View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14463_high_7 (Length: 291)
Name: NF14463_high_7
Description: NF14463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14463_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 49765099 - 49765364
Alignment:
| Q |
15 |
actagttaaacaactcattgcaaactttaccagtttggatatatagttccaaaactaaccaacaa---aacataaataatcataagttatttaataagaa |
111 |
Q |
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| T |
49765099 |
actagttaaacaactcattgcaaactttaccagtttggatatatagttccaaaactaaccaacaacaaaacataaataatcataagttatttaataagaa |
49765198 |
T |
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| Q |
112 |
aagnnnnnnnnnnt--catcaacaacttattaaattgcatataaactcaatgatacaagccaaaagtgattctatgtaggtactccgtattgtctctaca |
209 |
Q |
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| T |
49765199 |
aagaaaaaaataatatcatcaacaacttattaaattgcatataaactcaatgatacaagccaaaagtgattctatgtaggtactccgtattgtctctaca |
49765298 |
T |
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| Q |
210 |
ctacccaaacatgtgtatgcatgtgaacaccaccatgaccatagtgtgcattacaataaggtagct |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49765299 |
ctacccaaacatgtgtatgcatgtgaacaccaccatgaccatagtgtgcattacaataaggtagct |
49765364 |
T |
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