(28539155-28539283)
chr8 (1-120)||(38498287-38498407)
chr8 (1-112)||(39077320-39077432)
chr8 (1-122)||(23472512-23472633)
chr8 (1-114)||(12295203-12295317)
chr8 (1-121)||(9479413-9479534)
chr8 (16-112)||(44873920-44874016)
chr8 (1-123)||(13326968-13327089)
chr8 (2-123)||(33568106-33568228)
chr8 (28-121)||(30774124-30774217)
chr8 (1-112)||(16930841-16930953)
chr8 (1-123)||(14041327-14041450)
chr8 (1-113)||(40067589-40067702)
chr8 (1-112)||(9478719-9478831)
chr8 (1-119)||(5224300-5224418)
chr8 (28-119)||(16784331-16784422)
chr8 (1-119)||(42806210-42806331)
chr8 (1-119)||(1271060-1271182)
chr8 (1-98)||(14916699-14916797)
chr8 (1-114)||(22812359-22812472)
chr8 (1-91)||(253987-254078)
chr8 (1-91)||(661780-661871)
chr8 (1-108)||(28969137-28969244)
chr8 (3-65)||(19922565-19922628)
chr8 (1-110)||(31272811-31272921)
chr8 (34-112)||(44473755-44473833)
chr8 (3-110)||(1983517-1983625)
chr8 (1-91)||(847578-847669)
chr8 (20-99)||(41829576-41829655)
chr8 (48-109)||(10775933-10775994)
chr8 (73-114)||(14371614-14371655)
chr8 (1-73)||(13468337-13468409)
chr8 (78-122)||(39589991-39590035)
chr8 (2-73)||(10616379-10616450)
chr8 (73-119)||(38071134-38071180)
chr8 (3-73)||(39934439-39934509)
chr8 (1-39)||(40301372-40301410)
chr8 (78-119)||(3210920-3210961)
chr8 (4-73)||(32069110-32069179)
chr8 (1-65)||(38092156-38092221)
chr8 (1-73)||(3369800-3369871)
chr8 (1-73)||(13269270-13269342)
chr8 (81-121)||(16645536-16645576)
chr8 (1-73)||(26042977-26043049)
chr8 (1-73)||(27545848-27545920)
chr8 (1-73)||(29125746-29125818)
chr8 (1-73)||(32486963-32487035)
chr8 (1-63)||(3154254-3154316)
chr8 (1-63)||(14819258-14819320)
chr8 (3-73)||(36899827-36899897)
chr8 (3-71)||(1281922-1281990)
chr8 (1-73)||(26867959-26868031)
chr8 (1-73)||(35550628-35550700)
chr8 (2-70)||(45299625-45299693)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-123)||(35050-35173)
[»] chr5 (49 HSPs)
chr5 (11-121)||(16273615-16273725)
chr5 (1-123)||(13960417-13960539)
chr5 (1-121)||(28038243-28038364)
chr5 (1-120)||(19323739-19323859)
chr5 (1-121)||(31056412-31056532)
chr5 (1-112)||(31042563-31042674)
chr5 (1-119)||(27365716-27365834)
chr5 (1-121)||(23204375-23204496)
chr5 (1-124)||(16994178-16994302)
chr5 (1-123)||(9741722-9741845)
chr5 (1-121)||(37172431-37172552)
chr5 (1-120)||(38758660-38758779)
chr5 (51-122)||(21913836-21913907)
chr5 (1-122)||(17689378-17689499)
chr5 (20-114)||(20269239-20269333)
chr5 (1-121)||(18015642-18015762)
chr5 (1-89)||(19325076-19325166)
chr5 (1-120)||(28813097-28813218)
chr5 (1-108)||(15978814-15978922)
chr5 (3-65)||(26730345-26730408)
chr5 (40-122)||(33429221-33429303)
chr5 (1-58)||(5497783-5497840)
chr5 (1-98)||(38293517-38293616)
chr5 (1-73)||(17421716-17421788)
chr5 (1-73)||(25912130-25912202)
chr5 (1-73)||(31752138-31752210)
chr5 (73-120)||(15388222-15388269)
chr5 (1-79)||(19995319-19995395)
chr5 (1-70)||(31240335-31240404)
chr5 (1-70)||(37249476-37249545)
chr5 (1-73)||(4083760-4083832)
chr5 (1-73)||(7944310-7944382)
chr5 (1-73)||(14369789-14369861)
chr5 (3-73)||(17233004-17233074)
chr5 (1-71)||(39548930-39549000)
chr5 (1-70)||(22701835-22701903)
chr5 (1-62)||(29302056-29302117)
chr5 (1-62)||(30687866-30687927)
chr5 (1-70)||(37468707-37468776)
chr5 (1-73)||(3038909-3038981)
chr5 (1-73)||(6436445-6436517)
chr5 (1-73)||(10951077-10951149)
chr5 (1-73)||(12910110-12910182)
chr5 (68-120)||(19994565-19994617)
chr5 (3-39)||(23129639-23129675)
chr5 (2-73)||(28747785-28747856)
chr5 (11-39)||(33429254-33429282)
chr5 (1-73)||(33696075-33696147)
chr5 (1-61)||(35425251-35425310)
[»] chr2 (43 HSPs)
chr2 (1-121)||(9548244-9548365)
chr2 (1-120)||(29471668-29471788)
chr2 (1-119)||(12725751-12725870)
chr2 (1-119)||(18924573-18924692)
chr2 (1-114)||(10664725-10664839)
chr2 (1-120)||(1749952-1750072)
chr2 (1-119)||(4206430-4206551)
chr2 (2-112)||(39089138-39089249)
chr2 (2-119)||(42090415-42090533)
chr2 (1-113)||(33740241-33740354)
chr2 (8-119)||(39434973-39435084)
chr2 (3-121)||(24314213-24314332)
chr2 (1-109)||(21950650-21950759)
chr2 (2-133)||(44539878-44540011)
chr2 (2-121)||(16719762-16719882)
chr2 (1-122)||(34125583-34125701)
chr2 (3-112)||(2969684-2969794)
chr2 (1-120)||(25880575-25880698)
chr2 (1-119)||(39961573-39961691)
chr2 (1-65)||(12895383-12895448)
chr2 (1-73)||(768581-768653)
chr2 (40-120)||(25810479-25810559)
chr2 (144-186)||(22142346-22142388)
chr2 (78-121)||(10862575-10862618)
chr2 (1-39)||(27175507-27175545)
chr2 (73-119)||(33471431-33471477)
chr2 (1-73)||(11675237-11675310)
chr2 (73-114)||(27175517-27175558)
chr2 (1-70)||(37169644-37169713)
chr2 (7-54)||(2969625-2969673)
chr2 (146-186)||(7826047-7826087)
chr2 (1-73)||(13002059-13002131)
chr2 (1-73)||(34082652-34082724)
chr2 (147-190)||(28293459-28293502)
chr2 (78-113)||(36779856-36779891)
chr2 (1-39)||(5601710-5601748)
chr2 (3-73)||(33739632-33739702)
chr2 (78-119)||(6231221-6231262)
chr2 (1-70)||(23175347-23175416)
chr2 (1-70)||(23586604-23586673)
chr2 (1-73)||(23664834-23664906)
chr2 (78-114)||(34450321-34450357)
chr2 (146-186)||(43780666-43780706)
[»] chr1 (56 HSPs)
chr1 (2-128)||(30414140-30414267)
chr1 (21-128)||(30819571-30819678)
chr1 (1-112)||(1838697-1838810)
chr1 (2-114)||(17168161-17168273)
chr1 (1-119)||(25671014-25671133)
chr1 (1-122)||(7336095-7336217)
chr1 (2-123)||(14463316-14463438)
chr1 (1-120)||(2964899-2965019)
chr1 (1-112)||(25825335-25825447)
chr1 (1-122)||(1406707-1406829)
chr1 (1-114)||(47921566-47921680)
chr1 (1-113)||(10769806-10769918)
chr1 (1-119)||(1627712-1627830)
chr1 (16-110)||(17452949-17453043)
chr1 (1-106)||(24992902-24993008)
chr1 (1-121)||(44720064-44720184)
chr1 (1-101)||(43939489-43939590)
chr1 (4-91)||(15661119-15661207)
chr1 (1-112)||(40460989-40461101)
chr1 (4-86)||(10835582-10835664)
chr1 (20-109)||(42470767-42470856)
chr1 (1-114)||(9005434-9005546)
chr1 (1-119)||(26213736-26213855)
chr1 (38-114)||(41146548-41146624)
chr1 (27-114)||(5226805-5226892)
chr1 (1-79)||(8549599-8549678)
chr1 (50-121)||(9679715-9679786)
chr1 (1-62)||(26897311-26897373)
chr1 (55-121)||(38509712-38509778)
chr1 (1-73)||(463399-463471)
chr1 (1-73)||(16005601-16005673)
chr1 (1-73)||(26843084-26843156)
chr1 (1-84)||(13157635-13157718)
chr1 (1-72)||(24770717-24770788)
chr1 (36-91)||(36630385-36630440)
chr1 (1-70)||(13264568-13264637)
chr1 (1-70)||(20411138-20411207)
chr1 (4-73)||(28454745-28454814)
chr1 (81-121)||(1469751-1469791)
chr1 (146-186)||(27840306-27840346)
chr1 (1-73)||(34515217-34515289)
chr1 (1-73)||(36389545-36389617)
chr1 (1-73)||(50559336-50559408)
chr1 (2-73)||(51431884-51431955)
chr1 (1-63)||(27255600-27255662)
chr1 (1-74)||(39424353-39424427)
chr1 (68-122)||(49659889-49659943)
chr1 (1-70)||(27787890-27787959)
chr1 (1-73)||(158501-158573)
chr1 (1-73)||(3979464-3979536)
chr1 (1-73)||(5491688-5491760)
chr1 (1-73)||(6192512-6192584)
chr1 (1-73)||(8643033-8643105)
chr1 (29-109)||(30289030-30289110)
chr1 (1-41)||(41146287-41146327)
chr1 (1-44)||(49660363-49660407)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-122)||(392403-392525)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-114)||(103284-103397)
scaffold0003 (1-38)||(88208-88245)
scaffold0003 (73-121)||(88218-88266)
[»] chr6 (26 HSPs)
chr6 (1-122)||(9891370-9891492)
chr6 (1-110)||(12159485-12159595)
chr6 (1-114)||(17347083-17347197)
chr6 (1-102)||(15081138-15081240)
chr6 (28-120)||(18096330-18096422)
chr6 (1-114)||(10074998-10075112)
chr6 (1-121)||(6322488-6322609)
chr6 (28-120)||(18102450-18102542)
chr6 (1-91)||(19104317-19104408)
chr6 (1-73)||(33730555-33730627)
chr6 (41-119)||(30416461-30416539)
chr6 (27-88)||(7190635-7190696)
chr6 (3-108)||(9533376-9533486)
chr6 (1-70)||(14488332-14488401)
chr6 (146-186)||(34007563-34007603)
chr6 (3-57)||(14975445-14975498)
chr6 (2-73)||(4898214-4898286)
chr6 (1-73)||(4898533-4898605)
chr6 (1-73)||(25061688-25061760)
chr6 (1-56)||(25090558-25090614)
chr6 (1-74)||(4184347-4184421)
chr6 (1-63)||(9955746-9955808)
chr6 (78-120)||(19143629-19143671)
chr6 (2-63)||(29646401-29646462)
chr6 (73-113)||(22423946-22423986)
chr6 (1-61)||(31132829-31132889)
[»] scaffold0093 (1 HSPs)
scaffold0093 (1-114)||(9157-9270)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-114)||(478315-478429)
scaffold0002 (1-63)||(94846-94909)
scaffold0002 (77-114)||(95051-95088)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-119)||(121670-121789)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-120)||(231166-231286)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-109)||(17796-17905)
[»] scaffold0007 (1 HSPs)
scaffold0007 (41-114)||(77030-77103)
[»] scaffold0009 (1 HSPs)
scaffold0009 (6-119)||(49821-49934)
[»] scaffold0091 (1 HSPs)
scaffold0091 (2-65)||(3772-3835)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-73)||(9820-9892)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-70)||(58080-58149)
[»] scaffold0418 (1 HSPs)
scaffold0418 (1-73)||(5720-5792)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-73)||(20707-20779)
[»] scaffold0778 (1 HSPs)
scaffold0778 (1-63)||(6222-6284)
[»] scaffold0112 (1 HSPs)
scaffold0112 (78-119)||(35952-35993)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-73)||(4097-4168)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1-73)||(6576-6648)


Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 47960337 - 47960521
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47960337 tttttagttataacttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacaccttcataaaa 47960436  T
Q  102 ggtgtcttctagctaaacccttaattatatacttatgttaaggaaactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    ||||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47960437 ggtgtcttctaaccaaacccttgattatatacctatgttaaggaaactagatctcctacccgtactgtcgcacgggtcatttata 47960521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 43837731 - 43837854
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  43837731 ctttttagttataacttgctaaaggacaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaacgacaccttcataaa 43837830  T
Q  101 aggtgtcttctagctaaaccctta 124  Q
    |||||||||||||| |||||||||    
T  43837831 aggtgtcttctagcaaaaccctta 43837854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 34728260 - 34728389
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  34728260 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgcttatagaataacttgctaaaagacaccttcataa 34728359  T
Q  100 aaggtgtcttctagctaaacccttaattat 129  Q
    ||||||||||||||| ||||||||| ||||    
T  34728360 aaggtgtcttctagcaaaacccttatttat 34728389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 6137379 - 6137257
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||    
T  6137379 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatagaataacttgctaaaagacacattcataa 6137280  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    ||||||||||||||| |||||||    
T  6137279 aaggtgtcttctagcaaaaccct 6137257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 13387101 - 13386981
Alignment:
Q  3 ttttagttataact-tgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| || ||||||    
T  13387101 ttttagttataactatgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacacctttataaaa 13387002  T
Q  102 ggtgtcttctagctaaaccct 122  Q
     |||||||||||| |||||||    
T  13387001 tgtgtcttctagcaaaaccct 13386981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 38427109 - 38427228
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||   |||| ||||||||||||||||||| |||||||    
T  38427109 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgctaaaagacactttcataa 38427208  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||||||||||||||| ||||    
T  38427209 aaggtgtcttctagcaaaac 38427228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 51702576 - 51702454
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  51702576 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtttcttttagcaaatgctcatagaataacttgctaaaagacactttcataa 51702477  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
     |||||||||||||| |||||||    
T  51702476 gaggtgtcttctagcaaaaccct 51702454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32626102 - 32626211
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  32626102 ctttttagttataactttgctaaaagacaacttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataa 32626201  T
Q  100 aaggtgtctt 109  Q
    ||||||||||    
T  32626202 aaggtgtctt 32626211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 42434269 - 42434394
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||| |||| ||| |||    
T  42434269 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaaaaacaccttcctaa 42434368  T
Q  100 aaggtgtcttctagctaaacccttaa 125  Q
    ||||||||||||| | ||||||||||    
T  42434369 aaggtgtcttctaacaaaacccttaa 42434394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34041232 - 34041351
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||    
T  34041232 ctttttagttataactttgctaaaagacaccttcattaaaattacttggtgtcttttaacaaatgcttatagagtaacttgctaaaagacacattcataa 34041331  T
Q  100 aaggtgtcttctagctaaac 119  Q
    || |||||||||||| ||||    
T  34041332 aatgtgtcttctagcaaaac 34041351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5975775 - 5975661
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | |||||||  |||  ||||||||||||||||||| |||||||    
T  5975775 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtctttcaacaaatgctaatataataacttgctaaaagacaccttcataa 5975676  T
Q  100 aaggtgtcttctagc 114  Q
    || ||||||||||||    
T  5975675 aatgtgtcttctagc 5975661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 20503552 - 20503430
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||   |||| ||| |||||||||| |||| |||||||    
T  20503552 ctttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaaaacaccttcataa 20503453  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    |||||| |||||||| |||||||    
T  20503452 aaggtgccttctagcaaaaccct 20503430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 20835825 - 20835705
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| |||||||| ||||||| ||||| ||||||||| ||||||| |||||||  |||| ||||||||||||||||||| ||||||||    
T  20835825 tttttagttataactttgctaaaagacaccttcgtaaaatttagttggtatcttttaacaaatgctaatagaataacttgctaaaagacaccttcataaa 20835726  T
Q  101 aggtgtcttctagctaaaccc 121  Q
    ||||||||| |||| ||||||    
T  20835725 aggtgtcttatagcaaaaccc 20835705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32090003 - 32090123
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||| ||||||||||||||||||||||||||| |||||||  |||  ||||||||||||||||||| |||||||    
T  32090003 ctttttagttataactttgttaaaagacacattcataaaaattagttggtgtcttttaacaaatgctaataaaataacttgctaaaagacaccttcataa 32090102  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||| ||||||||||| |||||    
T  32090103 aagatgtcttctagcaaaacc 32090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 51682599 - 51682719
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||   |||| |||||||||||||| |||| |||||||    
T  51682599 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaaaacaccttcataa 51682698  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||||||| ||||||| |||||    
T  51682699 aaggtgttttctagcaaaacc 51682719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13387982 - 13387863
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || ||||||||||||||| ||||||||| |||||||||||||| |||||| | ||||||||||||||||||||||||  ||||||    
T  13387982 ctttttagttataattttgctaaaaggcacctttataaaaatttgttggtgtcttttaacaaatgtcaataggataacttgctaaaagacac-ctcataa 13387884  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || ||||| |||||| |||||    
T  13387883 aatgtgtcatctagcaaaacc 13387863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32868104 - 32868001
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| | ||    
T  32868104 ctttttagttataactttgctaaaacacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaaagacacatttacaa 32868005  T
Q  100 aagg 103  Q
    ||||    
T  32868004 aagg 32868001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6944600 - 6944698
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcata 98  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||  |||| ||||||||||||||||||| ||||||    
T  6944600 ctttttagttataactttgctaaaagacaccttcataaaacttagttggtgtcgtttagcaaatgctcatagaataacttgctaaaagacaccttcata 6944698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 48860767 - 48860883
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| || ||||| |||||||||||   ||||||||||||||||| |||||||  |||| ||||||||||||||||||| || |||||    
T  48860767 tttttagttataactttgcgaaaagacaccttcataa---ttagttggtgtcttttaacaaatgctcatagaataacttgctaaaagacacctttataaa 48860863  T
Q  101 aggtgtcttctagctaaacc 120  Q
    |||||||||||||| |||||    
T  48860864 aggtgtcttctagcaaaacc 48860883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13372491 - 13372395
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattca 96  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  || | ||||||||||||||||||| ||||    
T  13372491 cttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatggaataacttgctaaaagacaccttca 13372395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13382692 - 13382596
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattca 96  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  || | ||||||||||||||||||| ||||    
T  13382692 cttttttgttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatggaataacttgctaaaagacaccttca 13382596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 19329479 - 19329360
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||   |||| |||| ||| ||||| |||| |||||||    
T  19329479 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgatcatagaataatttgttaaaatacaccttcataa 19329380  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||| ||| ||||||| ||||    
T  19329379 aagatgttttctagcaaaac 19329360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 33117633 - 33117514
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| |||||| ||||||||||||||||| |||||||||||||   |||| ||| |||||||||| |||| |||||||    
T  33117633 ctttttagttataactttgttaaaagacacctttataaaaattagttggtgacttttagcaaatgatcatagaatatcttgctaaaatacaccttcataa 33117534  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||||| ||||||||| ||||    
T  33117533 aaggtatcttctagcaaaac 33117514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11020388 - 11020497
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||| || ||||| ||||||| ||||||   |||| |||||||||||||| |||| |||||||    
T  11020388 ctttttagttataactttgctaaaagacaccttcataaaaaataattggtatcttttaacaaatgttcatagaataacttgctaaaacacaccttcataa 11020487  T
Q  100 aaggtgtctt 109  Q
    ||||||||||    
T  11020488 aaggtgtctt 11020497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 38963329 - 38963396
Alignment:
Q  47 ggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  38963329 ggtgtcttttagcaaatgctcatagaataacttgctaaaagacacattcataaaaggtgtcttctagc 38963396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 52344613 - 52344494
Alignment:
Q  1 ctttttagttataa-cttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||| |||||| ||||||||||| ||| |||||||| |||||||||||||||||| ||||||| ||||| ||||| |  |||| || ||||||||||    
T  52344613 ctttttaattataaacttgctaaaagacacattcataaatattagttggtgtcttttaacaaatgcttatagaataacatattaaatgatacattcataa 52344514  T
Q  100 aaggtgtcttctagctaaac 119  Q
    || |||||||||||| ||||    
T  52344513 aatgtgtcttctagcaaaac 52344494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27907109 - 27907027
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgct 82  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||    
T  27907109 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgct 27907027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 22254300 - 22254221
Alignment:
Q  42 tagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||||||| |||||||||  ||||||||||| ||||||    
T  22254300 tagttggtgtcttttaacaaatgccaatagaataacttgctaaaagacaccttcataaaaaatgtcttctagcaaaaccc 22254221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 53773726 - 53773796
Alignment:
Q  1 ctttttagttataacttgctaaaagg-caccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||| ||||||||| |||||    
T  53773726 ctttttagttataacttgctaaaaagacaccatcataaaaattagttggtgtcttctagcaaatgtctata 53773796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40479966 - 40479857
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||| ||||||   || |  ||| || |||||| ||| ||||||||    
T  40479966 ctttttagttataactttgctaaaaaacaccttcataaaaattagttgatgtcttttaacaaatgttaattgagtaaattactaaaaaacatattcataa 40479867  T
Q  100 aaggtgtctt 109  Q
    ||||||||||    
T  40479866 aaggtgtctt 40479857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 38962524 - 38962407
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||| ||||||||| |||||||  || ||| |||||||||||||||||||||||| ||||||| ||||   | |||||||||||||||| |||||||    
T  38962524 ctttttatttataactttgctaaaa--catctttataaaaattagttggtgtcttttaacaaatgcttataaagtgacttgctaaaagacaccttcataa 38962427  T
Q  100 aaggtgtcttctagctaaac 119  Q
     || ||| ||||||| ||||    
T  38962426 tagttgtattctagcaaaac 38962407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40875331 - 40875276
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttt 55  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  40875331 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttt 40875276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 54158163 - 54158114
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccct 122  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  54158163 ataacttgctaaaagacaccttcataaaaggtgtcttctagcaaaaccct 54158114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4712696 - 4712768
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| ||||||| |||||||||||||    
T  4712696 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtattttagcgaatgcctatagga 4712768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 52719152 - 52719065
Alignment:
Q  27 caccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    ||||||| ||||||||||||| ||||||||| |||||||  |||| |||| ||| ||||  |||| ||||||||| ||||||||||||    
T  52719152 caccttcgtaaaaattagttgatgtcttttaacaaatgctaatagaataatttgttaaagaacaccttcataaaatgtgtcttctagc 52719065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16467197 - 16467295
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcata 98  Q
    ||||||||||||||||| | ||||||  |||||||||||||||||||||||  ||||| ||||||   |||  |||||||| |||||||||| ||||||    
T  16467197 ctttttagttataactttgttaaaagataccttcataaaaattagttggtgctttttaacaaatgttcatataataacttgttaaaagacaccttcata 16467295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6137671 - 6137599
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||| ||||||  |||||||  |||||| ||| ||||| || ||||||||||||||||||    
T  6137671 ctttttagttataacttactaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctatagga 6137599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 578769 - 578700
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||| ||||||    
T  578769 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctata 578700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 849278 - 849331
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtctt 54  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||  |||||||    
T  849278 ctttttagttataacttgctaaaagacaccttcctaaaaactagtgagtgtctt 849331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 23384092 - 23384023
Alignment:
Q  4 tttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||| ||||| ||||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  23384092 tttagttataacttgttaaaacgcaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 23384023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26889530 - 26889493
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaa 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  26889530 ctttttagttataacttgctaaaagacaccttcataaa 26889493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6946684 - 6946756
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  || ||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  6946684 ctttttagttataacttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 6946756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9744304 - 9744232
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||| ||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  9744304 ctttttatttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 9744232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16553464 - 16553536
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| | ||| || ||||||||||||||||||    
T  16553464 ctttttagttataacttgctaaaacacactttctaaaaaataagtggatgtattctagcaaatgcctatagga 16553536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26335780 - 26335852
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  || |||||||||||||||    
T  26335780 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaaatgcctatagga 26335852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38425824 - 38425752
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| | | ||||| || ||||||||||||||||||    
T  38425824 ctttttagttataacttgctaaaacacacattctaaaaaataaatgggtgtgttctagcaaatgcctatagga 38425752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40496315 - 40496243
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| || ||||||||| ||||||||    
T  40496315 ctttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgtctatagga 40496243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45875798 - 45875870
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||| |||||||||  ||| |||| |||||| ||| ||||| |  ||||||||||||||||||    
T  45875798 ctttttagttataatttgctaaaacacacattcaaaaaaataagtgggtgtatcctagcaaatgcctatagga 45875870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 15725219 - 15725290
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||| ||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  15725219 tttttagttataacttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 15725290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 20459004 - 20458933
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||||||  || ||||  |||||| ||| ||| | || ||||||||||||||||||    
T  20459004 tttttagttataacttgctaaaacacatcttctaaaaaataagtgggtatattctagcaaatgcctatagga 20458933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 28755487 - 28755403
Alignment:
Q  20 taaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctat---aggataacttgctaaaagacacattcataaaa 101  Q
    |||||| || |||||||||||||| ||||||||||||| |||||||  ||   |  |||||||| |||||||||| |||||||||    
T  28755487 taaaagacaacttcataaaaattaattggtgtcttttaacaaatgctcataaaataataacttgttaaaagacaccttcataaaa 28755403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49425932 - 49425862
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatag 71  Q
    |||||||||||||| |||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||    
T  49425932 ctttttagttataagttgctaaaacacaccttctaaaaaataagtaggtgtatcctagcaaatgcctatag 49425862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50677981 - 50678031
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgt 51  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||| |||||    
T  50677981 ctttttagttataacttgctaaaacacaccttaataaaaactagtgggtgt 50678031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26958595 - 26958664
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    |||||||||||||| |||||||||  ||| |||  |||||| ||| ||||| || |||||||||||||||    
T  26958595 ctttttagttataatttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctata 26958664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33811084 - 33811156
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaatt-agttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| ||| |||||||| ||| ||||| || |||||||||||| |||||    
T  33811084 ctttttagttataacttgctaaaacacactttc-taaaaattaagtgggtgtattatagcaaatgcctgtagga 33811156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54742487 - 54742556
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    |||| |||||||||||||||||||  ||| |||  ||| || ||| ||||| ||||||||||||||||||    
T  54742487 ctttctagttataacttgctaaaacacacattctaaaatataagtgggtgtattttagcaaatgcctata 54742556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11777668 - 11777596
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||| ||||||  |||||||  |||||| ||| ||||| |  |||||||||| |||||||    
T  11777668 ctttttagttataacttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcttatagga 11777596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 46106713 - 46106781
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctat 69  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| |  ||||||||||||||    
T  46106713 ctttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctat 46106781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52437598 - 52437526
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  || |||||| ||||||||    
T  52437598 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaaatgtctatagga 52437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 6125888 - 6125767
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  6125888 tttttagttataacttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgtctataagataacttgctaaaagacaccttcataaaa 6125789  T
Q  102 ggtgtcttctagctaaaccctt 123  Q
     |||||||||||| ||||||||    
T  6125788 tgtgtcttctagcaaaaccctt 6125767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37702610 - 37702730
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||    
T  37702610 ctttttagttataactttgctaaaaaacaccttcataaaaattagttggtgtctattagcaaatgccaataggataacttgctaaaagacactttcaaaa 37702709  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||||||||||||||| |||||    
T  37702710 aaggtgtcttctagcaaaacc 37702730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 54160508 - 54160384
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||| |||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||    
T  54160508 cttttttgttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgcttatagaataacttgctaaaagacaccttcataa 54160409  T
Q  100 aaggtgtcttctagctaaaccctta 124  Q
    ||||||||||||||| |||||||||    
T  54160408 aaggtgtcttctagcaaaaccctta 54160384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 3283312 - 3283433
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  3283312 ctttttagttatagctttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataa 3283411  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    || |||||||||||| ||||||    
T  3283412 aatgtgtcttctagcaaaaccc 3283433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36227910 - 36227811
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  36227910 ctttttagttataacttgctaaaagacaccttcataaaaattaattggtgtcttttagcaaacgcctataagataacttgctaaaaaacacattcataaa 36227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39328532 - 39328418
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||| |||||||    
T  39328532 ctttttagttataactttgctaaaagacactttcataaaaattagttggtgtcttttaagaaatgtcaataggataacttgctaaaagacaccttcataa 39328433  T
Q  100 aaggtgtcttctagc 114  Q
    |||||||||||||||    
T  39328432 aaggtgtcttctagc 39328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 36418833 - 36418709
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||| ||||||||| |||||||| |||||| ||||||| || ||||||||||||| |||||| | |||||||||||||||||||||||| |||||||    
T  36418833 ctttttaattataactttgctaaaagacaccttgataaaaaataattggtgtcttttaacaaatgtcaataggataacttgctaaaagacactttcataa 36418734  T
Q  100 aaggtgtcttctagctaaaccctta 124  Q
    ||||||||||||||| |||||||||    
T  36418733 aaggtgtcttctagcaaaaccctta 36418709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 8351171 - 8351060
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  8351171 tttttagttataactttgttaaaagacacattcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataaa 8351072  T
Q  101 aggtgtcttcta 112  Q
    | ||||||||||    
T  8351071 aagtgtcttcta 8351060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 8674656 - 8674537
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||| | |||||||||||||  |||  ||||||||||||||||||| |||||||    
T  8674656 ctttttagttataactttgctaaaagacaccttcataaaaatcagttggtctgttttagcaaatgctcataaaataacttgctaaaagacactttcataa 8674557  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||||||||||||||| ||||    
T  8674556 aaggtgtcttctagcaaaac 8674537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45408366 - 45408247
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || | |||||| |||||||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  45408366 ctttttagttataattttggtaaaagacaccttcataaaaattagtttgtgtcttttagcaaatgctcatagaataacttgctaaaagacactttcataa 45408267  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||||||| ||||||| ||||    
T  45408266 aaggtgttttctagcaaaac 45408247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 21395901 - 21396023
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||| || |||||| ||||||||||||||||| |||||||  |||| |||||||||||||| |||| |||||||    
T  21395901 ctttttagttataactttgctaaaagacacatttataaaatttagttggtgtcttttaacaaatgctcatagaataacttgctaaaaaacaccttcataa 21396000  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    ||||||||||||||| |||||||    
T  21396001 aaggtgtcttctagcaaaaccct 21396023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 19855584 - 19855463
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||   ||| |||||||||||| |||||| |||||||    
T  19855584 ctttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcgtagaataacttgctaatagacaccttcataa 19855485  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    ||||| |||||| || ||||||    
T  19855484 aaggtttcttctcgcaaaaccc 19855463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 54253835 - 54253956
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| ||||||  |||| |||||||||||||| |||| |||||||    
T  54253835 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaggaaatgctcatagaataacttgctaaaatacaccttcataa 54253934  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    || | |||||||||| ||||||    
T  54253935 aatgcgtcttctagcaaaaccc 54253956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 54411832 - 54411952
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||||   |||| ||| |||||||||| |||| |||||||    
T  54411832 ctttttagttataactttgctaaaaaacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaaaacaccttcataa 54411931  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||||||||||||||| |||||    
T  54411932 aaggtgtcttctagcaaaacc 54411952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 34673519 - 34673622
Alignment:
Q  11 ataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttc 110  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| |  |||  ||||||||||||||||||| ||||||||||||||||||    
T  34673519 ataacttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcataaaaggtgtcttc 34673618  T
Q  111 tagc 114  Q
    ||||    
T  34673619 tagc 34673622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 50090870 - 50090993
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || |||||||  ||| ||||||||||||||||||||||||| | ||||||   |||| ||||||||||||||||||| |||||||    
T  50090870 ctttttagttataattttgctaaaaaacactttcataaaaattagttggtgtctttcaccaaatgttaatagaataacttgctaaaagacaccttcataa 50090969  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    ||||||||||||||| ||||||||    
T  50090970 aaggtgtcttctagcaaaaccctt 50090993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 13700290 - 13700413
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||  | || |||||||  ||||| |||| |||||||    
T  13700290 ctttttagttataactttgttaaaagataccttcataaaaattagttggtgtcttttagcaaatgctcaaagaataacttattaaaaaacaccttcataa 13700389  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    || |||||||||||| ||||||||    
T  13700390 aatgtgtcttctagcaaaaccctt 13700413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 52945689 - 52945571
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||| |||||||  || | ||||||||||||||||||| |||||||    
T  52945689 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgccttttaccaaatgctcattgaataacttgctaaaagacactttcataa 52945590  T
Q  100 aaggtgtcttctagctaaac 119  Q
    || || ||||||||| ||||    
T  52945589 aatgt-tcttctagcaaaac 52945571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 35711884 - 35711990
Alignment:
Q  16 ttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagct 115  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||  |||| |||||||||||||||||||  || ||||| ||||||||||||     
T  35711884 ttgctaaaagacaccttcataaaagttagctggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccctcgtaaaatgtgtcttctagca 35711983  T
Q  116 aaaccct 122  Q
    |||||||    
T  35711984 aaaccct 35711990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 42092927 - 42092803
Alignment:
Q  2 tttttagttataactt-gctaaaagg-caccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||||| |||||||   |||||| |||||||||| ||||||||||||| ||||  |  |||| ||||||||||||||||||| |||||||    
T  42092927 tttttagttataactttgctaaaaaaacacctttataaaaattaattggtgtcttttaacaaagactcatagaataacttgctaaaagacaccttcataa 42092828  T
Q  100 aaggtgtcttctagctaaaccctta 124  Q
    ||||||||||||||| |||||||||    
T  42092827 aaggtgtcttctagcaaaaccctta 42092803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20513071 - 20513180
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||  ||||||||||||||||| ||||||||||||| |||||||  |||| |||| |||||||||||||| |||||||    
T  20513071 ctttttagttataactttgttaaaaaacaccttcataaaaattaattggtgtcttttaacaaatgctcatagaataaattgctaaaagacaccttcataa 20513170  T
Q  100 aaggtgtctt 109  Q
    || |||||||    
T  20513171 aaagtgtctt 20513180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34673384 - 34673485
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||| |  |||  ||||||||||||||||||| |||||||    
T  34673384 ctttttagttataactttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcataa 34673483  T
Q  100 aa 101  Q
    ||    
T  34673484 aa 34673485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 5232684 - 5232778
Alignment:
Q  27 caccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    |||||| |||||||||||||||||||||||| ||||||| | ||| ||||||||||||| ||||| ||||||||| ||||||| |||| ||||||    
T  5232684 cacctttataaaaattagttggtgtcttttaacaaatgcttctagaataacttgctaaatgacaccttcataaaatgtgtcttgtagcaaaaccc 5232778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 34673457 - 34673547
Alignment:
Q  11 ataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| |  |||  ||||||||||||||||||| |||||||||    
T  34673457 ataacttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatactaatataataacttgctaaaagacaccttcataaaa 34673547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38101229 - 38101331
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||   |||| ||| ||| |||||| |||| |||||||    
T  38101229 ctttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttactaaaaaacaccttcataa 38101328  T
Q  100 aag 102  Q
    |||    
T  38101329 aag 38101331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 27432149 - 27432049
Alignment:
Q  16 ttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgct-aaaagacacattcataaaaggtgtcttctagc 114  Q
    |||||||||  ||||||||||||||||| |||||||||||||| ||||||| |||| ||||||| || ||||||||  |||||||||| |||||||||||    
T  27432149 ttgctaaaaaacaccttcataaaaattatttggtgtcttttagtaaatgcccatagaataacttactaaaaagacatcttcataaaagatgtcttctagc 27432050  T
Q  115 t 115  Q
    |    
T  27432049 t 27432049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 52089162 - 52089066
Alignment:
Q  1 ctttttagttataa-cttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattca 96  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||  ||||| |||||  ||||||||||||||||||| ||||    
T  52089162 ctttttagttataaacttgctaaaagacaccttcataaatattagttggtgttttttaataaatgtctatacaataacttgctaaaagacaccttca 52089066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 41355533 - 41355442
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||||  || | |||||||| ||||||||||    
T  41355533 ctttttagttataactttgctataagacaccttcataaaaattagttggtgtcttttaacaaatgctcattgaataacttgttaaaagacac 41355442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 11238786 - 11238690
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattca 96  Q
    ||||||||||||||||| | |||||  || |||||||||||||||||| ||||||||| |||||||  |||| ||||||||||||||||||| ||||    
T  11238786 ctttttagttataactttgttaaaatacatcttcataaaaattagttgatgtcttttaacaaatgctcatagaataacttgctaaaagacaccttca 11238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 53518909 - 53518997
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaaga 88  Q
    ||||||||||||||||| | |||||| ||| ||||||||||||| ||||||||||||| |||||||| ||||||||| || ||||||||    
T  53518909 ctttttagttataactttgttaaaagacactttcataaaaattaattggtgtcttttaacaaatgccaataggataattttctaaaaga 53518997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9665429 - 9665306
Alignment:
Q  1 ctttttagttataacttgctaaaagg-caccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||||||   |||||  ||||||||||||||||||||  ||||||||| ||||||   |||| |||||||| |||||||||| ||||||     
T  9665429 ctttttagttataactttgcaaaagaacaccttcataaaaattagttaatgtcttttaacaaatgttaatagaataacttgttaaaagacaccttcatag 9665330  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    |||||||||| || | ||||||||    
T  9665329 aaggtgtcttttaacaaaaccctt 9665306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 19228663 - 19228596
Alignment:
Q  20 taaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaag 87  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||||    
T  19228663 taaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataatttgctaaaag 19228596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35280528 - 35280437
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||| || ||||||| |||||||  |||  |||||||||||||||||||    
T  35280528 ctttttagttataactttgctaaaaaacaccttcataaaaattagtttgtatcttttaacaaatgctcatataataacttgctaaaagacac 35280437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4126093 - 4125996
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcat 97  Q
    ||||||| ||||||||| ||||||||  || ||||||||||||| ||| |||||||||||||||||  |||| |||||||| |||||||||| |||||    
T  4126093 ctttttaattataactttgctaaaagatacattcataaaaattaattgatgtcttttagcaaatgctcatagaataacttgttaaaagacaccttcat 4125996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21482009 - 21481947
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaa 62  Q
    ||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||    
T  21482009 ctttttagttataactttgttaaaagacaccttcataaaaattagctggtgtcttttagcaaa 21481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 39867131 - 39867232
Alignment:
Q  21 aaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    ||||| ||||||||||||||||||||||| || ||||  |||||  ||||| |||| ||| |||| ||||| ||||||||| || ||||||||| |||||    
T  39867131 aaaagacaccttcataaaaattagttggtatcatttaagaaatgtttatagaataatttgataaatgacaccttcataaaatgtttcttctagcaaaacc 39867230  T
Q  121 ct 122  Q
    ||    
T  39867231 ct 39867232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27026677 - 27026741
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatg 64  Q
    |||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  27026677 ctttttagttataattttgctaaaagacaccttcctaaaaattagttggtgtcttttaacaaatg 27026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27418803 - 27418847
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagt 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  27418803 ctttttagttataacttgctaaaagacaccttcataaaaattagt 27418847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27038023 - 27038086
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    |||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| |||||    
T  27038023 ctttttagttataattttgctaaaagacaccttcataaaaatgagttggtgtcttttaacaaat 27038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 27027333 - 27027379
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  27027333 ataacttgctaaaagacaccttcataaaaggtgtcttctagcaaaac 27027379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 38507978 - 38508018
Alignment:
Q  146 aactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  38507978 aactagatcgcctacccgtgctgtcgcacgggtcatttata 38508018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50801601 - 50801673
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  50801601 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 50801673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50874279 - 50874207
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  50874279 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 50874207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 53581586 - 53581658
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| | |||||||||| ||||||||    
T  53581586 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcttagcaaatgtctatagga 53581658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 53467516 - 53467449
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgccta 68  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| || |||||||||||||    
T  53467516 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgccta 53467449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 46354116 - 46354034
Alignment:
Q  20 taaaaggcaccttcataaaaattagttggtg-tcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    |||||| ||| |||||||||||||||||||| | ||||| ||||| | ||||  |||||||| |||||||||| |||||||||    
T  46354116 taaaagacactttcataaaaattagttggtgtttttttaacaaatacttataaaataacttgttaaaagacactttcataaaa 46354034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 46770541 - 46770495
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    ||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  46770541 ataacttgctaaaagacaccttcataaagggtgtcttctagcaaaac 46770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26152524 - 26152455
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||| ||||||    
T  26152524 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctata 26152455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46770551 - 46770514
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaa 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  46770551 ctttttagttataacttgctaaaagacaccttcataaa 46770514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27317666 - 27317738
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||   |||||| ||| | ||| || ||||||||||||||||||    
T  27317666 ctttttagttataacttgctaaaacacaccttttaaaaaataagtggatgtattctagcaaatgcctatagga 27317738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31039722 - 31039650
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  || ||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  31039722 ctttttagttataacttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 31039650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 35180693 - 35180573
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||| ||||||||| | |||||| ||  ||||||||||||| ||| ||| ||||| |||||||  |||  |||||||  |||||||||| |||||||    
T  35180693 ctttttaattataactttgttaaaagacaatttcataaaaattaattgatgtattttaacaaatgctaataaaataactttttaaaagacaccttcataa 35180594  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||  | ||||||||| |||||    
T  35180593 aatatatcttctagcaaaacc 35180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 45408423 - 45408392
Alignment:
Q  30 cttcataaaaattagttggtgtcttttagcaa 61  Q
    ||||||||||||||||||||||||||||||||    
T  45408423 cttcataaaaattagttggtgtcttttagcaa 45408392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3269247 - 3269185
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  3269247 ctttttagttataacttgctaaaacactcccacataaaaattagtaggtgtgttctagcaaat 3269185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4043660 - 4043734
Alignment:
Q  1 ctttttagttata-acttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggat 74  Q
    ||||||||||||  |||||||||||  | |||||  |||||| ||||||||| || |||||||||||||||||||    
T  4043660 ctttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggat 4043734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6109178 - 6109116
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  6109178 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 6109116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6114962 - 6115024
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  6114962 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 6115024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8814805 - 8814875
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatag 71  Q
    ||||||| | ||||||||||||||  |||||||| |||||| ||| ||||| || |||||||||| |||||    
T  8814805 ctttttaatcataacttgctaaaacacaccttcaaaaaaataagtgggtgtattctagcaaatgcttatag 8814875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17226216 - 17226154
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  17226216 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 17226154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 21481777 - 21481723
Alignment:
Q  54 tttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtct 108  Q
    |||||||||||| ||||| |||||||| |||||||||  ||||| ||||||||||    
T  21481777 tttagcaaatgcttatagaataacttgataaaagacatcttcattaaaggtgtct 21481723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 26103779 - 26103729
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtc 52  Q
    |||||||||||||||||||||||| |||||||  |||||| ||| ||||||    
T  26103779 tttttagttataacttgctaaaagacaccttctaaaaaataagtgggtgtc 26103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7521539 - 7521608
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    |||||||||||||||||| |||||  | ||  ||||||||||||| ||||| || |||||||| ||||||    
T  7521539 ctttttagttataacttgttaaaatactcccacataaaaattagtgggtgtgttctagcaaatccctata 7521608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21727826 - 21727895
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||| ||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||| ||||||    
T  21727826 ctttttaattataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctata 21727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32203180 - 32203249
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    |||| |||||||||||||||||||  ||| |||  |||||| ||| ||||| || |||||||||||||||    
T  32203180 ctttctagttataacttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctata 32203249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 46969954 - 46969995
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    |||||||||||||| ||||||||| |||||||||||| ||||    
T  46969954 ttgctaaaagacaccttcataaaatgtgtcttctagcaaaac 46969995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1376163 - 1376091
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| | ||| |  ||||||||||||||||||    
T  1376163 ctttttagttataacttgctaaaacacacattctaaaaaataagtggatgtatcctagcaaatgcctatagga 1376091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 4043966 - 4043938
Alignment:
Q  29 ccttcataaaaattagttggtgtctttta 57  Q
    |||||||||||||||||||||||||||||    
T  4043966 ccttcataaaaattagttggtgtctttta 4043938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12127568 - 12127640
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||| ||||||||  |||||||  |||||| ||| ||||| |  ||| ||||||||||||||    
T  12127568 ctttttagttataacatgctaaaacacaccttctaaaaaataagtgggtgtatcctagaaaatgcctatagga 12127640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13349162 - 13349230
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctat 69  Q
    ||||||||||||||||||||||||  | |||||  |||||| ||| ||||| |  ||||||||||||||    
T  13349162 ctttttagttataacttgctaaaacacgccttctaaaaaataagtgggtgtatcctagcaaatgcctat 13349230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 46832153 - 46832193
Alignment:
Q  146 aactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    ||||||||||||||||| |||||||||||| ||||| ||||    
T  46832153 aactagatctcctacccatgctgtcgcacgtgtcatatata 46832193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27131115 - 27130995
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  27131115 ctttttagttataacttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgcctataagataacttgctaaaaaacaccttcataaa 27131016  T
Q  101 aggtgtcttctagctaaaccc 121  Q
     ||||||||||||| ||||||    
T  27131015 gggtgtcttctagcaaaaccc 27130995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 42373495 - 42373626
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| |||||| | ||||||||| |||||||||||||||||||||||    
T  42373495 ctttttagttagaacttgctaaaagacatcttcataaaaattaattggtgtcttttaacaaatgtcaataggataatttgctaaaagacacattcataaa 42373594  T
Q  101 aggtgtcttctagctaaacccttaattatata 132  Q
    |||||||||||||| ||||||||  |||||||    
T  42373595 aggtgtcttctagcaaaacccttttttatata 42373626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 38368277 - 38368165
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||   ||| |||| |||||||||||||||||||||||||    
T  38368277 tttttagttataacttgctaaaatacaccttcataaaaattagttggtgtcttttagcaaatgttaatatgatatcttgctaaaagacacattcataaaa 38368178  T
Q  102 ggtgtcttctagc 114  Q
    |||||||||||||    
T  38368177 ggtgtcttctagc 38368165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 5995090 - 5995210
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||| ||||||||    
T  5995090 tttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatataataacttgctaaaagacactttcataaa 5995189  T
Q  101 aggtgtcttctagctaaaccc 121  Q
    |||||||||||||| ||||||    
T  5995190 aggtgtcttctagcaaaaccc 5995210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24251947 - 24251831
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||| ||||||||    
T  24251947 ctttttagttataacttgttaaaagacaccttcataaaaattaattggtgtcttttagcaaatgcttataggataacttgct--aatacaccttcataaa 24251850  T
Q  101 aggtgtcttctagctaaac 119  Q
    |||||||||||||| ||||    
T  24251849 aggtgtcttctagcaaaac 24251831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21993589 - 21993475
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||  |||| ||||||||||||||||||| |||||||    
T  21993589 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaaaaaatgctaatagaataacttgctaaaagacaccttcataa 21993490  T
Q  100 aaggtgtcttctagc 114  Q
    || ||||||||||||    
T  21993489 aatgtgtcttctagc 21993475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 35983226 - 35983106
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||  |||| ||||||||||||||||||  |||||||    
T  35983226 ctttttagttataactttgctaaaagataccttcataaaaattaattggtgtcttttagcaaatgctcatagaataacttgctaaaagacatcttcataa 35983127  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || |||||||||||| |||||    
T  35983126 aatgtgtcttctagcaaaacc 35983106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36004638 - 36004518
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||  |||| ||||||||||||||||||  |||||||    
T  36004638 ctttttagttataactttgctaaaagataccttcataaaaattaattggtgtcttttagcaaatgctcatagaataacttgctaaaagacatcttcataa 36004539  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || |||||||||||| |||||    
T  36004538 aatgtgtcttctagcaaaacc 36004518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48709072 - 48709156
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaa 85  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48709072 ctttttagtaataacttgctaaaagacaccttcataaaaattagttagtgtcttttagcaaatgcctataggataacttgctaaa 48709156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 48227267 - 48227389
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||   |||| ||| |||||||||| |||| |||||||    
T  48227267 ctttttagttataactttgctaaaagacacctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaatacaccttcataa 48227366  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    ||||||||||| ||| |||||||    
T  48227367 aaggtgtcttccagcaaaaccct 48227389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 3203345 - 3203450
Alignment:
Q  18 gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaa 117  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||  |||| ||||||||||||||||||| |||||||||||| ||||||||| ||    
T  3203345 gctaaaagacaccttcataaaaattagttggtgtctttaaacaaatgctcatagaataacttgctaaaagacaccttcataaaaggtatcttctagcaaa 3203444  T
Q  118 accctt 123  Q
    ||||||    
T  3203445 accctt 3203450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 46003768 - 46003897
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcct-ataggataacttgctaaaagacacattcata 98  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| | ||||  |||||||||||||||||| |||||     
T  46003768 ctttttagttataactttgctaaaagacacctttataaaaattagttgatgtcttttagcaaatgcttcatagagtaacttgctaaaagacaccttcatg 46003867  T
Q  99 aaaggtgtcttctagctaaacccttaatta 128  Q
    ||| |||||||||||| |||||| ||||||    
T  46003868 aaatgtgtcttctagcaaaacccataatta 46003897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41378407 - 41378527
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||   |||| |||||||||||||| |||| || ||||    
T  41378407 ctttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttagcaaatgttcatagaataacttgctaaaaaacaccttaataa 41378506  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || |||||||||||| |||||    
T  41378507 aaagtgtcttctagcaaaacc 41378527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 43077530 - 43077650
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||| |||||| | |||| | |||||||||||| |||| ||||||||    
T  43077530 tttttagttataactttgctaaaagaaaccttgataaaaattagttggtgtcttttaacaaatgtcaatagaaaaacttgctaaaaaacaccttcataaa 43077629  T
Q  101 aggtgtcttctagctaaaccc 121  Q
    |||||||||||||| ||||||    
T  43077630 aggtgtcttctagcaaaaccc 43077650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 20568377 - 20568264
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaa-ttagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| |||||| ||| |||||| ||||||| ||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  20568377 ctttttagttataatttgctacaagacaccttgataaaaaattacttggtgtcttttagcaaatgttaataggataacttgctaaaagacacattcataa 20568278  T
Q  100 aaggtgtcttctag 113  Q
    | ||||| ||||||    
T  20568277 agggtgttttctag 20568264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 27946861 - 27946978
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||  |||||| ||||||||||||||||||| | ||||||     
T  27946861 tttttagttataatttgttaaaagacaccttcataaaaattagttggtgtgttttaacaaatagctatagaataacttgctaaaagacacctccataaag 27946960  T
Q  102 ggtgtcttctagctaaac 119  Q
     |||||||||||| ||||    
T  27946961 agtgtcttctagcaaaac 27946978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 45100090 - 45099969
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||  || | |||||||| ||||| |||| |||||||    
T  45100090 ctttttagttgtaactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcattgaataacttgttaaaaaacaccttcataa 45099991  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    || |||||||||||| ||||||    
T  45099990 aatgtgtcttctagcaaaaccc 45099969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 41037244 - 41037132
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||| |||||||  |||| |||| || ||||||||||| |||||||    
T  41037244 ctttttagttataactttgctaaaagacaccttcataaaacttagtttgtgtcttttaccaaatgctcatagaataatttactaaaagacaccttcataa 41037145  T
Q  100 aaggtgtcttcta 112  Q
    |||||||||||||    
T  41037144 aaggtgtcttcta 41037132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12362869 - 12362980
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||| |||||| ||| |||||| || ||||||||||||| |||| ||||||||| |||||| |||||| |||||||| |||||||||||||||||||    
T  12362869 ctttttaattataatttgttaaaagacatcttcataaaaatttgttgatgtcttttaacaaatgtctatagaataacttgttaaaagacacattcataaa 12362968  T
Q  101 aggtgtcttcta 112  Q
     |||||||||||    
T  12362969 gggtgtcttcta 12362980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 31953278 - 31953155
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||  ||||||||||||||||| ||| ||||||||| |||||||  ||||  |||||||||||||||||| |||||||    
T  31953278 ctttttagttataactttgttaaaaaacaccttcataaaaattaattgatgtcttttaacaaatgctcatagactaacttgctaaaagacaccttcataa 31953179  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    ||||||| ||||||| ||||||||    
T  31953178 aaggtgtgttctagcaaaaccctt 31953155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 3961295 - 3961182
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||| || |||||||  |||||| |||||||||||||||||||||||| ||||||   |||| ||||||||||||||||||| ||||||||    
T  3961295 tttttagttataattttgctaaaaaacaccttaataaaaattagttggtgtcttttaacaaatgatcatagaataacttgctaaaagacactttcataaa 3961196  T
Q  101 aggtgtcttctagc 114  Q
    | ||||||||||||    
T  3961195 atgtgtcttctagc 3961182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 35221701 - 35221825
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgc-----ctataggataacttgctaaaagacacatt 94  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||       |||| ||||||||||||||||||| ||    
T  35221701 ctttttagttataacttagctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaatagaataacttgctaaaagacacctt 35221800  T
Q  95 cataaaaggtgtcttctagctaaac 119  Q
    ||||||| || ||||||||| ||||    
T  35221801 cataaaaagtatcttctagcaaaac 35221825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41585915 - 41586002
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaag 87  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||  |||| ||||| |||||||||    
T  41585915 ctttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatagaataacctgctaaaag 41586002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9522502 - 9522619
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||   ||||||||||||||||||||||| |||| |   |||  |||||||||||||||||  |||||||    
T  9522502 ctttttagttataactttgataaaagacacctt---aaaaattagttggtgtcttttaggaaatcctcgtagattaacttgctaaaagacatcttcataa 9522598  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || |||||||||||| |||||    
T  9522599 aatgtgtcttctagcaaaacc 9522619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24611535 - 24611437
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcata 98  Q
    ||||||||||||||||| | |||||| ||| ||||||||||||||||||| |||||||  ||||||  | || ||||||||||||||||||| ||||||    
T  24611535 ctttttagttataactttgttaaaagacactttcataaaaattagttggtatcttttaataaatgctcagagaataacttgctaaaagacaccttcata 24611437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 3875189 - 3875107
Alignment:
Q  37 aaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    |||||||||||||  |||||| ||||||  |||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  3875189 aaaattagttggt--cttttaacaaatgtttataggataacttgctaaaatacactttcataaaatgtgtcttctagcaaaaccc 3875107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 42090320 - 42090242
Alignment:
Q  34 ataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttcta 112  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| ||||||||| |||  || ||||||||| |||||||    
T  42090320 ataaaaattaattggtgtcttttagtaaatgtctataggataatttgctaaaaaacatttttataaaaggtatcttcta 42090242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26928001 - 26928054
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtct 53  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  26928001 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtct 26928054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25818522 - 25818594
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| || ||||||||||||||||||    
T  25818522 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctatagga 25818594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 32392287 - 32392334
Alignment:
Q  75 aacttgctaaaagacacattcataaaaggtgtcttctagctaaaccct 122  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||    
T  32392287 aacttgctaaaagacaccttcataaaaggtgtcttctagcaaaaccct 32392334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 20417981 - 20418022
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  20417981 ataatttgctaaaagacacattcataaaaggtgtcttctagc 20418022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44868038 - 44868099
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaa 62  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||| |||||||| |||||||    
T  44868038 ctttttagttataacttgttaaaaaacactttcataaaaattagtgggtgtcttctagcaaa 44868099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2509478 - 2509407
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||| ||||||| ||| ||||| || |||||||||| |||||||    
T  2509478 ctttttagttataacttgctaaaacacaccttc-taaaaataagtgggtgtattctagcaaatgcatatagga 2509407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18352474 - 18352402
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| || ||||||||||||||||||    
T  18352474 ctttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgcctatagga 18352402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41037396 - 41037468
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| ||| |||| || | | ||||| |||||||||||||||||||||    
T  41037396 ctttttagttataacttgctaaaacacacattcttaaatataactgggtgtattttagcaaatgcctatagga 41037468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41407380 - 41407452
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| || ||||||||||||||||||    
T  41407380 ctttttagttataacttgctaaaacacactttctaaaaaataagtgggtgtattctagcaaatgcctatagga 41407452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3350050 - 3350112
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaa 62  Q
    |||||||||||||| || |||||||| ||||||||| |||| ||||||||||||| |||||||    
T  3350050 ctttttagttataattttgctaaaagacaccttcattaaaagtagttggtgtcttctagcaaa 3350112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15957372 - 15957299
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttc-ataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||| | |||||| ||||||||| |  ||||||||| ||||||||    
T  15957372 ctttttagttataacttgctaaaacacaccttctaaaaaaataagttggtgtatcctagcaaatgtctatagga 15957299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 938933 - 939005
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||   |||||| ||| ||||| |  ||||||||||||||||||    
T  938933 ctttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctatagga 939005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2936678 - 2936750
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||| ||||||    
T  2936678 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgccaatagga 2936750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3407183 - 3407227
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagt 45  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||    
T  3407183 ctttttagttataacttgctaaaagacagcttcataaaaactagt 3407227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 14313999 - 14313959
Alignment:
Q  72 gataacttgctaaaagacacattcataaaaggtgtcttcta 112  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  14313999 gataacttgctaaaagacaccttcataaaaggtatcttcta 14313959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28912120 - 28912192
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||| ||||||    
T  28912120 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcccatagga 28912192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38368014 - 38367942
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||   |||||| ||| | ||| || ||||||||||||||||||    
T  38368014 ctttttagttataacttgctaaaacacaccttttaaaaaataagtggctgtattctagcaaatgcctatagga 38367942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 48624998 - 48625042
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaaccct 122  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||    
T  48624998 ttgctaaaagacaccttcataaaaggtgtcttatagcaaaaccct 48625042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 36343088 - 36343021
Alignment:
Q  34 ataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    |||||||||||||||||||||||| |||||||  |||  |||||||| ||||| |||  |||||||||    
T  36343088 ataaaaattagttggtgtcttttaacaaatgctcataaaataacttgttaaaaaacatcttcataaaa 36343021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 45832987 - 45832944
Alignment:
Q  147 actagatctcctacccgtgctgtcgcacgggtcatttataatgt 190  Q
    |||||||| || ||||||||||||||||||||||| ||||||||    
T  45832987 actagatccccaacccgtgctgtcgcacgggtcatatataatgt 45832944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4655236 - 4655298
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  4655236 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 4655298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 28059314 - 28059379
Alignment:
Q  53 ttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    |||||||||||||  |||| ||||||| ||||||||  | |||||||||||||||||||||| ||||    
T  28059314 ttttagcaaatgctcatagaataacttcctaaaagatcc-ttcataaaaggtgtcttctagcaaaac 28059379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45225298 - 45225372
Alignment:
Q  1 ctttttagttat-aacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggat 74  Q
    |||||||||||| ||||||||||||  | |||||  |||||| ||| ||||| || |||||||||||||||||||    
T  45225298 ctttttagttattaacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaatgcctataggat 45225372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45225580 - 45225642
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  45225580 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 45225642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6736669 - 6736596
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttc-ataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||| ||| |||||  ||||||| | |||||| ||| ||||| || ||||||||||||||||||    
T  6736669 ctttttagttataatttgttaaaacacaccttctaaaaaaataagtaggtgtattctagcaaatgcctatagga 6736596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11766159 - 11766228
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  |||||||||| ||||    
T  11766159 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcatata 11766228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23740076 - 23740149
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttc-ataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||| |||||  ||||||| | |||||| ||| ||||| || || |||||||||||||||    
T  23740076 ctttttagttataacttgttaaaacacaccttctaaaaaaataagtaggtgtattctaacaaatgcctatagga 23740149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 454142 - 454214
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||| ||||||||||||  |||||||  |||||| ||| ||||| |  || |||||||||||||||    
T  454142 ctttttagttaaaacttgctaaaatacaccttctaaaaaataagtgggtgtatcctaacaaatgcctatagga 454214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 3875249 - 3875209
Alignment:
Q  9 ttataacttgctaaaaggcaccttcataaaaattagttggt 49  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  3875249 ttataacttgttaaaagaaaccttcataaaaattagttggt 3875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9401814 - 9401742
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||| ||||||| ||||||||  |||| ||  |||||| ||| ||||| || ||||||||||||||||||    
T  9401814 ctttttaattataacatgctaaaacacaccatctaaaaaataagtgggtgtattctagcaaatgcctatagga 9401742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27168411 - 27168351
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaa 61  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| | |||||||    
T  27168411 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatgttagcaa 27168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 28333815 - 28333851
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    |||||||||||||| |||||| |||||||||||||||    
T  28333815 ttgctaaaagacaccttcatacaaggtgtcttctagc 28333851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 44118273 - 44118241
Alignment:
Q  146 aactagatctcctacccgtgctgtcgcacgggt 178  Q
    ||||||||| |||||||||||||||||||||||    
T  44118273 aactagatcccctacccgtgctgtcgcacgggt 44118241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 12176244 - 12176365
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  12176244 ctttttagttataacctgctaaaagacaccttgataaaaattatttggtgtcttttagcaattgcctataggataacttgctaaaacacaccttcataaa 12176343  T
Q  101 aggtgtcttctagctaaaccct 122  Q
    |||||||||||||| |||||||    
T  12176344 aggtgtcttctagcaaaaccct 12176365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 12420672 - 12420793
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  12420672 ctttttagttataacctgctaaaagacaccttgataaaaattatttggtgtcttttagcaattgcctataggataacttgctaaaacacaccttcataaa 12420771  T
Q  101 aggtgtcttctagctaaaccct 122  Q
    |||||||||||||| |||||||    
T  12420772 aggtgtcttctagcaaaaccct 12420793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 10078408 - 10078303
Alignment:
Q  16 ttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagct 115  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||     
T  10078408 ttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataaaaggtgtcttctagca 10078309  T
Q  116 aaaccc 121  Q
    ||||||    
T  10078308 aaaccc 10078303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26912359 - 26912480
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  26912359 cttttcagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaaagacacattcataa 26912458  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    || |||||||||||| ||||||    
T  26912459 aatgtgtcttctagcaaaaccc 26912480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 28539283 - 28539155
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||  |||  |||||||||||||||||| ||||||||    
T  28539283 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttaacaaatgctcataaaataacttgctaaaagacatattcataa 28539184  T
Q  100 aaggtgtcttctagctaaacccttaatta 128  Q
    || |||||||||| | |||||||||||||    
T  28539183 aatgtgtcttctaacaaaacccttaatta 28539155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 38498287 - 38498407
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||   |||| ||||||||||||||||||| |||||||    
T  38498287 ctttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgttaatagaataacttgctaaaagacaccttcataa 38498386  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||||||||||||||| |||||    
T  38498387 aaggtgtcttctagcaaaacc 38498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 39077320 - 39077432
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||   |||| ||||||||||||||||||| |||||||    
T  39077320 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaagacaccttcataa 39077419  T
Q  100 aaggtgtcttcta 112  Q
    |||||||||||||    
T  39077420 aaggtgtcttcta 39077432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 23472633 - 23472512
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |  |||| ||||| ||||||||||||| |||||||    
T  23472633 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttagcaaatcctcatagaataac-tgctaaaagacaccttcataa 23472535  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    ||||||||||||||| |||||||    
T  23472534 aaggtgtcttctagcaaaaccct 23472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12295203 - 12295317
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||| ||||| ||||||| |||||||  |||| |||||||||||||||||||||||||||    
T  12295203 ctttttagttataactttgctaaaagacaccttcataaaatttaattggtatcttttaacaaatgctaatagaataacttgctaaaagacacattcataa 12295302  T
Q  100 aaggtgtcttctagc 114  Q
    |||||||||| ||||    
T  12295303 aaggtgtcttatagc 12295317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9479534 - 9479413
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||| |||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  9479534 ctttttagttataactttgttaaaagacactttcataaaaattagtttgtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataa 9479435  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    || |||||||||| | ||||||    
T  9479434 aatgtgtcttctaacaaaaccc 9479413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 44874016 - 44873920
Alignment:
Q  16 ttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttcta 112  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||  |||| |||||||||||||| |||| ||||||||||||||||||||    
T  44874016 ttgctaaaagacaccttcataaaaattagctggtgtcttttagcaaatgctcatagaataacttgctaaaaaacaccttcataaaaggtgtcttcta 44873920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 13326968 - 13327089
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||| ||||||||||||||| | |||  |||||||||||||||| || ||||||||    
T  13326968 ctttttagttataacttgataaaagacaacttcataaaaattagttggcgtcttttagcaaatgtc-ataaaataacttgctaaaagataccttcataaa 13327066  T
Q  101 aggtgtcttctagctaaaccctt 123  Q
    | |||||||||||| ||| ||||    
T  13327067 atgtgtcttctagcaaaatcctt 13327089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 33568106 - 33568228
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||  |||| |||||||| |||||||||| || |||||    
T  33568106 tttttagttataactttgctaaaagacaccttcataaaaactagttggtgtcttttaacaaatgctcatagaataacttgataaaagacacctttataaa 33568205  T
Q  101 aggtgtcttctagctaaaccctt 123  Q
    | |||||||||| | ||||||||    
T  33568206 atgtgtcttctaacaaaaccctt 33568228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 30774217 - 30774124
Alignment:
Q  28 accttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    |||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  30774217 accttcataaaaattagttggtatcttttagcaaatgctcatagaataacttgctaaaaaacaccttcataaaaggtgtcttctagcaaaaccc 30774124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16930841 - 16930953
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||  ||||||  |||| ||||||||||||||||||| |||||||    
T  16930841 ctttttagttataactttgctaaaaaacactttcataaaaattagttggtgtcttttaaaaaatgctcatagaataacttgctaaaagacaccttcataa 16930940  T
Q  100 aaggtgtcttcta 112  Q
    ||||| |||||||    
T  16930941 aaggtatcttcta 16930953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 14041450 - 14041327
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||| |||| |||||||    
T  14041450 ctttttagttataactttgttaaaagacaccttcataaaaattaattggtgttttttaacaaatgtcaataggataacttgctaaaaaacaccttcataa 14041351  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    ||| ||| |||| || ||||||||    
T  14041350 aagatgttttctggcaaaaccctt 14041327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 40067589 - 40067702
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || | |||||  ||||||||||||||||||||||||||||||| |||||   ||||| |||||||||||||||||||||||||||    
T  40067589 ctttttagttataattttgttaaaatacaccttcataaaaattagttggtgtcttttaacaaatatttatagaataacttgctaaaagacacattcataa 40067688  T
Q  100 aaggtgtcttctag 113  Q
    | | ||||||||||    
T  40067689 atgatgtcttctag 40067702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9478831 - 9478719
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||   |||| |||||||||||||| |||  ||||| |    
T  9478831 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgctaaaaaacattttcatta 9478732  T
Q  100 aaggtgtcttcta 112  Q
    |||||||||||||    
T  9478731 aaggtgtcttcta 9478719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 5224418 - 5224300
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||   |||| |||||||| |||||||||| |||||||    
T  5224418 ctttttagttataactttgctaaaaa-caccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagacaccttcataa 5224320  T
Q  100 aaggtgtcttctagctaaac 119  Q
    || ||||||| |||| ||||    
T  5224319 aaagtgtcttatagcaaaac 5224300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 16784422 - 16784331
Alignment:
Q  28 accttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    |||||||||||||||||||||||||||||| ||||||   |||  ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  16784422 accttcataaaaattagttggtgtcttttaacaaatgttaatataataacttgctaaaagacaccttcataaaaggtgtcttctagcaaaac 16784331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 42806331 - 42806210
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatg--cctataggataacttgctaaaagacacattcat 97  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| || ||||||  | ||||  |||| |||||||||||||  |||||    
T  42806331 ctttttagttataactttgctaaaagacaccttcataaaaattagtttgtgtcttctaacaaatgctcatataaaataatttgctaaaagacatcttcat 42806232  T
Q  98 aaaaggtgtcttctagctaaac 119  Q
    ||||||||||||||||| ||||    
T  42806231 aaaaggtgtcttctagcaaaac 42806210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1271060 - 1271182
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtctt----ttagcaaatgcctataggataacttgctaaaagacacattca 96  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||    ||||||||| | |||||||||||||| ||||| |||| || |    
T  1271060 ctttttaattataacttgttaaaagacaccttcataaaaattagttggtgtattttaattagcaaatacatataggataacttgttaaaaaacaccttta 1271159  T
Q  97 taaaaggtgtcttctagctaaac 119  Q
    |||| ||||||||||||| ||||    
T  1271160 taaagggtgtcttctagcaaaac 1271182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 14916699 - 14916797
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcata 98  Q
    |||||| |||||||||| | ||||||  |||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||| |||||||||||    
T  14916699 cttttttgttataactttgttaaaagataccttcataaaaattagttggtatcttttagcaaatgctcatagaataacttgctaaaaaacacattcata 14916797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22812359 - 22812472
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| |||||||  |||| ||||| |||||||||| ||  | ||||    
T  22812359 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcatagaataacgtgctaaaagatac-ctaataa 22812457  T
Q  100 aaggtgtcttctagc 114  Q
    || ||||||||||||    
T  22812458 aatgtgtcttctagc 22812472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 253987 - 254078
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    ||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||| ||||||   |||| |||||||| ||||||||||    
T  253987 ctttttagttataactttgctaaaagacactttcctaaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagacac 254078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 661871 - 661780
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    ||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||| ||||||   |||| |||||||| ||||||||||    
T  661871 ctttttagttataactttgctaaaagacactttcctaaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagacac 661780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28969137 - 28969244
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | ||||||  || ||||||||||||| ||||||||||||| |||||||  |||| |||| ||||||||| |||| |||| ||    
T  28969137 ctttttagttataactttgttaaaagatactttcataaaaattaattggtgtcttttaacaaatgctcatagaataaattgctaaaaaacaccttca-aa 28969235  T
Q  100 aaggtgtct 108  Q
    |||||||||    
T  28969236 aaggtgtct 28969244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 19922628 - 19922565
Alignment:
Q  3 ttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgc 65  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  19922628 ttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgc 19922565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31272811 - 31272921
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || |||||||| || ||| |||||||||||||| ||||||||| ||||| |  |||| |||| ||| ||||| |||| |||||||    
T  31272811 ctttttagttataattttgctaaaagacatctttataaaaattagttgttgtcttttaacaaatactcatagaataatttgttaaaaaacaccttcataa 31272910  T
Q  100 aaggtgtcttc 110  Q
    || ||||||||    
T  31272911 aatgtgtcttc 31272921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 44473833 - 44473755
Alignment:
Q  34 ataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttcta 112  Q
    |||||||||||||||||||||||| ||||| |  |||  ||||||||||||||||||| ||||| |||| |||||||||    
T  44473833 ataaaaattagttggtgtcttttaacaaatactcatacaataacttgctaaaagacaccttcatgaaagatgtcttcta 44473755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 1983517 - 1983625
Alignment:
Q  3 ttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    ||||||||||| ||| |||||||| ||| ||||||||||||||||| | | ||||| |||||   ||||| |||| ||| |||||||||| |||||||||    
T  1983517 ttttagttatagctttgctaaaagacactttcataaaaattagttgatattttttaacaaatttttatagaataatttgttaaaagacaccttcataaaa 1983616  T
Q  102 ggtgtcttc 110  Q
     ||||||||    
T  1983617 tgtgtcttc 1983625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 847669 - 847578
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    |||||||||| |||||| |||||||| ||| | | ||||||||||||||||||||||| ||||||   |||| |||||||| ||||||||||    
T  847669 ctttttagttttaactttgctaaaagacacttccctaaaaattagttggtgtcttttaacaaatgttcatagaataacttgttaaaagacac 847578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 41829576 - 41829655
Alignment:
Q  20 taaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||| || ||||||||||||||||| |||||||||| ||||||   |||| ||||||||||||||||||  |||||||    
T  41829576 taaaagacatcttcataaaaattagtttgtgtcttttaacaaatgttcatagaataacttgctaaaagacatcttcataa 41829655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 10775994 - 10775933
Alignment:
Q  48 gtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtctt 109  Q
    ||||||||||  ||||| | |||||||||||||||||||| ||| |||||||||||||||||    
T  10775994 gtgtcttttaaaaaatgtcaataggataacttgctaaaaggcactttcataaaaggtgtctt 10775933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 14371614 - 14371655
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  14371614 ataacttgctaaaagacaccttcataaaaggtgtcttctagc 14371655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13468337 - 13468409
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||||||   |||||||  |||||| ||| ||||| || ||||||||||||||||||    
T  13468337 ctttttagttataacttgctaaagcacaccttctaaaaaataagtgggtgtattatagcaaatgcctatagga 13468409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 39589991 - 39590035
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaaccct 122  Q
    |||||||||||||| |||||||||||||||||||||| |||||||    
T  39589991 ttgctaaaagacaccttcataaaaggtgtcttctagcaaaaccct 39590035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 10616450 - 10616379
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  10616450 tttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 10616379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 38071180 - 38071134
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  38071180 ataacttgctaaaagacacattcataaaatgtgtcttttagcaaaac 38071134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 39934439 - 39934509
Alignment:
Q  3 ttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||| |||||  |||||||  |||||| ||||||||| || |||||||||||| |||||    
T  39934439 ttttagttataacttgttaaaacacaccttctaaaaaataagttggtgtattctagcaaatgcctgtagga 39934509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40301410 - 40301372
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaa 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  40301410 ctttttagttataacttgctaaaagacaccttcataaaa 40301372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 3210920 - 3210961
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  3210920 ttgctaaaagacaccttcataaaaggtgtcttctagcaaaac 3210961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 32069179 - 32069110
Alignment:
Q  4 tttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  32069179 tttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 32069110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38092221 - 38092156
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgc 65  Q
    ||||||||||||||||| | |||| | ||| ||||||||||||| ||||||||||||| |||||||    
T  38092221 ctttttagttataactttgttaaatgacacgttcataaaaattaattggtgtcttttaacaaatgc 38092156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3369871 - 3369800
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||  ||||||| ||| ||||| |  ||||||||||||||||||    
T  3369871 ctttttagttataacttgctaaaacacacctt-ttaaaaataagtgggtgtatcctagcaaatgcctatagga 3369800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13269270 - 13269342
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| || |||||||||  |||||||    
T  13269270 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtttatagga 13269342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 16645536 - 16645576
Alignment:
Q  81 ctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  16645536 ctaaaagacaccttcataaaaggtgtcttctagcaaaaccc 16645576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26042977 - 26043049
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||   |||||| ||| ||||| |  ||||||||||||||||||    
T  26042977 ctttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctatagga 26043049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27545920 - 27545848
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  |||||||||| |||||||    
T  27545920 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcttatagga 27545848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29125746 - 29125818
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  ||||||  || ||||| |  ||||||||||||||||||    
T  29125746 ctttttagttataacttgctaaaacacaccttccaaaaaataggtgggtgtatcctagcaaatgcctatagga 29125818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32486963 - 32487035
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| |  ||||||||||||||||||    
T  32486963 ctttttagttataacttgctaaaatacactttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 32487035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3154254 - 3154316
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  3154254 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 3154316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14819320 - 14819258
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  14819320 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 14819258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 36899897 - 36899827
Alignment:
Q  3 ttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  |||||||||| |||||||    
T  36899897 ttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcgtatagga 36899827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1281922 - 1281990
Alignment:
Q  3 ttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatag 71  Q
    ||||||||||||||||||||||  |||||||  |||||| ||| | ||| || || |||||||||||||    
T  1281922 ttttagttataacttgctaaaacacaccttctaaaaaataagtggatgtattctaccaaatgcctatag 1281990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26867959 - 26868031
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||| |||||||||||||||  |||||||   ||||| ||| ||||| || ||| ||||||||||||||    
T  26867959 ctttttagatataacttgctaaaacacaccttctagaaaataagtgggtgtgttatagtaaatgcctatagga 26868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35550628 - 35550700
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| |||  |||| |  ||||||||||||||||||    
T  35550628 ctttttagttataacttgctaaaacacacattctaaaaaataagtgagtgtatcctagcaaatgcctatagga 35550700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 45299625 - 45299693
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    |||||| |||||| |||||||||  |||||||| |||||| ||| ||||| |  |||||||||||||||    
T  45299625 tttttaattataatttgctaaaacacaccttcaaaaaaataagtgggtgtatcctagcaaatgcctata 45299693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 35173 - 35050
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||||||||||  |||| ||||||||||||||||||| |||||||    
T  35173 ctttttagttataactttgctaaaagacaccttcataaaaattagtcggtgtctcttagcaaatgctcatagaataacttgctaaaagacaccttcataa 35074  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    ||||||||||||||| ||||||||    
T  35073 aaggtgtcttctagcaaaaccctt 35050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 16273615 - 16273725
Alignment:
Q  11 ataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttc 110  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||    
T  16273615 ataacttgctaaaagacaccttcataaaaattagtttgtgtcttttagcaaatgtctataagataacttgctaaaagacaccttcataaagggtgtcttc 16273714  T
Q  111 tagctaaaccc 121  Q
    |||| ||||||    
T  16273715 tagcaaaaccc 16273725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 13960417 - 13960539
Alignment:
Q  1 ctttttagttataa-cttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  13960417 ctttttagtcataaacttgctaaaagacaccttcataaaaattagctg-tgtcttttagcaaaggcctataggataacttgctaaaagacaccttcataa 13960515  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    || |||||||||||| ||||||||    
T  13960516 aaagtgtcttctagcgaaaccctt 13960539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 28038243 - 28038364
Alignment:
Q  1 ctttttagttataacttg-ctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||||||||||  |||| ||||||||||||||||||| |||||||    
T  28038243 ctttttagttataactttactaaaagacaccttcataaaaattagttggtgtgttttagcaaatgctcatagaataacttgctaaaagacactttcataa 28038342  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    || |||||||||||| ||||||    
T  28038343 aatgtgtcttctagcaaaaccc 28038364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19323739 - 19323859
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||| |||||||  | |||||||||||||||||||||| |||||||    
T  19323739 ctttttagttataactttgctaaaagacactttcataaaaattaattggtgtcttttaacaaatgctaaaaggataacttgctaaaagacaccttcataa 19323838  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||||||||||||||| |||||    
T  19323839 aaggtgtcttctagcaaaacc 19323859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 31056412 - 31056532
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||| ||||||||||||||||| ||| || ||||||||||||||||||||||| | ||||||||||| | ||||||||||||| |||| ||||||||    
T  31056412 ctttttaattataacttgctaaaagacactttaataaaaattagttggtgtcttttcggaaatgcctataagttaacttgctaaaatacaccttcataaa 31056511  T
Q  101 aggtgtcttctagctaaaccc 121  Q
    |||||||||||||| ||||||    
T  31056512 aggtgtcttctagcaaaaccc 31056532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31042563 - 31042674
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||| |||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||    
T  31042563 cttttttgttataacttgctaaaagacactttaataaaaattagttggtgtcttttaacaaatgcctataagataacttgctaaaatacaccttcataaa 31042662  T
Q  101 aggtgtcttcta 112  Q
     |||||||||||    
T  31042663 gggtgtcttcta 31042674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27365834 - 27365716
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||| |||||||||||| |||||||  |||| ||||||||||||||||||| ||||||||    
T  27365834 ctttttagttataacttgctaaaagacacctttataaaacctaggtggtgtcttttaacaaatgctcatagaataacttgctaaaagacaccttcataaa 27365735  T
Q  101 aggtgtcttctagctaaac 119  Q
    |||||||||||||| ||||    
T  27365734 aggtgtcttctagcaaaac 27365716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 23204496 - 23204375
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| |||||||  |||| |||||||| |||||||||| |||||||    
T  23204496 ctttttagttataactttgctaaaagacaccttcataaaaattagttgatgtcttttaacaaatgctcatagaataacttgttaaaagacaccttcataa 23204397  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    ||| ||||||||||| ||||||    
T  23204396 aagatgtcttctagcaaaaccc 23204375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16994178 - 16994302
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||  |||| |||||||||||||  |||| |||||||    
T  16994178 ctttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaacaacaccttcataa 16994277  T
Q  100 aaggtgtcttctagctaaaccctta 124  Q
    || |||||||||||| |||||||||    
T  16994278 aatgtgtcttctagcaaaaccctta 16994302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9741845 - 9741722
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||||||||  |||| |||| ||| |||||||||| |||||||    
T  9741845 ctttttagttataactttgctaaaaaacaccttcataaaaattagttggtgttttttagcaaatgctcatagaataatttgttaaaagacaccttcataa 9741746  T
Q  100 aaggtgtcttctagctaaaccctt 123  Q
    || |||||||||||| ||||||||    
T  9741745 aatgtgtcttctagcaaaaccctt 9741722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 37172431 - 37172552
Alignment:
Q  1 ctttttagttataacttg-ctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||   ||| |||||||| |||||||||| |||||||    
T  37172431 ctttttagttataatttttctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcgtagaataacttgttaaaagacaccttcataa 37172530  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    |||||| |||||||| ||||||    
T  37172531 aaggtgacttctagccaaaccc 37172552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 38758660 - 38758779
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| |||||| |||||||| ||||||||||||||||||| |||  |||| ||||||||||||||||||| |||||||    
T  38758660 ctttttagttataactttgttaaaagacacctttataaaaatcagttggtgtcttttagcaa-tgctcatagaataacttgctaaaagacaccttcataa 38758758  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || |||||||||||| |||||    
T  38758759 aatgtgtcttctagcaaaacc 38758779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 21913836 - 21913907
Alignment:
Q  51 tcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccct 122  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  21913836 tcttttagcaaatgcctataggataacttgctaaaagacaccttcataaagggtgtcttctagcaaaaccct 21913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 17689378 - 17689499
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  |||| ||||| | ||||||||||  || ||||    
T  17689378 ctttttagttataactttgctaaaagacaccttcataaaaattagt-ggtgtcttttagcaaatgctcatagaataacctactaaaagacatctttataa 17689476  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    || |||||||||| | |||||||    
T  17689477 aatgtgtcttctaacaaaaccct 17689499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 20269333 - 20269239
Alignment:
Q  20 taaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||   |||| ||||||||||||||||||| |||||||||| |||||||||||    
T  20269333 taaaagacaccttcataaaaattaattgttgtcttttagcaaatgttcatagaataacttgctaaaagacaccttcataaaagctgtcttctagc 20269239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18015762 - 18015642
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||   ||   ||||||||||||||||||| ||||||     
T  18015762 ctttttagttataactttgctaaaaaacaccttcataaaaattagttggtgtcttttaacaaatgttcatgcaataacttgctaaaagacaccttcatat 18015663  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    |||||||| |||||| ||||||    
T  18015662 aaggtgtc-tctagcaaaaccc 18015642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19325076 - 19325166
Alignment:
Q  1 ctttttagttataac--ttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagac 89  Q
    ||||||||||||||   |||||||||| ||||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||||||    
T  19325076 ctttttagttataaactttgctaaaagacaccttcataaaaattagttggtttcttttagcaaatgctcatagaataacttgctaaaagac 19325166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28813097 - 28813218
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcata- 98  Q
    ||||||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||   |||| ||| |||||||||| |||  ||||||     
T  28813097 ctttttagttataactttgctaaaagacgcctttataaaaattagttggtgtcttttagcaaatgatcatagaatatcttgctaaaaaacatcttcatac 28813196  T
Q  99 aaaggtgtcttctagctaaacc 120  Q
    ||| ||||||| |||| |||||    
T  28813197 aaatgtgtcttttagcaaaacc 28813218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15978922 - 15978814
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || | |||||| ||| || |||||||||||||||||||||||||||||| |  ||||  ||| |||||||||||||| |||||||    
T  15978922 ctttttagttataattttgttaaaagacacttttataaaaattagttggtgtcttttagcaaatactcatagattaatttgctaaaagacaccttcataa 15978823  T
Q  100 aaggtgtct 108  Q
    || ||||||    
T  15978822 aatgtgtct 15978814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 26730345 - 26730408
Alignment:
Q  3 ttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgc 65  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  26730345 ttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgc 26730408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 33429221 - 33429303
Alignment:
Q  40 attagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccct 122  Q
    |||| ||||||||||| |||||||||  |||| ||||||||||||||| ||| ||||||||| |||||||||||| |||||||    
T  33429221 attaattggtgtctttcagcaaatgctcatagaataacttgctaaaaggcaccttcataaaatgtgtcttctagcaaaaccct 33429303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5497783 - 5497840
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttag 58  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  5497783 ctttttagttataacttgctgaaagacactttcataaaaattagttggtgtcttttag 5497840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38293517 - 38293616
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtctttt-agcaaatgcctataggataacttgctaaaagacacattcata 98  Q
    ||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||| |  ||||||  |||| |||||||| |||||||||| ||||||    
T  38293517 ctttttagttataactttgttaaaagacacgttcataaaaattagttggtgtcttttaataaaatgctcatagaataacttgttaaaagacaccttcata 38293616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17421716 - 17421788
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| || ||||||||| ||||||||    
T  17421716 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtctatagga 17421788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25912202 - 25912130
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  25912202 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 25912130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31752138 - 31752210
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| | | ||||| || ||||||||||||||||||    
T  31752138 ctttttagttataacttgctaaaacacaccttctaaaaaataaatgggtgtattctagcaaatgcctatagga 31752210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 15388222 - 15388269
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  15388222 ataacttgctaaaagacacatttataaaaggtgtgttctagcaaaacc 15388269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19995395 - 19995319
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataactt 79  Q
    ||||||||||||||||| |||||||| |||||||||||   ||||||||||| ||||| |||||||  |||| |||||||    
T  19995395 ctttttagttataactttgctaaaagacaccttcataa---ttagttggtgttttttaacaaatgctcatagaataactt 19995319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31240404 - 31240335
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  |||||||||||||||    
T  31240404 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctata 31240335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37249476 - 37249545
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||| ||||||    
T  37249476 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctata 37249545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4083760 - 4083832
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||| |||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  4083760 ctttttagttataacttgttaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 4083832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7944310 - 7944382
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| |  ||||||||||||||||||    
T  7944310 ctttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctatagga 7944382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14369789 - 14369861
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||   |||||| ||| ||||| |  ||||||||||||||||||    
T  14369789 ctttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctatagga 14369861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 17233074 - 17233004
Alignment:
Q  3 ttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||| |||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  17233074 ttttagttataatttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 17233004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39549000 - 39548930
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatag 71  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||| ||||||    
T  39549000 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatggctatag 39548930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22701903 - 22701835
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| || |||||||||| ||||    
T  22701903 ctttttagttataacttgctaaaacacaccttc-caaaaataagtgggtgtattctagcaaatgcttata 22701835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29302117 - 29302056
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaa 62  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||    
T  29302117 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 29302056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30687927 - 30687866
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaa 62  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||    
T  30687927 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 30687866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37468707 - 37468776
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  |||||||| |||| ||||| |||||||| || ||||||    
T  37468707 ctttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttttagcatatccctata 37468776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3038909 - 3038981
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| |  || |||||||||||||||    
T  3038909 ctttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtatcctaacaaatgcctatagga 3038981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6436445 - 6436517
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||| |||||||||||||  |||||||  |||||| ||| ||||  |  ||||||||||||||||||    
T  6436445 ctttttagttgtaacttgctaaaacacaccttctaaaaaataagtaggtgaatcctagcaaatgcctatagga 6436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10951077 - 10951149
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||| |||||||||||||||  ||||||   |||||| ||| ||||| || || |||||||||||||||    
T  10951077 ctttttagatataacttgctaaaacacaccttataaaaaataagtaggtgtattatatcaaatgcctatagga 10951149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12910182 - 12910110
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||| ||||||||   || |||  |||||| ||| ||||| || ||||||||||||||||||    
T  12910182 ctttttagttataacatgctaaaacatacattctaaaaaataagtgggtgtattctagcaaatgcctatagga 12910110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 19994617 - 19994565
Alignment:
Q  68 ataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    |||| ||||||||||||||||||  ||| ||||| |||||||||||| |||||    
T  19994617 atagaataacttgctaaaagacatgttcttaaaatgtgtcttctagcaaaacc 19994565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 23129639 - 23129675
Alignment:
Q  3 ttttagttataacttgctaaaaggcaccttcataaaa 39  Q
    |||||||||||||||| |||||| |||||||||||||    
T  23129639 ttttagttataacttgttaaaagacaccttcataaaa 23129675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 28747785 - 28747856
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaatt-agttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||||||  ||| ||| |||||||| ||| ||||| || ||||||||| ||||||||    
T  28747785 tttttagttataacttgctaaaacacacattc-taaaaattaagtgggtgtattctagcaaatgtctatagga 28747856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 33429254 - 33429282
Alignment:
Q  11 ataacttgctaaaaggcaccttcataaaa 39  Q
    |||||||||||||||||||||||||||||    
T  33429254 ataacttgctaaaaggcaccttcataaaa 33429282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33696075 - 33696147
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||| ||||||||   | ||||  |||||| ||| ||||| || ||||||||||||||||||    
T  33696075 ctttttagttataacatgctaaaacataacttctaaaaaataagtgggtgtattctagcaaatgcctatagga 33696147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35425251 - 35425310
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaa 61  Q
    |||||| ||||||| ||| |||||| |||| |||||||||| ||| |||||||||||||||    
T  35425251 ctttttcgttataatttgttaaaagacaccgtcataaaaatcagt-ggtgtcttttagcaa 35425310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 9548244 - 9548365
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  9548244 ctttttagttataacttcgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataa 9548343  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    ||| |||||| |||| ||||||    
T  9548344 aagatgtcttatagcaaaaccc 9548365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29471668 - 29471788
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||   |||| ||||||||||||||||||| |||||||    
T  29471668 ctttttagttataactttgctaaaagacaccttcataaaaattagtttgtgtcttttagcaaatgttcatagaataacttgctaaaagacaccttcataa 29471767  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    ||||||||||||||| |||||    
T  29471768 aaggtgtcttctagcaaaacc 29471788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12725751 - 12725870
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||||||  || ||||    
T  12725751 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttagtaaatgctcatagaataacttgctaaaagacatctttataa 12725850  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||||||||||||||| ||||    
T  12725851 aaggtgtcttctagcaaaac 12725870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18924573 - 18924692
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||   |||| ||||||||||||||||||| |||||||    
T  18924573 ctttttagttataactttgctaaaggacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaagacaccttcataa 18924672  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||||||||||||||| ||||    
T  18924673 aaggtgtcttctagcaaaac 18924692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10664725 - 10664839
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  10664725 ctttttagttataactttgctaaaagacgccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataa 10664824  T
Q  100 aaggtgtcttctagc 114  Q
    || ||||||| ||||    
T  10664825 aatgtgtcttatagc 10664839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1749952 - 1750072
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||  |||| ||||| ||||||||||||| |||||||    
T  1749952 ctttttagttataattttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatagaataacctgctaaaagacaccttcataa 1750051  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || |||||||||||| |||||    
T  1750052 aatgtgtcttctagcaaaacc 1750072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4206551 - 4206430
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctat---aggataacttgctaaaagacacattcat 97  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||| | ||   |||||||||||||||||||||| |||||    
T  4206551 ctttttagttataacttgctaaaagacacattcataaaaattagttggtttctgttagcaaatgtcaataggaggataacttgctaaaagacaccttcat 4206452  T
Q  98 aaaaggtgtcttctagctaaac 119  Q
    |||| |||||||||||| ||||    
T  4206451 aaaatgtgtcttctagcaaaac 4206430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 39089138 - 39089249
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| |||||||| || |||||||||||||||||||||||||||| ||||||   |||| |||||||| |||||||||||||||||||    
T  39089138 tttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgttaatagaataacttgttaaaagacacattcataaa 39089237  T
Q  101 aggtgtcttcta 112  Q
    ||||||||||||    
T  39089238 aggtgtcttcta 39089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 42090533 - 42090415
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||   |||| |||| |||||||||||||| ||||||||    
T  42090533 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataatttgctaaaagacactttcataaa 42090434  T
Q  101 aggtgtcttctagctaaac 119  Q
    |||||||||| ||| ||||    
T  42090433 aggtgtcttccagcaaaac 42090415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33740354 - 33740241
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||| |||||||||||| |||||||| ||| || ||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||| |||||||    
T  33740354 ctttctagttataactttgctaaaagacacatttataaaaattagttggtgtcttttaagaaatgtcaataggataacttgctaaaagacaccttcataa 33740255  T
Q  100 aaggtgtcttctag 113  Q
    ||||||||||||||    
T  33740254 aaggtgtcttctag 33740241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 39434973 - 39435084
Alignment:
Q  8 gttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtc 107  Q
    |||||||||| ||||||| || ||||||||||||||||| |||| ||||| |||||| |||||||| |||||| |||||||||| |||||||||||||||    
T  39434973 gttataacttactaaaagacatcttcataaaaattagttagtgtattttaacaaatgtctataggaaaacttgttaaaagacactttcataaaaggtgtc 39435072  T
Q  108 ttctagctaaac 119  Q
    ||||||| ||||    
T  39435073 ttctagcaaaac 39435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 24314332 - 24314213
Alignment:
Q  3 ttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||  |||  |||| |||||||||||||| || ||||||    
T  24314332 ttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctcataaaataatttgctaaaagacacctttataaaa 24314233  T
Q  102 ggtgtcttctagctaaaccc 121  Q
    ||||| || |||| ||||||    
T  24314232 ggtgtattttagcaaaaccc 24314213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21950759 - 21950650
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||| |||||||| |||||||||||| ||||| |||||||  |||| ||||||||||||||||||| |||||||    
T  21950759 ctttttagttataactttgctaaaagacacattcataaatattagttggtgttttttaacaaatgctcatagaataacttgctaaaagacaccttcataa 21950660  T
Q  100 aaggtgtctt 109  Q
    ||| ||||||    
T  21950659 aagatgtctt 21950650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 44539878 - 44540011
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctat-aggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||| |||||||| || || ||||||||||||| ||||| |||||||    
T  44539878 tttttagttataactttgctaaaatacaccttcataaaaattagttggtatcttttaacaaatgccaataagaataacttgctaaatgacaccttcataa 44539977  T
Q  100 aaggtgtcttctagctaaacccttaattatatac 133  Q
    ||| ||||||||| | ||| |||||  |||||||    
T  44539978 aagatgtcttctaacaaaaaccttatatatatac 44540011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 16719762 - 16719882
Alignment:
Q  2 tttttagttataacttg-ctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||| |||||||  ||||||| |||||||||||||||||||| |||||||||| |||||    || | |||||| |||||||||||| ||||||||    
T  16719762 tttttagtgataactttactaaaagacaccttcataaaaattagtttgtgtcttttaacaaatattcatggaataactagctaaaagacaccttcataaa 16719861  T
Q  101 aggtgtcttctagctaaaccc 121  Q
    |||||||||||||| ||||||    
T  16719862 aggtgtcttctagcaaaaccc 16719882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34125583 - 34125701
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||  |||||||||| ||| ||||||||||||| |||||||  |||| |||||||||||| ||||||||||||||||||||   ||||||    
T  34125583 ctttttagttataggttgctaaaagacacattcataaaaattacttggtgtaatttaacaaatgcctatatgataacttgctaaaagacac---cataaa 34125679  T
Q  101 aggtgtcttctagctaaaccct 122  Q
     |||| |||||| | |||||||    
T  34125680 gggtgacttctaacaaaaccct 34125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 2969684 - 2969794
Alignment:
Q  3 ttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||| | |||| |||| ||  ||||||||||||  ||| ||    
T  2969684 ttttagttataactttgctaaaagacaccttcataaaaattagttggtatcttttaacaaatgtcaatagaataattttttaaaagacacatgtatagaa 2969783  T
Q  102 ggtgtcttcta 112  Q
    |||||||||||    
T  2969784 ggtgtcttcta 2969794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25880698 - 25880575
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat----gcctataggataacttgctaaaagacacattca 96  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||| |  ||||||||||||    |  |||| ||||||||||||||| |||| ||||    
T  25880698 ctttttagttataacttgttaaaaaacaccttcataaaaattagttgatagcttttagcaaataaatgtttatatgataacttgctaaaaaacaccttca 25880599  T
Q  97 taaaaggtgtcttctagctaaacc 120  Q
    ||||| |||||||||||| |||||    
T  25880598 taaaaagtgtcttctagcaaaacc 25880575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39961573 - 39961691
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||| ||| |||||| ||||||| | |||||||||| || ||||||| |||||| ||||  ||||||||| |||||||||| ||||||||    
T  39961573 ctttttagttataatttgataaaagacaccttcgtgaaaattagtttgtatcttttaacaaatgtctatgagataacttgttaaaagacaccttcataaa 39961672  T
Q  101 aggtgtcttctagctaaac 119  Q
    | || ||||||||| ||||    
T  39961673 atgtatcttctagcaaaac 39961691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12895448 - 12895383
Alignment:
Q  1 ctttttagttataac-ttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgc 65  Q
    ||||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  12895448 ctttttagttatagcattgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgc 12895383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 768581 - 768653
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||| ||||| ||||||||  |||||| ||||||||| |  ||||||||||||||||||    
T  768581 ctttttagttataacttgttaaaacgcaccttctaaaaaataagttggtgtatcgtagcaaatgcctatagga 768653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 25810479 - 25810559
Alignment:
Q  40 attagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    |||||||||||||||||| ||||||   |||  |||||||||||||| |||| |||||||||||| ||||||||| |||||    
T  25810479 attagttggtgtcttttaacaaatgataatataataacttgctaaaaaacaccttcataaaaggtatcttctagcaaaacc 25810559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 22142346 - 22142388
Alignment:
Q  144 gaaactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  22142346 gaaactagatcgcctacccgtgctgtcgcacgggtcatttata 22142388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 121
Target Start/End: Complemental strand, 10862618 - 10862575
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    |||||||||||||| |||||||||||||||||||||| ||||||    
T  10862618 ttgctaaaagacaccttcataaaaggtgtcttctagcaaaaccc 10862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27175507 - 27175545
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaa 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  27175507 ctttttagttataacttgctaaaagacaccttcataaaa 27175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 33471477 - 33471431
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  33471477 ataacttgctaaaagacacattcataaaagacgtcttctagcaaaac 33471431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11675310 - 11675237
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttc-ataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||| | |||||| ||| ||||| |  ||||||||||||||||||    
T  11675310 ctttttagttataacttgctaaaacacaccttctaaaaaaataagtgggtgtatcctagcaaatgcctatagga 11675237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 27175517 - 27175558
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  27175517 ataacttgctaaaagacaccttcataaaatgtgtcttctagc 27175558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37169713 - 37169644
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    |||||||||||||||||||||||| |||||||   |||||| ||  ||||| || |||||||||||||||    
T  37169713 ctttttagttataacttgctaaaacgcaccttttaaaaaataagagggtgtattctagcaaatgcctata 37169644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 2969673 - 2969625
Alignment:
Q  7 agttataactt-gctaaaaggcaccttcataaaaattagttggtgtctt 54  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  2969673 agttataactttgctaaaagacaccttcataaaaattagtgggtgtctt 2969625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 7826047 - 7826087
Alignment:
Q  146 aactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  7826047 aactagatcccccacccgtgctgtcgcacgggtcatttata 7826087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13002059 - 13002131
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||| |||||||||||  | |||||  |||||| ||  ||||| |||||||||||||||||||||    
T  13002059 ctttttagttatcacttgctaaaacactccttctaaaaaataagagggtgtattttagcaaatgcctatagga 13002131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34082724 - 34082652
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| | | ||||| |  ||||||||||||||||||    
T  34082724 ctttttagttataacttgctaaaacacaccttctaaaaaataaatgggtgtatcctagcaaatgcctatagga 34082652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 28293459 - 28293502
Alignment:
Q  147 actagatctcctacccgtgctgtcgcacgggtcatttataatgt 190  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||    
T  28293459 actagatctcccacccgtgctgccgcacgggtcatatataatgt 28293502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 36779856 - 36779891
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctag 113  Q
    |||||||||||||| |||||||||||||||||||||    
T  36779856 ttgctaaaagacaccttcataaaaggtgtcttctag 36779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5601748 - 5601710
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaa 39  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  5601748 ctttttagttataatttgctaaaagacaccttcataaaa 5601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 33739702 - 33739632
Alignment:
Q  3 ttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||| ||||||||||||||||  |||||||  |||||| ||| | ||| || ||||||||||||||||||    
T  33739702 ttttaattataacttgctaaaacacaccttctaaaaaataagtggatgtattctagcaaatgcctatagga 33739632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 6231262 - 6231221
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    |||||||||||||| |||||||| ||||||||||||| ||||    
T  6231262 ttgctaaaagacaccttcataaatggtgtcttctagcaaaac 6231221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23175416 - 23175347
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  |||||||| |||| ||||| || |||||||| ||||||    
T  23175416 ctttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctata 23175347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23586673 - 23586604
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  |||||||| |||| ||||| || |||||||| ||||||    
T  23586673 ctttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaatccctata 23586604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23664906 - 23664834
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||| ||| |||||  |||||||  ||| || ||| ||||| || ||||||||||||||||||    
T  23664906 ctttttagttataatttgttaaaacacaccttctaaaatataagtgggtgtattctagcaaatgcctatagga 23664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 34450357 - 34450321
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  34450357 ttgctaaaagacaccttcataaaatgtgtcttctagc 34450321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 43780706 - 43780666
Alignment:
Q  146 aactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    |||||||||||||||||||||| |||||||| |||| ||||    
T  43780706 aactagatctcctacccgtgctatcgcacggatcatatata 43780666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 30414140 - 30414267
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||  |||  |||||||||||||| |||| ||||||||    
T  30414140 tttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatataataacttgctaaaaaacaccttcataaa 30414239  T
Q  101 aggtgtcttctagctaaacccttaatta 128  Q
    |||||| ||||||| |||||||||||||    
T  30414240 aggtgtattctagcaaaacccttaatta 30414267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 30819571 - 30819678
Alignment:
Q  21 aaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||| |    
T  30819571 aaaagacaccttcataaaaattagttggtgtcttttagcaaatgcctataggataatttgctaaaaaacaccttcataaaaggtgtcttctagcaaaatc 30819670  T
Q  121 cttaatta 128  Q
    || |||||    
T  30819671 ctaaatta 30819678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1838697 - 1838810
Alignment:
Q  1 ctttttagttataactt--gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcata 98  Q
    |||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||| ||||||||||| ||||||    
T  1838697 ctttttagttataacttttgctaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttactaaaagacactttcata 1838796  T
Q  99 aaaggtgtcttcta 112  Q
    ||| ||||||||||    
T  1838797 aaatgtgtcttcta 1838810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 17168273 - 17168161
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaa 101  Q
    |||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||| ||||| |||||||| |||||||||| |||||||      
T  17168273 tttttagttataacttgctaaaagacaccttcataaaaattaactagtgtcttttagcaaatgcatatagaataacttgttaaaagacaccttcataatt 17168174  T
Q  102 ggtgtcttctagc 114  Q
    |||||||||||||    
T  17168173 ggtgtcttctagc 17168161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25671014 - 25671133
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  25671014 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacaccttcataa 25671113  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||  |||||| |||| ||||    
T  25671114 aatatgtcttttagcaaaac 25671133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7336095 - 7336217
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||  ||| |||||||||||||| || ||||    
T  7336095 ctttttagttataactttgctaaaagacaccttcataaaaattaattggtgtcttttaacaaatgcttatagagtaatttgctaaaagacaccttaataa 7336194  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    || |||||||||||| |||||||    
T  7336195 aatgtgtcttctagcaaaaccct 7336217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 14463438 - 14463316
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    |||||| ||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||||| |||| ||||||||    
T  14463438 tttttacttataactttgttaaaagacaccttcataaaaattagttagtgtcttttagcaaatgctcatagaataacttgctaaaaaacaccttcataaa 14463339  T
Q  101 aggtgtcttctagctaaaccctt 123  Q
    |||||||||||||| ||| ||||    
T  14463338 aggtgtcttctagcaaaatcctt 14463316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2964899 - 2965019
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||||   |||| ||||||||||| ||||||| |||||||    
T  2964899 ctttttagttataattttgcttaaagacaccttcataaaaattagttggtgtcttttagcaaatgttcatagaataacttgctagaagacaccttcataa 2964998  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    | ||||||||||||| |||||    
T  2964999 acggtgtcttctagcaaaacc 2965019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25825335 - 25825447
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||| |||||||  |||  ||||||||||||||||||| |||||||    
T  25825335 ctttttagttataactttgctgaaaggcacctccataaaaattagtttgtgtcttttaacaaatgctcataaaataacttgctaaaagacaccttcataa 25825434  T
Q  100 aaggtgtcttcta 112  Q
    |||||||||||||    
T  25825435 aaggtgtcttcta 25825447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1406829 - 1406707
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||| ||||||   |||| |||| |||||||||||||| |||||||    
T  1406829 ctttttagttataactttgctaaaagacaccttcacaaaaattagtcggtgtcttttaccaaatgttcatagaataatttgctaaaagacaccttcataa 1406730  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    || |||||||||||| |||||||    
T  1406729 aatgtgtcttctagcaaaaccct 1406707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 47921680 - 47921566
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||| |||||| | ||||||||||||| ||||| |||| |||||||    
T  47921680 ctttttagttataactttgctaaaagacaccttcataaaaattaattggtatcttttaacaaatgtcaataggataacttgttaaaaaacaccttcataa 47921581  T
Q  100 aaggtgtcttctagc 114  Q
    |||| ||||||||||    
T  47921580 aaggcgtcttctagc 47921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10769806 - 10769918
Alignment:
Q  1 ctttttagttataacttgc-taaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| | | | ||||||||    
T  10769806 ctttttagttataacttggataaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcttatagaataacttgttaata-aaatattcataa 10769904  T
Q  100 aaggtgtcttctag 113  Q
    || |||||||||||    
T  10769905 aatgtgtcttctag 10769918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1627712 - 1627830
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||   |||| ||||||||||||||||||  || ||||    
T  1627712 ctttttagttataactttgctaaaagacaccttcataaaagttagttg-tgtcttttagcaaatgttcatagaataacttgctaaaagacatctttataa 1627810  T
Q  100 aaggtgtcttctagctaaac 119  Q
    ||||||||||||||| ||||    
T  1627811 aaggtgtcttctagcaaaac 1627830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 17452949 - 17453043
Alignment:
Q  16 ttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttc 110  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||| ||||||||| ||||||||    
T  17452949 ttgctaaaagacaccttcacaaaaattagttggtgtcttttagcaaatgctcatagaatagcttgctaaaagacaccttcataaaaagtgtcttc 17453043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24992902 - 24993008
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| |||||||  |||  |||| |||||||||||||| |||||||    
T  24992902 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgctaatataataatttgctaaaagacaccttcataa 24993001  T
Q  100 aaggtgt 106  Q
    |||||||    
T  24993002 aaggtgt 24993008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 44720184 - 44720064
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||| ||||||||||||||| ||||||||| ||| |||  |||| ||||||||||||||||||| |||||||    
T  44720184 ctttttagttataactttgttaaaagacacct-cataaaaattagttgatgtcttttaccaattgctaatagaataacttgctaaaagacaccttcataa 44720086  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    ||||||||||||| | ||||||    
T  44720085 aaggtgtcttctaacaaaaccc 44720064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43939489 - 43939590
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || | |||||| ||||||||||||||||| ||||||||||||| |||||||  |||| ||||||||||||||||||| |||||||    
T  43939489 ctttttagttataattttgttaaaagacaccttcataaaaattaattggtgtcttttaacaaatgctcatagaataacttgctaaaagacaccttcataa 43939588  T
Q  100 aa 101  Q
    ||    
T  43939589 aa 43939590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 15661119 - 15661207
Alignment:
Q  4 tttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||  |||||||||||||| ||||    
T  15661119 tttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaatgcttataaaataacttgctaaaaaacac 15661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 40461101 - 40460989
Alignment:
Q  1 ctttttagttataacttg-ctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||||||  |||||||  || ||||||||||||| ||||||||||||| ||||||   |||  ||||||||||||||||||| |||||||    
T  40461101 ctttttagttataactttactaaaagatactttcataaaaattacttggtgtcttttaacaaatgttcatataataacttgctaaaagacaccttcataa 40461002  T
Q  100 aaggtgtcttcta 112  Q
    || ||||||||||    
T  40461001 aaagtgtcttcta 40460989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 10835664 - 10835582
Alignment:
Q  4 tttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaa 86  Q
    ||||||||||| |||||| ||  ||| |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  10835664 tttagttataatttgctagaacacactttcataaaaattagttggtgtcttttagcaaatgtcaataggataatttgctaaaa 10835582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 42470856 - 42470767
Alignment:
Q  20 taaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtctt 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||  |||  ||||||||| |||||||    
T  42470856 taaaagacaccttcataaaaattagttggtgtcttttagcaaatgctcatagaataacttgttaaagcacatcttcataaaatgtgtctt 42470767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9005546 - 9005434
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcac--cttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcat 97  Q
    |||||||||||||| || |||||||| |||  ||||||| ||||||||    |||||||| |||||||  |||| ||||||||||||||||||| |||||    
T  9005546 ctttttagttataattttgctaaaagacacaccttcatagaaattagt----gtcttttaacaaatgctgatagaataacttgctaaaagacaccttcat 9005451  T
Q  98 aaaaggtgtcttctagc 114  Q
    |||||||||||||||||    
T  9005450 aaaaggtgtcttctagc 9005434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26213736 - 26213855
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||| ||||||||| | |||||| ||| || ||||| |||||||| ||| ||||| |||||||  |||| ||||||||||||||||||| ||| |||    
T  26213736 ctttttaattataactttgttaaaagacacatttataaatattagttgatgttttttaacaaatgctcatagaataacttgctaaaagacaccttcgtaa 26213835  T
Q  100 aaggtgtcttctagctaaac 119  Q
    || |||||||||||| ||||    
T  26213836 aatgtgtcttctagcaaaac 26213855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 41146624 - 41146548
Alignment:
Q  38 aaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    |||||||||||||| |||||||||||||  |||| |||||||| ||||| |||| ||||||||| ||||||||||||    
T  41146624 aaattagttggtgttttttagcaaatgctcatagaataacttggtaaaaaacactttcataaaaagtgtcttctagc 41146548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 5226892 - 5226805
Alignment:
Q  27 caccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    ||||||||||||||||||||||||| ||||| ||||| |  |||  |||||||| |||||||||| ||||||||| ||||||| ||||    
T  5226892 caccttcataaaaattagttggtgttttttaacaaatactcatataataacttgttaaaagacaccttcataaaatgtgtcttttagc 5226805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8549599 - 8549678
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataactt 79  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||| |||||||||| |||||||  |||| |||||||    
T  8549599 ctttttagttataactttgctaaaaaacaccttcataaaaattagttagtgtcttttaacaaatgctaatagaataactt 8549678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 9679786 - 9679715
Alignment:
Q  50 gtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||| ||| | ||||||||||| ||||||    
T  9679786 gtcttttagcaaatgcatatatgataacttgctaaaagacaccttcaaaaaggatgtcttctagcaaaaccc 9679715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26897373 - 26897311
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaa 62  Q
    ||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||||    
T  26897373 ctttttagttataactttgctaaaaaacatcttcataaaaattagttggtgtcttttagcaaa 26897311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 38509712 - 38509778
Alignment:
Q  55 ttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||| | ||||||    
T  38509712 ttagcaaatgcttataggataatttgctaaaagacaccttcataaaatgtgtcttctaacaaaaccc 38509778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 463471 - 463399
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  463471 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 463399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16005601 - 16005673
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  16005601 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 16005673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26843156 - 26843084
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  26843156 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 26843084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13157718 - 13157635
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaa 84  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||| ||||||||| | |||||||    
T  13157718 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgtctataggatcagttgctaa 13157635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24770788 - 24770717
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagg 72  Q
    ||||||||||||||||||||||||  |||||||| || ||| ||| ||||| |  |||||||||||||||||    
T  24770788 ctttttagttataacttgctaaaacacaccttcaaaagaataagtgggtgtatcctagcaaatgcctatagg 24770717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 36630440 - 36630385
Alignment:
Q  36 aaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||  ||||||||||    
T  36630440 aaaaattagttggtgtcttttagtaaatgtcaataggataactttttaaaagacac 36630385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13264568 - 13264637
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  |||||||||||||||    
T  13264568 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctata 13264637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20411207 - 20411138
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||| ||||||    
T  20411207 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctata 20411138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 28454745 - 28454814
Alignment:
Q  4 tttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  28454745 tttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 28454814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 1469751 - 1469791
Alignment:
Q  81 ctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  1469751 ctaaaagacaccttcataaaaggtgtcttctagcaaaaccc 1469791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 27840306 - 27840346
Alignment:
Q  146 aactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  27840306 aactagatcgtctacccgtgctgtcgcacgggtcatttata 27840346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34515289 - 34515217
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||   |||||| ||| ||||| || || |||||||||||||||    
T  34515289 ctttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtattctaacaaatgcctatagga 34515217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36389617 - 36389545
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||||||   |||||| ||| ||||| |  ||||||||||||||||||    
T  36389617 ctttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaatgcctatagga 36389545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50559408 - 50559336
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||| |||||| ||| || || |  || |||||||||||||||    
T  50559408 ctttttagttataacttgctaaaacacaccttcaaaaaaataagtgggcgtatcctaacaaatgcctatagga 50559336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 51431884 - 51431955
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||| |||||||||  |||||||  |||||| ||| ||||| || ||||||||| ||||||||    
T  51431884 tttttagttataatttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgtctatagga 51431955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27255662 - 27255600
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  27255662 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 27255600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39424427 - 39424353
Alignment:
Q  1 ctttttagttata-acttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggat 74  Q
    ||||||||||||  |||||||||||  | |||||  |||||| ||||||||| || |||||||||||||||||||    
T  39424427 ctttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggat 39424353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 49659943 - 49659889
Alignment:
Q  68 ataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccct 122  Q
    |||| |||||||||||||| |||| ||||| |||||||||||||| | |||||||    
T  49659943 atagaataacttgctaaaaaacaccttcatgaaaggtgtcttctaacaaaaccct 49659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27787959 - 27787890
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  |||||||| ||||||    
T  27787959 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaattcctata 27787890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 158573 - 158501
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||   ||||| ||| ||||  || |||||||| |||||||||    
T  158573 ctttttagttataacttgctaaaacacaccttctagaaaataagtgggtgaattatagcaaattcctatagga 158501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3979536 - 3979464
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||| ||||   |||||||  |||||| ||| ||||| || ||||||||| ||||||||    
T  3979536 ctttttagttataacttgttaaagcacaccttctaaaaaataagtgggtgtattatagcaaatgtctatagga 3979464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5491760 - 5491688
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| |||  |||| || ||| ||||| ||||||||    
T  5491760 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgagtgtattctagtaaatgtctatagga 5491688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6192584 - 6192512
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||| |||  |||||||  ||| || ||| ||||| || |||||||||| |||||||    
T  6192584 ctttttagttataacttgctgaaacacaccttctaaaatataagtgggtgtattctagcaaatgcatatagga 6192512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8643033 - 8643105
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||| |||||||||||||||||  || ||||  |||||| ||| ||||| || |||||||||| |||||||    
T  8643033 ctttttggttataacttgctaaaacacatcttctaaaaaataagtgggtgtattatagcaaatgcgtatagga 8643105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 30289030 - 30289110
Alignment:
Q  29 ccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtctt 109  Q
    |||||||||||| ||||||||| |||||| |||||    |||  |||||||| |||||||| | ||||||||| |||||||    
T  30289030 ccttcataaaaaatagttggtgccttttaacaaatattcataaaataacttgttaaaagacgccttcataaaacgtgtctt 30289110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41146287 - 41146327
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaat 41  Q
    ||||||||||||||||||||||||  |||||||| ||||||    
T  41146287 ctttttagttataacttgctaaaacacaccttcaaaaaaat 41146327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49660407 - 49660363
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattag 44  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||    
T  49660407 ctttttagttataactttgttaaaagacaccttcataaaaattag 49660363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 392525 - 392403
Alignment:
Q  1 ctttttagttata-acttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||| | |||||||||| ||||||||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||  |||||||    
T  392525 ctttttagttatacatttgctaaaagacaccttcataataattagttggtgtcttttagcaaatgctcatagaataacttgctaaaagacatcttcataa 392426  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    ||||||||||||||| |||||||    
T  392425 aaggtgtcttctagcaaaaccct 392403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 103284 - 103397
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaa 100  Q
    ||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||||||||||| ||||| |||||||| |||||| |||| ||||||||    
T  103284 ctttttagttataacttcctaaaaaacaccttcataaaagttagttggtgtcttttagcaaatgtctataagataacttactaaaaaacaccttcataaa 103383  T
Q  101 aggtgtcttctagc 114  Q
     |||||||||||||    
T  103384 gggtgtcttctagc 103397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 88208 - 88245
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaa 38  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  88208 ctttttagttataacttcctaaaagacaccttcataaa 88245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 88218 - 88266
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctagctaaaccc 121  Q
    ||||||| ||||||||||| |||||||| ||| ||||||||| ||||||    
T  88218 ataacttcctaaaagacaccttcataaagggtatcttctagcaaaaccc 88266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9891492 - 9891370
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || |||||||| ||| ||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||| || ||||    
T  9891492 ctttttagttataaatttgctaaaagacacattcataaaaattagttggtgtcttttaacaaatgacaataggataatttgctaaaagacacctttataa 9891393  T
Q  100 aaggtgtcttctagctaaaccct 122  Q
    ||||| ||||||||| |||||||    
T  9891392 aaggtatcttctagcaaaaccct 9891370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12159485 - 12159595
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || |||||||  |||  ||||||||||||||||||| |||||||    
T  12159485 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttctaacaaatgctaatataataacttgctaaaagacaccttcataa 12159584  T
Q  100 aaggtgtcttc 110  Q
    |||||||||||    
T  12159585 aaggtgtcttc 12159595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17347083 - 17347197
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||  |||  ||||||||||||||||||| |||||||    
T  17347083 ctttttagttataactttgctaaaagacatcttcataaaaattagttggtgtcttttaacaaatgctaatataataacttgctaaaagacaccttcataa 17347182  T
Q  100 aaggtgtcttctagc 114  Q
    || ||||||||||||    
T  17347183 aatgtgtcttctagc 17347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15081240 - 15081138
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||| |||||||  |||| ||||||||||||||||||| |||||||    
T  15081240 ctttttagttataactttgctaaaagacaccttcataacaattaattggtgtcttttaacaaatgctcatagaataacttgctaaaagacaccttcataa 15081141  T
Q  100 aag 102  Q
    |||    
T  15081140 aag 15081138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 18096422 - 18096330
Alignment:
Q  28 accttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    |||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||| |||| ||||| ||||||||||| |||||    
T  18096422 accttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaaagacaccttcacaaaagatgtcttctagcaaaacc 18096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10075112 - 10074998
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||| ||||||||| | |||||| ||||||||||||||||||||||||||||||| |||||    |||  |||||||| |||||||||| |||||||    
T  10075112 ctttttaattataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatattcataaaataacttgttaaaagacactttcataa 10075013  T
Q  100 aaggtgtcttctagc 114  Q
    |||||||||||||||    
T  10075012 aaggtgtcttctagc 10074998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6322609 - 6322488
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| || |||| ||||| |||||||  |||| |||||||| ||||| ||||  ||||||    
T  6322609 ctttttagttataactttgctaaaagacaccttcataaaaattaatttgtgttttttaacaaatgctaatagaataacttgttaaaaaacaccctcataa 6322510  T
Q  100 aaggtgtcttctagctaaaccc 121  Q
    ||| ||||||||||| ||||||    
T  6322509 aagatgtcttctagcaaaaccc 6322488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 18102542 - 18102450
Alignment:
Q  28 accttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    |||||||||||||||||||||||||||||| |||||||  |||| |||||||||||||| |||| |||  ||||| | ||||||||| |||||    
T  18102542 accttcataaaaattagttggtgtcttttaacaaatgctcatagaataacttgctaaaaaacaccttcgcaaaagatatcttctagcaaaacc 18102450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19104317 - 19104408
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacac 91  Q
    ||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||| |||||||  |||  |||| ||||||||||||||    
T  19104317 ctttttagttataactttgctaaaacacaccttcgtaaaaattagttggtgtcttttaacaaatgctcataaaataatttgctaaaagacac 19104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33730555 - 33730627
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| || ||||||||||||||||||    
T  33730555 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctatagga 33730627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 30416461 - 30416539
Alignment:
Q  41 ttagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||  ||| ||||||||  || ||||||||| ||||    
T  30416461 ttagttggtgtcttttagcaaatacctataggacaacttgttaaaaagcaccttcataaagagtatcttctagcaaaac 30416539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 7190696 - 7190635
Alignment:
Q  27 caccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaaga 88  Q
    |||||||||||||||||||||||||||||||  |||| | ||||| |||||||| |||||||    
T  7190696 caccttcataaaaattagttggtgtcttttaataaatacttatagaataacttgataaaaga 7190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 9533486 - 9533376
Alignment:
Q  3 ttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgc----ctataggataacttgctaaaagacacattcat 97  Q
    ||||| ||||||||| | |||||| |||||||||||||||| ||| |||||||||| |||||||     ||||| ||||||| ||||||||||  |||||    
T  9533486 ttttaattataactttgttaaaagacaccttcataaaaatttgttagtgtcttttaacaaatgctcatatatagaataacttactaaaagacatcttcat 9533387  T
Q  98 aaaaggtgtct 108  Q
     ||||||||||    
T  9533386 taaaggtgtct 9533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14488332 - 14488401
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| || |||||||||||||||    
T  14488332 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtattctagcaaatgcctata 14488401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 34007563 - 34007603
Alignment:
Q  146 aactagatctcctacccgtgctgtcgcacgggtcatttata 186  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  34007563 aactagatctcctacccgtgctgtcgcacgggtcatatata 34007603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 14975445 - 14975498
Alignment:
Q  3 ttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtctttta 57  Q
    |||||||||||| |||||||||  ||||||||| |||||||||||||||||||||    
T  14975445 ttttagttataatttgctaaaaaacaccttcat-aaaattagttggtgtctttta 14975498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 4898286 - 4898214
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcat-aaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||||||  |||||| || |||||| |||  |||| || ||||||||||||||||||    
T  4898286 tttttagttataacttgctaaaacacaccttaataaaaaataagtgagtgtattctagcaaatgcctatagga 4898214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4898605 - 4898533
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| |  ||||||||||||||||||    
T  4898605 ctttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaatgcctatagga 4898533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25061688 - 25061760
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||| |||||  |||||||  | |||| ||||||||| |  ||||||||||||||||||    
T  25061688 ctttttagttataacttgttaaaacacaccttctaacaaataagttggtgtatcctagcaaatgcctatagga 25061760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25090558 - 25090614
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtctttt 56  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||| ||||||| ||||    
T  25090558 ctttttagttataactttgctgaaagacaccttcataaaaattaattggtgtttttt 25090614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4184421 - 4184347
Alignment:
Q  1 ctttttagttata-acttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggat 74  Q
    ||||||||||||  |||||||||||  | |||||  |||||| ||||||||| || |||||||||||||||||||    
T  4184421 ctttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaatgcctataggat 4184347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9955808 - 9955746
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  9955808 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 9955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 19143671 - 19143629
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaacc 120  Q
    |||||||||||||| |||||||||||| ||||||||| |||||    
T  19143671 ttgctaaaagacaccttcataaaaggtatcttctagcaaaacc 19143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 29646401 - 29646462
Alignment:
Q  2 tttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    |||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  29646401 tttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 29646462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 22423946 - 22423986
Alignment:
Q  73 ataacttgctaaaagacacattcataaaaggtgtcttctag 113  Q
    |||||||||||||  |||||||||||||| |||||||||||    
T  22423946 ataacttgctaaagaacacattcataaaaagtgtcttctag 22423986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31132889 - 31132829
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaa 61  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||    
T  31132889 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaa 31132829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9270 - 9157
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || |||||||| ||||||||||||| ||||||||| |||||||||||||||  |||| |||||||||||||| |||| |||||||    
T  9270 ctttttagttataattttgctaaaagacaccttcataaaa-ttagttggtatcttttagcaaatgctcatagaataacttgctaaaatacaccttcataa 9172  T
Q  100 aaggtgtcttctagc 114  Q
    |||||||||||||||    
T  9171 aaggtgtcttctagc 9157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 478429 - 478315
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||   |||| |||||||||||||| |||| |||||||    
T  478429 ctttttagttataactttgttaaaagacaccttcataaaaattagttggtgtcttttaacaaatgttcatagaataacttgctaaaaaacaccttcataa 478330  T
Q  100 aaggtgtcttctagc 114  Q
    || ||||||||||||    
T  478329 aaagtgtcttctagc 478315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 94846 - 94909
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  94846 ctttttagttataactttgctaaaagacaccttcataaaaattagttggtgtcttttaacaaat 94909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 95051 - 95088
Alignment:
Q  77 cttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  95051 cttgctaaaagacacattcttaaaaggtgtcttctagc 95088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 121670 - 121789
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    |||||||||||||| || |||||||| | | ||||||||||||| |||||||||||||||||||||  |||| |||||||| |||||||||| |||||||    
T  121670 ctttttagttataattttgctaaaagactcattcataaaaattaattggtgtcttttagcaaatgctcatagaataacttgttaaaagacaccttcataa 121769  T
Q  100 aaggtgtcttctagctaaac 119  Q
    || |||| || |||| ||||    
T  121770 aatgtgttttatagcaaaac 121789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 231166 - 231286
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||| ||||||||| | || ||| ||||||||||||||||||||||| ||||||| ||||||   |||| |||| ||| |||||||||| |||||||    
T  231166 ctttttaattataactttgttataagacaccttcataaaaattagttggtatcttttaacaaatgttcatagaataatttgttaaaagacaccttcataa 231265  T
Q  100 aaggtgtcttctagctaaacc 120  Q
    || |||||||||||| |||||    
T  231266 aatgtgtcttctagcaaaacc 231286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17905 - 17796
Alignment:
Q  1 ctttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataa 99  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||| ||||||   || |  ||| || |||||| ||| ||||||||    
T  17905 ctttttagttataactttgctaaaaaacaccttcataaaaattagttgatgtcttttaacaaatgttaattgagtaaattactaaaaaacatattcataa 17806  T
Q  100 aaggtgtctt 109  Q
    ||||||||||    
T  17805 aaggtgtctt 17796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 77103 - 77030
Alignment:
Q  41 ttagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggtgtcttctagc 114  Q
    ||||||||||||||||||||||||  || || |||||||||||||| |||| ||||||||  ||||||||||||    
T  77103 ttagttggtgtcttttagcaaatgtttacagaataacttgctaaaaaacaccttcataaatagtgtcttctagc 77030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 49934 - 49821
Alignment:
Q  6 tagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctataggataacttgctaaaagacacattcataaaaggt 104  Q
    |||||||||||| | |||||| ||| || |||||||||| ||||| | ||||| ||||||   |||  |||||||||||||||| |||||||||||||||    
T  49934 tagttataactttgttaaaagacacatttataaaaattaattggtat-ttttaacaaatgttcataaaataacttgctaaaagatacattcataaaaggt 49836  T
Q  105 gtcttctagctaaac 119  Q
    | |||||||| ||||    
T  49835 ggcttctagcaaaac 49821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 3835 - 3772
Alignment:
Q  2 tttttagttataactt-gctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgc 65  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||| |||||||    
T  3835 tttttagttataactttgctaaaaa-caccttcataaaaattagttggtgtctattaacaaatgc 3772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9892 - 9820
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  9892 ctttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 9820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 58080 - 58149
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctata 70  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || |||||||| ||||||    
T  58080 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaatccctata 58149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5720 - 5792
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  ||| |||  |||||| ||| ||||| || ||||||||| ||||||||    
T  5720 ctttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtattctagcaaatgtctatagga 5792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20779 - 20707
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||   ||||||  |||||| ||| ||||| |  ||||||||||||||||||    
T  20779 ctttttagttataacttgctaaaacataccttctaaaaaataagtgggtgtatcctagcaaatgcctatagga 20707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6284 - 6222
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaat 63  Q
    ||||||||||||||||||||||||  | ||  ||||||||||||| ||||| || ||||||||    
T  6284 ctttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaat 6222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 35952 - 35993
Alignment:
Q  78 ttgctaaaagacacattcataaaaggtgtcttctagctaaac 119  Q
    |||||||||||||| |||||||||| ||||||||||| ||||    
T  35952 ttgctaaaagacaccttcataaaagttgtcttctagcaaaac 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4097 - 4168
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    |||||||||||||||||||| |||  |||||||  |||||| ||| |||||  |||||||||||| |||||||    
T  4097 ctttttagttataacttgctcaaacacaccttctaaaaaataagtgggtgt-atttagcaaatgcttatagga 4168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6576 - 6648
Alignment:
Q  1 ctttttagttataacttgctaaaaggcaccttcataaaaattagttggtgtcttttagcaaatgcctatagga 73  Q
    ||||||||||||||||||||||||  |||||||  |||||| | | | ||| |  ||||||||||||||||||    
T  6576 ctttttagttataacttgctaaaatacaccttctaaaaaataaatagatgtatcctagcaaatgcctatagga 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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