View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14463_high_6 (Length: 365)

Name: NF14463_high_6
Description: NF14463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14463_high_6
NF14463_high_6
[»] chr1 (57 HSPs)
chr1 (18-272)||(52439143-52439404)
chr1 (18-346)||(49619601-49619938)
chr1 (18-272)||(49618428-49618689)
chr1 (37-272)||(40778388-40778630)
chr1 (18-127)||(38451549-38451658)
chr1 (17-252)||(40779528-40779763)
chr1 (18-186)||(38451659-38451827)
chr1 (18-148)||(52437905-52438035)
chr1 (18-97)||(25787204-25787283)
chr1 (18-96)||(25785965-25786043)
chr1 (17-96)||(13929291-13929370)
chr1 (26-97)||(48467266-48467337)
chr1 (18-96)||(47411489-47411567)
chr1 (294-346)||(40779422-40779474)
chr1 (21-96)||(13930716-13930791)
chr1 (18-77)||(16218538-16218597)
chr1 (158-252)||(45042746-45042840)
chr1 (18-93)||(47560136-47560211)
chr1 (18-96)||(14071244-14071322)
chr1 (34-96)||(21246516-21246578)
chr1 (34-96)||(43808562-43808624)
chr1 (34-102)||(34531676-34531744)
chr1 (21-77)||(34653435-34653491)
chr1 (18-77)||(44977218-44977277)
chr1 (34-96)||(2236826-2236888)
chr1 (34-96)||(9822665-9822726)
chr1 (34-96)||(30743100-30743162)
chr1 (34-96)||(35683068-35683130)
chr1 (30-96)||(48934250-48934316)
chr1 (34-96)||(48935151-48935213)
chr1 (19-97)||(49139799-49139877)
chr1 (35-96)||(13641271-13641332)
chr1 (301-346)||(40778666-40778711)
chr1 (18-95)||(47136729-47136806)
chr1 (20-73)||(48467595-48467648)
chr1 (197-265)||(51694372-51694440)
chr1 (17-77)||(52741484-52741544)
chr1 (18-77)||(21276991-21277050)
chr1 (17-96)||(26056188-26056267)
chr1 (18-73)||(33793776-33793831)
chr1 (158-252)||(40721921-40722016)
chr1 (18-77)||(44979432-44979491)
chr1 (18-97)||(47410981-47411060)
chr1 (18-77)||(52181365-52181424)
chr1 (18-77)||(52743036-52743095)
chr1 (34-96)||(2238019-2238081)
chr1 (34-96)||(9119815-9119877)
chr1 (34-96)||(10579653-10579715)
chr1 (18-96)||(37624611-37624689)
chr1 (30-92)||(40135382-40135444)
chr1 (287-337)||(40187891-40187941)
chr1 (196-238)||(49801877-49801919)
chr1 (34-96)||(50679862-50679924)
chr1 (34-75)||(38458099-38458140)
chr1 (34-94)||(9123442-9123502)
chr1 (19-95)||(9633773-9633849)
chr1 (197-265)||(47533725-47533791)
[»] chr7 (78 HSPs)
chr7 (18-272)||(4973913-4974168)
chr7 (17-265)||(22794195-22794441)
chr7 (34-272)||(29657002-29657248)
chr7 (18-210)||(4973510-4973702)
chr7 (26-212)||(32894721-32894908)
chr7 (18-270)||(29658475-29658732)
chr7 (35-209)||(32893470-32893645)
chr7 (166-264)||(46203526-46203625)
chr7 (18-96)||(22061836-22061914)
chr7 (17-96)||(43930315-43930394)
chr7 (18-96)||(43006382-43006460)
chr7 (18-96)||(4858385-4858463)
chr7 (18-96)||(25153655-25153733)
chr7 (18-96)||(40926560-40926638)
chr7 (158-272)||(29409098-29409217)
chr7 (165-272)||(36395957-36396071)
chr7 (18-96)||(22744743-22744821)
chr7 (16-241)||(47536747-47536971)
chr7 (40-96)||(7146799-7146855)
chr7 (61-105)||(23153662-23153706)
chr7 (54-145)||(47535692-47535783)
chr7 (18-105)||(16955689-16955776)
chr7 (30-96)||(17287083-17287149)
chr7 (17-96)||(19279653-19279732)
chr7 (18-105)||(43704484-43704571)
chr7 (34-96)||(7148099-7148161)
chr7 (18-96)||(33459584-33459662)
chr7 (34-96)||(41126252-41126314)
chr7 (18-72)||(44114720-44114774)
chr7 (34-96)||(47537081-47537143)
chr7 (20-96)||(4857200-4857276)
chr7 (287-346)||(4973829-4973889)
chr7 (17-77)||(18802449-18802509)
chr7 (158-265)||(19218853-19218960)
chr7 (17-96)||(30224017-30224096)
chr7 (17-68)||(35128231-35128282)
chr7 (18-105)||(36584937-36585024)
chr7 (158-272)||(45398665-45398783)
chr7 (19-77)||(25154996-25155054)
chr7 (61-99)||(33070645-33070683)
chr7 (34-96)||(36673877-36673939)
chr7 (34-96)||(40881104-40881166)
chr7 (34-96)||(41616637-41616699)
chr7 (18-96)||(43931907-43931985)
chr7 (37-95)||(45721808-45721866)
chr7 (35-96)||(14206687-14206748)
chr7 (35-96)||(14215377-14215438)
chr7 (18-95)||(22060460-22060537)
chr7 (19-96)||(22746361-22746438)
chr7 (27-96)||(23350926-23350995)
chr7 (294-346)||(22794117-22794169)
chr7 (287-346)||(29657270-29657330)
chr7 (17-77)||(34558361-34558421)
chr7 (26-77)||(14109129-14109180)
chr7 (26-77)||(14419086-14419137)
chr7 (38-105)||(38002546-38002613)
chr7 (35-102)||(41127206-41127273)
chr7 (62-105)||(46196897-46196940)
chr7 (66-105)||(46203686-46203725)
chr7 (18-77)||(46674994-46675053)
chr7 (34-92)||(2904092-2904150)
chr7 (34-96)||(17288261-17288323)
chr7 (34-96)||(19069930-19069992)
chr7 (18-96)||(19278350-19278428)
chr7 (34-96)||(21171527-21171589)
chr7 (34-96)||(29344177-29344239)
chr7 (34-96)||(38001517-38001579)
chr7 (18-96)||(40930415-40930493)
chr7 (19-77)||(41516404-41516462)
chr7 (18-96)||(43007690-43007768)
chr7 (18-96)||(46457067-46457145)
chr7 (301-346)||(32893724-32893769)
chr7 (43-96)||(46673512-46673565)
chr7 (70-102)||(16957441-16957473)
chr7 (34-86)||(19105587-19105639)
chr7 (166-214)||(29408391-29408439)
chr7 (25-89)||(42520227-42520290)
chr7 (17-97)||(43935181-43935261)
[»] chr5 (59 HSPs)
chr5 (19-272)||(14357740-14358000)
chr5 (18-272)||(30915976-30916237)
chr5 (19-252)||(33362451-33362685)
chr5 (37-252)||(14356448-14356662)
chr5 (18-133)||(30912311-30912426)
chr5 (18-241)||(42962020-42962242)
chr5 (18-96)||(12936143-12936221)
chr5 (62-133)||(9038502-9038573)
chr5 (18-97)||(19523980-19524059)
chr5 (18-77)||(19525348-19525407)
chr5 (18-96)||(12950301-12950379)
chr5 (34-95)||(39134680-39134741)
chr5 (18-102)||(19825871-19825955)
chr5 (17-97)||(27894063-27894143)
chr5 (18-77)||(12933748-12933807)
chr5 (18-77)||(41905172-41905231)
chr5 (54-105)||(42963247-42963298)
chr5 (19-97)||(224630-224708)
chr5 (18-96)||(8762441-8762519)
chr5 (34-96)||(11907202-11907264)
chr5 (18-96)||(18677973-18678051)
chr5 (18-96)||(19827181-19827259)
chr5 (294-346)||(14357660-14357712)
chr5 (166-237)||(30915642-30915714)
chr5 (18-77)||(328214-328273)
chr5 (17-96)||(1273085-1273164)
chr5 (18-77)||(6629728-6629787)
chr5 (18-77)||(12947909-12947968)
chr5 (34-96)||(4568015-4568077)
chr5 (18-96)||(5382939-5383017)
chr5 (34-92)||(23679160-23679218)
chr5 (34-92)||(23855594-23855652)
chr5 (158-272)||(30673457-30673578)
chr5 (18-80)||(40059385-40059447)
chr5 (35-96)||(20991690-20991751)
chr5 (294-346)||(30915765-30915817)
chr5 (19-77)||(223223-223282)
chr5 (34-96)||(19050762-19050824)
chr5 (34-101)||(20841827-20841894)
chr5 (18-77)||(26403304-26403363)
chr5 (158-252)||(30674714-30674809)
chr5 (287-345)||(33362363-33362422)
chr5 (34-101)||(36442238-36442305)
chr5 (34-96)||(1155982-1156044)
chr5 (18-96)||(5384387-5384465)
chr5 (34-96)||(10570361-10570423)
chr5 (34-96)||(15509208-15509270)
chr5 (34-96)||(15510304-15510366)
chr5 (34-96)||(21387650-21387712)
chr5 (34-96)||(24070418-24070480)
chr5 (18-96)||(39135689-39135767)
chr5 (34-96)||(42382151-42382213)
chr5 (39-96)||(22650669-22650726)
chr5 (35-96)||(24071484-24071545)
chr5 (41-96)||(641921-641976)
chr5 (18-94)||(1273383-1273459)
chr5 (18-50)||(1663184-1663216)
chr5 (197-252)||(4032002-4032058)
chr5 (34-102)||(20988703-20988771)
[»] chr8 (60 HSPs)
chr8 (18-272)||(11080890-11081151)
chr8 (38-237)||(42307513-42307712)
chr8 (19-144)||(42314809-42314934)
chr8 (18-96)||(31623903-31623981)
chr8 (33-96)||(16346111-16346174)
chr8 (18-96)||(36756061-36756139)
chr8 (27-97)||(37324728-37324798)
chr8 (18-96)||(38591048-38591126)
chr8 (18-96)||(41867957-41868035)
chr8 (18-96)||(43386743-43386821)
chr8 (18-95)||(36940075-36940152)
chr8 (158-237)||(35462888-35462968)
chr8 (18-94)||(38790296-38790372)
chr8 (30-96)||(39244-39310)
chr8 (18-77)||(10053804-10053863)
chr8 (18-93)||(37323345-37323420)
chr8 (34-96)||(12818767-12818829)
chr8 (159-252)||(20066216-20066310)
chr8 (18-96)||(43277962-43278040)
chr8 (290-346)||(42307759-42307815)
chr8 (215-259)||(42314696-42314740)
chr8 (18-93)||(117045-117120)
chr8 (34-97)||(162640-162703)
chr8 (34-93)||(22914234-22914293)
chr8 (18-77)||(36070175-36070234)
chr8 (18-77)||(36071438-36071497)
chr8 (18-77)||(38589818-38589876)
chr8 (18-77)||(43275747-43275806)
chr8 (18-136)||(43414378-43414496)
chr8 (18-105)||(43416000-43416087)
chr8 (34-96)||(9189407-9189469)
chr8 (34-96)||(24068343-24068405)
chr8 (18-96)||(29739684-29739762)
chr8 (18-96)||(37472400-37472478)
chr8 (18-96)||(37474077-37474155)
chr8 (19-96)||(19913490-19913567)
chr8 (287-346)||(11080808-11080868)
chr8 (18-97)||(37982-38061)
chr8 (33-96)||(4534046-4534109)
chr8 (37-96)||(9190483-9190542)
chr8 (18-77)||(16363872-16363931)
chr8 (311-346)||(16497115-16497150)
chr8 (37-96)||(31625425-31625484)
chr8 (21-96)||(39325875-39325950)
chr8 (18-77)||(39544927-39544986)
chr8 (241-272)||(42307703-42307734)
chr8 (160-252)||(12818892-12818986)
chr8 (34-96)||(12820139-12820201)
chr8 (34-96)||(21524635-21524697)
chr8 (18-96)||(35945478-35945556)
chr8 (18-96)||(39546718-39546796)
chr8 (18-96)||(41866891-41866969)
chr8 (18-75)||(3237702-3237759)
chr8 (35-96)||(6843769-6843830)
chr8 (27-96)||(10398676-10398745)
chr8 (20-77)||(14820192-14820249)
chr8 (17-77)||(7487447-7487507)
chr8 (62-102)||(20066118-20066158)
chr8 (61-97)||(36757270-36757306)
chr8 (18-102)||(39323784-39323868)
[»] chr3 (78 HSPs)
chr3 (18-272)||(14206639-14206899)
chr3 (18-272)||(14214387-14214647)
chr3 (18-272)||(48337986-48338236)
chr3 (18-209)||(48336344-48336535)
chr3 (62-252)||(8895197-8895388)
chr3 (34-148)||(14213145-14213259)
chr3 (18-96)||(25583111-25583189)
chr3 (18-96)||(41387474-41387552)
chr3 (18-97)||(53809533-53809612)
chr3 (62-146)||(50719696-50719781)
chr3 (62-146)||(50793067-50793152)
chr3 (18-96)||(17350143-17350221)
chr3 (34-96)||(19579233-19579295)
chr3 (18-95)||(8371217-8371294)
chr3 (18-95)||(41386127-41386204)
chr3 (34-94)||(45730650-45730710)
chr3 (18-77)||(42632703-42632762)
chr3 (18-77)||(42633946-42634005)
chr3 (18-77)||(53808315-53808374)
chr3 (34-96)||(5416211-5416273)
chr3 (18-96)||(8372657-8372735)
chr3 (18-96)||(10987694-10987772)
chr3 (18-96)||(26798947-26799025)
chr3 (18-96)||(32980493-32980571)
chr3 (18-96)||(51825662-51825740)
chr3 (18-96)||(54752613-54752691)
chr3 (19-96)||(39133015-39133092)
chr3 (34-102)||(52293558-52293626)
chr3 (158-252)||(2763970-2764065)
chr3 (18-89)||(21247233-21247304)
chr3 (18-97)||(25585873-25585952)
chr3 (34-96)||(1031829-1031891)
chr3 (34-96)||(32973152-32973214)
chr3 (34-96)||(32974264-32974326)
chr3 (34-96)||(33000841-33000903)
chr3 (18-96)||(36626728-36626806)
chr3 (34-96)||(48035365-48035427)
chr3 (34-96)||(50150734-50150796)
chr3 (34-96)||(51401392-51401454)
chr3 (34-96)||(53047910-53047972)
chr3 (18-96)||(54654007-54654085)
chr3 (34-97)||(2225064-2225127)
chr3 (27-87)||(18024576-18024636)
chr3 (27-87)||(30385192-30385252)
chr3 (27-87)||(42592411-42592471)
chr3 (160-252)||(50002552-50002643)
chr3 (18-102)||(50003258-50003342)
chr3 (34-77)||(5417108-5417151)
chr3 (34-77)||(11483047-11483090)
chr3 (34-93)||(39530808-39530867)
chr3 (18-97)||(47808146-47808225)
chr3 (18-97)||(49122042-49122121)
chr3 (34-77)||(52292607-52292650)
chr3 (37-96)||(53342732-53342791)
chr3 (19-97)||(11219428-11219506)
chr3 (34-96)||(12062425-12062487)
chr3 (18-76)||(17345308-17345366)
chr3 (34-96)||(19579335-19579397)
chr3 (19-77)||(19622003-19622061)
chr3 (294-336)||(36627198-36627240)
chr3 (34-96)||(39287483-39287545)
chr3 (38-96)||(39288480-39288538)
chr3 (26-96)||(43101899-43101969)
chr3 (183-252)||(46688567-46688637)
chr3 (34-96)||(48867471-48867533)
chr3 (34-96)||(53049078-53049140)
chr3 (287-337)||(54353312-54353362)
chr3 (35-77)||(55442608-55442650)
chr3 (34-96)||(55443591-55443653)
chr3 (27-96)||(17934060-17934129)
chr3 (40-93)||(19253046-19253099)
chr3 (36-93)||(32999812-32999869)
chr3 (35-96)||(52705349-52705410)
chr3 (34-145)||(2088855-2088965)
chr3 (34-102)||(7583483-7583551)
chr3 (17-81)||(28909658-28909722)
chr3 (17-69)||(47806814-47806866)
chr3 (35-99)||(53901583-53901647)
[»] chr4 (85 HSPs)
chr4 (29-252)||(49923649-49923873)
chr4 (18-209)||(54372743-54372934)
chr4 (18-272)||(37642395-37642660)
chr4 (18-209)||(54373880-54374071)
chr4 (39-272)||(49922525-49922765)
chr4 (44-273)||(5546940-5547172)
chr4 (71-242)||(20945371-20945543)
chr4 (18-241)||(21570320-21570542)
chr4 (18-77)||(11115040-11115099)
chr4 (161-242)||(20944416-20944498)
chr4 (18-96)||(27408760-27408838)
chr4 (18-96)||(37558995-37559073)
chr4 (18-96)||(37560340-37560418)
chr4 (18-96)||(43894102-43894180)
chr4 (18-75)||(49923858-49923915)
chr4 (18-77)||(6616271-6616330)
chr4 (18-96)||(33377405-33377483)
chr4 (17-105)||(21569246-21569334)
chr4 (294-346)||(54373785-54373837)
chr4 (34-93)||(5417317-5417376)
chr4 (35-86)||(5548674-5548725)
chr4 (18-77)||(29686253-29686312)
chr4 (18-77)||(39590938-39590997)
chr4 (18-77)||(47668657-47668716)
chr4 (17-96)||(55953893-55953972)
chr4 (18-96)||(86800-86878)
chr4 (34-96)||(11482809-11482871)
chr4 (19-96)||(1273474-1273550)
chr4 (34-99)||(43709912-43709977)
chr4 (165-272)||(46425862-46425973)
chr4 (34-95)||(52658924-52658985)
chr4 (18-98)||(30682717-30682797)
chr4 (294-346)||(49923543-49923595)
chr4 (34-96)||(306590-306652)
chr4 (18-97)||(11113739-11113818)
chr4 (18-97)||(21104350-21104429)
chr4 (18-77)||(35789650-35789709)
chr4 (18-77)||(39592349-39592408)
chr4 (34-96)||(46794853-46794915)
chr4 (34-96)||(2310823-2310885)
chr4 (165-272)||(5548514-5548627)
chr4 (34-96)||(12396915-12396977)
chr4 (18-96)||(15786949-15787027)
chr4 (34-96)||(23752029-23752091)
chr4 (34-92)||(26045145-26045203)
chr4 (34-96)||(26376342-26376404)
chr4 (34-96)||(29833385-29833447)
chr4 (27-101)||(32617227-32617301)
chr4 (18-96)||(46796067-46796145)
chr4 (34-96)||(47573685-47573747)
chr4 (20-105)||(42713462-42713547)
chr4 (294-346)||(5547181-5547233)
chr4 (17-77)||(10403276-10403335)
chr4 (62-145)||(31204595-31204678)
chr4 (29-105)||(31205741-31205817)
chr4 (40-96)||(35787815-35787871)
chr4 (287-346)||(37642315-37642375)
chr4 (34-77)||(96741-96784)
chr4 (18-97)||(31711089-31711168)
chr4 (30-101)||(36611056-36611127)
chr4 (18-89)||(38371853-38371924)
chr4 (34-77)||(38555336-38555379)
chr4 (18-77)||(44128394-44128453)
chr4 (18-96)||(15787543-15787621)
chr4 (26-96)||(28103527-28103597)
chr4 (19-81)||(28589782-28589844)
chr4 (18-72)||(29688039-29688093)
chr4 (18-96)||(33376215-33376293)
chr4 (19-97)||(38553927-38554005)
chr4 (75-136)||(44217627-44217688)
chr4 (18-96)||(44305020-44305098)
chr4 (159-252)||(48499507-48499598)
chr4 (34-96)||(50498013-50498075)
chr4 (27-96)||(32617575-32617644)
chr4 (34-99)||(47242965-47243030)
chr4 (35-96)||(47244031-47244092)
chr4 (35-96)||(47572600-47572661)
chr4 (35-96)||(48413592-48413653)
chr4 (47-95)||(5688679-5688727)
chr4 (34-102)||(15445449-15445517)
chr4 (29-77)||(40143662-40143710)
chr4 (287-346)||(49922786-49922846)
chr4 (35-102)||(52880827-52880895)
chr4 (37-77)||(52981210-52981250)
chr4 (36-96)||(53400200-53400260)
[»] chr6 (44 HSPs)
chr6 (19-252)||(682263-682497)
chr6 (18-252)||(683426-683659)
chr6 (18-96)||(31738360-31738438)
chr6 (17-98)||(8411082-8411163)
chr6 (34-96)||(1757535-1757597)
chr6 (18-96)||(5311276-5311354)
chr6 (18-77)||(33802077-33802136)
chr6 (18-96)||(8412357-8412435)
chr6 (30-96)||(8447230-8447296)
chr6 (30-96)||(8456034-8456100)
chr6 (18-94)||(27108217-27108293)
chr6 (18-94)||(27150014-27150090)
chr6 (18-77)||(18139547-18139606)
chr6 (33-99)||(1692086-1692152)
chr6 (39-96)||(1693022-1693079)
chr6 (164-261)||(1948861-1948958)
chr6 (35-96)||(11724337-11724398)
chr6 (35-96)||(22299944-22300005)
chr6 (200-252)||(23644263-23644316)
chr6 (27-87)||(9899571-9899631)
chr6 (34-102)||(13173050-13173118)
chr6 (34-102)||(19368553-19368621)
chr6 (62-145)||(25439099-25439182)
chr6 (27-87)||(30860319-30860379)
chr6 (19-102)||(13176368-13176451)
chr6 (54-105)||(13562328-13562379)
chr6 (62-105)||(18230363-18230406)
chr6 (167-249)||(23638574-23638657)
chr6 (18-105)||(24318096-24318183)
chr6 (17-96)||(28225420-28225499)
chr6 (34-96)||(9927619-9927681)
chr6 (39-93)||(14174121-14174175)
chr6 (39-93)||(14178657-14178711)
chr6 (294-344)||(18498261-18498311)
chr6 (34-96)||(19048262-19048324)
chr6 (34-96)||(19367730-19367792)
chr6 (71-105)||(24317099-24317133)
chr6 (34-96)||(31740313-31740375)
chr6 (301-346)||(682550-682595)
chr6 (35-96)||(18773668-18773729)
chr6 (34-95)||(26584079-26584140)
chr6 (27-96)||(30859931-30860000)
chr6 (62-102)||(10673650-10673690)
chr6 (71-99)||(25437833-25437861)
[»] chr2 (39 HSPs)
chr2 (55-252)||(20921544-20921742)
chr2 (37-251)||(12364206-12364420)
chr2 (87-265)||(12365891-12366066)
chr2 (18-96)||(20921478-20921556)
chr2 (18-96)||(42596557-42596635)
chr2 (18-96)||(37867753-37867831)
chr2 (164-241)||(370910-370986)
chr2 (35-96)||(33553406-33553467)
chr2 (34-102)||(3255913-3255981)
chr2 (34-102)||(4630119-4630187)
chr2 (17-97)||(35799508-35799588)
chr2 (26-77)||(23178942-23178993)
chr2 (26-77)||(23590199-23590250)
chr2 (39-145)||(1257507-1257613)
chr2 (34-96)||(3665237-3665299)
chr2 (18-92)||(11575500-11575574)
chr2 (18-96)||(41795993-41796071)
chr2 (54-145)||(371959-372050)
chr2 (18-96)||(7038373-7038451)
chr2 (37-102)||(33836785-33836850)
chr2 (27-96)||(39110083-39110152)
chr2 (21-96)||(2581803-2581878)
chr2 (29-96)||(3666309-3666376)
chr2 (18-77)||(32614382-32614441)
chr2 (34-77)||(33837815-33837858)
chr2 (18-81)||(35061271-35061334)
chr2 (18-96)||(7036963-7037041)
chr2 (19-77)||(10368445-10368503)
chr2 (39-93)||(11386642-11386696)
chr2 (34-96)||(12854145-12854207)
chr2 (34-96)||(20630712-20630774)
chr2 (17-67)||(28109939-28109989)
chr2 (34-96)||(29424653-29424715)
chr2 (38-96)||(39272251-39272309)
chr2 (18-96)||(42027190-42027268)
chr2 (34-95)||(6706939-6707000)
chr2 (34-75)||(30202945-30202986)
chr2 (17-77)||(4701547-4701607)
chr2 (27-87)||(36099304-36099364)
[»] scaffold0065 (3 HSPs)
scaffold0065 (18-272)||(35360-35611)
scaffold0065 (38-148)||(36735-36845)
scaffold0065 (164-272)||(36584-36685)
[»] scaffold0034 (4 HSPs)
scaffold0034 (34-184)||(98634-98784)
scaffold0034 (18-146)||(98046-98174)
scaffold0034 (286-346)||(98318-98379)
scaffold0034 (241-272)||(98264-98295)
[»] scaffold0041 (3 HSPs)
scaffold0041 (54-272)||(982-1207)
scaffold0041 (62-252)||(608-799)
scaffold0041 (34-96)||(85117-85179)
[»] scaffold0045 (1 HSPs)
scaffold0045 (21-96)||(77222-77297)
[»] scaffold0046 (2 HSPs)
scaffold0046 (18-96)||(23403-23481)
scaffold0046 (18-96)||(24856-24934)
[»] scaffold0024 (1 HSPs)
scaffold0024 (18-74)||(73049-73105)
[»] scaffold0013 (2 HSPs)
scaffold0013 (18-77)||(96157-96216)
scaffold0013 (18-96)||(96856-96934)
[»] scaffold0009 (1 HSPs)
scaffold0009 (34-96)||(205593-205655)
[»] scaffold1337 (1 HSPs)
scaffold1337 (71-216)||(282-428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (159-239)||(23869-23950)
[»] scaffold1974 (1 HSPs)
scaffold1974 (18-77)||(688-747)
[»] scaffold1878 (1 HSPs)
scaffold1878 (18-77)||(527-586)
[»] scaffold0290 (2 HSPs)
scaffold0290 (18-77)||(9538-9597)
scaffold0290 (26-77)||(8384-8435)
[»] scaffold0025 (1 HSPs)
scaffold0025 (17-96)||(56741-56820)
[»] scaffold0178 (1 HSPs)
scaffold0178 (34-96)||(2306-2368)
[»] scaffold2127 (1 HSPs)
scaffold2127 (18-95)||(557-634)
[»] scaffold0084 (2 HSPs)
scaffold0084 (35-92)||(13249-13306)
scaffold0084 (20-96)||(11705-11781)
[»] scaffold0141 (1 HSPs)
scaffold0141 (197-252)||(35167-35222)
[»] scaffold0049 (1 HSPs)
scaffold0049 (197-252)||(79590-79645)
[»] scaffold0038 (1 HSPs)
scaffold0038 (17-96)||(25918-25997)
[»] scaffold0177 (1 HSPs)
scaffold0177 (34-96)||(1768-1830)
[»] scaffold0171 (1 HSPs)
scaffold0171 (294-344)||(29032-29082)


Alignment Details
Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 52439404 - 52439143
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  52439404 cttaatacatcatttggtcccttaacttattttctgttttcaatttggtcctctaactattaaacgtttcaaattgatcctttatcttctttccatcatt 52439305  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 216  Q
    ||||||||| | ||||||| ||||||||||| |       ||||||||||||||||||||  ||||||| |||||||| ||||||||||||| |||| ||    
T  52439304 caatttggttctattttattcattttaacacccataaaaaggagatcgttggataaatgaagtctatcagatctaactgtgtatcaccaacacctaattt 52439205  T
Q  217 attttaattttcttcatcttcttcc------ttcatcttcatacaaccttcatcaatcttca 272  Q
    | |||| ||||||||||| ||||||      |||||||||||||||||||||||||||||||    
T  52439204 actttacttttcttcatcatcttccatcactttcatcttcatacaaccttcatcaatcttca 52439143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 346
Target Start/End: Complemental strand, 49619938 - 49619601
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  49619938 cttaatacatcatttggtcccttaatttattttcagttttcaatttggtcccctaactattaaacgttccaaattggtcctttatcttctttccatcatt 49619839  T
Q  118 caatttggtcc-aattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aat 215  Q
    |||||||||||   |||||| ||||||||| ||        ||||| | || |||||||||| ||||||| || ||||| ||||||||||||| || | |    
T  49619838 caatttggtcctttttttattcattttaaccctaaaaaaaaggagaccattagataaatgaggtctatcagatttaactgtgtatcaccaacacctgatt 49619739  T
Q  216 tattttaattttcttcatcttcttccttcatcttcatacaaccttcatcaatcttca-ca-----accnnnnnnnnattctttc-aaaatttatcttttc 308  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||||||||| ||     | |         ||||||| |||||| ||| ||||    
T  49619738 tattttacttttcttcatcttcttctctcatcttcatacaaccttcatcaatcttcatcatcttcaacttttttttgttctttcaaaaattcatcatttc 49619639  T
Q  309 aacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||||||||||| |||||||||||||||||||||||    
T  49619638 aacttcaacaaaaaccacaaaatcaaacatttaaattt 49619601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 49618428 - 49618689
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  49618428 cttaataaatcattcagtctcttaacttattttcagttttcattttggtcccctaactattaaacgttttaaattggtgttttatcttctttccatcatt 49618527  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca-tctaatt 216  Q
    ||||||||||  ||||||| ||||||||| | |       ||||| ||||||||||||||| ||||||| ||||||||  |||||||||||| |  | ||    
T  49618528 caatttggtcatattttattcattttaacccccaaaaaaaggagaccgttggataaatgaggtctatcagatctaactgagtatcaccaacacttgattt 49618627  T
Q  217 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    |||||| |||| |||||||| |||      ||||| ||||||||||||||||||||||||||    
T  49618628 attttactttttttcatctttttccctcatcttcaccttcatacaaccttcatcaatcttca 49618689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 40778388 - 40778630
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttat 136  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||  || |||||  |||||||||||||| |||||||||||||||| |||||||    
T  40778388 ccttaacttattttcagtttttaatttggtcccttaactattaaacgttctaaattggttctttatcttctttccttcattcaatttggtcctattttat 40778487  T
Q  137 ccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatct 235  Q
      |||||||| |||       ||||| ||||||||||||||| ||||| | |||||||| |||||||||  || || | |||||||| ||||||||||||    
T  40778488 ttattttaaccctcaagaaaaggagaccgttggataaatgaggtctattagatctaactgtgtatcaccggcacctgatttattttacttttcttcatct 40778587  T
Q  236 tcttcc------ttcatcttcatacaaccttcatcaatcttca 272  Q
    ||||||      ||||||||||||||||||| |||||||||||    
T  40778588 tcttccctcattttcatcttcatacaacctttatcaatcttca 40778630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 38451549 - 38451658
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||    
T  38451549 cttaatacatcatttggtcccttaacttattttatgttttcaatttggtcccctaactattaaacgttccaaattggtactttatcttctttccatcatt 38451648  T
Q  118 caatttggtc 127  Q
    ||||||||||    
T  38451649 caatttggtc 38451658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 40779763 - 40779528
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcat 116  Q
    |||||||| ||| ||| ||||||||| |||||||||||||||||||| |||  |||| |||||||||||| || |||||| |||||||| ||| ||| ||    
T  40779763 acttaatacatcgtttggtcccttaatttattttcagttttcaatttagtcatctaattattaaacgttttaaattggtcatttatcttattttcattat 40779664  T
Q  117 tcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aat 215  Q
    |||| ||||||| ||||||| ||||||||| | |       ||||| |||||||||| |||| ||||||| ||| |  | ||||||||||||| || | |    
T  40779663 tcaagttggtcctattttattcattttaacccccaaaaaaaggagaccgttggataagtgaggtctatcatatcaatttgtgtatcaccaacacctgatt 40779564  T
Q  216 tattttaattttcttcatcttcttccttcatcttcat 252  Q
    |||||||  ||| ||||||||||| | ||||||||||    
T  40779563 tattttacattt-ttcatcttctttcctcatcttcat 40779528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 38451827 - 38451659
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| |||  ||||||||||||  ||||||||||||||  |||||||||||||||||  || |||||| || ||||||||| |||||||    
T  38451827 cttaatacatcatttggtcatttaacttattttttgttttcaatttggtatcctaactattaaacgttctaaattggtccttcatcttcttttcatcatt 38451728  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatca 186  Q
    ||||||||||  ||||||| ||||||||||  |       ||||||||||||||||||||  |||||||    
T  38451727 caatttggtcatattttattcattttaacatcctaaaaaaggagatcgttggataaatgaagtctatca 38451659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 52437905 - 52438035
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||| | |||  ||||||||||||| ||||||||||||||| | ||||||||||| |||| || |||||| |||||||||||| |||||||    
T  52437905 cttaatacatcatatggtcttttaacttattttctgttttcaatttggtctcttaactattaaatgttttaaattggtcatttatcttctttacatcatt 52438004  T
Q  118 caatttggtccaattttatccattttaacac 148  Q
     |||||||||| |||||||  ||||||||||    
T  52438005 taatttggtcctattttatttattttaacac 52438035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 25787283 - 25787204
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || ||||||||||||    
T  25787283 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtct 25787204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 25785965 - 25786043
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || |||||||||||    
T  25785965 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 25786043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 13929291 - 13929370
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||||||| |||||||||||||||||  ||||||||||||||||| ||||||| ||  || |||||||||||    
T  13929291 acttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtc 13929370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 48467266 - 48467337
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| |||||||||||||||||  |||||||||||||| |||||||||| ||  |||||||||||||||    
T  48467266 atcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtct 48467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 47411567 - 47411489
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||| |||||| ||||||| |||||||||| ||  || |||||||||||    
T  47411567 cttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtc 47411489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 40779474 - 40779422
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  40779474 aaaattcatcatttcaacttcaacaaaaaccacaaaatcaaacatttaaattt 40779422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 13930791 - 13930716
Alignment:
Q  21 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| ||||||| |||||||||||||||||  |||||||||||||||| |||||||| ||  || |||||||||||    
T  13930791 aatacatcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtc 13930716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 16218597 - 16218538
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || || ||||||||||||    
T  16218597 cttaatagatcatttagtcccttaatttatttttagttttctatctgatcccctaactat 16218538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 45042746 - 45042840
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||| ||||||||||||||| | ||||| |||||||  ||||||| |||||||||| |||||||| | || ||||||||||||| ||||||||||    
T  45042746 ggagaccgttggataaatgaggtatatcagatctaaccgtgtatcatcaacatctaatttattttactattattcatcttcttcc-tcatcttcat 45042840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 47560136 - 47560211
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    ||||||| ||||||| |||||||| |||||||||  |||||| ||||||||||||||||| ||  |||||||||||    
T  47560136 cttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttg 47560211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 14071322 - 14071244
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||||||||| |||||||  |||||||||||||||| |||||||| ||  || |||||||||||    
T  14071322 cttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtc 14071244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 21246578 - 21246516
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||| ||||    
T  21246578 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaattcggtc 21246516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 43808624 - 43808562
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| | ||||||| ||||||||||||||||||||||||||    
T  43808624 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 43808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 34531676 - 34531744
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||| || |||||||||||| ||||    
T  34531676 gtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttat 34531744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 34653435 - 34653491
Alignment:
Q  21 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||| ||||||| |||||||||||||||||| ||||||| ||||||||| |||||||    
T  34653435 aatacatcatttggtcccttaacttattttcggttttcactttggtcccttaactat 34653491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 44977218 - 44977277
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| || |||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  44977218 cttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactat 44977277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 2236826 - 2236888
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  2236826 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 2236888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 9822665 - 9822726
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||| || || ||| ||||||| | ||||||||||||||||||||||||||    
T  9822665 gtcccttaacttattt-caattgtcagtttggtcacttaactattaaacgtttcaatttggtc 9822726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 30743100 - 30743162
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| |||||||||||| | || ||||| ||||||| ||||||||||| ||||||||||||||    
T  30743100 gtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtc 30743162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 35683068 - 35683130
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  35683068 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 35683130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 48934250 - 48934316
Alignment:
Q  30 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| ||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  48934250 tttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48934316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 48935213 - 48935151
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  48935213 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48935151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 49139799 - 49139877
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    |||||| ||||||| |||||||||||||||||  ||||||  ||||||||| ||||||| ||  || ||||||||||||    
T  49139799 ttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtct 49139877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 13641271 - 13641332
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  13641271 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 13641332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 346
Target Start/End: Original strand, 40778666 - 40778711
Alignment:
Q  301 atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||| ||||||||||| |||||| |||||||||||||||||||||||    
T  40778666 atcatttcaacttcagcaaaaaccacaaaatcaaacatttaaattt 40778711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 47136806 - 47136729
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    ||||||| |||||||  ||| ||||||||||||  |||||||||| |||||||||||||| ||  || ||||||||||    
T  47136806 cttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggt 47136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 48467648 - 48467595
Alignment:
Q  20 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaa 73  Q
    ||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||||    
T  48467648 taatacatcgtttggtcccttaacttattttctattttcaatttggtcccctaa 48467595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 51694440 - 51694372
Alignment:
Q  197 tgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcatacaaccttcatca 265  Q
    ||||||||||||| |||||| |||||| | |||||||||||| || |||||||||||||||| |||||||    
T  51694440 tgtatcaccaacacctaatttattttattcttcttcatcttcatc-ttcatcttcatacaacattcatca 51694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 52741484 - 52741544
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||| ||||||| |||||||||||||||||  ||||| | |||||||| ||||||||    
T  52741484 acttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactat 52741544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 21276991 - 21277050
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| || |||| |||||||||||||||||  ||||||||||||||  |||||||||    
T  21276991 cttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactat 21277050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 26056267 - 26056188
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||  ||| |||||||||||||||||  | ||||| ||||||||||||||||| ||  || |||||||||||    
T  26056267 acttaatacatactttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtc 26056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 33793776 - 33793831
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaa 73  Q
    ||||||| |||||||  ||||||||||||||||  ||||||| |||||||||||||    
T  33793776 cttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaa 33793831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 40721921 - 40722016
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||||||||||||||| ||| || || | || ||||  ||||||| ||||| |||||| ||| || ||||||||||||||||||  |||||||||    
T  40721921 ggagatcgttggataaaggaggtccattagatttaacggtgtatcatcaacacctaatttattctacttttcttcatcttcttcccacatcttcat 40722016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 44979432 - 44979491
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||| ||||||||||||||||  ||||||| ||||||| | |||||||    
T  44979432 cttaatacatcatttaatcccttaacttattttttgttttcactttggtctcttaactat 44979491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 47410981 - 47411060
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| || |||| ||||||||| |||||||   ||||||||||| |||||||||||| ||  || ||||||||||||    
T  47410981 cttaatacataatttggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtct 47411060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 52181424 - 52181365
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||||| |||| |||| ||||||||||||   ||||||||||||||| ||||||||    
T  52181424 cttaatagataatttggtcctttaacttattttttattttcaatttggtcctctaactat 52181365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 52743095 - 52743036
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||| ||||||||   |||||| |||||||||||||||||    
T  52743095 cttaatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactat 52743036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 2238081 - 2238019
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  2238081 gtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtc 2238019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 9119815 - 9119877
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||| |||||||||| |||||||| ||  || |||||||||||    
T  9119815 gtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtc 9119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 10579715 - 10579653
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | |||| |||||||||| ||||||||||| |||||  |||||||    
T  10579715 gtcccttaacttattttttggtttcgatttggtcccttaactattaaaagtttcgttttggtc 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 37624689 - 37624611
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||||||||||||| ||| ||    |||||||  ||||||| ||||||  ||||||||||||||||||    
T  37624689 cttaatacatcatttagtcccttaatttaattatttttttcaaaatggtcccttaactaaaaaacgtttcaatttggtc 37624611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 40135444 - 40135382
Alignment:
Q  30 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 92  Q
    ||||||||||||||||||||| || ||||| |||||||| |||||| | ||| || |||||||    
T  40135444 tttagtcccttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaattt 40135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 40187891 - 40187941
Alignment:
Q  287 ttctttcaaaatttatcttttcaacttcaacaaaaagcacaaaatcaaaca 337  Q
    ||||||||||| ||||| |||||||||||||||||| |||| ||| |||||    
T  40187891 ttctttcaaaaattatcatttcaacttcaacaaaaaccacataattaaaca 40187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 49801877 - 49801919
Alignment:
Q  196 atgtatcaccaacatctaattattttaattttcttcatcttct 238  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||    
T  49801877 atgtaccaccaacatctaatttttttcattttcttcatcttct 49801919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 50679924 - 50679862
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| |||||| | ||||||||| ||||||| ||  || |||||||||||    
T  50679924 gtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtc 50679862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 38458099 - 38458140
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaact 75  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  38458099 gtcccttaacttatttttggatttcaatttggtcccctaact 38458140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 9123502 - 9123442
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 94  Q
    |||||||||||||||||| | ||| | ||||||||| ||||||| ||  ||||||||||||    
T  9123502 gtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttgg 9123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 9633773 - 9633849
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    |||||| || |||| |||| ||||||||||||  ||||||| ||||||||| ||||||| ||  || ||||||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggt 9633849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 47533791 - 47533725
Alignment:
Q  197 tgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttcatca 265  Q
    ||||||||||||| ||||||  |||| ||| |||||||||||||| |||||||||| || |||||||||    
T  47533791 tgtatcaccaacacctaatttatttacttt-cttcatcttcttccatcatcttcat-catccttcatca 47533725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 7e-68; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 4974168 - 4973913
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| || | |||||||||||||||| || |||||  ||||||||||||||||| ||    
T  4974168 cttaatagatcatttagtcccttaatttattttcaattttcaatttgatctcttaactattaaacgttttaaattggttctttatcttctttccatcgtt 4974069  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatt 216  Q
    ||||||||||||||||||| ||||||||| | |       ||||| ||||||||| ||||||||||||| |||||||| ||||||||| |||  | | ||    
T  4974068 caatttggtccaattttattcattttaacccccaagaaaaggagaccgttggatagatgagatctatcagatctaactgtgtatcaccgacacatgattt 4973969  T
Q  217 attttaattttcttcatcttcttccttcatcttcatacaaccttcatcaatcttca 272  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  4973968 attttacttttcttcatcttctttcctcatcttcatacaaccttcatcaatcttca 4973913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 265
Target Start/End: Complemental strand, 22794441 - 22794195
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcat 116  Q
    |||||||| ||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||| || ||||||||| ||||||| |    
T  22794441 acttaatacatcgtttggtcccttaacttattt-ctgttttcaatttggtcccctaactattaaacgttccaaattgttcctttatcttccttccatcct 22794343  T
Q  117 tcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 216  Q
    |||||||||||| ||||||| ||||||||| | |       ||||||||||||||||||||| ||||||| |||||| | |||||||||||||||| |||    
T  22794342 tcaatttggtcctattttattcattttaacccccaaaaaaaggagatcgttggataaatgaggtctatcagatctaattgtgtatcaccaacatctgatt 22794243  T
Q  217 attttaattttcttcatcttcttccttcatcttcatacaaccttcatca 265  Q
      |||  |||||||||||||||||| |||||||||| ||| ||||||||    
T  22794242 tattttcttttcttcatcttcttccctcatcttcat-caatcttcatca 22794195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 34 - 272
Target Start/End: Original strand, 29657002 - 29657248
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||| |||||| ||| |||||||||||||||| ||| ||||    
T  29657002 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgttcaaaattggtcctttatcatctctccatcattcaatttgatcctattt 29657101  T
Q  134 tatccattttaacactc-nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttc 231  Q
    |||  |||||||| | |         |||| |||||||||||||||| |||||| |||||||| ||||||||||||| || |||||||||| ||||||||    
T  29657102 tattaattttaacccccaaaaacaacgagaccgttggataaatgagaactatcagatctaactgtgtatcaccaacacctgaattattttacttttcttc 29657201  T
Q  232 atcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    |||||||||      |||||| |||||||||||||||||||||||||    
T  29657202 atcttcttctctcatcttcatattcatacaaccttcatcaatcttca 29657248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 4973510 - 4973702
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||  || |||||  |||||||||||| |||| ||    
T  4973510 cttaatacattatttagtcccttaacttattttcagttttcaatttggtcctttaactattaaacgttctaaattggttctttatcttcttttcatcgtt 4973609  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacat 210  Q
    ||||||||||| ||||||| ||||| ||| |||        |||| ||||||||| ||||| ||||||| |||||||| ||||||||||||||    
T  4973610 caatttggtcctattttattcatttgaaccctcaagaaaatgagaccgttggatagatgaggtctatcatatctaactgtgtatcaccaacat 4973702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 32894908 - 32894721
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttgg 125  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||| |||| || |||||| ||||||||||| |||||||| |||||||    
T  32894908 atcatttggtcccttaacttattttcaattttcaatttgatcctctaactattaaaagttttaaattggtcatttatcttcttcccatcattaaatttgg 32894809  T
Q  126 tccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatct-aactatgtatcaccaacatct 212  Q
    ||| ||||||| ||||| ||| |||       | ||| ||||||||||||||||||||||| || | || | ||||||||||||||||    
T  32894808 tcctattttattcatttaaaccctcaagaaaagaagaccgttggataaatgagatctatcagatttaaagtgtgtatcaccaacatct 32894721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 29658732 - 29658475
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| |||  |||||||||||| |||||||||||| |||| |||||||||||||| || || |||||| |||||||||||| |||||||    
T  29658732 cttaatacatcatttggtcatttaacttatttttagttttcaatttagtcctctaactattaaacggtttaaattggtcctttatcttcttttcatcatt 29658633  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatta 217  Q
    | ||||| ||| ||||||| ||||||||| | |       ||||| | |||||||||| || ||||||| |||||| | |||| |||||||  || |||     
T  29658632 ctatttgatcctattttattcattttaac-ccccaaaaaaggagaccattggataaataaggtctatcagatctaattgtgtaccaccaacgcctgattt 29658534  T
Q  218 ttttaattttcttcatcttctt------ccttcatcttcatacaaccttcatcaatctt 270  Q
     ||| | |||||||||||||||       |||||||||||||||||||||| |||||||    
T  29658533 attttactttcttcatcttctttcctcgtcttcatcttcatacaaccttcaccaatctt 29658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 209
Target Start/End: Original strand, 32893470 - 32893645
Alignment:
Q  35 tcccttaacttatttt-cagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 133  Q
    |||||||||||||||| ||||||| ||||||||| | |||||| ||||||||  || ||| || ||||||||||||||||||||||||||||||  ||||    
T  32893470 tcccttaacttatttttcagtttttaatttggtctcttaactagtaaacgttctaaattgatcctttatcttctttccatcattcaatttggtcttattt 32893569  T
Q  134 tatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 209  Q
    ||| ||||||||| | |       ||||| |||||||||| || | ||||||| |||||||| |||||||||||||    
T  32893570 tattcattttaacccccaagaaaaggagaccgttggataagtgtggtctatcagatctaactgtgtatcaccaaca 32893645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 166 - 264
Target Start/End: Complemental strand, 46203625 - 46203526
Alignment:
Q  166 ttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatta-ttttaattttcttcatcttcttccttcatcttcatacaaccttcatc 264  Q
    ||||||||| ||||||||| |||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||    
T  46203625 ttggataaaagagatctataaaatctaacggtgtatcaccaacatctaattaattttaattttattcatcttcttccttcatcttcatctaaccttcatc 46203526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 22061914 - 22061836
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||||    
T  22061914 cttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtc 22061836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 43930315 - 43930394
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||||||| |||||||||||||||||   |||||| |||||||||||||||||||||||| |||||||||||    
T  43930315 acttaatatatcatttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtc 43930394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 43006382 - 43006460
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||  || |||||||||||    
T  43006382 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtc 43006460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 4858463 - 4858385
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||| |||||||||||| ||| || |||||||||||    
T  4858463 cttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtc 4858385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 25153655 - 25153733
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||  || |||||||||||    
T  25153655 cttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtc 25153733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 40926638 - 40926560
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  40926638 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 40926560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 29409217 - 29409098
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttc-----cttcatcttcat 252  Q
    ||||| ||||||||||||||||||||||| |||||||  ||||| ||||||| ||||||  |||| | || ||||||||||||     ||||||||||||    
T  29409217 ggagaccgttggataaatgagatctatcagatctaacagtgtataaccaacacctaatttatttactattattcatcttcttcctcatcttcatcttcat 29409118  T
Q  253 acaaccttcatcaatcttca 272  Q
    | |||  |||||||||||||    
T  29409117 aaaactatcatcaatcttca 29409098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 36395957 - 36396071
Alignment:
Q  165 gttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttc------cttcatcttcatacaac 257  Q
    |||||||||| |||||| |||| || ||||  |||||||||||||||||| ||||| || |||||||||||||||||      |||||||| ||||||||    
T  36395957 gttggataaaggagatccatcagatttaacagtgtatcaccaacatctaatttattatacttttcttcatcttcttcccacatcttcatctacatacaac 36396056  T
Q  258 cttcatcaatcttca 272  Q
     ||||||||||||||    
T  36396057 attcatcaatcttca 36396071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 22744743 - 22744821
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||| ||||||||||||| ||  ||||||||||||||    
T  22744743 cttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtc 22744821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 47536971 - 47536747
Alignment:
Q  16 cacttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttc-tttccatc 114  Q
    ||||||||| ||| ||| ||||||||||||| ||    ||||| | |||||||||||||||||||||  || || |||||| ||||||||  |||  |||    
T  47536971 cacttaatacatcgtttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacactttaaattggtcctttatctttgtttttatc 47536872  T
Q  115 attcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa 214  Q
    || ||||||||||| |||||||  |||||||   ||       | ||| ||||||||||| ||| ||||||| ||||||   ||||||||||||| ||||    
T  47536871 at-caatttggtcctattttattgattttaaacttctcaaaaagaagaccgttggataaaagaggtctatcagatctaatggtgtatcaccaacacctaa 47536773  T
Q  215 ttattttaattttcttcatcttcttcc 241  Q
    |||| || | |||||||||||||||||    
T  47536772 ttatatt-actttcttcatcttcttcc 47536747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 7146799 - 7146855
Alignment:
Q  40 taacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||| ||||||||||||||||||||||||| ||  ||||||||||||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtc 7146855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 23153706 - 23153662
Alignment:
Q  61 tttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  23153706 tttggtcccctaactattaaacgtttcaatttggtcatttatctt 23153662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 47535692 - 47535783
Alignment:
Q  54 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 145  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||| || |||  |||| |||||||||||| |||||||  |||||||    
T  47535692 ttttcaaattagtcccctaactattaaacgtttcaatttggtcctttatctttgtttttatca-tcaatttggtcctattttattaattttaa 47535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 16955689 - 16955776
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||| |||||| | ||||||||||||| ||    ||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  16955689 cttaattgatcatctggtcccttaacttaattctttttttcaaattggttccctagctattaaacgtttcaatttggtcatttatctt 16955776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 17287083 - 17287149
Alignment:
Q  30 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 96  Q
    ||||||||||||||||||| | || ||||||||||||||||||||| |||||| ||||||||||||||    
T  17287083 tttagtcccttaacttattattagatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 17287149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 19279732 - 19279653
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||| ||| |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  19279732 acttaatacatcgtttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 19279653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 43704571 - 43704484
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||| |||||||| ||||||||||||| ||    ||||| | ||||||||||||||||||||||||||||  ||||| ||||||||    
T  43704571 cttaattgatcatttggtcccttaacttaattatttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctt 43704484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 7148161 - 7148099
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| |||||||||||||||  |||||||| ||  ||||||||||||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtc 7148099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 33459662 - 33459584
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||||||||| |||||||||||  ||||||| |||||||| |||||||| ||  || |||||||||||    
T  33459662 cttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtc 33459584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 41126252 - 41126314
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||  || |||||||||||    
T  41126252 gtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtc 41126314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 44114774 - 44114720
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtccccta 72  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  44114774 cttaatacatcatttggtcccttaacttatttttagttttcattttggtccccta 44114720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 47537143 - 47537081
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||| ||||||||||||||    
T  47537143 gtcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtc 47537081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 4857200 - 4857276
Alignment:
Q  20 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||| |||||||  ||||||||||||||||  ||||||| ||||||||||||||||| ||| || || ||||||||    
T  4857200 taatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtc 4857276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 4973889 - 4973829
Alignment:
Q  287 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||||||||||| || ||| ||||||||| |||||||| |||||||||||||||||||||||    
T  4973889 ttctttcaaaaattcatcatttcaacttgaacaaaaaccacaaaatcaaacatttaaattt 4973829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 18802509 - 18802449
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||| ||||||| |||||||||||||||||  ||||||| |||| ||||||||||||    
T  18802509 acttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactat 18802449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 265
Target Start/End: Complemental strand, 19218960 - 19218853
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcatacaa 256  Q
    ||||| ||||||||||| ||| || || | || ||||  ||||||||||||| |||||| |||||| | |||||||||||| || |||||||||||||||    
T  19218960 ggagaccgttggataaaagaggtccatgagatttaacagtgtatcaccaacacctaatttattttattcttcttcatcttcatc-ttcatcttcatacaa 19218862  T
Q  257 ccttcatca 265  Q
    | |||||||    
T  19218861 cattcatca 19218853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 30224096 - 30224017
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||  ||| |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  30224096 acttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtc 30224017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 35128282 - 35128231
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcc 68  Q
    |||||||| ||||||| |||||||||||||||||  ||||||||||||||||    
T  35128282 acttaatacatcatttggtcccttaacttatttttggttttcaatttggtcc 35128231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 36585024 - 36584937
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||| |||||||| ||||||||||||| ||    ||||| | ||||||||||||||||||||| ||||||  ||||| ||||||||    
T  36585024 cttaattgatcatttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacatttcaaaatggtcctttatctt 36584937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 45398665 - 45398783
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttcct-----tcatcttcat 252  Q
    ||||||| ||||||||  ||| | |||||||||| |   ||||||||||||||||||||  |||| ||| |||||||||||||||     ||||||||||    
T  45398665 ggagatcattggataagggaggtttatcaaatcttatagtgtatcaccaacatctaatttatttacttt-cttcatcttcttcctcatcttcatcttcat 45398763  T
Q  253 acaaccttcatcaatcttca 272  Q
      ||||||||||||||||||    
T  45398764 ttaaccttcatcaatcttca 45398783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 25155054 - 25154996
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||| ||||||| |||||||||||||||||  |||||||||||| |||| |||||||    
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactat 25154996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 33070645 - 33070683
Alignment:
Q  61 tttggtcccctaactattaaacgtttcaatttggtcttt 99  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  33070645 tttggtcccttaactattaaacgtttcaatttggtcttt 33070683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 36673939 - 36673877
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||| || |||||||||||    
T  36673939 gtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtc 36673877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 40881104 - 40881166
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| | ||||||| |||||||||| |||||||||||||||    
T  40881104 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtc 40881166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 41616637 - 41616699
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  41616637 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 41616699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 43931985 - 43931907
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| || |||||| |||||||   |||||| | |||||| ||||||||||||||| |||||||||||    
T  43931985 cttaatacatcatttggttccttaatttattttttattttcactctggtcctctaactattaaacgtatcaatttggtc 43931907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 45721866 - 45721808
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||  || ||||||||||    
T  45721866 ccttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggt 45721808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 14206687 - 14206748
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| |||||||  ||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  14206687 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtc 14206748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 14215377 - 14215438
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| |||||||  ||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  14215377 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtc 14215438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 22060460 - 22060537
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    ||||||| ||||||| ||| |||||||||||||  ||||| |||||||||| |||||||| ||  || ||||||||||    
T  22060460 cttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggt 22060537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 22746438 - 22746361
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| || |||| |||| ||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||    
T  22746438 ttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtc 22746361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 23350926 - 23350995
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  |||||||    
T  23350926 tcatttagtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtc 23350995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 22794169 - 22794117
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  22794169 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 22794117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 29657270 - 29657330
Alignment:
Q  287 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||||||||||| || ||| |||||||||||||||||  || ||||||||||||||||||||    
T  29657270 ttctttcaaaaattcatcatttcaacttcaacaaaatccaaaaaatcaaacatttaaattt 29657330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 34558421 - 34558361
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||| ||  ||| |||||||||||||||||| | ||||| |||||||||||||||||    
T  34558421 acttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactat 34558361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 14109180 - 14109129
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||| |||||||    
T  14109180 atcatttggtcccttaacttatttttaattttcactttggtcccttaactat 14109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 14419137 - 14419086
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||| |||||||    
T  14419137 atcatttggtcccttaacttatttttaattttcactttggtcccttaactat 14419086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 38002613 - 38002546
Alignment:
Q  38 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||||||||||||| ||||| ||||||||| ||||||| ||  || |||||||||||  |||||||    
T  38002613 cttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtcccttatctt 38002546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 41127273 - 41127206
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    ||||||||||||||||| | ||||| ||||||||||||||||| ||   | ||||||||||| |||||    
T  41127273 tcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcctttat 41127206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 46196897 - 46196940
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||    
T  46196897 ttggtcccctaactattaaatgttttaatttggtcgtttatctt 46196940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 46203725 - 46203686
Alignment:
Q  66 tcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  46203725 tcccctaactattaaacgttttaatttagtcttttatctt 46203686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 46675053 - 46674994
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||  ||||||||||||||||  |||||||||||| |||| |||||||    
T  46675053 cttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactat 46674994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 2904150 - 2904092
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 92  Q
    ||||||||| |||||||||  ||||| ||||||||||||||||| ||| || |||||||    
T  2904150 gtcccttaatttattttcaaatttcattttggtcccctaactataaaatgtctcaattt 2904092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 17288323 - 17288261
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  ||||| | ||||||||||||||||| ||  || |||||||||||    
T  17288323 gtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtc 17288261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 19069992 - 19069930
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||| ||||||||| |||||||| || |||||| |||||||    
T  19069992 gtcccttaacttattttttggtttcattttggtcccttaactattgaaagtttcattttggtc 19069930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 19278350 - 19278428
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||| ||| ||  || |||||||||||    
T  19278350 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtc 19278428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 21171589 - 21171527
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||||||||||||||||||| | ||  || |||||||||||    
T  21171589 gtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtc 21171527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 29344177 - 29344239
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||  ||| |||||||||||||||| |||||||||    
T  29344177 gtcccttaacttattttaatttctcagtttgaccccttaactattaaacgttttaatttggtc 29344239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 38001517 - 38001579
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||||   ||||| |||||||| |||||||| ||  ||||||||||||||    
T  38001517 gtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtc 38001579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 40930415 - 40930493
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| |||  |||||| | |||||||  ||||||| ||||||||||||||||| ||  ||||||||||||||    
T  40930415 cttaatacatcgtttgatcccttgatttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtc 40930493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 41516462 - 41516404
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||| ||||||| ||| |||||||||||||  ||||| | |||||||||||||||||    
T  41516462 ttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactat 41516404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 43007768 - 43007690
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||| | ||||||||||   ||||||||||||||| |||||||| ||  || |||||||||||    
T  43007768 cttaatatatcatttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtc 43007690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 46457067 - 46457145
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| || ||||||||||||||  |||||||||||| |||| ||||||| ||  || |||||||||||    
T  46457067 cttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtc 46457145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 346
Target Start/End: Original strand, 32893724 - 32893769
Alignment:
Q  301 atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||| |||||||||||||||||| ||||||||| || ||||||||||    
T  32893724 atcatttcaacttcaacaaaaaccacaaaatcgaaaatttaaattt 32893769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 46673512 - 46673565
Alignment:
Q  43 cttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||  |||||||||||||||||||||| || ||  ||||||||||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtc 46673565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 16957473 - 16957441
Alignment:
Q  70 ctaactattaaacgtttcaatttggtcttttat 102  Q
    ||||||||||||||||||||||||||| |||||    
T  16957473 ctaactattaaacgtttcaatttggtcctttat 16957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 19105639 - 19105587
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgttt 86  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| ||||    
T  19105639 gtcccttaacttattttttgatttcattttggtcccttaactattaaaagttt 19105587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 29408391 - 29408439
Alignment:
Q  166 ttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa 214  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||| ||||    
T  29408391 ttggataaatgaggtctatcagatctaacggtgtatcaccaacacctaa 29408439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 42520227 - 42520290
Alignment:
Q  25 gatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaa 89  Q
    |||||||| ||||||||||||| |||   ||||| | |||||||||||| |||||||||||||||    
T  42520227 gatcatttggtcccttaacttaattttt-ttttcgaattggtcccctaaatattaaacgtttcaa 42520290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 43935181 - 43935261
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    |||||||| ||  ||| |||||||||||||||||  | ||||| |||||||| |||||||| ||  || ||||||||||||    
T  43935181 acttaatatatgctttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtct 43935261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 3e-64; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 14358000 - 14357740
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 118  Q
    |||||| || |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||| | |||| |||||||||||||||||||||    
T  14358000 ttaatatattatttggtcctttaacttattttcagtttttaatttggtcccctaactattaaacgctccaaatcggtcatttatcttctttccatcattc 14357901  T
Q  119 aatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatta 217  Q
    |||||||||| |||||||  |||||||| | |       ||||| ||||||||||||||||||||||| |||||||| ||||||||||||| || |||||    
T  14357900 aatttggtcctattttattaattttaacccccaaaaaaaggagaccgttggataaatgagatctatcatatctaactgtgtatcaccaacacctgaatta 14357801  T
Q  218 ttttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    ||||| |||||||||||||||||      |||||| |||||||||||||||||||||||||    
T  14357800 ttttacttttcttcatcttcttccctcatcttcatattcatacaaccttcatcaatcttca 14357740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 30916237 - 30915976
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||  ||  ||||||||||||||||||||||||||    
T  30916237 cttaatacatcatttggtcccttaacttattttatgttttcaatttagtcccctaactattaaacgttctaaagtggtcttttatcttctttccatcatt 30916138  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatt 216  Q
    ||||||||||  |||| || |||||||||   |       ||||| | |||||||||| || ||||||| |||||||| ||||| ||||||| || | ||    
T  30916137 caatttggtcatatttcattcattttaacctccaaaaaaaggagaccattggataaattaggtctatcagatctaactgtgtattaccaacacctgattt 30916038  T
Q  217 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    |||||| |||||||||||||||||      |||||||||||||| |||||||||||||||||    
T  30916037 attttacttttcttcatcttcttccctcatcttcatcttcatactaccttcatcaatcttca 30915976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 33362685 - 33362451
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 118  Q
    |||||| ||||||| |||||||||||||||||  ||||| |||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  33362685 ttaatatatcatttggtcccttaacttattttttgtttttaatttggtcctctaactattaaac-tttcaaattggtcctttatcttctttccatcattc 33362587  T
Q  119 aatttggtccaattttatccattttaacactc--nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatc-taat 215  Q
    |||||||||| |||| || ||||||||| |||         ||||| | ||||||||||||| ||||||| |||||||| ||||||||||| | | || |    
T  33362586 aatttggtcctatttcattcattttaac-ctcaaaaaaaaaggagaccattggataaatgaggtctatcagatctaactgtgtatcaccaataccttatt 33362488  T
Q  216 tattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  33362487 tattttacttttcttcatcttcttccctcatcttcat 33362451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 37 - 252
Target Start/End: Original strand, 14356448 - 14356662
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttat 136  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||  || |||||| ||||||||||||||||||||||||||| ||| |||||||    
T  14356448 ccttaacttattttcagttttcaatttggtcctctaactattaaatgttctaaattggtcgtttatcttctttccatcattcaatttgatcctattttat 14356547  T
Q  137 ccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatctt 236  Q
     ||||||||| |          |||| | |||||| |||||| ||||||| |||||| | ||||||||||||| || |||  ||| | ||||||||||||    
T  14356548 tcattttaactc-aaaaaaaaagagaccattggatgaatgaggtctatcacatctaattgtgtatcaccaacacctgatttattttactttcttcatctt 14356646  T
Q  237 cttccttcatcttcat 252  Q
    ||| | ||||||||||    
T  14356647 ctttcctcatcttcat 14356662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 30912311 - 30912426
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| || ||||||||||||||| ||||||||||| |||| |||||||||||||||| |||  | ||| |||||||||||| |||||||    
T  30912311 cttaatacatcatttggttccttaacttattttctgttttcaatttagtcctctaactattaaacgttccaaagtagtcctttatcttctttacatcatt 30912410  T
Q  118 caatttggtccaattt 133  Q
    ||||||||||| ||||    
T  30912411 caatttggtcctattt 30912426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 42962020 - 42962242
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcat 116  Q
    ||||||| ||| ||| ||||||||||||| ||    ||||| | |||||||||||||||||||||| || || |||||| |||||| || ||| |||||     
T  42962020 cttaatacatcgttttgtcccttaacttaattctttttttcgaattggtcccctaactattaaacgctttaaattggtcctttatctttgttttcatca- 42962118  T
Q  117 tcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 216  Q
    |||||||||||| |||||||  |||||||  |||       | ||| ||||||||||| ||| ||||| | ||||||   ||||||||||||| ||||||    
T  42962119 tcaatttggtcctattttattaattttaaacctctcaaaaagaagaccgttggataaaggaggtctataagatctaatggtgtatcaccaacacctaatt 42962218  T
Q  217 attttaattttcttcatcttcttcc 241  Q
    || || | |||||||||||||||||    
T  42962219 atatt-actttcttcatcttcttcc 42962242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 12936221 - 12936143
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  12936221 cttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 12936143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 9038502 - 9038573
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 133  Q
    |||||||| ||| |||||||| ||||||||| |||||||||||| ||||||| |||||||||||||| ||||    
T  9038502 ttggtcccttaattattaaacatttcaatttagtcttttatcttgtttccataattcaatttggtcctattt 9038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 19523980 - 19524059
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||| ||||||| ||  || ||||||||||||    
T  19523980 cttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtct 19524059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 19525407 - 19525348
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  19525407 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 19525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 12950379 - 12950301
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||||||||||||||||||||   ||||||| ||||||||||||||||| ||  || |||||||||||    
T  12950379 cttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtc 12950301  T

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Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 39134680 - 39134741
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    ||||||||||||||||| | || ||| ||||||||| |||||||||||||||||||||||||    
T  39134680 gtcccttaacttattttaaattctcagtttggtcccttaactattaaacgtttcaatttggt 39134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 19825871 - 19825955
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||  |||||| ||||  ||||| |||||    
T  19825871 cttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactaaaaaacgtctcaaactggtcctttat 19825955  T

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Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 27894143 - 27894063
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    |||||||| ||| ||| ||| |||||||||||||  ||||||| ||||||||||||||||| ||  |||||||||||||||    
T  27894143 acttaatacatcgtttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtct 27894063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 12933748 - 12933807
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactat 12933807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 41905172 - 41905231
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  41905172 cttaatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactat 41905231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 42963298 - 42963247
Alignment:
Q  54 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  42963298 ttttcaaattggtcctctaactattaaacgtttcaatttggtcatttatctt 42963247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 224708 - 224630
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    |||||| ||||| | |||||||||||||||||  ||||||| ||||||||||||||||| ||  || ||||||||||||    
T  224708 ttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtct 224630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 8762519 - 8762441
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| ||||||||||||||||| | |||||||||||||||| | ||||| ||| || |||||||||||    
T  8762519 cttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtc 8762441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 11907264 - 11907202
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||| ||||||||||||||    
T  11907264 gtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtc 11907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 18677973 - 18678051
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||| |||||||||||| ||  || |||||||||||    
T  18677973 cttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtc 18678051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 19827259 - 19827181
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||||||| |||||||||||||  ||||||||||||||||| ||| ||| ||  || |||||||||||    
T  19827259 cttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtc 19827181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 14357712 - 14357660
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||| ||| |||||||||||||||||  |||||||||||||||||||||||    
T  14357712 aaaattcatcatttcaacttcaacaaaattcacaaaatcaaacatttaaattt 14357660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 30915642 - 30915714
Alignment:
Q  166 ttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatcttc 237  Q
    ||||||| ||||| ||||||| |||||||| ||||||||||||| || | |||||||| ||||||||||||||    
T  30915642 ttggatatatgaggtctatcagatctaactgtgtatcaccaacacctgatttattttacttttcttcatcttc 30915714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 328273 - 328214
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||  || |||||||||||||  |||||||||||||||||||||||||    
T  328273 cttaatacatcatttgatcacttaacttattttttgttttcaatttggtcccctaactat 328214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 1273085 - 1273164
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||||||| ||||||||| |||||||  ||||||| ||||||||  ||||||| ||| || |||||||||||    
T  1273085 acttaatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtc 1273164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 6629728 - 6629787
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| ||||||||||||||||   ||||||| |||||||||||||||||    
T  6629728 cttaatacatcatttggtcccttaacttatttgtggttttcactttggtcccctaactat 6629787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 12947909 - 12947968
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||||||||||||||||||||   |||||| |||| ||||||||||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattttgatcccctaactat 12947968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 4568077 - 4568015
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  4568077 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 4568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 5382939 - 5383017
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  |||||| |||||||| ||||| ||| ||  || |||||||||||    
T  5382939 cttaatacatcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtc 5383017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 23679160 - 23679218
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 92  Q
    |||||| || ||||||| | |||||| ||||||||| ||||||||||||||||||||||    
T  23679160 gtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaattt 23679218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 23855652 - 23855594
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 92  Q
    |||||| || ||||||| | |||||| ||||||||| ||||||||||||||||||||||    
T  23855652 gtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaattt 23855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 30673457 - 30673578
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttc------cttcatcttc 250  Q
    ||||| ||||||||||| ||| | | | | || |||| |||||||||||||| |||||| |||| | ||||| |||||||||||      ||||||||||    
T  30673457 ggagaccgttggataaaggaggtttgtgagatttaaccatgtatcaccaacacctaatttatttcacttttcatcatcttcttccctcatcttcatcttc 30673556  T
Q  251 atacaaccttcatcaatcttca 272  Q
    |||||| |||||||||||||||    
T  30673557 atacaagcttcatcaatcttca 30673578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 40059447 - 40059385
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaa 80  Q
    ||||||| || |||| |||||||||||||||||  ||||||| |||| |||||||||||||||    
T  40059447 cttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaa 40059385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 20991751 - 20991690
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | ||||| ||||| ||||||||||| ||| || |||||||||||    
T  20991751 tcccttaacttattttcggatttcattttggccccctaactataaaatgtctcaatttggtc 20991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 30915765 - 30915817
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  30915765 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 30915817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 223223 - 223282
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagtttt-caatttggtcccctaactat 77  Q
    |||||| ||| ||| ||||||||||||||||| |||||| || |||||||||||||||||    
T  223223 ttaatatatcgttttgtcccttaacttatttttagttttccactttggtcccctaactat 223282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 19050762 - 19050824
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| || |||||||||||    
T  19050762 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtctcaatttggtc 19050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 20841894 - 20841827
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 101  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  ||||||| ||||    
T  20841894 gtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtccttta 20841827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 26403304 - 26403363
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||| |||||| ||||||||||||   |||||||||||||||| |||||||    
T  26403304 cttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactat 26403363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 30674809 - 30674714
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||| ||||| ||||| ||| ||| | | ||||||| |||||||||||||| |||| |||||| | ||| |||| ||||||||| ||||||||||    
T  30674809 ggagaccgttgaataaaggaggtctgtaagatctaaccatgtatcaccaacacctaatttatttcactttccttcctcttcttccctcatcttcat 30674714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 33362422 - 33362363
Alignment:
Q  287 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaatt 345  Q
    ||||||||||| || ||| |||||||||||||||||| |||| |||||||| ||||||||    
T  33362422 ttctttcaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatt 33362363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 36442238 - 36442305
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 101  Q
    |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||| ||||||| ||||    
T  36442238 gtcccttaacttattttttgctttcgttttggtcccttaactattaaaagtttcattttggtccttta 36442305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 1155982 - 1156044
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||| |||||||    
T  1155982 gtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtc 1156044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 5384465 - 5384387
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| || |||||| |||||||   ||||||||||| |||||||||||| ||  || |||||||||||    
T  5384465 cttaatacatcatttggttccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtc 5384387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 10570423 - 10570361
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  |||||||    
T  10570423 gtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtc 10570361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 15509208 - 15509270
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||    
T  15509208 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 15509270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 15510366 - 15510304
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| |||| |||||||||||| ||  || |||||||||||    
T  15510366 gtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtc 15510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 21387650 - 21387712
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||    ||||| ||||||||||||||||| ||| || |||||||||||    
T  21387650 gtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtc 21387712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 24070418 - 24070480
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||| ||||||| | || ||| | || |||| ||||||||||||||||||||||||||    
T  24070418 gtcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtc 24070480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 39135767 - 39135689
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||| |   |||| |||||||||||| | || ||| |||| |||| ||||||||||| ||||||||||||||    
T  39135767 cttaatagatcctccggtcctttaacttattttaatttctcagtttgctcccttaactattaaatgtttcaatttggtc 39135689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 42382213 - 42382151
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | |||| |||||||||| ||||||||||| |||||  |||||||    
T  42382213 gtcccttaacttattttttggtttcgatttggtcccttaactattaaaagtttcgttttggtc 42382151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 22650726 - 22650669
Alignment:
Q  39 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  22650726 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 22650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 24071545 - 24071484
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||| | |||||| ||| || || ||| ||||||| ||||||||||||||    
T  24071545 tcccttaacttattttaatttttcagtttagttccttaattattaaatgtttcaatttggtc 24071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 641976 - 641921
Alignment:
Q  41 aacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 96  Q
    |||||||||| || ||||||||||||||||||||| |||||| || |||||||||||    
T  641976 aacttatttttagatttcaatttggtcccctaact-ttaaactgtctcaatttggtc 641921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 1273459 - 1273383
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 94  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||| ||||||||| ||| ||| ||  || |||||||||    
T  1273459 cttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 1663184 - 1663216
Alignment:
Q  18 cttaatagatcatttagtcccttaacttatttt 50  Q
    ||||||| |||||||||||||||||||||||||    
T  1663184 cttaatacatcatttagtcccttaacttatttt 1663216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 4032002 - 4032058
Alignment:
Q  197 tgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||||||||||| |||||| || || | ||||||| ||||||||||||||||||||    
T  4032002 tgtatcaccaacacctaatttatatttactttcttcttcttcttccttcatcttcat 4032058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 20988703 - 20988771
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || ||||||| |||| ||||    
T  20988703 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctcttat 20988771  T

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Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 11081151 - 11080890
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| |||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  11081151 cttaatacatcatttgatcccttaacttattttctgttttcaatttggtcctctaactattaaacgttccaaattggtcctttatcttctttccatcatt 11081052  T
Q  118 caatttggtccaattttatccattttaacactc-nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aat 215  Q
    ||||||||||| |||| || ||||||||| |||        ||||| | ||||||||||||| ||||||| |||||||| ||||||||||||| || | |    
T  11081051 caatttggtcctatttcattcattttaac-ctcaaaaaaaaggagacctttggataaatgaggtctatcagatctaactgtgtatcaccaacacctgatt 11080953  T
Q  216 tattttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    ||||||| |||||||||||||||||      ||||||||||||||||||||||||||||||||    
T  11080952 tattttacttttcttcatcttcttccctcatcttcatcttcatacaaccttcatcaatcttca 11080890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 38 - 237
Target Start/End: Original strand, 42307513 - 42307712
Alignment:
Q  38 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatc 137  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||| || ||| |||||||||||||||||||| ||||| | || |||||||     
T  42307513 cttaacttattttctgttttcaatttggtcccctaactattaaatatttcaaattagtcatttatcttctttccatcatttaatttagacctattttatt 42307612  T
Q  138 cattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatctt 236  Q
    ||||||||  | |        |||||| |||||||||| || ||||||| |||||| | |||||||| ||||||| | ||||||||  ||||||||||||    
T  42307613 cattttaatccacaaaaaat-gagatcattggataaataaggtctatcatatctaattgtgtatcactaacatctgatttattttacctttcttcatctt 42307711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 42314934 - 42314809
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 118  Q
    |||||| |||||||  | |||||| ||||||||  ||||||||||| | |||||||||||||||||||||| |||||  |||||||||||||| ||||||    
T  42314934 ttaatacatcatttgattccttaatttattttctattttcaatttgattccctaactattaaacgtttcaaattggttctttatcttctttccttcattc 42314835  T
Q  119 aatttggtccaattttatccatttta 144  Q
    |||||||||  ||||||| |||||||    
T  42314834 aatttggtctcattttattcatttta 42314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 31623903 - 31623981
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||||    
T  31623903 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtc 31623981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 16346111 - 16346174
Alignment:
Q  33 agtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||||||||    
T  16346111 agtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtc 16346174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 36756061 - 36756139
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||||||||||||||||| |||||| ||||||||||| ||||||| ||  |||||||| |||||    
T  36756061 cttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtc 36756139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 37324798 - 37324728
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||| || ||||||||||||    
T  37324798 tcatttaatcccttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtct 37324728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 38591126 - 38591048
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||| ||  || |||||||||||    
T  38591126 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtc 38591048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 41868035 - 41867957
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||||||||| ||||||| |||||||| ||||||||||||||||| ||  || |||||||||||    
T  41868035 cttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtc 41867957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 43386821 - 43386743
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||| | |||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||||||    
T  43386821 cttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtc 43386743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36940152 - 36940075
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||| |||||||||||| ||  |||||||||||||    
T  36940152 cttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggt 36940075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 35462968 - 35462888
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttc 237  Q
    ||||||||||||||||||||| ||||||  |||||||  ||||||||||||| |||| |||||||| |||| |||||||||    
T  35462968 ggagatcgttggataaatgaggtctatctgatctaacagtgtatcaccaacacctaatttattttacttttattcatcttc 35462888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 38790372 - 38790296
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 94  Q
    ||||||| |||| ||  |||||||||||||||||  |||||| |||||| ||||||||||||||||| |||||||||    
T  38790372 cttaatacatcagttgatcccttaacttattttcgtttttcattttggttccctaactattaaacgtctcaatttgg 38790296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 39310 - 39244
Alignment:
Q  30 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 96  Q
    ||||||||||||||||||| | || ||||||||||||||||||||| |||||| ||||||||||||||    
T  39310 tttagtcccttaacttattattagatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 39244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 10053863 - 10053804
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||| |||||||    
T  10053863 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactat 10053804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 37323345 - 37323420
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    ||||||| ||||||| ||||||||| |||||||  |||||||||||||| |||||||||| ||| || ||||||||    
T  37323345 cttaatacatcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttg 37323420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 12818767 - 12818829
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||||| |||||||||||| |||||||||||||    
T  12818767 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacatttcaatttggtc 12818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 20066216 - 20066310
Alignment:
Q  159 gagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 252  Q
    |||| ||||||||||| |||||| |||| || ||||  ||||||||||||| |||| ||||| || ||||||||||||||||||  |||||||||    
T  20066216 gagaccgttggataaaagagatccatcagatttaacagtgtatcaccaacacctaatttattctacttttcttcatcttcttcccacatcttcat 20066310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 43278040 - 43277962
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||  ||||||||||||||||   |||| ||||||||||||||||||| ||| || |||||||||||    
T  43278040 cttaatatatcatttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtc 43277962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 42307759 - 42307815
Alignment:
Q  290 tttcaaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||| |||||| ||| |||||||||||||||||| |||| ||||||||||||||||||    
T  42307759 tttaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacatttaaattt 42307815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 42314740 - 42314696
Alignment:
Q  215 ttattttaattttcttcatcttcttccttcatcttcatacaacct 259  Q
    |||||||| |||||||||||||||||| |||||||||||||||||    
T  42314740 ttattttacttttcttcatcttcttccctcatcttcatacaacct 42314696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 117045 - 117120
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    ||||||| ||| |||  ||||||||||||||||  ||||||| ||||||||||||| ||| ||| |||||||||||    
T  117045 cttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttg 117120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 162703 - 162640
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||||||||||||| || ||||  ||||||||| ||||||||||| |||||| ||||||||    
T  162703 gtcccttaacttatttttaggtttcgttttggtcccttaactattaaaagtttcattttggtct 162640  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 22914293 - 22914234
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    ||||||||||||||||| | |||||| |||| |||  |||||||||||||||||||||||    
T  22914293 gtcccttaacttattttaatttttcagtttgatccattaactattaaacgtttcaatttg 22914234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 36070175 - 36070234
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||  |||||||| |||||||  |||||||||||||||||||||||||    
T  36070175 cttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactat 36070234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 36071497 - 36071438
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||||||| |||||||||| ||  ||||||||||||||||| |||||||    
T  36071497 cttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactat 36071438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 38589818 - 38589876
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||||||| ||||||||    
T  38589818 cttaatacatcatttggtcccttaacttatttt-tgttttcaatttggtcctctaactat 38589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 43275747 - 43275806
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| ||| |||||||||||||  |||||||||||||| ||||||||||    
T  43275747 cttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactat 43275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 43414378 - 43414496
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatct-tctttccatcat 116  Q
    |||||| |||||||| ||||||||||||  ||    ||||| | ||||||||||||||||||||||||||||  ||||| ||||||| | ||| |||||     
T  43414378 cttaattgatcatttggtcccttaactttattctttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctatgttttcatca- 43414476  T
Q  117 tcaatttggtccaattttat 136  Q
    |||||||||| | |||||||    
T  43414477 tcaatttggtactattttat 43414496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 43416087 - 43416000
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||| ||||| || ||||||||||||| ||    ||||| | |||||||| |||||||||||||||||||  ||||||||||||||    
T  43416087 cttaattgatcaattggtcccttaacttaattctttttttcgaattggtcccttaactattaaacgtttcaaaatggtcttttatctt 43416000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 9189407 - 9189469
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||| ||||||| | || ||| | ||||||| ||||||||||||||||||||||||||    
T  9189407 gtcccttaatttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 9189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 24068343 - 24068405
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  24068343 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 24068405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 29739762 - 29739684
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||| ||||| |||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  29739762 cttaatacatcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtc 29739684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 37472400 - 37472478
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||| ||||||||||||  ||||| |||||||||| |||||||| ||  || |||||||||||    
T  37472400 cttaatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtc 37472478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 37474155 - 37474077
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||  |||||||||||||||   ||||||||||||||||| ||||||| ||  || |||||||||||    
T  37474155 cttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtc 37474077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 19913490 - 19913567
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| ||| ||| |||||||||||||||||    |||||||||||||| |||||||| ||  ||||||||||||||    
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtc 19913567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 11080868 - 11080808
Alignment:
Q  287 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||||||||||| || ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  11080868 ttctttcaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 11080808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 37982 - 38061
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||| ||| |||||||||||||||||  ||||| | ||| ||||||||||||| ||  |||| ||||||||||    
T  37982 cttaatacatcgtttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtct 38061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 4534046 - 4534109
Alignment:
Q  33 agtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | || ||| ||||||||  ||| ||||||| ||||||||||||||    
T  4534046 agtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtc 4534109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 9190542 - 9190483
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||| | || ||| ||| ||||| ||||||||||| ||||||||||||||    
T  9190542 ccttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtc 9190483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 16363931 - 16363872
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| || |||| |||||||||||||||||  ||||||| |||||||| ||||||||    
T  16363931 cttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactat 16363872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 346
Target Start/End: Original strand, 16497115 - 16497150
Alignment:
Q  311 cttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||||||||| |||||||||||||||||||||||    
T  16497115 cttcaacaaaaaccacaaaatcaaacatttaaattt 16497150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 31625484 - 31625425
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||  || |||||||||||    
T  31625484 ccttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtc 31625425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 39325950 - 39325875
Alignment:
Q  21 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| ||| ||| |||||||||||||||||| ||| ||| ||| ||||||||||||  |||||||| || ||||||    
T  39325950 aatatatcgtttggtcccttaacttattttctgttctcattttagtcccctaactaaaaaacgttttaaattggtc 39325875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 39544927 - 39544986
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| | ||||| | |||||||    
T  39544927 cttaatacatcatttggtcccttaacttattttctgttttcactctggtcgcttaactat 39544986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 42307703 - 42307734
Alignment:
Q  241 cttcatcttcatacaaccttcatcaatcttca 272  Q
    ||||||||||||||||||||||||||||||||    
T  42307703 cttcatcttcatacaaccttcatcaatcttca 42307734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 12818892 - 12818986
Alignment:
Q  160 agatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaatt-ttcttcatcttcttccttcatcttcat 252  Q
    ||| ||||||||||| ||| |  |||| |||||||| ||||||||||||| |||| |||||||| || | | |||||||||||||||||| ||||    
T  12818892 agaccgttggataaaggaggttcatcatatctaactctgtatcaccaacacctaatttattttacttatccatcatcttcttccttcatcatcat 12818986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 12820201 - 12820139
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| |||||||||| | || ||| || |||||| |||||||||||||||| |||||||||    
T  12820201 gtccctaaacttattttaatttctcagttcggtcccttaactattaaacgttttaatttggtc 12820139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 21524697 - 21524635
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||| |||||||    
T  21524697 gtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtc 21524635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 35945556 - 35945478
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| || |||| |||||||||||||||||  ||||||| ||| ||||| ||||||| ||| || ||| |||||||    
T  35945556 cttaatacattatttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtc 35945478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 39546796 - 39546718
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| || ||||||||||||||| ||||||| |||||| |||||||| | ||  || |||||||||||    
T  39546796 cttaatacatccttttgttccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtc 39546718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 41866891 - 41866969
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| | ||||| |||||||||||||||||   |||||| |||| |||| ||||||| ||  ||||||||||||||    
T  41866891 cttaatacaccatttggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtc 41866969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 3237759 - 3237702
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaact 75  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||| |||||||||||    
T  3237759 cttaatacatcatttggtcccttaacttatttttggatttcattttagtcccctaact 3237702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 6843769 - 6843830
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||    
T  6843769 tcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 6843830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 10398745 - 10398676
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||| | |||||||    
T  10398745 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagttttattttggtc 10398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 14820192 - 14820249
Alignment:
Q  20 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||| |||| || |||||||||||||||||  | ||| |||||||||||||||||||    
T  14820192 taatacatcaattggtcccttaacttatttttggattttaatttggtcccctaactat 14820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 7487507 - 7487447
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||| ||||||| |||| |||| |||||||  ||||||| |||| ||||||||||||    
T  7487507 acttaatacatcatttggtcctttaatttatttttcgttttcactttgatcccctaactat 7487447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 20066118 - 20066158
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||  ||||| ||||||||||||||||||||||||||    
T  20066118 ttggtcctataacttttaaacgtttcaatttggtcttttat 20066158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 36757306 - 36757270
Alignment:
Q  61 tttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  36757306 tttggtcccctaactataaaacgtctcaatttggtct 36757270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 39323784 - 39323868
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    ||||||| |||||||| |||||||||||||||||  || ||| ||| ||| ||||||||  |||||| |||| ||| ||| ||||    
T  39323784 cttaatatatcatttaatcccttaacttattttctattctcattttagtctcctaactaaaaaacgtctcaaattgatctcttat 39323868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 9e-58; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14206899 - 14206639
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| || |||| ||||||||| |||||||| ||||| |||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||    
T  14206899 cttaatacattatttggtcccttaatttattttctgtttttaatttggtcctctaactattaaacgttttaaattggtcatttatcttctttccatcatt 14206800  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 216  Q
    ||||||||||| ||||||| ||||||||||  |        |||| ||||||||||||||| ||||||| |||||||| ||||||||||| |||||| ||    
T  14206799 caatttggtcctattttattcattttaacatccataaaaatgaga-cgttggataaatgaggtctatcagatctaactgtgtatcaccaatatctaattt 14206701  T
Q  217 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    |||||| ||||||||||| |||||      |||||| |||||||||||||||||||||||||    
T  14206700 attttacttttcttcatcatcttccatcatcttcatgttcatacaaccttcatcaatcttca 14206639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14214647 - 14214387
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| || |||| ||||||||| |||||||| ||||| |||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||||    
T  14214647 cttaatacattatttggtcccttaatttattttctgtttttaatttggtcctctaactattaaacgttttaaattggtcatttatcttctttccatcatt 14214548  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 216  Q
    ||||||||||| ||||||| ||||||||||  |        |||| ||||||||||||||| ||||||| |||||||| ||||||||||| |||||| ||    
T  14214547 caatttggtcctattttattcattttaacatccataaaaatgaga-cgttggataaatgaggtctatcagatctaactgtgtatcaccaatatctaattt 14214449  T
Q  217 attttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    |||||| ||||||||||| |||||      |||||| |||||||||||||||||||||||||    
T  14214448 attttacttttcttcatcatcttccatcatcttcatgttcatacaaccttcatcaatcttca 14214387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 48338236 - 48337986
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  || |||||| ||||||||||||||||||||    
T  48338236 cttaatacatcatttggtcccttaacttattttcagttttcaatttggttccctgactattaaacgttctaaattggtcctttatcttctttccatcatt 48338137  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatta 217  Q
    ||||||||||| ||||||| |||||||||   |       ||||| || |||||| ||||| ||||||| |||||||| ||||||||||||| || |||     
T  48338136 caatttggtcctattttattcattttaaccaccaagaaaaggagaccgctggatatatgaggtctatcagatctaactgtgtatcaccaacacctgatt- 48338038  T
Q  218 ttttaattttcttcatcttcttccttcatcttcatacaaccttcatcaatcttca 272  Q
    | || |||||||||  | || | ||||||||||||||||||||||||||||||||    
T  48338037 tattcattttcttc--cctcat-cttcatcttcatacaaccttcatcaatcttca 48337986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 48336344 - 48336535
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| || ||||||||||||||||||||    
T  48336344 cttaatacatcatttgctcccttaacttattttcagttttcaatttggtcctctaactattaaacgttccaaattgatcatttatcttctttccatcatt 48336443  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 209  Q
    ||||||||||| ||||||| ||||||||| | |       ||||| ||||||||||||||| | ||| | |||||||| |||||||||||||    
T  48336444 caatttggtcctattttattcattttaacccccaagaaaaggagaccgttggataaatgaggtttattagatctaactgtgtatcaccaaca 48336535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 8895197 - 8895388
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggag 161  Q
    ||||||| ||||||| ||||||||||||||||||| ||| | || ||||| |||||||||||||||| |||| ||  |||||||| | |       ||||    
T  8895197 ttggtccactaactactaaacgtttcaatttggtcatttttattgtttccttcattcaatttggtcctatttcattaattttaaccccctaaaaaaggag 8895296  T
Q  162 atcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 252  Q
    ||| | |||||||| || ||||||| |||||||  |||||||||||||  ||||| |||||| ||||||||||||||||| |||||||||||    
T  8895297 atcatcggataaattaggtctatcagatctaaccgtgtatcaccaacacgtaatttattttacttttcttcatcttcttctttcatcttcat 8895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 14213145 - 14213259
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 133  Q
    ||||||||| |||||||| ||||||||||||||||||||||||| |||||||| || |||||| ||||||||| ||||||||||||||||| | | ||||    
T  14213145 gtcccttaatttattttctgttttcaatttggtcccctaactatcaaacgttttaaattggtcctttatcttccttccatcattcaatttgattctattt 14213244  T
Q  134 tatccattttaacac 148  Q
    |||  ||||||||||    
T  14213245 tatttattttaacac 14213259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 25583111 - 25583189
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||||||||||||||||||||   |||||| |||||||||||||||||||||||| |||||||||||    
T  25583111 cttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtc 25583189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 41387552 - 41387474
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||| || |||||||||||    
T  41387552 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtc 41387474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 53809612 - 53809533
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| ||||    
T  53809612 cttaatacatcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtct 53809533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 50719696 - 50719781
Alignment:
Q  62 ttggtcccctaactattaaac-gtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaac 146  Q
    |||||||  |||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| | |||||||| ||||||||    
T  50719696 ttggtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaatttggttctattttatcaattttaac 50719781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 50793152 - 50793067
Alignment:
Q  62 ttggtcccctaactattaaac-gtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaac 146  Q
    |||||||  |||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| | |||||||| ||||||||    
T  50793152 ttggtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaatttggttctattttatcaattttaac 50793067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 17350221 - 17350143
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  17350221 cttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtc 17350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 19579233 - 19579295
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||| || |||||||||||    
T  19579233 gtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtc 19579295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8371217 - 8371294
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    ||||||| |||||||  ||||||||||||||||  ||||||| ||||||||||||||||| ||| || ||||||||||    
T  8371217 cttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggt 8371294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 41386127 - 41386204
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || ||||||||||    
T  41386127 cttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggt 41386204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 45730650 - 45730710
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 94  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||||||    
T  45730650 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttgg 45730710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 42632703 - 42632762
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| ||||||||||||| |||  |||||||||||||||||||||||||    
T  42632703 cttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactat 42632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 42634005 - 42633946
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||   ||||||||||||||||||||||||    
T  42634005 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 42633946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 53808315 - 53808374
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||||||||| |||||||||    
T  53808315 cttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactat 53808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 5416211 - 5416273
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||| || |||||||||||    
T  5416211 gtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtc 5416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 8372735 - 8372657
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  8372735 cttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 8372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 10987772 - 10987694
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||  ||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  10987772 cttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtc 10987694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 26799025 - 26798947
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||| |||||||||||||  ||||| | ||||||||||||||||| ||| || |||||||||||    
T  26799025 cttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtc 26798947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 32980571 - 32980493
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||||||  ||  || |||||||||||    
T  32980571 cttaatatatcatttgatccattaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtc 32980493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 51825740 - 51825662
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  ||||||||||||||    
T  51825740 cttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtc 51825662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 54752613 - 54752691
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||| ||||||||||||| ||  || |||||||||||    
T  54752613 cttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtc 54752691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 39133015 - 39133092
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| |||||||  || |||||||||||||  ||||||||||||||||||||||||| ||  || |||||||||||    
T  39133015 ttaatacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 39133092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 52293626 - 52293558
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || ||||||||||| |||||    
T  52293626 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttat 52293558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 2764065 - 2763970
Alignment:
Q  158 ggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||| ||||||||||| ||||||| | | ||||||| ||||||||||||||  ||| |||||  | ||| |||||||||||||| ||||||||||    
T  2764065 ggagaccgttggataaaggagatctgtgagatctaaccatgtatcaccaacacttaatttattccactttccttcatcttcttccctcatcttcat 2763970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 21247233 - 21247304
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaa 89  Q
    |||||| |||||||| ||||||||||||| ||     |||||| ||||||||||||||||||||||||||||    
T  21247233 cttaattgatcatttggtcccttaacttaattctttatttcaaattggtcccctaactattaaacgtttcaa 21247304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 25585952 - 25585873
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| || |||| ||||||||| |||||||   |||||| | |||||| ||||||||||||||| ||||||||||||    
T  25585952 cttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtct 25585873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 1031829 - 1031891
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| | ||||||| ||||||||||| ||||||||||||||    
T  1031829 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaatttggtc 1031891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 32973152 - 32973214
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  32973152 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 32973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 32974326 - 32974264
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  32974326 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 32974264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 33000903 - 33000841
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||| ||||||||||| | || ||| |||| |||| ||||||||||||||||||||||||||    
T  33000903 gtcccctaacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtc 33000841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 36626728 - 36626806
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||| |||||||||||||  ||| |||||||||  ||||||||| ||  ||||||||||||||    
T  36626728 cttaatatatcatttggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtc 36626806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 48035427 - 48035365
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  48035427 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48035365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 50150734 - 50150796
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||| | ||||||||||| ||||||||||||||    
T  50150734 gtcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtc 50150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 51401454 - 51401392
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  51401454 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 51401392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 53047910 - 53047972
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  53047910 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 53047972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 54654085 - 54654007
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  54654085 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtc 54654007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 2225127 - 2225064
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtct 97  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| || ||||||||||||    
T  2225127 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtctcaatttggtct 2225064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 18024576 - 18024636
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 87  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  18024576 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 18024636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 30385192 - 30385252
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 87  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  30385192 tcatttggtcccttaacttattttttggtttcattttggtcccgtaactattaaaagtttc 30385252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 42592411 - 42592471
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 87  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  42592411 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 42592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 50002552 - 50002643
Alignment:
Q  160 agatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||||||||||||| |||||| |||| |||||||  |||||||||||||  |||||  | |  |||||||| ||||||| ||||||||||||    
T  50002552 agatcgttggataaaggagatccatcagatctaacggtgtatcaccaacacataatttatattgttttcttcctcttctt-cttcatcttcat 50002643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 50003342 - 50003258
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||| |||||||| ||||||||||||| ||     |||| | ||||||||||||||||||||||||||||  ||||| |||||    
T  50003342 cttaattgatcatttggtcccttaacttaattctttatttcgaattggtcccctaactattaaacgtttcaaaatggtcctttat 50003258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 5417151 - 5417108
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||||||||||||| | ||||| |||||||||||||||||    
T  5417151 gtcccttaacttattttcggatttcattttggtcccctaactat 5417108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 11483090 - 11483047
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||    
T  11483090 gtcccttaacttattttcagatttcattttggtcccttaactat 11483047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 39530808 - 39530867
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    ||||||||||||||||| | || ||| | || |||| |||||||||||||||||||||||    
T  39530808 gtcccttaacttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttg 39530867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 47808225 - 47808146
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| |||| ||||||||||||||||||||  | ||||| |||||| || ||||||| ||  || ||||||||||||    
T  47808225 cttaatacatcacttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtct 47808146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 49122121 - 49122042
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||||||| |||| ||||||||||||  ||||||| ||||||| | ||||||| ||  || ||||||||||||    
T  49122121 cttaatatatcatttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtct 49122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 52292607 - 52292650
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||||||||||||| | ||||| |||||||||||||||||    
T  52292607 gtcccttaacttattttcggatttcattttggtcccctaactat 52292650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 53342732 - 53342791
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  53342732 ccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 53342791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 11219428 - 11219506
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    |||||||||  ||| |||| ||||||||||||  | ||||| ||||||||||||||||| ||  || ||||||||||||    
T  11219428 ttaatagatgctttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtct 11219506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 12062487 - 12062425
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||   |||||| ||||||||| ||||||||||  || |||||||||||    
T  12062487 gtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtc 12062425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 17345308 - 17345366
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaacta 76  Q
    ||||||| || |||| |||||||||||||||||  |||||||  |||||||||||||||    
T  17345308 cttaatacattatttggtcccttaacttatttttggttttcaggttggtcccctaacta 17345366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 19579397 - 19579335
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  19579397 gtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtc 19579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 19622003 - 19622061
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||| ||||||| |||| |||| |||||||  ||||||| |||||||||||||||||    
T  19622003 ttaatacatcatttggtcctttaagttatttttggttttcactttggtcccctaactat 19622061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 36627198 - 36627240
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaac 336  Q
    |||||||||| |||||||||||||||||| |||| ||||||||    
T  36627198 aaaatttatcatttcaacttcaacaaaaatcacataatcaaac 36627240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 39287483 - 39287545
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||  || |||||||||||    
T  39287483 gtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtc 39287545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 39288538 - 39288480
Alignment:
Q  38 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  39288538 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 39288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 43101899 - 43101969
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||||||||||||  ||||||| |||||||| |||| ||| ||  || |||||||||||    
T  43101899 atcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtc 43101969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 46688567 - 46688637
Alignment:
Q  183 atcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 252  Q
    |||| |||||||| ||||||||||||| |||| ||||||||  | || |||||||||||||||||| ||||    
T  46688567 atcatatctaactgtgtatcaccaacacctaatttattttacctatcatcatcttcttccttcatcatcat 46688637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 48867533 - 48867471
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||   || ||||||||||||| ||||||||||  || |||||||||||    
T  48867533 gtcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtc 48867471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 53049140 - 53049078
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||    
T  53049140 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtc 53049078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 54353312 - 54353362
Alignment:
Q  287 ttctttcaaaatttatcttttcaacttcaacaaaaagcacaaaatcaaaca 337  Q
    ||||||||||| ||||| |||||||||||||||||| |||| ||| |||||    
T  54353312 ttctttcaaaaattatcatttcaacttcaacaaaaaccacataattaaaca 54353362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 55442608 - 55442650
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||||||||||||||  ||||| |||||||||||||||||    
T  55442608 tcccttaacttattttcaaatttcattttggtcccctaactat 55442650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 55443653 - 55443591
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  55443653 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 55443591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 17934129 - 17934060
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||||||||||  | |||   ||||||||| ||||||||||| |||||  |||||||    
T  17934129 tcatttagtcccttaacttattttttggttttgttttggtcccttaactattaaaagtttcgttttggtc 17934060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 19253099 - 19253046
Alignment:
Q  40 taacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    |||||||||||  ||||||||||||||||||||| ||| ||| || ||||||||    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttg 19253046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 32999812 - 32999869
Alignment:
Q  36 cccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    ||||||||||||||| | || ||| ||||||||| ||||||||||| |||| ||||||    
T  32999812 cccttaacttattttaatttctcagtttggtcccttaactattaaatgttttaatttg 32999869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 52705410 - 52705349
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||| ||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  52705410 tccctcaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 2088855 - 2088965
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaatt 132  Q
    ||||||||| ||||||| | || ||| || |||||| ||| ||||||| ||||||||||||||  ||||| || ||| ||||| |||||||||||| |||    
T  2088855 gtcccttaatttattttaatttctcagttaggtcccttaattattaaatgtttcaatttggtc-cttatctttgttttcatca-tcaatttggtcctatt 2088952  T
Q  133 ttatccattttaa 145  Q
    ||||  |||||||    
T  2088953 ttattaattttaa 2088965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 7583483 - 7583551
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||| ||||||||||||| | ||||| |||||||| |||||||| ||  || |||||||||||| ||||    
T  7583483 gtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtctcttat 7583551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 28909722 - 28909658
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaa 81  Q
    ||||||||| ||||| |||||  ||| | |||||||||||||| ||||||||| |||||| ||||    
T  28909722 acttaataggtcattcagtcctctaattaattttcagttttcattttggtcccataactaataaa 28909658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 47806814 - 47806866
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtccc 69  Q
    |||||||| |||||||||| ||||||||||||||  | ||||| |||||||||    
T  47806814 acttaatacatcatttagtaccttaacttatttttggatttcattttggtccc 47806866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 53901583 - 53901647
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 99  Q
    |||||||| ||||||| | || ||| ||| ||||| ||||||||||| |||| ||||||||||||    
T  53901583 tcccttaatttattttaatttctcagtttagtcccttaactattaaatgttttaatttggtcttt 53901647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 29 - 252
Target Start/End: Complemental strand, 49923873 - 49923649
Alignment:
Q  29 atttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtcc 128  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||    
T  49923873 atttggtcccttaacttattttcagtttttaatttggtcccttaactattaaacgtttcaaattggtcctttatcttcttttcatcattcaatttggccc 49923774  T
Q  129 aattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaatttt 227  Q
     |||||||  |||||||| |||       ||||| ||||||||| ||||| ||||||| |||||||| |||||||||||||  | | |||||||| ||||    
T  49923773 tattttatttattttaaccctcaagaaaaggagaccgttggatagatgaggtctatcagatctaactgtgtatcaccaacacgtgatttattttactttt 49923674  T
Q  228 cttcatcttcttccttcatcttcat 252  Q
    |||||||||||||| ||||||||||    
T  49923673 cttcatcttcttccctcatcttcat 49923649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 54372743 - 54372934
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  54372743 cttaatacatcatttggtcccttaacttattttccgttttcaatttggtcctctaactattaaacgttccaaattggtcctttatcttctttccatcatt 54372842  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 209  Q
    ||||||||||| ||||||| ||||||||| | |       ||||| ||||||||||||||| ||||| | |||||||| |||||||||||||    
T  54372843 caatttggtcctattttattcattttaacccccaagaaaaggagaccgttggataaatgaggtctattagatctaactgtgtatcaccaaca 54372934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 37642660 - 37642395
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| || |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  | ||| ||||||||||||||||||||    
T  37642660 cttaatacattatttggtcccttaacttattttctgttttcaatttagtcccctaactattaaacgtttcaaaatagtcctttatcttctttccatcatt 37642561  T
Q  118 caatttggtccaattttatccattttaacactc--nnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatc---- 211  Q
    ||||||||||| |||| || ||||||||| |||         ||||| | ||||||||||||| | ||||| |||||| | ||||||||||||| |        
T  37642560 caatttggtcctatttcattcattttaac-ctccaaaaaaaaggagaccattggataaatgaggtttatcagatctaattgtgtatcaccaacacctgat 37642462  T
Q  212 taattattttaattttcttcatcttcttc------cttcatcttcatacaaccttcatcaatcttca 272  Q
    | ||||||||| |||||||||||||||||      ||||||||||||||||||||||||||||||||    
T  37642461 ttattattttacttttcttcatcttcttccctcatcttcatcttcatacaaccttcatcaatcttca 37642395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 54374071 - 54373880
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||    
T  54374071 cttaatacatcatttgatcccttaacttattttcagttttcaatttggtcccctaactattaaacgttctaaattggtcctttatcttctttccatcatt 54373972  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca 209  Q
    ||||||||||| ||||||| ||||||||| | |       ||||| |  |||||||||||| ||||| | |||||||| |||||||||||||    
T  54373971 caatttggtcctattttattcattttaacccccaagaaaaggagaccactggataaatgaggtctataagatctaactgtgtatcaccaaca 54373880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 272
Target Start/End: Original strand, 49922525 - 49922765
Alignment:
Q  39 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatcc 138  Q
    |||| ||||||| |||||| |||||||||   ||| |||||||| |||||| ||||||||||||||||||||  ||||||||||||  || ||||||| |    
T  49922525 ttaatttatttttagtttttaatttggtcttttaattattaaacatttcaaattggtcttttatcttctttctgtcattcaatttgaccctattttattc 49922624  T
Q  139 attttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aattattttaattttcttcatcttc 237  Q
    |||||||| |||        |||| ||||||||| ||||| ||||||| |||||||| |||| ||||||||  | | |||||||| ||||| ||||||||    
T  49922625 attttaaccctcaagaaaatgagaccgttggatagatgaggtctatcagatctaactgtgtagcaccaacacatgatttattttacttttcgtcatcttc 49922724  T
Q  238 tt------ccttcatcttcatacaaccttcatcaatcttca 272  Q
    ||       ||||||||||||||||||||||||||||||||    
T  49922725 tttcctcaacttcatcttcatacaaccttcatcaatcttca 49922765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 273
Target Start/End: Original strand, 5546940 - 5547172
Alignment:
Q  44 ttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccatttt 143  Q
    |||||||  ||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||| ||||||| |||||  |   ||||||| ||||||    
T  5546940 ttattttatgttttcaatttgg-cccctaactattaaacgtatcaaattggtcctttatcttcttttcatcatttaatttaat---attttattcatttt 5547035  T
Q  144 aacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatc-taattattttaattttcttcatcttcttc-- 240  Q
    ||||| |       ||||| ||||||||||||||  ||||||| |||||| | || |||||||||| |  | |||||||| |||| |||||| |||||      
T  5547036 aacacccaaaaaaaggagaccgttggataaatgacgtctatcagatctaagtgtgaatcaccaacaccagatttattttactttttttcatcatcttcct 5547135  T
Q  241 ----cttcatcttcatacaaccttcatcaatcttcac 273  Q
        |||||||||||||||||||||||||||||||||    
T  5547136 ccatcttcatcttcatacaaccttcatcaatcttcac 5547172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 242
Target Start/End: Complemental strand, 20945543 - 20945371
Alignment:
Q  71 taactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggag-atcgttgg 169  Q
    |||||||||||||||||| ||||||  ||| |||| |||||||||||||| ||||||| |||| ||  |||||||| |||        ||| | ||||||    
T  20945543 taactattaaacgtttcattttggttctttctcttatttccatcattcaacttggtcctatttcattaattttaac-ctcctaaaaaagaggaccgttgg 20945445  T
Q  170 ataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttcct 242  Q
    ||||||||| ||||| | |||||||| ||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  20945444 ataaatgagttctattagatctaactgtgtatcaccaacacctaatttattttagtttgcttcatcttcttcct 20945371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 21570542 - 21570320
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcat 116  Q
    ||||||| ||| ||| ||||||||||||| ||    ||||| | ||||||||||||||||||||||||||||||||||| |||||| || ||| |||||     
T  21570542 cttaatacatcgtttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacgtttcaatttggtcatttatctttgttttcatca- 21570444  T
Q  117 tcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 216  Q
    |||||||| ||| |||||||  |||||||  |||       | ||| ||||||||||| ||| ||||||| ||||||   |||||||||| |  ||||||    
T  21570443 tcaatttgatcctattttattaattttaaacctctcaaaaagaagaccgttggataaaggaggtctatcagatctaatcgtgtatcaccagcgcctaatt 21570344  T
Q  217 attttaattttcttcatcttcttcc 241  Q
    || || | |||||||||||||||||    
T  21570343 atatt-actttcttcatcttcttcc 21570320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 11115099 - 11115040
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  11115099 cttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactat 11115040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 20944416 - 20944498
Alignment:
Q  161 gatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttcct 242  Q
    |||||||||||||||||||||||| | |||||||  ||||||||||||| |||| |||||||| ||| |||||||||||||||    
T  20944416 gatcgttggataaatgagatctattagatctaaccgtgtatcaccaacacctaatttattttagtttgcttcatcttcttcct 20944498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 27408760 - 27408838
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||  || |||||||||||    
T  27408760 cttaatacatcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtc 27408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 37558995 - 37559073
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| || ||||||||||||||  ||||||||||||||||||||||||| ||| || |||||||||||    
T  37558995 cttaatacatcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtc 37559073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 37560418 - 37560340
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  || |||||||||||    
T  37560418 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 37560340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 43894102 - 43894180
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||| |||||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||||||    
T  43894102 cttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtc 43894180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 49923915 - 49923858
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaact 75  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  49923915 cttaatatatcatttggtcccttaacttattttcagttttcaatttggtcccttaact 49923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 6616330 - 6616271
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  6616330 cttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactat 6616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 33377483 - 33377405
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||| ||  || |||||||||||    
T  33377483 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtc 33377405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 21569246 - 21569334
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||||| ||||||| ||||||||||||| ||    || |  | ||||||||||||||||||||||||||||||||||| ||||||||    
T  21569246 acttaatacatcatttggtcccttaacttaattctttttattgaattggtcccctaactattaaacgtttcaatttggtcatttatctt 21569334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 54373837 - 54373785
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  54373837 aaaattcatcatttcaacttcaacaaaaaccacaaaatcaaacatttaaattt 54373785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 5417317 - 5417376
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||||||| |||||||||||    
T  5417317 gtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaatttg 5417376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 5548725 - 5548674
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgttt 86  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  5548725 tcccttaacttattttccgttttcaatttaatcccctaactattaaacgttt 5548674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 29686253 - 29686312
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||| |||||||    
T  29686253 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactat 29686312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 39590938 - 39590997
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  39590938 cttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactat 39590997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 47668716 - 47668657
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||| ||||||||||||| ||||||| |||||||||||||||||    
T  47668716 cttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactat 47668657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 55953972 - 55953893
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| |||||||  ||||||||||||||||   |||||||||||||||| ||||||| ||| || |||||||||||    
T  55953972 acttaatatatcatttgatcccttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtc 55953893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 86800 - 86878
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||||||| ||||| ||||||| |||||||| |||||| |||||||||| || | | |||||||||||    
T  86800 cttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtc 86878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 11482809 - 11482871
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||| ||||||||||||||    
T  11482809 gtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtc 11482871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 1273550 - 1273474
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| ||||||| |||||||||||||||||  ||||| ||||||||||||||||||| ||  || |||||||||||    
T  1273550 ttaatatatcatttggtcccttaacttatttttggtttt-aatttggtcccctaactataaagtgtctcaatttggtc 1273474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 43709977 - 43709912
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 99  Q
    ||||||||||||||||| | || ||| | | ||||| |||||||||||||||||||||||||||||    
T  43709977 gtcccttaacttattttaatttctcagtgtagtcccttaactattaaacgtttcaatttggtcttt 43709912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 46425973 - 46425862
Alignment:
Q  165 gttggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat---acaacctt 260  Q
    |||||||||| ||| || |||| || ||||  ||||| |||||||||||||| ||| || |||||||||||||||| | ||||||||||   ||||| ||    
T  46425973 gttggataaaggaggtccatcagatttaacggtgtataaccaacatctaatttattctatttttcttcatcttcttacctcatcttcatcacacaacatt 46425874  T
Q  261 catcaatcttca 272  Q
    ||||||||||||    
T  46425873 catcaatcttca 46425862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 52658924 - 52658985
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    |||||||||||||||||   |||||| ||||||||||||||||| ||| |||||||||||||    
T  52658924 gtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggt 52658985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 30682717 - 30682797
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctt 98  Q
    ||||||| || |||| ||||||||||||||||| |||||||| ||||||||| ||||||| ||  || | |||||||||||    
T  30682717 cttaatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtctt 30682797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 49923595 - 49923543
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||||||    
T  49923595 aaaattcatcatttctacttcaacaaaaaccacaaaatcaaacatttaaattt 49923543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 306590 - 306652
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||    
T  306590 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 306652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 11113739 - 11113818
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||| ||| ||||| ||||||| ||  || ||||||||||||    
T  11113739 cttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtct 11113818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 21104429 - 21104350
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||||||| || |||||| |||||||  ||||||| ||||||||||||||||| ||  || ||||||||||||    
T  21104429 cttaatatatcatttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtct 21104350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 35789709 - 35789650
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||||||| |||||||||||||  ||||||| ||||||||| |||||||    
T  35789709 cttaatacatcatttagtctcttaacttatttttggttttcactttggtcccgtaactat 35789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 39592408 - 39592349
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| ||| |||||||||||||    
T  39592408 cttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactat 39592349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 46794853 - 46794915
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaac-gtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||    
T  46794853 gtcccttaacttatttttggatttcaatttggtcccctaact-ttaaactgtttcaatttggtc 46794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 2310885 - 2310823
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||| || |||||||||||    
T  2310885 gtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtc 2310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 5548627 - 5548514
Alignment:
Q  165 gttggataaatgagatctatcaaatctaactatgtatcaccaacatctaat-tattttaattttcttcatct-tcttc-----cttcatcttcatacaac 257  Q
    ||||||| |||||| ||||||||||||||||||| || ||||||| ||||| |||||||  ||| ||||||| | |||     |||||||||||||||||    
T  5548627 gttggattaatgaggtctatcaaatctaactatgaattaccaacacctaatatattttacattt-ttcatctcttttcctcatcttcatcttcatacaac 5548529  T
Q  258 cttcatcaatcttca 272  Q
    ||| |||||||||||    
T  5548528 cttaatcaatcttca 5548514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 12396977 - 12396915
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  12396977 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 12396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 15786949 - 15787027
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||| ||||||||||||  ||||||| |||| |||||||||||| ||  || |||||||||||    
T  15786949 cttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtc 15787027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 23752029 - 23752091
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| || ||||||||||||||||||||| | ||  || |||||||||||    
T  23752029 gtcccttaacttatttttagatttcaatttggtcccctaactttaaattgtctcaatttggtc 23752091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 26045145 - 26045203
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 92  Q
    ||||||||||||||||| | || ||| | ||||||| ||||||||||||||||||||||    
T  26045145 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaattt 26045203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 26376342 - 26376404
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||| |||||||  ||||||| |||| |||||||||||| |||||| |||||||||||    
T  26376342 gtcccttaaattatttttggttttcattttgatcccctaactataaaacgtctcaatttggtc 26376404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 29833385 - 29833447
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||| ||| ||| || |||||||||||    
T  29833385 gtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtc 29833447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 32617227 - 32617301
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 101  Q
    ||||||||||||||||||||||||  | ||| | ||||||||| ||||||||||| |||||  ||||||| ||||    
T  32617227 tcatttagtcccttaacttattttttggttttattttggtcccttaactattaaaagtttcgttttggtccttta 32617301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 46796145 - 46796067
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| |||||||||||||||||  ||||| | ||||||||||||||||| ||  || |||||||||||    
T  46796145 cttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtc 46796067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 47573747 - 47573685
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| | ||||||| |||||||||||||||| |||||||||    
T  47573747 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgttttaatttggtc 47573685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 42713462 - 42713547
Alignment:
Q  20 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    ||||| ||||||| |||| |||||||| ||    ||||| ||||| |||| |||||||||| |||||||||||||| |||||||||    
T  42713462 taatatatcatttggtcctttaacttaattctttttttcgatttgatcccttaactattaagcgtttcaatttggttttttatctt 42713547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 5547181 - 5547233
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  5547181 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 5547233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 10403276 - 10403335
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||| |||||||||||||| ||||||||||  ||||| | |||||||||||||||||    
T  10403276 acttaatacatcatttagtccct-aacttatttttggtttttactttggtcccctaactat 10403335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 31204595 - 31204678
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 145  Q
    ||||||||||||||||||||||||||||  ||||| |||||| || |||  |||| |||||||||||| |||||||  |||||||    
T  31204595 ttggtcccctaactattaaacgtttcaaaatggtcatttatctttattttaatca-tcaatttggtcctattttattaattttaa 31204678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 31205817 - 31205741
Alignment:
Q  29 atttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||| ||||||||||||| ||    ||||| | ||||||||||||||||||||||||||||  ||||| ||||||||    
T  31205817 atttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctt 31205741  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 35787815 - 35787871
Alignment:
Q  40 taacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||  ||||||| |||||||| |||||||| ||| ||||||||||||||    
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtc 35787871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 37642375 - 37642315
Alignment:
Q  287 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||||||||||| || ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  37642375 ttctttcaaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 37642315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 96784 - 96741
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||||||||||||  ||||||| |||||||||||||||||    
T  96784 gtcccttaacttattttatgttttcactttggtcccctaactat 96741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 31711089 - 31711168
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||  ||||||| ||  || ||||||||||||    
T  31711089 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtct 31711168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 36611056 - 36611127
Alignment:
Q  30 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctttta 101  Q
    |||||||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  ||||||| ||||    
T  36611056 tttagtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtccttta 36611127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 38371924 - 38371853
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaa 89  Q
    ||||||| ||||||  ||| |||||||||||||| ||||||| |||| |||||||||||  |||||| ||||    
T  38371924 cttaatacatcattcggtctcttaacttattttctgttttcagtttgatcccctaactaaaaaacgtctcaa 38371853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 38555379 - 38555336
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||||||||||||| |||||| | |||||||||||||||||    
T  38555379 gtcccttaacttatttttagtttttactttggtcccctaactat 38555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 44128453 - 44128394
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||| ||| |||| ||||||||||||   ||||||||||||||||||||||||    
T  44128453 cttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactat 44128394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 15787621 - 15787543
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||  | |||||| |||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  15787621 cttaatatatcatttttttccttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtc 15787543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 28103597 - 28103527
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  28103597 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtc 28103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 28589782 - 28589844
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaa 81  Q
    ||||||| ||||||  |||||||| | |||||||||||||| ||||||||| ||| |||||||    
T  28589782 ttaataggtcatttgatcccttaaataattttcagttttcattttggtcccataagtattaaa 28589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29688093 - 29688039
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtccccta 72  Q
    ||||||| || |||| |||||||||||||||||  ||||||| ||||||||||||    
T  29688093 cttaatacattatttggtcccttaacttatttttggttttcactttggtccccta 29688039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 33376215 - 33376293
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||| |||||||||||||  ||||||||||| || |||||| ||| ||  || |||||||||||    
T  33376215 cttaatacatcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtc 33376293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 38553927 - 38554005
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    |||||| ||||||| ||||||||| |||||||| ||||| | |||||||  |||||||| ||  || ||||||||||||    
T  38553927 ttaatacatcatttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtct 38554005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 44217627 - 44217688
Alignment:
Q  75 tattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttat 136  Q
    |||||||||||| |||||||||||||||| || ||| ||||| |||||||||||| |||||||    
T  44217627 tattaaacgttttaatttggtcttttatctttgttttcatca-tcaatttggtcctattttat 44217688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 44305098 - 44305020
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||  | | ||||||||||||  ||||||||||||||||||||||||  ||  || |||||||||||    
T  44305098 cttaatatatcatttgattcattaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtc 44305020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 48499507 - 48499598
Alignment:
Q  159 gagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||||||||||| |  ||| ||||||| || | ||  |||||||||||||||||||  |||| | ||| |||||||||||||| |||||||||    
T  48499507 gagatcgttggattacagaggtctatcagattttacggtgtatcaccaacatctaat--tttttactttattcatcttcttcctccatcttcat 48499598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 50498075 - 50498013
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||||| | || ||| | ||||||| ||| ||||||||||||||||||||||    
T  50498075 gtcccttcacttattttaatttctcagtgtggtcccttaattattaaacgtttcaatttggtc 50498013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 32617644 - 32617575
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  |||||||    
T  32617644 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtc 32617575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 47242965 - 47243030
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 99  Q
    ||||||||||||||||| | || ||| |||  |||| ||||||||||| |||| ||||||||||||    
T  47242965 gtcccttaacttattttaatttctcagtttaatcccttaactattaaatgttttaatttggtcttt 47243030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 47244092 - 47244031
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||||||| | || ||| | ||||||| |||||||||||| |||||||||||||    
T  47244092 tcccttaatttattttaatttctcagtgtggtcccttaactattaaacatttcaatttggtc 47244031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 47572600 - 47572661
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||| | || |||  || ||||| ||||||||||| ||||||||||||||    
T  47572600 tcccttaacttattttaatttctcagcttagtcccttaactattaaatgtttcaatttggtc 47572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 48413653 - 48413592
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||| | ||  || | |||| || ||||||||||||||||||||||||||    
T  48413653 tcccttaacttattttaatttcccagtgtggttccttaactattaaacgtttcaatttggtc 48413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 5688727 - 5688679
Alignment:
Q  47 ttttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    |||| |||||||||||||||||||||||||| ||  || ||||||||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggt 5688679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 15445449 - 15445517
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||||||||||||  | ||||| ||||||||||||| ||| ||  || |||||||||||| ||||    
T  15445449 gtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtctcttat 15445517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 40143662 - 40143710
Alignment:
Q  29 atttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||| ||| ||||||||||||| |||||||| ||| |||||||||||||    
T  40143662 atttggtctcttaacttatttttagttttcattttagtcccctaactat 40143710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 49922786 - 49922846
Alignment:
Q  287 ttctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||||||||||| || ||| ||| || |||||||||||  ||||||||||||||||||||||    
T  49922786 ttctttcaaaaattcatcattttaatttcaacaaaaactacaaaatcaaacatttaaattt 49922846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 52880827 - 52880895
Alignment:
Q  35 tcccttaacttattttcag-ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    ||||||||||||||||| | |||| | ||||||||||||||||| ||  || ||||||||||| |||||    
T  52880827 tcccttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtcctttat 52880895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 52981250 - 52981210
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||||||||| |||||||| |||||||||| ||||||    
T  52981250 ccttaacttatttttagttttcattttggtccccaaactat 52981210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 53400200 - 53400260
Alignment:
Q  36 cccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||| || ||||| ||||||||| ||||||| ||  || |||||||||||    
T  53400200 cccttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtc 53400260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 682263 - 682497
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattc 118  Q
    |||||| ||| ||| || ||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  682263 ttaatacatcgtttggttccttaacttattttctgttttcaatttggtcctctaactattaaacgttccaaattggtcatttatcttctttccatcattc 682362  T
Q  119 aatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaaca-tctaatta 217  Q
    |||||||||  ||||||| ||||||||  | |       ||||| ||||||||||||||| ||||||| ||||| || ||||||||||||| |  | |||    
T  682363 aatttggtcttattttattcattttaatccacaaaaaaaggagaccgttggataaatgaggtctatcagatctagctgtgtatcaccaacacttgattta 682462  T
Q  218 ttttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||| |||||||||||||||||| ||||||||||    
T  682463 ttttacttttcttcatcttcttccctcatcttcat 682497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 683659 - 683426
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  683659 cttaatatatcatttggtcctttaacttattttctgttttcaatttggtcccctacctattaaacgtttcaaattggtcttttatcttctttccttcatt 683560  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatct-aatt 216  Q
    ||||||||||| ||||||| |||||||  |  |        |||| ||||| ||||||||| ||||||| |||||||| | |||| |||||| || | ||    
T  683559 caatttggtcccattttattcatttta--atccaaaaaaaagagaccgttgaataaatgaggtctatcagatctaactgtatatctccaacacctgattt 683462  T
Q  217 attttaattttcttcatcttcttccttcatcttcat 252  Q
    |||||| ||||||||||||| || | ||||||||||    
T  683461 attttacttttcttcatcttatttcctcatcttcat 683426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 31738360 - 31738438
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| |||||||||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||||    
T  31738360 cttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtc 31738438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 8411082 - 8411163
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtctt 98  Q
    |||||||| |||||||||| ||||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||||    
T  8411082 acttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctt 8411163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 1757597 - 1757535
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||||| ||||||||||||||||||||||||||    
T  1757597 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtc 1757535  T

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Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 5311276 - 5311354
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||    
T  5311276 cttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtc 5311354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 33802136 - 33802077
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| |||||||||||||||||    
T  33802136 cttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactat 33802077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 8412435 - 8412357
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| || |||| |||||||||||||||||  ||||||||||| ||||||||||||| ||  || |||||||||||    
T  8412435 cttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtc 8412357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 8447230 - 8447296
Alignment:
Q  30 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  8447230 tttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8447296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 8456034 - 8456100
Alignment:
Q  30 tttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||| ||  || |||||||||||    
T  8456034 tttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 27108293 - 27108217
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 94  Q
    |||||||||||  |  ||||||||||||||||| | || ||| ||||||||| |||||||||||||||| |||||||    
T  27108293 cttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27108217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 27150090 - 27150014
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttgg 94  Q
    |||||||||||  |  ||||||||||||||||| | || ||| ||||||||| |||||||||||||||| |||||||    
T  27150090 cttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27150014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 18139606 - 18139547
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| |||| ||| ||||||||    
T  18139606 cttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactat 18139547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 1692086 - 1692152
Alignment:
Q  33 agtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttt 99  Q
    |||||||||| ||||||| | |||||| ||||||| | ||||||||||| |||||||||| ||||||    
T  1692086 agtcccttaatttattttaatttttcagtttggtctcttaactattaaatgtttcaatttagtcttt 1692152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 1693079 - 1693022
Alignment:
Q  39 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||| | |||||| ||||||||| |||||||||||| ||| |||||||||    
T  1693079 ttaacttattttaatttttcagtttggtcccttaactattaaacattttaatttggtc 1693022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 261
Target Start/End: Original strand, 1948861 - 1948958
Alignment:
Q  164 cgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttc 261  Q
    ||||||||||| |||||  || | || |||| ||||||||||||||  |||||| ||| | |||| | |||||||||||||||||||||  |||||||    
T  1948861 cgttggataaaagagattcataagatgtaacgatgtatcaccaacacataattaattttaatttcattatcttcttccttcatcttcatctaaccttc 1948958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 11724398 - 11724337
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||| | |||||  | ||||| | ||||||||||||||||||||||||||    
T  11724398 tcccttaacttattttaatttttcggtgtggtcacttaactattaaacgtttcaatttggtc 11724337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 22300005 - 22299944
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| ||  || |||||||||||    
T  22300005 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtc 22299944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 23644316 - 23644263
Alignment:
Q  200 atcaccaacatctaatt-attttaattttcttcatcttcttccttcatcttcat 252  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||| |||||||    
T  23644316 atcaccaacacctaatttattttacttttcttcatcttcttccttcctcttcat 23644263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 9899571 - 9899631
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 87  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  9899571 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 9899631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 13173050 - 13173118
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || |||||||||||| ||||    
T  13173050 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtctcttat 13173118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 19368621 - 19368553
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||  || |||||||||||| ||||    
T  19368621 gtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttat 19368553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 25439182 - 25439099
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 145  Q
    |||||||  ||| ||| ||||||||||||||||||||||||| || ||| ||| | ||||||||||||||||||||  |||||||    
T  25439182 ttggtcctttaattataaaacgtttcaatttggtcttttatctttgttttcatta-tcaatttggtccaattttattaattttaa 25439099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 30860379 - 30860319
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 87  Q
    ||||| ||||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||    
T  30860379 tcattcagtcccttaacttattttttgatttcattttggtcccttaactattaaaagtttc 30860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 13176451 - 13176368
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||| || |||| ||||||||| | |||||| | ||| | ||| ||||||||||||| ||| || |||||||||||||||||    
T  13176451 ttaatacatgatttggtcccttaattcattttcggattttattttagtcccctaactataaaatgtctcaatttggtcttttat 13176368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 13562379 - 13562328
Alignment:
Q  54 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    ||||||| |||||||| |||||||||||||||||||  ||||| ||||||||    
T  13562379 ttttcaaattggtcccttaactattaaacgtttcaaaatggtcctttatctt 13562328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 18230363 - 18230406
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  18230363 ttggtcccctaaccattaaacgttttaatttggtcctttatctt 18230406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 23638574 - 23638657
Alignment:
Q  167 tggataaatgagatctatcaaatctaactatgtatcaccaacatctaatt-attttaattttcttcatcttcttccttcatctt 249  Q
    ||||||||  ||||||||||||| |||| ||||||||| || |  ||||| |||||| || |||||||||||| ||||||||||    
T  23638574 tggataaaatagatctatcaaatttaacgatgtatcacaaatacttaatttattttacttgtcttcatcttctcccttcatctt 23638657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 24318183 - 24318096
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||| |||||||| ||||||||||||| ||    ||||| | |||||||| ||| |||||||| ||| ||||||||| ||||||||    
T  24318183 cttaattgatcatttggtcccttaacttaattctttttttcgaattggtcccttaattattaaactttttaatttggtcctttatctt 24318096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 28225420 - 28225499
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||  ||| ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  28225420 acttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 28225499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 9927619 - 9927681
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  ||||| | ||||||||||||||||| ||  || |||||||||||    
T  9927619 gtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtc 9927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 14174121 - 14174175
Alignment:
Q  39 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    |||||||||||| | || ||| |||||||| ||||||||||||| ||||||||||    
T  14174121 ttaacttattttaatttctcagtttggtccactaactattaaacttttcaatttg 14174175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 14178657 - 14178711
Alignment:
Q  39 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    |||||||||||| | || ||| |||||||| ||||||||||||| ||||||||||    
T  14178657 ttaacttattttaatttctcagtttggtccactaactattaaacttttcaatttg 14178711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 18498261 - 18498311
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaat 344  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||    
T  18498261 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaat 18498311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 19048262 - 19048324
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  |||||||    
T  19048262 gtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtc 19048324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 19367730 - 19367792
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  19367730 gtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 19367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 24317099 - 24317133
Alignment:
Q  71 taactattaaacgtttcaatttggtcttttatctt 105  Q
    |||||||||||||||||||||||||| ||||||||    
T  24317099 taactattaaacgtttcaatttggtcatttatctt 24317133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 31740375 - 31740313
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||| ||  || |||||||||||    
T  31740375 gtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtc 31740313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 346
Target Start/End: Original strand, 682550 - 682595
Alignment:
Q  301 atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    ||| |||||||||||||||||| |||| |||||||| |||||||||    
T  682550 atcatttcaacttcaacaaaaaccacataatcaaacctttaaattt 682595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 18773668 - 18773729
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||  | ||||| ||||||||||||| ||| ||| || |||||||||||    
T  18773668 tcccttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtc 18773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 26584140 - 26584079
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    |||||||||||||||||| | ||| | ||||||||||||||||| ||  || ||||||||||    
T  26584140 gtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggt 26584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 30859931 - 30860000
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||  |||||||    
T  30859931 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcgttttggtc 30860000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 10673650 - 10673690
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||| |||||| ||||||||||||||||||| |||||    
T  10673650 ttggtcccttaactaataaacgtttcaatttggtcctttat 10673690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 99
Target Start/End: Original strand, 25437833 - 25437861
Alignment:
Q  71 taactattaaacgtttcaatttggtcttt 99  Q
    |||||||||||||||||||||||||||||    
T  25437833 taactattaaacgtttcaatttggtcttt 25437861  T

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Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 55 - 252
Target Start/End: Original strand, 20921544 - 20921742
Alignment:
Q  55 tttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacact-cnnn 153  Q
    |||||| |||||||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||| ||         
T  20921544 tttcaaattggtcccctaaatattaaacgtttcaaattggtccttgatcttctttccatcattcaatttggtcctattttattcattttaaccctaaaaa 20921643  T
Q  154 nnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 252  Q
        |||||  |||||||||||||| ||||||| |||||||| | ||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  20921644 aaaaggagactgttggataaatgaggtctatcatatctaactgtatatcaccaacacctaattattttctttttcttcatcttcttccttcatcttcat 20921742  T

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Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 37 - 251
Target Start/End: Original strand, 12364206 - 12364420
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttat 136  Q
    |||||| |||||||| ||||| |||||| ||  ||||||||||||||||| || |||||| |||||||||||||  || ||||||||||||| |||| ||    
T  12364206 ccttaatttattttctgtttttaatttgatcatctaactattaaacgttttaaattggtcatttatcttctttcagtccttcaatttggtcctatttaat 12364305  T
Q  137 ccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatctt 236  Q
      |||||||| | |       || || | ||||||||||||| ||||||| |||||||| |||||||||||||  |||||  |||  |||||||||||||    
T  12364306 ttattttaacccccaaaaaaaggggaccattggataaatgaggtctatcagatctaactgtgtatcaccaacacataatttattttcttttcttcatctt 12364405  T
Q  237 cttccttcatcttca 251  Q
    ||||| |||||||||    
T  12364406 cttccctcatcttca 12364420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 87 - 265
Target Start/End: Complemental strand, 12366066 - 12365891
Alignment:
Q  87 caatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatca 186  Q
    |||| ||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||||| | |       ||||| |||||||||||||||||||||||    
T  12366066 caatctggtcctttatattctttccatcattcaatttggtcctattttattcattttaacccccaaaat--ggagaccgttggataaatgagatctatca 12365969  T
Q  187 aatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttcatca 265  Q
     || ||||| ||||||||||||| || |||  |||  |||||||||||||||||| |||||||||| ||| ||||||||    
T  12365968 gatataactgtgtatcaccaacacctgatttattttcttttcttcatcttcttccctcatcttcat-caatcttcatca 12365891  T

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Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 20921478 - 20921556
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  20921478 cttaatatatcatttggtcctttaatttattttcaattttcaatttggtcccctaaatattaaacgtttcaaattggtc 20921556  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 42596557 - 42596635
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| ||||||||||||||||||  |||| | |||||||||||||||||||||||| |||||||||||    
T  42596557 cttaatacatcatttggtcccttaacttattttcgttttttattttggtcccctaactattaaacgtctcaatttggtc 42596635  T

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Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 37867753 - 37867831
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  37867753 cttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtc 37867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 370910 - 370986
Alignment:
Q  164 cgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttcc 241  Q
    ||||||||||||||| ||||||||||||||   ||||||||||||| |||||||| || | |||||||||||||||||    
T  370910 cgttggataaatgaggtctatcaaatctaatggtgtatcaccaacacctaattatatt-actttcttcatcttcttcc 370986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 33553467 - 33553406
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||| | |||||| ||||||| | ||||||||||||||||||||||||||    
T  33553467 tcccttaacttattttaatttttcagtttggtctcttaactattaaacgtttcaatttggtc 33553406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 3255981 - 3255913
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| ||  ||||||||||||||| ||||    
T  3255981 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtctcttat 3255913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 4630187 - 4630119
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| ||  || |||||||||||| ||||    
T  4630187 gtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtctcttat 4630119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 35799508 - 35799588
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtct 97  Q
    |||||||| |||||||  ||||||||||||||||  ||||||||||| ||||||||||||| ||  || ||||||||||||    
T  35799508 acttaatacatcatttcatcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtct 35799588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 23178993 - 23178942
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  23178993 atcatttggtcccttaacttatttttagttttcactttggtcccctaactat 23178942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 23590250 - 23590199
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  23590250 atcatttggtcccttaacttatttttagttttcactttggtcccctaactat 23590199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 1257507 - 1257613
Alignment:
Q  39 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatcc 138  Q
    ||||||||||||| |||||||||||  |||| | |||||||||| ||| || ||| || |||||||||||| ||| |||| || |||| | ||||||| |    
T  1257507 ttaacttattttcggttttcaattttatcccttgactattaaacattttaaattgatcatttatcttcttttcattattcgatgtggttctattttattc 1257606  T
Q  139 attttaa 145  Q
    |||||||    
T  1257607 attttaa 1257613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 3665237 - 3665299
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| |||||||| |||||||| ||| ||||||||||||||    
T  3665237 gtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtc 3665299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 11575574 - 11575500
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 92  Q
    ||||||| ||||||| |||| ||||||||||||  ||||| | ||||||||||||||||| ||| ||||||||||    
T  11575574 cttaatacatcatttggtccattaacttatttttggttttaattttggtcccctaactataaaatgtttcaattt 11575500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 41796071 - 41795993
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||||||||||||||||||||   |||||| |||| |||||||||||| ||  || |||||||||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtc 41795993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 372050 - 371959
Alignment:
Q  54 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatc-ttctttccatcattcaatttggtccaattttatccattttaa 145  Q
    ||||||| || ||||||||||||||||||||||||||||| || |||||| || ||| ||||| |||||||| ||| |||||||  |||||||    
T  372050 ttttcaaattagtcccctaactattaaacgtttcaatttgatcctttatctttgttttcatca-tcaatttgatcctattttattaattttaa 371959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 7038451 - 7038373
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||||||||||||||||  | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  7038451 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtc 7038373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 33836785 - 33836850
Alignment:
Q  37 ccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttat 102  Q
    ||||||||||||||| | ||||| ||||||||||||||||| ||  || ||||||||||| |||||    
T  33836785 ccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcatttat 33836850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 39110083 - 39110152
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||||  |||||||    
T  39110083 tcatttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtc 39110152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 2581803 - 2581878
Alignment:
Q  21 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| ||||||| ||||  |||||||||||  |||||||||||| |||||||||||| ||  || |||||||||||    
T  2581803 aatacatcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtc 2581878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 3666376 - 3666309
Alignment:
Q  29 atttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| |||||||||||||||||| | ||||| ||||||||| ||||||| ||  || |||||||||||    
T  3666376 atttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtc 3666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 32614382 - 32614441
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||| ||||||||   |||||| |||||||||||||||||    
T  32614382 cttaatatatcatttggtcccttagcttattttattttttcattttggtcccctaactat 32614441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 33837858 - 33837815
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||||||||||||||| ||| | |||||||||||||||||    
T  33837858 gtcccttaacttattttcagattttattttggtcccctaactat 33837815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 35061271 - 35061334
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaa 81  Q
    |||||||| ||||||| |||| ||| | |||||||||||||| ||||||||| |||||| ||||    
T  35061271 cttaataggtcatttaatcccctaattaattttcagttttcattttggtcccataactaataaa 35061334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 7036963 - 7037041
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||||| |||| ||||||||||||  | ||||| ||| ||||| ||||||| ||  ||||||||||||||    
T  7036963 cttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtc 7037041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 10368503 - 10368445
Alignment:
Q  19 ttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||| ||||||| ||||||||| |||||||   ||||||||||| ||||||||||||    
T  10368503 ttaatacatcatttggtcccttaatttatttttgattttcaatttgatcccctaactat 10368445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 11386642 - 11386696
Alignment:
Q  39 ttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttg 93  Q
    |||||||||||| |||||| ||||||||||| ||||||| ||  |||||||||||    
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttg 11386696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 12854207 - 12854145
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| || ||||| ||||||||| ||||||| ||  || |||||||||||    
T  12854207 gtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtc 12854145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 20630774 - 20630712
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||| |||||||||| | || ||| |||  |||| ||||||||||||||||||||||||||    
T  20630774 gtccctaaacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtc 20630712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 28109989 - 28109939
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtc 67  Q
    |||||||| || |||| |||||||||||||||||  |||||||||||||||    
T  28109989 acttaatatatgatttggtcccttaacttatttttcgttttcaatttggtc 28109939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 29424715 - 29424653
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  ||||| |  |||||||||||||||| ||  ||||||||||||||    
T  29424715 gtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtc 29424653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 39272309 - 39272251
Alignment:
Q  38 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||  | |||||| ||||||||  |||||||||||||||| |||||||||    
T  39272309 cttaacttatttaaatttttcagtttggtcctttaactattaaacgttttaatttggtc 39272251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 42027190 - 42027268
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| |||||||||||||||||   |||||| |||||||| |||||||  ||| || |||||||||||    
T  42027190 cttaatacatcgtttggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtc 42027268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 6706939 - 6707000
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    |||||||||||||||||  | ||||| ||||||||||||||||| ||  || ||||||||||    
T  6706939 gtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggt 6707000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 30202986 - 30202945
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaact 75  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  30202986 gtcccttaacttatttttggatttcaatttggtcccctaact 30202945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 4701607 - 4701547
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    |||||||| ||||||| ||||||||| |||||||   |||||| |||| ||||||||||||    
T  4701607 acttaatatatcatttggtcccttaatttatttttgattttcactttgatcccctaactat 4701547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 36099304 - 36099364
Alignment:
Q  27 tcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttc 87  Q
    |||||| |||||||||||||||||  | ||||  ||||||||| ||||||||||| |||||    
T  36099304 tcatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 36099364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 35360 - 35611
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| |||||||  ||||||| |||||||||  |||  |||||||||| ||||||||||||||||| || |||||  |||||||||||||||| |||    
T  35360 cttaatatatcatttgttcccttaccttattttctatttataatttggtcctctaactattaaacgttttaaattggttctttatcttctttccattatt 35459  T
Q  118 caatttggtccaattttatccattttaacactcnnnnnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-tt 216  Q
    ||| ||||||  ||||||| ||||||||||| |       ||||| | ||||||||||||| | ||||| |||||||| ||||||||||||| |||| ||    
T  35460 caa-ttggtcatattttattcattttaacacccataaaaaggagaccattggataaatgaggtttatcagatctaactgtgtatcaccaacacctaattt 35558  T
Q  217 attttaattttcttcatcttcttccttcatcttcatacaacc-ttcatcaatcttca 272  Q
    |||||| ||||||||||| |    |||||||||||||||||| ||||||||||||||    
T  35559 attttacttttcttcatcat----cttcatcttcatacaacctttcatcaatcttca 35611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 36845 - 36735
Alignment:
Q  38 cttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatc 137  Q
    |||||||||||||| ||||||||||||||| | || |||||||| ||||||| || |||||||||||||||||||||||||||||||||   |||||||     
T  36845 cttaacttattttctgttttcaatttggtctcttacctattaaatgtttcaaattagtcttttatcttctttccatcattcaatttggtgttattttatt 36746  T
Q  138 cattttaacac 148  Q
     ||||||||||    
T  36745 aattttaacac 36735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 272
Target Start/End: Complemental strand, 36685 - 36584
Alignment:
Q  164 cgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcatacaaccttcat 263  Q
    ||||||||||||||| ||||||| |||||||| ||||||||| ||  ||||||| ||| |  || |||||       ||||||||||||||||| || ||    
T  36685 cgttggataaatgaggtctatcagatctaactgtgtatcacccacgcctaattaattttacatttttcat-------cttcatcttcatacaactttaat 36593  T
Q  264 caatcttca 272  Q
    |||||||||    
T  36592 caatcttca 36584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 74; Significance: 7e-34; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 98784 - 98634
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattt 133  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||  || |||||  ||||||||||||||||||||||||||||||| ||||    
T  98784 gtcccttaacttattttcagttttcaatttggtcctctgactattaaacgttctaaattggttctttatcttctttccatcattcaatttggtcctattt 98685  T
Q  134 tatccattttaacactcnnnnnnnggagatcgttggataaatgagatctat 184  Q
    ||| || |||||| |||       ||||| |||| |||||||||| |||||    
T  98684 tattcagtttaaccctcaaaagaaggagaccgttcgataaatgaggtctat 98634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 98046 - 98174
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcatt 117  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||| |  | | |||||||||||||  || |||||| |||||||||||| |||||||    
T  98046 cttaatacatcatttgatcccttaacttattttcagttttcaatttgatgtctttactattaaacgttctaaattggtcctttatcttcttttcatcatt 98145  T
Q  118 caatttggtccaattttatccattttaac 146  Q
    ||||||||||| ||||||| |||||||||    
T  98146 caatttggtcctattttattcattttaac 98174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 98318 - 98379
Alignment:
Q  286 attctttcaaaattt-atcttttcaacttcaacaaaaagcacaaaatcaaacatttaaattt 346  Q
    |||||||||||| || ||| |||||||||||||||||| |||||||| ||||||||||||||    
T  98318 attctttcaaaaattcatcatttcaacttcaacaaaaaccacaaaattaaacatttaaattt 98379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 98264 - 98295
Alignment:
Q  241 cttcatcttcatacaaccttcatcaatcttca 272  Q
    ||||||||||||||||||||||||||||||||    
T  98264 cttcatcttcatacaaccttcatcaatcttca 98295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 54 - 272
Target Start/End: Complemental strand, 1207 - 982
Alignment:
Q  54 ttttcaatttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnn 153  Q
    ||||||| |||||||| ||||  ||||| |||||||||||| | |||||||| ||| |||||||||||||||||| |||| ||| ||||||||   |       
T  1207 ttttcaaattggtcccttaaccgttaaatgtttcaatttggccctttatcttattttcatcattcaatttggtcctatttcatcaattttaacgtgctaa 1108  T
Q  154 nnnnggagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttc------cttcat 246  Q
        ||||| ||||| ||||||||  | ||||| |||||||  ||||||||||||| | || |||||||| |||||||||||||||||      ||||||    
T  1107 aaaaggagaccgttgaataaatgaagtatatcagatctaaccgtgtatcaccaacaccaaatttattttacttttcttcatcttcttccctaatcttcat 1008  T
Q  247 cttcatacaaccttcatcaatcttca 272  Q
    ||||||||||| ||||||||||||||    
T  1007 cttcatacaacattcatcaatcttca 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 608 - 799
Alignment:
Q  62 ttggtcccctaactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaacactcnnnnnnnggag 161  Q
    |||||||| |||  ||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||| ||| |||||||            ||||    
T  608 ttggtcccttaatcattaaacgtttcaatttggtcctttatattgtttccatcattcaatttggtcctatttaatcaattttaatgggttaaaaaaggag 707  T
Q  162 atcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttcttccttcatcttcat 252  Q
    | |||||||||||| |  | ||||| |||||||| | ||||||||||||| || || ||||| ||||||||||||| |||| | ||||||||    
T  708 accgttggataaataaagtatatcagatctaactgtatatcaccaacatcaaatttgttttacttttcttcatctttttccctaatcttcat 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 85179 - 85117
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| | ||||||| |||||||||| |||||||||||||||    
T  85179 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtc 85117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 77297 - 77222
Alignment:
Q  21 aatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||| ||||||||||| |||||||||||||  ||||||| ||||||| ||||||||| || |||||||||||||||    
T  77297 aatacatcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtc 77222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 23403 - 23481
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||||| | |||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||||||    
T  23403 cttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtc 23481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 24934 - 24856
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| ||| ||| ||||||||| |||||||  ||||||| ||||||||||||| ||| ||  ||||||||||||||    
T  24934 cttaatacatcgtttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtc 24856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 73105 - 73049
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaac 74  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  73105 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaac 73049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 96157 - 96216
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  96157 cttaatacatcatttggtccattaacttattttcgattttcaatttggtcccctaactat 96216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 96934 - 96856
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||| |||||||  ||||||||||||||||  |||||||||||| ||||||||| || ||  || |||||||||||    
T  96934 cttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccctaacaataaactgtctcaatttggtc 96856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 205655 - 205593
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||||||||||||||| | || ||| ||||||||| ||| ||||||||||||||||||||||    
T  205655 gtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtc 205593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1337 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1337
Description:

Target: scaffold1337; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 216
Target Start/End: Original strand, 282 - 428
Alignment:
Q  71 taactattaaacgtttcaatttggtcttttatcttctttccatcattcaatttggtccaattttatccattttaa-cactcnnnnnnnggagatcgttgg 169  Q
    ||||||| ||||| ||||||||| || ||| |||| |||||||||||||||||||||| |||| ||  ||||||| | ||         | || ||||||    
T  282 taactatcaaacgcttcaatttgatcctttttcttgtttccatcattcaatttggtcctatttcattaattttaatctcttaaaaaaatgtgaccgttgg 381  T
Q  170 ataaatgagatctatcaaatctaactatgtatcaccaacatctaatt 216  Q
    ||||||||||||| ||| |||||||  ||||||||||||| ||||||    
T  382 ataaatgagatctgtcatatctaaccgtgtatcaccaacacctaatt 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23869 - 23950
Alignment:
Q  159 gagatcgttggataaatgagatctatcaaatctaactatgtatcaccaacatctaa-ttattttaattttcttcatcttctt 239  Q
    |||||||| | ||||| ||| || |||||||||||| ||||||||||| ||||||| ||||||||  |||||||||||||||    
T  23869 gagatcgtagaataaaagagttccatcaaatctaacaatgtatcaccatcatctaatttattttacatttcttcatcttctt 23950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 747 - 688
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  747 cttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactat 688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 527 - 586
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  527 cttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactat 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 9597 - 9538
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| ||||||| |||||||||||||||||  ||| ||| |||||||||||||||||    
T  9597 cttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactat 9538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 8384 - 8435
Alignment:
Q  26 atcatttagtcccttaacttattttcagttttcaatttggtcccctaactat 77  Q
    ||||||| |||||||||||||||||  ||||||| |||| ||||||||||||    
T  8384 atcatttggtcccttaacttatttttggttttcactttgctcccctaactat 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 56820 - 56741
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||||||| |||||||||||||||||  | ||||| ||||||||||||| ||| ||  || |||||||||||    
T  56820 acttaataaatcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtc 56741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 2368 - 2306
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||  ||||||| ||||||||||||| ||| ||  ||||||||||||||    
T  2368 gtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtc 2306  T

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Target: scaffold2127 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 634 - 557
Alignment:
Q  18 cttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggt 95  Q
    ||||||| |||||||  ||| ||||||||||||  |||||||||| |||||||||||||| ||  || ||||||||||    
T  634 cttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggt 557  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 13306 - 13249
Alignment:
Q  35 tcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaattt 92  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| ||| || |||||||    
T  13306 tcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaattt 13249  T

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Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 11705 - 11781
Alignment:
Q  20 taatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    ||||| ||| ||| |||||||||||||||||   |||||| ||| ||||||||| ||| ||  ||||||||||||||    
T  11705 taatacatcgtttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtc 11781  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 35222 - 35167
Alignment:
Q  197 tgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||||||||||| |||||| ||||  |||| |||||||||||||| |||||||||    
T  35222 tgtatcaccaacacctaattttttttgttttattcatcttcttcctccatcttcat 35167  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 79590 - 79645
Alignment:
Q  197 tgtatcaccaacatctaattattttaattttcttcatcttcttccttcatcttcat 252  Q
    ||||||||||||| |||||| ||||  |||| |||||||||||||| |||||||||    
T  79590 tgtatcaccaacacctaattttttttgttttattcatcttcttcctccatcttcat 79645  T

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Target: scaffold0038 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 25918 - 25997
Alignment:
Q  17 acttaatagatcatttagtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||| ||  ||| ||||||||||||||||||   ||||| ||||||||||||||||| ||  || |||||||||||    
T  25918 acttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 25997  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 1768 - 1830
Alignment:
Q  34 gtcccttaacttattttcagttttcaatttggtcccctaactattaaacgtttcaatttggtc 96  Q
    |||||||||||||||||| | ||||| ||||||||||||| ||| ||  || |||||||||||    
T  1768 gtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtc 1830  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 29082 - 29032
Alignment:
Q  294 aaaatttatcttttcaacttcaacaaaaagcacaaaatcaaacatttaaat 344  Q
    |||||| ||| |||||||||||||||||| |||| |||||||| |||||||    
T  29082 aaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaat 29032  T

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