View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14463_low_3 (Length: 554)

Name: NF14463_low_3
Description: NF14463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14463_low_3
NF14463_low_3
[»] chr6 (22 HSPs)
chr6 (1-537)||(5627002-5627542)
chr6 (1-153)||(7055248-7055400)
chr6 (1-154)||(1945831-1945985)
chr6 (3-154)||(4318858-4319009)
chr6 (3-153)||(8513232-8513382)
chr6 (1-152)||(7235068-7235218)
chr6 (3-150)||(21017147-21017294)
chr6 (3-152)||(33893038-33893186)
chr6 (3-153)||(3879974-3880124)
chr6 (3-128)||(15491639-15491764)
chr6 (3-150)||(6088910-6089057)
chr6 (1-152)||(33618834-33618985)
chr6 (3-150)||(29182165-29182312)
chr6 (5-149)||(6091220-6091363)
chr6 (3-151)||(20768087-20768233)
chr6 (21-154)||(18498431-18498565)
chr6 (104-154)||(19631747-19631797)
chr6 (88-150)||(30353478-30353540)
chr6 (104-151)||(3005393-3005440)
chr6 (107-154)||(4488589-4488636)
chr6 (104-150)||(6614036-6614082)
chr6 (104-154)||(26301923-26301973)
[»] chr1 (58 HSPs)
chr1 (1-152)||(23999343-23999494)
chr1 (1-150)||(15752027-15752176)
chr1 (3-153)||(18422646-18422796)
chr1 (1-153)||(19899798-19899950)
chr1 (1-151)||(10922724-10922874)
chr1 (3-154)||(32267028-32267179)
chr1 (5-154)||(37618925-37619078)
chr1 (1-155)||(15382926-15383080)
chr1 (1-153)||(30254419-30254570)
chr1 (3-153)||(10182039-10182189)
chr1 (1-152)||(42721035-42721186)
chr1 (1-150)||(46931406-46931558)
chr1 (2-153)||(2959743-2959894)
chr1 (1-154)||(8222125-8222275)
chr1 (1-140)||(28564810-28564949)
chr1 (1-150)||(28769651-28769799)
chr1 (1-136)||(27763340-27763473)
chr1 (5-152)||(30326985-30327132)
chr1 (1-140)||(37451294-37451432)
chr1 (1-123)||(51128884-51129006)
chr1 (3-152)||(38823210-38823359)
chr1 (22-154)||(1547281-1547413)
chr1 (1-152)||(31621582-31621733)
chr1 (1-154)||(16415639-16415793)
chr1 (1-150)||(27563934-27564084)
chr1 (3-154)||(34012408-34012559)
chr1 (3-154)||(48620631-48620782)
chr1 (3-140)||(47279197-47279334)
chr1 (1-160)||(27267228-27267384)
chr1 (3-160)||(27227516-27227665)
chr1 (3-150)||(41926161-41926308)
chr1 (1-151)||(14758038-14758188)
chr1 (3-152)||(3309144-3309292)
chr1 (1-126)||(9903083-9903208)
chr1 (4-152)||(21289661-21289816)
chr1 (1-152)||(47682523-47682673)
chr1 (53-153)||(30254853-30254952)
chr1 (5-115)||(32216088-32216198)
chr1 (3-128)||(27533011-27533136)
chr1 (3-154)||(3534926-3535077)
chr1 (3-154)||(11742382-11742532)
chr1 (3-152)||(7079094-7079254)
chr1 (3-163)||(39393368-39393528)
chr1 (3-150)||(238544-238690)
chr1 (1-150)||(33725629-33725778)
chr1 (75-153)||(25160365-25160442)
chr1 (1-154)||(15168083-15168243)
chr1 (3-120)||(40884841-40884958)
chr1 (1-139)||(4330288-4330428)
chr1 (104-163)||(16132464-16132523)
chr1 (88-154)||(22170748-22170814)
chr1 (107-152)||(47279159-47279204)
chr1 (107-155)||(4150490-4150538)
chr1 (104-152)||(43579242-43579290)
chr1 (1-64)||(25160716-25160779)
chr1 (103-153)||(26970260-26970310)
chr1 (104-154)||(42663785-42663835)
chr1 (104-153)||(13876919-13876968)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-150)||(146050-146199)
[»] chr8 (46 HSPs)
chr8 (1-152)||(10555242-10555393)
chr8 (1-153)||(30654623-30654775)
chr8 (1-153)||(1150145-1150297)
chr8 (5-152)||(23854475-23854622)
chr8 (1-146)||(37970559-37970704)
chr8 (3-154)||(1204924-1205075)
chr8 (1-154)||(16222860-16223013)
chr8 (1-155)||(43643635-43643789)
chr8 (1-152)||(41362517-41362665)
chr8 (1-152)||(6098558-6098709)
chr8 (3-152)||(13307622-13307771)
chr8 (41-153)||(8803890-8803998)
chr8 (1-151)||(31933926-31934076)
chr8 (13-154)||(36695018-36695159)
chr8 (3-160)||(38643969-38644126)
chr8 (8-152)||(12876108-12876252)
chr8 (1-153)||(16446915-16447067)
chr8 (1-153)||(27082878-27083030)
chr8 (1-154)||(34894964-34895117)
chr8 (3-138)||(11727037-11727172)
chr8 (1-150)||(7890997-7891137)
chr8 (13-154)||(9864145-9864286)
chr8 (3-150)||(465843-465990)
chr8 (1-91)||(1149672-1149762)
chr8 (3-152)||(5299988-5300137)
chr8 (87-152)||(15009241-15009306)
chr8 (5-152)||(44869495-44869643)
chr8 (41-161)||(40862409-40862530)
chr8 (28-152)||(4133077-4133199)
chr8 (14-153)||(34952084-34952223)
chr8 (86-151)||(35459823-35459888)
chr8 (67-154)||(24823378-24823465)
chr8 (104-150)||(35735984-35736030)
chr8 (66-152)||(33906223-33906309)
chr8 (5-79)||(39099163-39099237)
chr8 (3-152)||(41911030-41911179)
chr8 (104-156)||(5018006-5018058)
chr8 (107-153)||(1835392-1835438)
chr8 (107-153)||(1879233-1879279)
chr8 (104-154)||(4108912-4108962)
chr8 (104-146)||(23176763-23176805)
chr8 (1-63)||(35459751-35459813)
chr8 (112-153)||(7998361-7998402)
chr8 (117-154)||(39099265-39099302)
chr8 (8-75)||(1954036-1954104)
chr8 (104-156)||(34685733-34685785)
[»] chr7 (48 HSPs)
chr7 (1-151)||(24211717-24211867)
chr7 (1-151)||(38258521-38258671)
chr7 (1-152)||(7334769-7334920)
chr7 (1-152)||(37109847-37109998)
chr7 (1-154)||(18797302-18797453)
chr7 (1-154)||(17842621-17842774)
chr7 (1-152)||(27283719-27283870)
chr7 (1-154)||(30055499-30055653)
chr7 (1-154)||(12390665-12390818)
chr7 (1-153)||(31579099-31579256)
chr7 (1-156)||(32821088-32821243)
chr7 (1-154)||(10481576-10481731)
chr7 (5-158)||(5657520-5657673)
chr7 (19-152)||(37346997-37347130)
chr7 (3-151)||(48928601-48928748)
chr7 (3-153)||(21991610-21991760)
chr7 (1-155)||(23111162-23111316)
chr7 (3-152)||(4582894-4583043)
chr7 (3-136)||(48928334-48928466)
chr7 (1-152)||(31520759-31520909)
chr7 (1-154)||(9355861-9356014)
chr7 (5-152)||(8861260-8861407)
chr7 (5-154)||(22687215-22687361)
chr7 (3-154)||(26524364-26524515)
chr7 (3-150)||(27421417-27421563)
chr7 (5-150)||(11071182-11071328)
chr7 (3-153)||(43686015-43686164)
chr7 (3-152)||(6546494-6546643)
chr7 (3-152)||(15612796-15612944)
chr7 (14-139)||(29173528-29173653)
chr7 (1-154)||(41765113-41765266)
chr7 (41-120)||(38053493-38053572)
chr7 (4-150)||(44413417-44413564)
chr7 (3-152)||(12165727-12165876)
chr7 (5-150)||(25691583-25691729)
chr7 (3-153)||(32432431-32432576)
chr7 (3-151)||(33688299-33688446)
chr7 (1-152)||(10359250-10359400)
chr7 (3-125)||(26980325-26980447)
chr7 (104-152)||(8133561-8133609)
chr7 (104-154)||(40381938-40381988)
chr7 (1-115)||(35353120-35353235)
chr7 (107-153)||(241024-241070)
chr7 (46-152)||(34362228-34362334)
chr7 (97-150)||(8299192-8299245)
chr7 (104-152)||(23402371-23402419)
chr7 (104-150)||(3953733-3953779)
chr7 (59-152)||(37704143-37704236)
[»] chr4 (61 HSPs)
chr4 (5-154)||(34361556-34361704)
chr4 (1-154)||(32912640-32912793)
chr4 (1-152)||(19089513-19089664)
chr4 (1-153)||(37663801-37663951)
chr4 (1-153)||(42199728-42199880)
chr4 (1-154)||(55477951-55478108)
chr4 (1-154)||(50697240-50697392)
chr4 (1-153)||(25184112-25184264)
chr4 (1-152)||(19440708-19440860)
chr4 (3-150)||(27396618-27396765)
chr4 (1-154)||(25701117-25701270)
chr4 (1-150)||(36493748-36493897)
chr4 (1-153)||(879608-879760)
chr4 (3-152)||(49375966-49376116)
chr4 (1-154)||(38011852-38012005)
chr4 (1-149)||(6864038-6864186)
chr4 (67-154)||(4396324-4396411)
chr4 (8-154)||(29584267-29584411)
chr4 (3-150)||(34948159-34948306)
chr4 (45-154)||(3042609-3042718)
chr4 (5-154)||(35021099-35021248)
chr4 (3-151)||(37775670-37775816)
chr4 (1-152)||(28003046-28003197)
chr4 (41-152)||(39397918-39398029)
chr4 (1-154)||(9139245-9139396)
chr4 (67-152)||(53124287-53124372)
chr4 (3-135)||(23761089-23761221)
chr4 (22-150)||(47253751-47253878)
chr4 (22-152)||(7703517-7703647)
chr4 (41-153)||(37287732-37287845)
chr4 (3-151)||(4597994-4598141)
chr4 (3-138)||(50764746-50764879)
chr4 (47-154)||(4205114-4205221)
chr4 (13-152)||(55241176-55241315)
chr4 (41-150)||(17167715-17167824)
chr4 (41-150)||(17173292-17173401)
chr4 (3-139)||(32592106-32592242)
chr4 (70-155)||(7152235-7152320)
chr4 (41-154)||(30002724-30002837)
chr4 (3-127)||(54499300-54499425)
chr4 (22-153)||(35025669-35025800)
chr4 (88-154)||(17272009-17272075)
chr4 (86-152)||(46884179-46884245)
chr4 (1-138)||(5048025-5048162)
chr4 (3-150)||(33341397-33341547)
chr4 (94-150)||(52516599-52516655)
chr4 (104-154)||(38812260-38812310)
chr4 (104-154)||(54995799-54995849)
chr4 (103-152)||(28293236-28293285)
chr4 (5-122)||(46888221-46888338)
chr4 (98-151)||(51204580-51204633)
chr4 (1-115)||(4934262-4934375)
chr4 (98-150)||(20097485-20097537)
chr4 (103-154)||(47073656-47073707)
chr4 (1-154)||(32579442-32579597)
chr4 (3-136)||(33816595-33816728)
chr4 (104-152)||(38811813-38811861)
chr4 (104-154)||(2704510-2704560)
chr4 (104-154)||(49878634-49878683)
chr4 (107-152)||(37793380-37793425)
chr4 (87-152)||(53337559-53337624)
[»] chr2 (49 HSPs)
chr2 (1-153)||(11366433-11366585)
chr2 (1-152)||(33551038-33551189)
chr2 (3-152)||(37905709-37905857)
chr2 (1-153)||(17071789-17071941)
chr2 (5-154)||(29242194-29242343)
chr2 (1-152)||(33902068-33902217)
chr2 (1-119)||(43648297-43648415)
chr2 (1-154)||(19289375-19289523)
chr2 (41-152)||(35958909-35959020)
chr2 (2-153)||(17054149-17054300)
chr2 (3-154)||(4166920-4167071)
chr2 (3-154)||(31570788-31570939)
chr2 (3-153)||(19424682-19424832)
chr2 (3-152)||(19313852-19314000)
chr2 (3-151)||(13711465-13711613)
chr2 (14-153)||(4264142-4264281)
chr2 (3-150)||(36641988-36642135)
chr2 (3-150)||(43770893-43771039)
chr2 (3-152)||(26357577-26357726)
chr2 (3-154)||(39167417-39167568)
chr2 (3-150)||(41463904-41464051)
chr2 (3-152)||(4478368-4478518)
chr2 (21-154)||(2325442-2325575)
chr2 (13-150)||(3176941-3177078)
chr2 (6-150)||(33660425-33660569)
chr2 (3-153)||(27349993-27350143)
chr2 (5-152)||(4763628-4763778)
chr2 (88-154)||(41960881-41960947)
chr2 (13-154)||(18494344-18494473)
chr2 (97-152)||(41465509-41465564)
chr2 (104-154)||(6177773-6177823)
chr2 (3-120)||(33709286-33709403)
chr2 (105-162)||(43446463-43446520)
chr2 (104-152)||(31861895-31861943)
chr2 (3-153)||(5881533-5881688)
chr2 (3-152)||(44913662-44913812)
chr2 (104-154)||(34441921-34441971)
chr2 (104-150)||(41643874-41643920)
chr2 (1-55)||(45327817-45327871)
chr2 (5-150)||(44285951-44286096)
chr2 (104-152)||(22963400-22963448)
chr2 (104-152)||(22998029-22998077)
chr2 (1-53)||(41960939-41960991)
chr2 (110-153)||(7007051-7007094)
chr2 (104-151)||(42005390-42005437)
chr2 (104-154)||(19093411-19093461)
chr2 (107-153)||(39788580-39788626)
chr2 (7-52)||(41051263-41051308)
chr2 (104-152)||(18514771-18514819)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-150)||(7889-8038)
[»] chr3 (60 HSPs)
chr3 (1-154)||(47481511-47481664)
chr3 (1-153)||(26941294-26941446)
chr3 (3-153)||(3655238-3655388)
chr3 (1-152)||(51213015-51213166)
chr3 (5-153)||(40552297-40552445)
chr3 (1-154)||(21009836-21009992)
chr3 (1-154)||(48354930-48355083)
chr3 (1-152)||(20373330-20373481)
chr3 (1-152)||(37203058-37203209)
chr3 (1-152)||(54505799-54505949)
chr3 (3-152)||(4015451-4015600)
chr3 (3-154)||(35844315-35844466)
chr3 (3-140)||(29099358-29099495)
chr3 (5-150)||(46297800-46297945)
chr3 (1-154)||(4761683-4761838)
chr3 (3-153)||(7327518-7327669)
chr3 (1-154)||(11357398-11357555)
chr3 (14-149)||(22446111-22446247)
chr3 (1-106)||(42506109-42506214)
chr3 (1-152)||(3362243-3362395)
chr3 (3-154)||(21193595-21193746)
chr3 (1-152)||(37157699-37157849)
chr3 (3-153)||(52040958-52041109)
chr3 (1-154)||(22450957-22451110)
chr3 (13-154)||(34132924-34133065)
chr3 (1-152)||(27480413-27480564)
chr3 (3-153)||(11466814-11466964)
chr3 (5-153)||(44186539-44186687)
chr3 (72-156)||(46994756-46994839)
chr3 (3-139)||(40935995-40936131)
chr3 (1-154)||(33378819-33378969)
chr3 (5-150)||(43975926-43976068)
chr3 (1-150)||(54828735-54828883)
chr3 (3-152)||(45174494-45174645)
chr3 (3-154)||(24488998-24489148)
chr3 (1-154)||(39282642-39282794)
chr3 (66-152)||(44891498-44891583)
chr3 (98-151)||(11835737-11835790)
chr3 (104-156)||(40640634-40640686)
chr3 (3-70)||(53176127-53176194)
chr3 (67-109)||(41585407-41585449)
chr3 (1-150)||(53229186-53229336)
chr3 (84-154)||(55343401-55343471)
chr3 (3-112)||(2007964-2008073)
chr3 (62-138)||(2613895-2613971)
chr3 (104-152)||(53811976-53812024)
chr3 (1-150)||(24708151-24708295)
chr3 (3-81)||(14586706-14586784)
chr3 (104-154)||(38392628-38392678)
chr3 (95-151)||(29163839-29163895)
chr3 (104-152)||(49359628-49359676)
chr3 (104-151)||(19606914-19606961)
chr3 (68-152)||(33698183-33698263)
chr3 (107-154)||(48155220-48155267)
chr3 (104-154)||(42665541-42665591)
chr3 (110-151)||(43348281-43348322)
chr3 (104-153)||(45879498-45879547)
chr3 (117-153)||(18272236-18272272)
chr3 (1-57)||(46994695-46994751)
chr3 (104-152)||(47930666-47930714)
[»] chr5 (58 HSPs)
chr5 (1-155)||(22255178-22255333)
chr5 (1-154)||(5112337-5112490)
chr5 (1-154)||(24886100-24886255)
chr5 (3-154)||(30969350-30969501)
chr5 (1-151)||(31705636-31705785)
chr5 (1-150)||(699152-699301)
chr5 (1-150)||(27318511-27318660)
chr5 (1-155)||(12910347-12910506)
chr5 (1-150)||(7208888-7209037)
chr5 (1-153)||(17158055-17158209)
chr5 (1-154)||(22974106-22974259)
chr5 (1-153)||(1429169-1429321)
chr5 (3-154)||(19119857-19120008)
chr5 (1-154)||(38528261-38528413)
chr5 (14-154)||(36860421-36860561)
chr5 (3-150)||(26268076-26268223)
chr5 (5-154)||(14919556-14919706)
chr5 (1-151)||(22980794-22980944)
chr5 (16-154)||(35826522-35826660)
chr5 (3-153)||(39572818-39572968)
chr5 (3-152)||(15724490-15724637)
chr5 (3-152)||(36866762-36866911)
chr5 (19-152)||(5829897-5830034)
chr5 (3-154)||(8741912-8742064)
chr5 (3-150)||(5837557-5837704)
chr5 (1-152)||(14409351-14409501)
chr5 (8-154)||(27330304-27330448)
chr5 (1-152)||(31786670-31786821)
chr5 (6-152)||(7693230-7693376)
chr5 (3-153)||(9200232-9200382)
chr5 (67-152)||(26317774-26317859)
chr5 (3-152)||(40133385-40133534)
chr5 (3-151)||(32563150-32563298)
chr5 (5-140)||(43308680-43308815)
chr5 (3-150)||(25500952-25501099)
chr5 (1-152)||(35511501-35511652)
chr5 (59-154)||(13956427-13956522)
chr5 (14-152)||(21088803-21088941)
chr5 (5-152)||(23116250-23116397)
chr5 (3-154)||(8466743-8466893)
chr5 (1-140)||(33908245-33908384)
chr5 (3-152)||(22019632-22019781)
chr5 (15-150)||(11898004-11898139)
chr5 (32-153)||(8436965-8437086)
chr5 (86-152)||(16004485-16004552)
chr5 (68-119)||(22255608-22255659)
chr5 (3-73)||(15992566-15992636)
chr5 (67-138)||(5748442-5748520)
chr5 (3-115)||(25668687-25668798)
chr5 (3-151)||(28416553-28416696)
chr5 (97-153)||(35933901-35933957)
chr5 (102-153)||(12164914-12164965)
chr5 (104-154)||(22616492-22616542)
chr5 (86-151)||(35504168-35504236)
chr5 (107-152)||(26411293-26411338)
chr5 (1-90)||(35504427-35504516)
chr5 (104-151)||(21320752-21320799)
chr5 (3-81)||(6824505-6824585)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-150)||(43959-44108)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-150)||(154679-154828)
[»] scaffold0002 (4 HSPs)
scaffold0002 (3-153)||(133-283)
scaffold0002 (1-126)||(94417-94542)
scaffold0002 (100-155)||(408702-408757)
scaffold0002 (1-98)||(408463-408559)
[»] scaffold0009 (2 HSPs)
scaffold0009 (61-153)||(42347-42439)
scaffold0009 (87-154)||(100819-100886)
[»] scaffold0318 (1 HSPs)
scaffold0318 (3-150)||(11908-12058)
[»] scaffold0262 (1 HSPs)
scaffold0262 (103-152)||(12137-12186)


Alignment Details
Target: chr6 (Bit Score: 499; Significance: 0; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 1 - 537
Target Start/End: Complemental strand, 5627542 - 5627002
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5627542 agtcttgttaacctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 5627443  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaa---ttatagaaagaatcctaatgcttaaaaaggaaatattga 197  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  5627442 gtgttaacttcaccaaaaaagtcattcttatgacttcaccttagaattttccttcaaaaaattatagaaagaatcctaatgcttaaaaaggaaatattga 5627343  T
Q  198 aaatgagagaaaaataaagatgttttgatcatttgactagttttggacataaatattttgcatgggactcacgtttctagtatttt-catttctatttta 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5627342 aaatgagagaaaaataaagatgttttgatcatttgactagttttggacataaatattttgcatgggactcacgtttctagtatttttcatttctatttta 5627243  T
Q  297 tccataccaaatttcacctcaagtaaacaaatttaactctcttttcttcttcagtgaggttgttggtaaatatacacaagaactcaacaaattgggacat 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5627242 tccataccaaatttcacctcaagtaaacaaatttaactctcttttcttcttcagtgaggttgttggtaaatatacacaagaactcaacaaattgggacat 5627143  T
Q  397 gaaattttggagatgctttgtgaagggttagggcttaaaccagaatatttcattggtgaacttagtgaaaatccagtaatactaggtcatcactttcctc 496  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5627142 gaaattttggagatgctttgtgaagggttagggcttaaactagaatatttcattggtgaacttagtgaaaatccagtaatactaggtcatcactttcctc 5627043  T
Q  497 cttgccctgaaccaagtttaactttgggcctagccaaacat 537  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  5627042 cttgtcctgaaccaagtttaactttgggcctagccaaacat 5627002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 7055248 - 7055400
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  7055248 agtcttgttaacctgatgaattgatgatactatgagggctgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttata 7055347  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  7055348 gtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaattttcct 7055400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 1945985 - 1945831
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||| ||||||||| || ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  1945985 agtcttgttaacttgatgaattcatgatactatgagggctgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttata 1945886  T
Q  101 gtgttaacttcaccaa-aaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1945885 gtgttaacttcaccaaaaaaagtcattcttatgacttcaccgtagaattttcctt 1945831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 4318858 - 4319009
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| || |||||||||| |||||||| ||   ||||||||||||||| | |||||| ||||||||||||||||| | | |||| ||||||||||    
T  4318858 tcttgttaatctaatgaattgatgatactatgggggttgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagt 4318957  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  4318958 gttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcctt 4319009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 8513382 - 8513232
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||| |||| || | ||||||||||||||| | |||||| ||||||||||||||||  | | |||| || |||||||    
T  8513382 tcttgttaatatgatgaattgatgatattatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagt 8513283  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  8513282 gttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcct 8513232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 7235068 - 7235218
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||   |||||| ||||||||| |||||| || | |||| ||||||||    
T  7235068 agtcttgttaatctgatgaattgataatactatgaga-ctgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttata 7235166  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| ||||||||  |||||||||||| || |||||||| |||||||||||    
T  7235167 gtgttgacttcaccggaaaagtcattctcataacttcaccatagaattttcc 7235218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 21017147 - 21017294
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||||| |||||||| || | |||||||||||| |||| |||||||| ||||||||||||||  | |||||||||  || | |    
T  21017147 tcttgttagtctgatgaattgatgatactatggggactgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaat 21017246  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||||||||||||| |  ||||||||||||| ||||||    
T  21017247 gttaacttcaccaaaaaagtcattttcgtgacttcaccgtataatttt 21017294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 33893038 - 33893186
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||| | || | |||||||| || ||||| |||||||||||||||||||||||  | | |||| ||||||||||    
T  33893038 tcttgttaatctgatgaattgatgatactaag-ggactgaacttttaatatcattgtacaaatagtggggtgttactcacaacacttttgatgttatagt 33893136  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||| |||||| | ||||| ||||||| ||| |||||||||||    
T  33893137 gttaacttcactaaaaaaattattctaatgactttaccatagaattttcc 33893186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 3879974 - 3880124
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||||| |||||||| ||   ||||||||||||||||| |||||| ||| ||||||||||||  | | |||| ||  |||| |    
T  3879974 tcttgttagtctgatgaattgatgatactatggggattgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataat 3880073  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||| ||||||||||||  |||||||||| ||||||||||||    
T  3880074 gttaacttcaccagaaaagtcattctcgtgacttcaccatagaattttcct 3880124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 15491764 - 15491639
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| | |||||||||||| || | |||||||||||||||||||||||  | | |||| |||||| | |    
T  15491764 tcttgttaatctgatgaattgatgatactatgagggctgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaat 15491665  T
Q  103 gttaacttcaccaaaaaagtcattct 128  Q
    ||||||||||| | ||||||||||||    
T  15491664 gttaacttcacgagaaaagtcattct 15491639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 6089057 - 6088910
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||  | | |||||||||||| || | |||||| ||||||| ||||||||  | | |||| ||  ||||||    
T  6089057 tcttgttaatctgatgaattgatgatactatggtgactgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagt 6088958  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||| |||| ||||||| ||||||||||| |||||||||    
T  6088957 gttaacttcaccagaaaaatcattctcatgacttcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 33618985 - 33618834
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||  | |||||||||||| ||   |||||||| |||| || |||||| || | |||| |||  |||    
T  33618985 agtcttgttaatctgatgaattgatgatactatgagaactgaacttttgatgccaccgtacaaataatgggttgctactcactacacttttgatgcgata 33618886  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| ||||||||| ||||||  |||  |||||||||||||||||||||||    
T  33618885 gtgttgacttcaccagaaaagtatttcccatgacttcaccgtagaattttcc 33618834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 29182312 - 29182165
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||| |||| ||||||||||||| ||| ||||  | | |||||||||||| || | || ||| ||||||||||||||||  | | |||| ||||||||||    
T  29182312 tcttattaatctgatgaattgatgataatatggagactgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagt 29182213  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||| ||| ||| ||||||| ||||||||||| || ||||||    
T  29182212 gttaacttcatcaataaaatcattctcatgacttcaccataaaatttt 29182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 6091220 - 6091363
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| || |||||||||| |||||| |||  | |||||||||||| |||| |||||| | ||| |||||||||| || ||||||||||||| | |||    
T  6091220 ttgttaatctaatgaattgatgatactacgagtactgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgttaca-tgt 6091318  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattt 149  Q
    |||||| ||||||||| | ||| | ||||||||||  ||||||||    
T  6091319 taactttaccaaaaaaattattttcatgacttcacaatagaattt 6091363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 20768233 - 20768087
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| |||||||||| || ||||||||||| | |||||||||||| || |  ||||| | |||  || |||||| || | |||| ||| ||||||    
T  20768233 tcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgccacta-acaaacaatgga-tgctactcactacacttttgatgctatagt 20768136  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||| ||||||||| |||||||||||| ||||||||||| ||||||||||    
T  20768135 gttgacttcaccagaaaagtcattctcatgacttcaccatagaattttc 20768087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 18498565 - 18498431
Alignment:
Q  21 ttgataatactatgaggtcagaacttttgatgtcattctacaaatagtgggg-tgttactcattatattttttatgttatagtgttaacttcaccaaaaa 119  Q
    ||||| ||||||||||| | |||||||||||| || | ||||||  |||||| |||| |||| || | |||| ||| |||| ||||||||||||||  ||    
T  18498565 ttgatgatactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaa 18498466  T
Q  120 agtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||| ||||||||||  |||| ||||||||    
T  18498465 agtcattctcatgacttcactatagatttttcctt 18498431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 19631797 - 19631747
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttcctt 19631747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 30353478 - 30353540
Alignment:
Q  88 tttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||| |||||||| |||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  30353478 ttttgatgttataatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 3005393 - 3005440
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||||||||    
T  3005393 ttaacttcatcaaaaaagtcattctcatgacttcaacatagaattttc 3005440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 4488589 - 4488636
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||| | | |||||||||||||||||| ||||    
T  4488589 acttcaccaaaaaagtcattttaacgacttcaccgtagaatttccctt 4488636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 6614036 - 6614082
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||| ||||||||||||||||| |||||| || ||||||    
T  6614036 ttaacttcaccagaaaagtcattcttatgatttcaccatataatttt 6614082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 26301923 - 26301973
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||| |||||| ||||| ||||||||||||| || ||||||||||    
T  26301923 ttaacttcacgaaaaaaatcatttttatgacttcaccatataattttcctt 26301973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 23999494 - 23999343
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  23999494 agtcttgttaacctgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgta 23999395  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  23999394 gtgttaacttcaccaaaaaaatcattcttatgacttcaccataaaattttcc 23999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15752176 - 15752027
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||| | |||||||||||| |||| |||||| |||| ||||||||||| ||||||||||||||||||    
T  15752176 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttata 15752077  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  15752076 gtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 18422796 - 18422646
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||| ||||||| | ||||||||||||||||| ||||||  |||||||||||||| |||||||||| ||||||||||    
T  18422796 tcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagt 18422697  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18422696 gttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcct 18422646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 19899798 - 19899950
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||| |||||||||||   |||||||||||| ||||||||||| |||| |||||||||| ||| |||||| ||||||||    
T  19899798 agtcttgttaacctgatgaattgatgatactatgagggttgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttata 19899897  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  19899898 gtgttaacttcaccaaaaaaatcattattatgacttcaccatagaattttcct 19899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10922874 - 10922724
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| |||||||||||   ||||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||    
T  10922874 agtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttata 10922775  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||||||||||||||| ||||||| |||| |||||| || |||||||    
T  10922774 gtgttaacttcaccaaaaaaatcattctcatgatttcaccataaaattttc 10922724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 32267179 - 32267028
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||  ||||| ||| |||||||   ||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||| |    
T  32267179 tcttgttaatctgatgggttgatgataatatgaggagtgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatatt 32267080  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||    
T  32267079 gttaacttcacaaaaaaagtcattcttatgacttcaccataaaattttcctt 32267028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 37618925 - 37619078
Alignment:
Q  5 ttgttaacctgatgaattgataata--ctatgaggtcagaacttttgatgtcattctacaaatagtggggtgtt--actcattatattttttatgttata 100  Q
    ||||||| ||||||||||||| |||  |||||||  | ||||||||||||||||| |||||| |||||||||||  |||||||| |||||| ||||||||    
T  37618925 ttgttaatctgatgaattgatgatatactatgagaactgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttata 37619024  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  37619025 gtgttaacttcaccaaaaaagtcattcttataacttcaccatagaattttcctt 37619078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 15383080 - 15382926
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||| || | | |||||||||||| |||| ||||||  ||||| |||||||||||| |||||| ||||||||    
T  15383080 agtcttgttaatctgatgaattgatgatactacgatgactgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttata 15382981  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    ||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||    
T  15382980 gtgttaatttcaccaaaaaagtcatttttataacttcaccatagaattttccttc 15382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 30254570 - 30254419
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||| ||||| | ||||||||||||||||| |||||| |||| | | |||||||||| |||||| ||||||||    
T  30254570 agtcttgttaatctgatgaattgatgatactttgaggactgaacttttgatgtcattgtacaaacagtgtg-tattactcattacatttttgatgttata 30254472  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
     ||||||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  30254471 ttgttaacttcaacaaaaaagtcattcttataacttcaccatagaattttcct 30254419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 10182039 - 10182189
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||  ||||||||||| | |||||||||||| || | |||||| ||||| ||||||| || |||||||||||||||| |||    
T  10182039 tcttgttaatctgatgaattgacgatactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagt 10182138  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
     ||||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  10182139 tttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcct 10182189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 42721186 - 42721035
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||||| ||   ||||||||||||| | | |||||| |||||||||||||||| ||||||||||||| ||||    
T  42721186 agtcttgttaatctgatgaattgatgatactatggggattgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatata 42721087  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    | | |||||||||||||||| ||||| | ||||||||||| |||||||||||    
T  42721086 gggctaacttcaccaaaaaaatcattttcatgacttcaccatagaattttcc 42721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 46931558 - 46931406
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||| ||| ||||||| | ||| |||||||| | ||||||||| |||||||| |||||||||| |||||| ||||||||    
T  46931558 agtcttgttaacctgatgaattgatgatattatgagggctgaatttttgatgccgttctacaaacagtggggtattactcattacatttttgatgttata 46931459  T
Q  101 gtgttaacttcac---caaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||    |||||| |||||||||| |||||||| |||||||||    
T  46931458 gtgttaacttcacaaaaaaaaaattcattcttataacttcaccatagaatttt 46931406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 2959894 - 2959743
Alignment:
Q  2 gtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatag 101  Q
    |||||||||| ||||||||||||| | ||||||||| | ||||||||||||||| | |||||| |||||| ||||||| | || | |||| |||||||||    
T  2959894 gtcttgttaatctgatgaattgatgacactatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatag 2959795  T
Q  102 tgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||| || |||||||||| | ||||||||||| ||||||||||||    
T  2959794 tgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttcct 2959743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8222275 - 8222125
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||||||||  | |||||||||||| |||| ||   |  ||| |||||||||||||| |||||| ||||||||    
T  8222275 agtcttgttaatatgatgaattgatgatactatgagaactgaacttttgatgccattgta---acggtgtggtgttactcattacatttttgatgttata 8222179  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  8222178 gtgttaacttcactaaaaaggtcatttttatgacttcaccgtagaattttcctt 8222125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28564810 - 28564949
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||||||||| | ||||||||||||||||| |||||| |||  |||||||||||||| |||||| ||||||||    
T  28564810 agtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttata 28564909  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    |||||||||||| ||||||| ||||| | || ||||||||    
T  28564910 gtgttaacttcatcaaaaaaatcattttcataacttcacc 28564949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 28769799 - 28769651
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||||||||| | |||| ||||||| |||| ||||||  ||||| |||||||||||| |||||| |||| |||    
T  28769799 agtcttgttaatatgatgaattgatgatactatgaggaccgaacctttgatgccattgtacaaacggtggg-tgttactcattacatttttgatgtcata 28769701  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||| |||||||| ||| ||||||||||||| |||||||||    
T  28769700 gtgttaacttcacaaaaaaagttatttttatgacttcaccatagaatttt 28769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 27763340 - 27763473
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||| ||||||| ||||||||||| | | ||||||||||||||||||||||   | ||||||||||||||| |||||| ||||||||    
T  27763340 agtcttgttaacctgataaattgatgatactatgagggctggacttttgatgtcattctacaaactat-gggtgttactcattacatttttgatgttata 27763438  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgactt 136  Q
    |||||||||||| ||||||| |||||||||| ||||    
T  27763439 gtgttaacttca-caaaaaaatcattcttataactt 27763473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 30326985 - 30327132
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||||||||| ||||||||| | | ||||||||||||  ||| ||||||  || |||| |||||||||| |||||| ||||||||||||    
T  30326985 ttgttaatctgatgaattgatgatactatgatgactgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgt 30327084  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||| ||||| |||||||||||| ||||||||||||  |||||||||||    
T  30327085 taaattcacaaaaaaagtcatttttatgacttcactatagaattttcc 30327132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 37451432 - 37451294
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||| ||||||| |||||| |||| | ||||||||||||||||| ||||||  || |||||||||| |||| |||||| ||||||||    
T  37451432 agtcttgttaatatgataaattgatgatacta-gaggactgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttata 37451334  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  37451333 gtgttaactttaccaaaaaagtcatttttatgacttcacc 37451294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 51129006 - 51128884
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||||| | | | ||||||||||||||||| ||||||  |||| ||||||||||||| |||||||||||||||    
T  51129006 agtcttgttaatatgatgaattgatgatactataatgactgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttata 51128907  T
Q  101 gtgttaacttcaccaaaaaagtc 123  Q
    ||||||||||||| |||||||||    
T  51128906 gtgttaacttcactaaaaaagtc 51128884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 38823359 - 38823210
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||| ||   |||||||||||| || | ||||||||||||||||||||||   | | |||| ||| ||||||    
T  38823359 tcttgttaatctgatgaattgatgatactatggggattgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagt 38823260  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||| |||| |||||||||||| ||||||||||| |||||||||||    
T  38823259 gttaacttaaccagaaaagtcattctcatgacttcaccatagaattttcc 38823210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 1547413 - 1547281
Alignment:
Q  22 tgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaag 121  Q
    |||| ||||||||||  | |||||||||||| || |  ||||| ||||| ||||||||||  | |||||||||||||||||||||||||||||| |||||    
T  1547413 tgatgatactatgagaactgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaag 1547314  T
Q  122 tcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||| ||||||||||| |||||||||||||    
T  1547313 tcattctcatgacttcaccatagaattttcctt 1547281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31621582 - 31621733
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||||| || | ||| |||||||| ||   ||||||||| |||||| |||||| || |  ||| ||||||||    
T  31621582 agtcttgttaatctgatgaattgatgatactatggggactgaatttttgatgccaccgtacaaatagcggggtgctactcaatacacctttgatgttata 31621681  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| ||||||| | |||||||||||| |||||||||||||||||||||||    
T  31621682 gtgttgacttcactagaaaagtcattctcatgacttcaccgtagaattttcc 31621733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 16415793 - 16415639
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtg-gggtgttactcattatattttttatgttat 99  Q
    ||||||||||| || |||||||||| ||||||||| | | |||||||||||| || | |||||| | |  |||||||||||| || | |||| ||| |||    
T  16415793 agtcttgttaatctaatgaattgatgatactatgatggctgaacttttgatgccactgtacaaacatttagggtgttactcactacacttttgatgctat 16415694  T
Q  100 agtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  16415693 agtgttaacttcaccagaaaagtcattctcatgacttcaccttagaattttcctt 16415639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 27563934 - 27564084
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||||||| |||  |  | ||||||||||||||| | |||||| ||||| |||||||||| ||||||||| | ||||||    
T  27563934 agtcttgttaatctgatgaattgataatattatcggaactgaacttttgatgtcactatacaaacagtggagtgttactcactatatttttaaagttata 27564033  T
Q  101 gtgttaacttcac-caaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  27564034 gtgttaacttcactaaaaaaaatcattttcataacttcaccgtagaatttt 27564084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 34012408 - 34012559
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||| ||||| | | |||||||||||| || | |||||| ||||| |||||||||| || | | || ||||||||||    
T  34012408 tcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagt 34012507  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||| || ||| |||||| | ||||||||||| |||||||||||||    
T  34012508 gttaacttcatcataaacgtcattttcatgacttcaccatagaattttcctt 34012559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 48620782 - 48620631
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||| | || | ||||||||||||||| | |||||| ||||||||||||||||  | | |||| |||||||| |    
T  48620782 tcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatatt 48620683  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||| | |||||||||| | || |||||| | |||||||||||||    
T  48620682 gttaacttcacaagaaaagtcattttaataacttcaacatagaattttcctt 48620631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 47279334 - 47279197
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||| |||| || | |||||| ||||||||||||||||  | | |||| ||  |||| |    
T  47279334 tcttgttaatctgatgaattgatgatactatgaggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataat 47279235  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  47279234 gttaacttcaccaaaaaaatcattctcatgacttcacc 47279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 27267228 - 27267384
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||  | | |||||||| ||| || | |||||| |||||||||| ||||| || ||||||||||   ||    
T  27267228 agtcttgttaatctgatgaattgatgatactatggagactgaacttttaatgccactgtacaaacagtggggtgtcactcactacattttttatg--cta 27267325  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaatt 160  Q
    |||||||||||||||||||| ||||||| ||||||||| | || |||||||| |||||||    
T  27267326 gtgttaacttcaccaaaaaaatcattctcatgacttca-catataattttccatcaaatt 27267384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 27227516 - 27227665
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| | |||||||||||| || | |||||| |||| ||||      | || |||||||||| ||  ||    
T  27227516 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtgaggtg------agtacattttttatgcta--gt 27227607  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaatt 160  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||    
T  27227608 gttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttccatcaaatt 27227665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 41926308 - 41926161
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||  || | |||||| ||||| || | |||||| |||||| | ||||||| ||||||||| ||||||||||    
T  41926308 tcttgttaatctgatgaattgatgatactatagggactgaacttgtgatgccactgtacaaacagtgggatattactcactatatttttgatgttatagt 41926209  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
     ||||||||| ||||||| ||||| | || |||||||| |||||||||    
T  41926208 attaacttcatcaaaaaaatcattttcataacttcaccatagaatttt 41926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14758188 - 14758038
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| || |||||||||| | |||||| || | |||||||||||| ||   |||||| ||| | ||| |||||| || | |||| ||||||||    
T  14758188 agtcttgttaatctaatgaattgatgaaactatggggactgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttata 14758089  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||| ||||||||| |||||||||||| |||||||||||||| |||||||    
T  14758088 gtgttgacttcaccagaaaagtcattctcatgacttcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 3309292 - 3309144
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||| |   |||||||||||  || | |||||| |||||| |||||||||  | | |||| ||||||||||    
T  3309292 tcttgttaatctgatgaattgatgatactatgaagattgaacttttgataccactgtacaaacagtggg-tgttactcacaacacttttgatgttatagt 3309194  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||| |||| |||||||||||| ||||||| ||| |||||||||||    
T  3309193 gttaactttaccagaaaagtcattctcatgactttaccatagaattttcc 3309144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 9903083 - 9903208
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||| |||| ||   ||||||||||||||| | |||||| || ||||||||||||| || | |||| ||||||||    
T  9903083 agtcttgttaatttgatgaattgatgatagtatgtggattgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttata 9903182  T
Q  101 gtgttaacttcaccaaaaaagtcatt 126  Q
    |||||||||||| |||||||||||||    
T  9903183 gtgttaacttcatcaaaaaagtcatt 9903208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 21289816 - 21289661
Alignment:
Q  4 cttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactca-------ttatattttttatgt 96  Q
    |||||||| ||||||||||||| |||||||  || | |||||||||||| || | |||||| ||||||||||||||||       || |||| ||||||     
T  21289816 cttgttaatctgatgaattgatgatactatagggactgaacttttgatgccactgtacaaacagtggggtgttactcactacattttttattatttatga 21289717  T
Q  97 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||||||||| |||||||||||| ||||||||||  |||| ||||||    
T  21289716 tatagtgttaacttcaccagaaaagtcattctcatgacttcacaatagatttttcc 21289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 47682523 - 47682673
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggg-gtgttactcattatattttttatgttat 99  Q
    ||||||||||| ||||||||||||| |||||||||||   |||||||||||  || | |||||  |||||| ||||||||||  | |||||||||| ||     
T  47682523 agtcttgttaatctgatgaattgatgatactatgaggaatgaacttttgataccactgtacaagcagtgggagtgttactcacaacattttttatgcta- 47682621  T
Q  100 agtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
     |||||||||||||||||||||||| ||| ||||||||||| || ||||||||    
T  47682622 -gtgttaacttcaccaaaaaagtcactctcatgacttcaccataaaattttcc 47682673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 30254952 - 30254853
Alignment:
Q  53 tcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| |||||| |||||| |||||  ||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  30254952 tcattgtacaaacagtggg-tgttatccattacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcc 30254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 32216198 - 32216088
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| || |||||||||| |||||| |||| | |||||||||| | |||| |||||| ||||| |||||||||| || |||||| ||||||||||||    
T  32216198 ttgttaatctaatgaattgatgatactacgaggactgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgt 32216099  T
Q  105 taacttcacca 115  Q
    |||||||||||    
T  32216098 taacttcacca 32216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 27533011 - 27533136
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||| ||   |||||||||||| || | |||||| |||||| |||||| ||  ||| |||| ||| ||||||    
T  27533011 tcttgttaatctgatgaattgatgatactatggggattgaacttttgatgccactgtacaaagagtgggttgttacccacaatacttttgatgctatagt 27533110  T
Q  103 gttaacttcaccaaaaaagtcattct 128  Q
    ||||||||||||| ||||||||||||    
T  27533111 gttaacttcaccagaaaagtcattct 27533136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 3535077 - 3534926
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||||||| || | || | ||||||||||||||| |  ||||| |||  |||||||||||  | | |||| ||||||||||    
T  3535077 tcttgttaatctgatgaattgataatattaaggggactgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagt 3534978  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||| | |||| | ||||| |||||||||   |||||||||||||    
T  3534977 gttaacttcactagaaaattaattctaatgacttcataatagaattttcctt 3534926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 11742382 - 11742532
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| | ||||||||||| ||| |||| || | ||||||||||||||| | |||||| |||||||||||||| |  | | |||| ||  ||||||    
T  11742382 tcttgttaatccgatgaattgatgatattatg-ggactgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatagt 11742480  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| |||||||||||| || |||||||  || ||||||||||    
T  11742481 gttaacttcaccagaaaagtcattctcataacttcacgataaaattttcctt 11742532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 7079094 - 7079254
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaa-----------tagtggggtgttactcattatattttt 91  Q
    |||||||||  |||||||||||| ||||||||| | | ||||||||||||||||| ||||||           |||||||||||||||||  | | ||||    
T  7079094 tcttgttaatttgatgaattgatgatactatgatgactgaacttttgatgtcattgtacaaacagtgaggtgttagtggggtgttactcacaacactttt 7079193  T
Q  92 tatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
     || ||||||||||||||||||||||||||||||| | ||||||| ||| || ||||||||    
T  7079194 gatattatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcc 7079254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 39393528 - 39393368
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| |||||||||| || |||||||| ||    ||||||||||| || | |||||| | ||  || |||||||  | | |||| ||| ||||||    
T  39393528 tcttgttaatctgatgaatttatgatactatggggattaaacttttgatgccactgtacaaacaatgaagtattactcacaacacttttgatgctatagt 39393429  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaattata 163  Q
    ||||||||||  | |||||||||||| || |||||||||||||||||||||| ||||||||    
T  39393428 gttaacttcattagaaaagtcattctcataacttcaccgtagaattttcctttaaattata 39393368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 238544 - 238690
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||| ||||| | |||||||| || | ||||||||||||||||| |||||| |||||  |||||||||  | |||||| ||  ||||||    
T  238544 tcttgttagtctgattaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtgga-tgttactcacaacatttttaatactatagt 238642  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||||||||| ||| |  |||||||||  |||||||||    
T  238643 gttaacttcaccaaaaaagttattttcgtgacttcactatagaatttt 238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 33725629 - 33725778
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||||||||| | |||||||||||| ||    | |||||||||| || |||||| || | |||| ||| ||||    
T  33725629 agtcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgccaccaaagaaatagtgggctgctactcaatacacttttgatgatata 33725728  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    | ||| ||||||| | ||||||||||||  |||||| ||| |||||||||    
T  33725729 gcgttgacttcactagaaaagtcattctcttgactttaccatagaatttt 33725778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 25160442 - 25160365
Alignment:
Q  75 ttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||| ||||||||||||||| |||||| |||| ||||||  ||||| ||||||||||| ||||||||||||||    
T  25160442 ttactcattacattttttatgttata-tgttaatttcatcaaaaatatcatttttatgacttcatcgtagaattttcct 25160365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 15168243 - 15168083
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtca---ttc----tacaaatagtggggtgttactcattatatttttta 93  Q
    ||||||||||| ||||||||||||| |||||||| || | |||||||||||| ||   | |    |||||| ||||||||| |||||| || | |||| |    
T  15168243 agtcttgttaatctgatgaattgatgatactatggggactgaacttttgatgccaccgtacaacgtacaaacagtggggtgctactcactacacttttga 15168144  T
Q  94 tgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    || ||||||||| ||||||||| ||||  |||||| || |||||||  |||||||||||||    
T  15168143 tgctatagtgttgacttcaccagaaaaagcattctcatcacttcacgatagaattttcctt 15168083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 40884958 - 40884841
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||  |||||||  || | |||||||||||| ||   |||||| ||||||||| |||||| || | |||| ||||||| ||    
T  40884958 tcttgttaatctgatgaattgaagatactatagggactgaacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgttatggt 40884859  T
Q  103 gttaacttcaccaaaaaa 120  Q
    ||| ||||||||| ||||    
T  40884858 gttgacttcaccagaaaa 40884841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 4330428 - 4330288
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagt-ggggtgttactcattatattttttatgttat 99  Q
    ||||||||||| ||||| ||||||| ||||||||| | | |||||||||||  || | |||||| | | ||||||||||||| || | |||| ||| |||    
T  4330428 agtcttgttaatctgataaattgatgatactatgatgactgaacttttgatcccactgtacaaacattgggggtgttactcactacacttttgatgctat 4330329  T
Q  100 agtg-ttaacttcaccaaaaaagtcattcttatgacttcac 139  Q
    |||| ||| ||||| || |||||||||||| || |||||||    
T  4330328 agtgtttatcttcatcagaaaagtcattctcataacttcac 4330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 16132523 - 16132464
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaattata 163  Q
    ||||||||||||||||||||| |||  |||||||||| ||||||||||||  ||||||||    
T  16132523 ttaacttcaccaaaaaagtcaatctattgacttcaccatagaattttcctaaaaattata 16132464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 22170814 - 22170748
Alignment:
Q  88 tttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||| ||||||||||||||||||||  | |||||||||| | |||| |||||| |||||||||||||    
T  22170814 ttttgatgttatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattttcctt 22170748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 47279204 - 47279159
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccatagatttttcc 47279159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 4150490 - 4150538
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    ||||||||| |||||||||| | ||||||||||| ||||||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattttccttc 4150538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 43579290 - 43579242
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||| | |||||||||||| ||||||||||| |||||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 43579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25160779 - 25160716
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaa 64  Q
    |||||| |||| || |||||||||| ||||||||||| | |||||||||||| |||| ||||||    
T  25160779 agtcttattaatctaatgaattgatgatactatgaggactgaacttttgatgccattgtacaaa 25160716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 26970310 - 26970260
Alignment:
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||||||| | ||||||| ||| || |||||||||    
T  26970310 gttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcct 26970260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 42663785 - 42663835
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||| |||||||||||| | ||||||||||| |||||||| ||||    
T  42663785 ttaacttcactaaaaaagtcattatcatgacttcaccatagaatttccctt 42663835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 13876919 - 13876968
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||| |||||||||| | || |||||||| ||||||||||||    
T  13876919 ttaacttcaccataaaagtcattttcataacttcaccatagaattttcct 13876968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 146050 - 146199
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  146050 agtcttgttaacctgatgaattgatgatactatgaaggctgaacttttgatgtcattctacaaataatggggtgttactcattacattttttatgttata 146149  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
     ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  146150 atgttaacttaaccaaaaaaatcattcttatgacttcaccgtagaatttt 146199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 10555242 - 10555393
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||||||||   ||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||    
T  10555242 agtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttata 10555341  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10555342 gtgttaacttcaccaaaaaagtcattctcatgacttcaccgtagaattttcc 10555393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 30654623 - 30654775
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||||||||||| |||| ||||||||| | | |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  30654623 agtcttgttaacctgatgaagtgatgatactatgaaggctgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttata 30654722  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||| ||| ||||||||||||||| || |||||||||    
T  30654723 gtgttaacttcaccaaaaaaatcactcttatgacttcaccataaaattttcct 30654775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1150145 - 1150297
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||| | | |||||||||||||| || |||||| |||||| |||||||||||| |||||| ||||||||    
T  1150145 agtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttata 1150244  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1150245 gcgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcct 1150297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 23854475 - 23854622
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| || |||| ||||| ||||||||||| | |||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||||||||||||    
T  23854475 ttgttaatctaatgagttgatgatactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgt 23854574  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  23854575 taacttcaccaaaaaagtcattctcatgacttcaccgtagacttttcc 23854622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 37970559 - 37970704
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |  |||||||||| ||||||||||| | |||||||||||| |||| |||||| ||||||||||||||||||| |||||| ||||||||    
T  37970559 agtcttgttaatcatatgaattgatgatactatgagggctgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttata 37970658  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaa 146  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  37970659 gtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 1205075 - 1204924
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  ||||||| |||| ||||||||||| | ||||||||||||||||| |||||| ||||  |||||||||| || |||||||||||||||||    
T  1205075 tcttgttaatatgatgaactgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagt 1204976  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  1204975 gttaacttcaccagaaaagtcattctcatgacttcaccgtaaaattttcctt 1204924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 16223013 - 16222860
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| | ||||||||||| ||||||||||| | ||||||||||||||||| ||||||  ||||||   |||||| ||||||||||||||||||    
T  16223013 agtcttgttaatcggatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttata 16222914  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||    
T  16222913 gtgttaaattcaccagaaaagtcattctcatgatttcaccgtagaattttcctt 16222860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 43643635 - 43643789
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||| |   ||||||| ||||||||| |||||| ||| | ||||||||||||| |||||| ||||||||    
T  43643635 agtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttata 43643734  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  43643735 gtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttccttc 43643789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 41362665 - 41362517
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| || | ||||||||   ||    
T  41362665 agtcttgttaatctgatgaattgatgatactatgaggtctgaacttttgatgtcactatacaaatagtggggtgttactcactaca-tttttatg--cta 41362569  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||||||| | || |||||||| |||||||||||    
T  41362568 gtgttaacttcaccaaaaaagtcattttcataacttcaccatagaattttcc 41362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 6098558 - 6098709
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||  |||||||| || | ||||||||||||||| | |||||| |||||||||||||||| ||||||||| ||| ||||    
T  6098558 agtcttgttaatctgatgaattgacgatactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctata 6098657  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    || ||||||||||||||||||| ||| | ||||||||||| |||||||||||    
T  6098658 gtattaacttcaccaaaaaagttattttcatgacttcaccatagaattttcc 6098709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 13307771 - 13307622
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||| ||| |||||||||||||||||||||| || | ||||||||||||||| | ||||||||||| |||||||||||  | | |||| ||||||||||    
T  13307771 tcttgctaatctgatgaattgataatactatggggactgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagt 13307672  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  13307671 gttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 13307622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 8803890 - 8803998
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    ||||||||||||    
T  8803890 gaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtca----tatgacttcacc 8803985  T
Q  141 gtagaattttcct 153  Q
     ||||||||||||    
T  8803986 atagaattttcct 8803998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31933926 - 31934076
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| | ||||||||||| ||||||| | | | ||||||||||||||||| || ||| |||||||||||||||||||||||||| || | |||    
T  31933926 agtcttgttaatcggatgaattgatgatactataatgactgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcata 31934025  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||||||||||||||| ||||||| || |||||||  ||||||||||    
T  31934026 gtgttaacttcaccaaaaaaatcattctcataacttcacgttagaattttc 31934076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 36695018 - 36695159
Alignment:
Q  13 ctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttca 112  Q
    ||||||||||||| |||||||| || | ||||||||||||||||| |||||| ||||||||||||||||  | |||||| || |||||||||||||||||    
T  36695018 ctgatgaattgatgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttca 36695117  T
Q  113 ccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
     || |||||||||| |  |||||||||| |||||||||||||    
T  36695118 tcagaaaagtcattttcctgacttcaccatagaattttcctt 36695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 38644126 - 38643969
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||  | | |||||||||||| || |  ||||| ||||||||||||||||  | | |||| ||||||||||    
T  38644126 tcttgttaatctgatgaattgatgatactatggagactgaacttttgatgccactagacaaacagtggggtgttactcacaacacttttgatgttatagt 38644027  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaatt 160  Q
    |||||||| ||||||||||||||||| |||| |||||| |||||||||||||| ||||    
T  38644026 gttaacttgaccaaaaaagtcattctcatgatttcaccatagaattttccttctaatt 38643969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 12876252 - 12876108
Alignment:
Q  8 ttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaa 107  Q
    |||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| ||| ||||||||||||  | ||||||||| ||||||||||||    
T  12876252 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaa 12876153  T
Q  108 cttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| || |||||||||| |  |||||| ||| |||||||||||    
T  12876152 cttcatcagaaaagtcattttcgtgacttaaccatagaattttcc 12876108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 16446915 - 16447067
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||| |||| || |  ||||||||||| |||| |||||| |||||||||||||||| || | |||| ||||||||    
T  16446915 agtcttgttaatctgatgaattgatgatagtatggggactaaacttttgatgccattatacaaacagtggggtgttactcactacaattttgatgttata 16447014  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||| | || |||||||||| | ||||||||||| ||||||||||||    
T  16447015 gtgttaactttatcagaaaagtcattttcatgacttcaccatagaattttcct 16447067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 27082878 - 27083030
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||||||||| | |||||||| ||| || |  ||||| |||||||||||||||| || | |||| ||| ||||    
T  27082878 agtcttgttaatttgatgaattgatgatactatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctata 27082977  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||||| |||||||| ||| ||||||||||| ||||||||||||    
T  27082978 gtgttaacttcaccagaaaagtcagtctgatgacttcaccatagaattttcct 27083030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 34895117 - 34894964
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||| ||||| | | |||||||||||| || | |||||| ||||| |||||||||| || | | || ||||||||    
T  34895117 agtcttgttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttata 34895018  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| || |||||||||| | ||||||||||| |||||||||||||    
T  34895017 gtgttaacttcatcagaaaagtcattttcatgacttcaccatagaattttcctt 34894964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 11727172 - 11727037
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||| ||||||| | |||||||||||| || | ||||||||||||||||||||| |  | | |||| ||||||||||    
T  11727172 tcttgttaatttgatgaattgatgatattatgaggactgaacttttgatgccactatacaaatagtggggtgttacttacaacacttttgatgttatagt 11727073  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttca 138  Q
    |||||||||||||||||| ||||||| || ||||||    
T  11727072 gttaacttcaccaaaaaaatcattctcataacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 7890997 - 7891137
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||| ||||||| | |||||||||||| |||| ||||||  |||| ||||||         ||||| ||||||||    
T  7890997 agtcttgttaatctgatgaattgatgatattatgaggaccgaacttttgatgccattgtacaaacggtggagtgtta---------tttttgatgttata 7891087  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  7891088 gtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 9864286 - 9864145
Alignment:
Q  13 ctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttca 112  Q
    ||||||||||||| ||| |||| || | ||||||||||||||||| |||||| ||||||||||||||||  | |||||| ||  ||||||||||| ||||    
T  9864286 ctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttca 9864187  T
Q  113 ccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||| |  ||||||||   |||||||||||||    
T  9864186 ccaaaaaagtcattttcgtgacttcattatagaattttcctt 9864145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 465990 - 465843
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||| | || | ||| |||||||| || | |||||| ||||||||||||||||  | | |||| ||||||| ||    
T  465990 tcttgttaatctgatgaattgatgatactaaggggactgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgt 465891  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||| |||||||||| | ||||||||||| || ||||||    
T  465890 gttaacttcaccacaaaagtcattttaatgacttcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1149672 - 1149762
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttt 91  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||| |||||| |||||| |||||||||||| ||||||    
T  1149672 agtcttgttaatctgatgagttgatgatactatgaggacagaacttttgatgtcattgtacaaacagtgggttgttactcattacattttt 1149762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 5299988 - 5300137
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||| ||| | |||||||||||| || | |||||| ||| | ||| |||| |  | | |||| ||| ||||||    
T  5299988 tcttgttaatctgatgaattgatgatactataaggactgaacttttgatgccactgtacaaacagtagagtgctacttacaacacttttgatgctatagt 5300087  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  5300088 gttaacttcattaaaaaagtcattctcatgacttcaccatagaattttcc 5300137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 15009306 - 15009241
Alignment:
Q  87 ttttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15009306 tttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 15009241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 44869643 - 44869495
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatat--tttttatgttatagt 102  Q
    ||||||| ||||| ||||||| ||||||||| |   ||||||||||||||||| | |||| |||||||  | |||||  | ||  |||| ||||||||||    
T  44869643 ttgttaatctgataaattgatgatactatgacgattgaacttttgatgtcattgtgcaaacagtgggga-tcactcacaaaatacttttaatgttatagt 44869545  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  44869544 gttaacttcaccaaaaaagttattcttataatttcaccgtagaattttcc 44869495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 40862530 - 40862409
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatatttttt-atgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 139  Q
    |||||||||||| |||| |||||| ||||||||||||||||  | ||||||| || |||||||||||||||||||| |||||| ||| |  |||||||||    
T  40862530 gaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcaccagaaaagttattttcgtgacttcac 40862431  T
Q  140 cgtagaattttccttcaaatta 161  Q
      ||||||||||||||| ||||    
T  40862430 tatagaattttccttcatatta 40862409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 4133077 - 4133199
Alignment:
Q  28 tactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattc 127  Q
    |||||||||| | |||||||||||| || | |||||| |||  ||| ||||||| ||| ||||||||| ||  |||||||||||||||||||||||||||    
T  4133077 tactatgaggactgaacttttgatgccactgtacaaacagtcaggtattactcactatcttttttatgcta--gtgttaacttcaccaaaaaagtcattc 4133174  T
Q  128 ttatgacttcaccgtagaattttcc 152  Q
    | ||||||| ||| || ||||||||    
T  4133175 tgatgacttgaccataaaattttcc 4133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 34952084 - 34952223
Alignment:
Q  14 tgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcac 113  Q
    |||||||||||| ||||||   || | ||||||||||||||| | |||||| |||||| |||||||||  | | |||| ||| |||||||||||||| ||    
T  34952084 tgatgaattgatgatactaaagggactgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaacttgac 34952183  T
Q  114 caaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    || |||||||||| | ||||||| ||  ||||||||||||    
T  34952184 cagaaaagtcattttaatgactttactatagaattttcct 34952223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 35459823 - 35459888
Alignment:
Q  86 attttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||| ||||||| ||||||| || |||||||||||||| ||||||||||| ||||||||||    
T  35459823 attttttatattatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaattttc 35459888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 24823378 - 24823465
Alignment:
Q  67 gtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| | | | | |||| || ||||||||||||||||||||||||||||||||| || |||| ||| ||| |||||||||    
T  24823378 gtggggtgttacacttaacacttttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttcctt 24823465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 35735984 - 35736030
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccatagaatttt 35736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 33906309 - 33906223
Alignment:
Q  66 agtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||| |||||| || | |||| ||  ||||||||| ||||||||| |||||||||||| || | |||||| |||||||||||    
T  33906309 agtggggtgctactcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattttcc 33906223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 39099163 - 39099237
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttact 79  Q
    ||||||| ||||||||||||  ||||||||||| | ||||||||||||  | | |||||| ||||||||||||||    
T  39099163 ttgttaatctgatgaattgacgatactatgaggactgaacttttgatgctagtgtacaaagagtggggtgttact 39099237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 41911030 - 41911179
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtgggg-tgttactcattatattttttatgttatag 101  Q
    ||||||||| ||||||||||||| ||||||||  | | ||| ||||||||  | | |   |||||||||| |||||||||  | | |||| ||| |||||    
T  41911030 tcttgttaatctgatgaattgatgatactatgttgactgaatttttgatgctactgttataatagtgggggtgttactcacgacacttttgatgatatag 41911129  T
Q  102 tgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    | ||||||||||||||||| ||| | | ||||||||| |||||||||||||    
T  41911130 tattaacttcaccaaaaaaatca-tatcatgacttcatcgtagaattttcc 41911179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 5018058 - 5018006
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttca 156  Q
    |||||||||| |||||||||||| | ||||||||||| |||||||| ||||||    
T  5018058 ttaacttcactaaaaaagtcattatcatgacttcaccatagaatttcccttca 5018006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 1835392 - 1835438
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||||| |  |||||||| ||||||||||||    
T  1835392 acttcaccaaaaaagtcattctaacaacttcaccatagaattttcct 1835438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 1879233 - 1879279
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||||| |  |||||||| ||||||||||||    
T  1879233 acttcaccaaaaaagtcattctaacaacttcaccatagaattttcct 1879279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 4108912 - 4108962
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||| ||||||||||||||| | ||||||||||| || ||||||||||    
T  4108912 ttaactttaccaaaaaagtcattttcatgacttcaccataaaattttcctt 4108962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 23176763 - 23176805
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaa 146  Q
    ||||||||||||||||||||||| | ||||||||||| |||||    
T  23176763 ttaacttcaccaaaaaagtcattttcatgacttcaccatagaa 23176805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35459751 - 35459813
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaa 63  Q
    ||||||||||| ||||||| ||||| ||| ||||||| | |||||||| |||||||| |||||    
T  35459751 agtcttgttaatctgatgagttgatgatattatgaggactgaacttttaatgtcattgtacaa 35459813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 7998402 - 7998361
Alignment:
Q  112 accaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||| |||||||||||| ||||||||||| ||||||||||||    
T  7998402 accagaaaagtcattctcatgacttcaccatagaattttcct 7998361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 39099265 - 39099302
Alignment:
Q  117 aaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  39099265 aaaagtcattctcatgacttcaccatagaattttcctt 39099302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 1954036 - 1954104
Alignment:
Q  8 ttaacctgatgaattgata-atactatgaggtcagaacttttgatgtcattctacaaatagtggggtgt 75  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||| || | | |||||||| ||||||    
T  1954036 ttaatctgatgaattgatagatactatgagggctgaacttttgatgccactgtccaaatagtagggtgt 1954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 34685785 - 34685733
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttca 156  Q
    ||||||||| ||||||| ||||||| || |||||| | |||||||||||||||    
T  34685785 ttaacttcatcaaaaaattcattctcataacttcatcatagaattttccttca 34685733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 9e-56; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24211867 - 24211717
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||||| ||| ||| ||||||||||||||| |||||| ||||||||    
T  24211867 agtcttgttaacctgatgaattgatgatactatgagggctgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttata 24211768  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24211767 gtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttc 24211717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 38258671 - 38258521
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||||||||   ||||||||||||||||| ||||||  ||| |||||||||||||| |||||||||||||||    
T  38258671 agtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttata 38258572  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  38258571 gtgttaacttcaccaaaaaaatcatttttatgacttcaccgtagaattttc 38258521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 7334920 - 7334769
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||||  | ||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  7334920 agtcttgttaagctgatgagttgatgatactatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttata 7334821  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  7334820 gtgttaacttcatcaaaaaagtcattctcacgacttcaccgtagaattttcc 7334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 37109998 - 37109847
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||| ||| | | | ||||||||||||||||| ||||||  |||||||||||||||||| |||||||||||||||    
T  37109998 agtcttgttaatctgatgaattgatgatattataatgactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttata 37109899  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  37109898 gtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 37109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 18797453 - 18797302
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| |||||||||||   ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||  ||    
T  18797453 agtcttgttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgt--ta 18797356  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  18797355 gtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcctt 18797302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 17842621 - 17842774
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||| ||| | | | || |||||||||||||| ||||||  |||||||||||||||||| |||||||||||||||    
T  17842621 agtcttgttaatctgatgaattgatgatattataatgactgagcttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttata 17842720  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  17842721 gtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattttcctt 17842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 27283870 - 27283719
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||| ||||||||||||||||||| | ||||||||||| ||||| ||||||  |||||||||||||||||| |||||| ||||||||    
T  27283870 agtcttgttaatctgataaattgataatactatgaggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttata 27283771  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||| ||||| |||| |||||||| |||||||||||    
T  27283770 gtgttaacttcaccaaaaaaatcatttttataacttcaccatagaattttcc 27283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30055653 - 30055499
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||| | |||| || |||||    
T  30055653 agtcttgttaatctgatgaattaatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattata 30055554  T
Q  101 gtgttaacttca-ccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  30055553 gtgttaacttcatcaaaaaaagtcattcttatgacttcaccatagaattttcctt 30055499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 12390665 - 12390818
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |||||||||||||||||||||| || || |||||||||||||| |  ||||| |||||| |||||||||||| | |||| ||||||||    
T  12390665 agtcttgttaatctgatgaattgataatactatggggacataacttttgatgtcactgcacaaacagtgggatgttactcattacacttttgatgttata 12390764  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||  ||| ||||||||||| |||||||||||||    
T  12390765 gtgttaacttcaccaaaaaagtcgatctgatgacttcaccatagaattttcctt 12390818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 31579099 - 31579256
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaat-----agtggggtgttactcattatattttttatg 95  Q
    ||||||||||| ||||||||||||| ||||||||| | | ||||||||||||||||| || ||||     ||||||||||||||||||| |||||| |||    
T  31579099 agtcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcattgtataaattaaacagtggggtgttactcattacatttttgatg 31579198  T
Q  96 ttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  31579199 ttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcct 31579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 32821088 - 32821243
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| || |||||||||| |||||| |||| | |||||||||||| |||| |||||| ||||| |||||||||| || |||||| ||||||||    
T  32821088 agtcttgttaatctaatgaattgatgatactacgaggactgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttata 32821187  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttca 156  Q
     ||||||||||||||||||| ||||| | ||||||||||| |||||||||||||||    
T  32821188 ttgttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttccttca 32821243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 10481731 - 10481576
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtgggg-tgttactcattatattttttatgttat 99  Q
    ||||||||||| ||||||||||||| ||||||| | | | ||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||    
T  10481731 agtcttgttaatctgatgaattgatgatactataaagactgaatttttgatgtcattgtacaaacagtgggggtgttactcattatattttttatgttat 10481632  T
Q  100 agtgttaacttca-ccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||   ||||||||||||||  | |||| ||| |||||||||||||    
T  10481631 agtgttaacttcattaaaaaaagtcattctcctaactttaccatagaattttcctt 10481576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 5657520 - 5657673
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    |||||||  |||||||||||| ||||||||| | | |||||||||||| || | |||||| ||||||||||||||||  | | |||| ||||||||||||    
T  5657520 ttgttaatatgatgaattgatgatactatgaagactgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgt 5657619  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaa 158  Q
    ||||||||| | |||||||||||| ||||||||||| ||||||||||| |||||    
T  5657620 taacttcactagaaaagtcattctcatgacttcaccatagaattttccatcaaa 5657673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 37347130 - 37346997
Alignment:
Q  19 aattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaa 118  Q
    ||||||| ||||||||||| | ||||||||||||||| | |||||| | |||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  37347130 aattgatgatactatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaa 37347031  T
Q  119 aagtcattcttatgacttcaccgtagaattttcc 152  Q
    || ||||| | ||||||||||| || ||||||||    
T  37347030 aaatcattttcatgacttcaccataaaattttcc 37346997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 48928601 - 48928748
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| |||||||||||||||||||||| || | |||||||||||| ||   |||||||||||||||| |||||| || | |||| ||||||||||    
T  48928601 tcttgttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagt 48928699  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||| ||||||||| |||||||||||| ||||||||||| || |||||||    
T  48928700 gttgacttcaccagaaaagtcattctcatgacttcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 21991760 - 21991610
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||| || | |||||||||||| || | |||||| |||||||||||||||   | | |||| ||| ||||||    
T  21991760 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagt 21991661  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||||||||||||    
T  21991660 gttaacttcaccataaaaatcattctcatgacttcaccctagaattttcct 21991610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 23111316 - 23111162
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| || |||||||||| |||||| || |   |||||||||||| |||| |||||||||||| ||||||||||  |||||||| ||||||||    
T  23111316 agtcttgttaatctaatgaattgatgatactacgatggttgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttata 23111217  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    ||||||||||||||| |||| ||||| | |||||||||||  |||||||| ||||    
T  23111216 gtgttaacttcaccagaaaaatcattttcatgacttcaccacagaatttttcttc 23111162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 4583043 - 4582894
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||| | |||||||| || | ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||  ||||||    
T  4583043 tcttgttagtctgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagt 4582944  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
     |||||||||||| |||||||||| |  |||||||||| |||||||||||    
T  4582943 attaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcc 4582894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 48928334 - 48928466
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| |||||||||||||||||||||| || | |||||||||||| ||   |||||||||||||||| |||||| || | |||| ||||||||||    
T  48928334 tcttgttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagt 48928432  T
Q  103 gttaacttcaccaaaaaagtcattcttatgactt 136  Q
    ||| ||||||||| |||||||||||| |||||||    
T  48928433 gttgacttcaccagaaaagtcattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31520759 - 31520909
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  | |||||||||| |||||||| || | ||||||||||||||| | |||||| | ||| |||||||||| ||||||||| ||| ||||    
T  31520759 agtcttgttaatttaatgaattgatgatactatg-ggactgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtata 31520857  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    || ||||||||||||||||||||||| | ||||||||| | || ||||||||    
T  31520858 gtattaacttcaccaaaaaagtcattttcatgacttcatcataaaattttcc 31520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9355861 - 9356014
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |||||||||| |  ||| ||||||  |  |||||||||||||| | |||||| |||||||| || |||| || |||||||||| ||||    
T  9355861 agtcttgttaatctgatgaattaacgataatatgagaactaaacttttgatgtcactgtacaaacagtggggtattgctcactacattttttatgctata 9355960  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||| ||||||||||  |||||||| ||||||||||| || ||||||||||    
T  9355961 gtgttaaattcaccaaaatggtcattctcatgacttcaccataaaattttcctt 9356014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 8861407 - 8861260
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||| ||||||| |||||||| || |  ||||||||||| || | |||||| |||||||||||| |||| | | |||| ||| ||||||||    
T  8861407 ttgttaatctgattaattgatgatactatggggacttaacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgt 8861308  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||| | | |||||||||||| ||||||||||| |||||||||||    
T  8861307 taacttcgcgagaaaagtcattctcatgacttcaccatagaattttcc 8861260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 22687361 - 22687215
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||||||||| |||||||| || | |||||||||||  || |  ||||| ||||| ||||||||||  | |||||| ||||||||||||    
T  22687361 ttgttaatctgatgaattgatgatactatggggactgaacttttgataccactgcacaaacagtggagtgttactcacaacatttttgatgttatagtgt 22687262  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||| || |||||||||||| |||||||||   |||||||||||||    
T  22687261 taacttcatcagaaaagtcattctcatgacttca---tagaattttcctt 22687215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 26524364 - 26524515
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||| ||||||| ||||||||||| | | |||||||||| || |  ||||| | ||| |||||| |||  | |||||| ||||||||||    
T  26524364 tcttgttaatatgataaattgatgatactatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagt 26524463  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||| |||||| |||||||||||| ||||||||||| |||||||||||||    
T  26524464 gttaacatcaccagaaaagtcattctcatgacttcaccatagaattttcctt 26524515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 27421417 - 27421563
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||| |||| || ||| ||| ||| | ||||||||||||||||| |||||| ||||| ||||||||||  | | |||| ||||||||||    
T  27421417 tcttgttaatctgataaatttatgatattat-aggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagt 27421515  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||||||| ||||| | | ||||||||| |||||||||    
T  27421516 gttaacttcaccaaaaaaatcattatcacgacttcaccatagaatttt 27421563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 11071328 - 11071182
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||||||||| ||||||||||  | ||||||||||||||| | |||||| ||||| |||||||||  ||||||||| ||| ||||||      
T  11071328 ttgttaatctgatgaattgatgatactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatatagtac 11071229  T
Q  105 taacttcaccaaaaaagt-cattcttatgacttcaccgtagaatttt 150  Q
    |||||| ||||||||| | |||| | ||||||||||| |||||||||    
T  11071228 taactttaccaaaaaaatacattttcatgacttcaccatagaatttt 11071182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 43686164 - 43686015
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||| | |||||||  || | |||||||||||| |||| |||||| |||||| |||||||||  | |||||| || |||||||    
T  43686164 tcttgttagtctgatgaattgttgatactatagggactgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagt 43686066  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||| ||||||||||| |  |||||||||| ||||||||||||    
T  43686065 gttaacttcacccaaaaagtcattttcgtgacttcaccatagaattttcct 43686015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 6546643 - 6546494
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||       |||||||||||| | | ||||||||||||||||||||||   | | |||| ||| ||||||    
T  6546643 tcttgttaatctgatgaattgatgatactatggatagtaaacttttgatgttactgtacaaatagtggggtgttactcgcaacacttttgatgctatagt 6546544  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||| | |||| ||||||||||||||||||| |||||||||||    
T  6546543 gttaacttcactagaaaaatcattcttatgacttcaccatagaattttcc 6546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 15612796 - 15612944
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||| |||  || | |||||||||||| || |||||||| | ||||||||||||||| | |  ||| ||||||||||    
T  15612796 tcttgttaatctgatgaattgatgatattatagggactgaacttttgatgccactctacaaacactggggtgttactcataaca-ctttgatgttatagt 15612894  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||| | ||| || ||||| ||||||||||| |||||||||||    
T  15612895 gttaacttcacaagaaacgttattctcatgacttcaccatagaattttcc 15612944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 29173653 - 29173528
Alignment:
Q  14 tgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcac 113  Q
    |||||||||||| ||||||||||| | ||||||||||||||||| |||||| ||||| ||||||||||  | | |||| ||  || ||||||||||||||    
T  29173653 tgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatactacagtgttaacttcac 29173554  T
Q  114 caaaaaagtcattcttatgacttcac 139  Q
    || ||||||||||| | |||||||||    
T  29173553 cagaaaagtcattcatgtgacttcac 29173528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41765113 - 41765266
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||| | | |||||||||| ||   |||||| ||||||||| |||||| || | |||| ||| ||||    
T  41765113 agtcttgttaatctgatgaattgatgatactatgaggactggacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgctata 41765212  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    || || |||| | || |||||||||||| ||||||||||| | |||||||||||    
T  41765213 gtattgactttatcagaaaagtcattctcatgacttcaccatggaattttcctt 41765266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 38053572 - 38053493
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaa 120  Q
    ||||||||||||||||| |||||| ||| |||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  38053572 gaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcaccaaaaaa 38053493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 44413417 - 44413564
Alignment:
Q  4 cttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtg 103  Q
    ||||||||  |||||||||||  ||||||||  | | ||||||||||| ||| | |||||| | |||||||||||||| ||||||||| |||||||||||    
T  44413417 cttgttaatttgatgaattgaagatactatggagaccgaacttttgatttcagtgtacaaacattggggtgttactcactatatttttgatgttatagtg 44413516  T
Q  104 ttaacttca-ccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||   |||||||||||| | ||||||| ||| |||||||||    
T  44413517 ttaacttcattaaaaaaagtcattttcatgactttaccatagaatttt 44413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 12165876 - 12165727
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||    || |  ||||||||||| || | |||||| ||||||||||||||||  | | |||  ||| ||||||    
T  12165876 tcttgttaatctgatgaattgatgatacttaagggacttaacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagt 12165777  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| |||||||||| | | |||||||||||||||||||||    
T  12165776 gttaacttcaccagaaaagtcattttaacgacttcaccgtagaattttcc 12165727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 25691583 - 25691729
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtg-ttactcattatattttttatgttatagtg 103  Q
    |||||||  |||||||||||||||||||| ||  | ||||| |||||| || | |||||| |||| |||  |||||||  ||| |||| |||||||||||    
T  25691583 ttgttaatatgatgaattgataatactataagaactgaactgttgatgccactgtacaaacagtgaggtaattactcacaatacttttgatgttatagtg 25691682  T
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||| | |||||||||||| ||||||||||| || ||||||    
T  25691683 ttaacttcacgagaaaagtcattctcatgacttcaccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 32432576 - 32432431
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||||| ||||||||  | | ||||||||||||||||| |||||| | ||||||||||||||  | |||||     | |||||    
T  32432576 tcttgttagtctgatgaattgatgatactatggagactgaacttttgatgtcattgtacaaacaatggggtgttactcacaacatttt-----tgatagt 32432482  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||| |||| ||||| |  |||||||||| ||||||||||||    
T  32432481 gttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcct 32432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 33688299 - 33688446
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||   | | |||||||||||| || |  ||||| ||| || |||||||||| | | |||| ||||||||||    
T  33688299 tcttgttaatctgatgaattgatgatactatagagactgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagt 33688398  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||| |||| |||||||||||| || |||||||| || |||||||    
T  33688399 gttaactt-accagaaaagtcattctcataacttcaccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 10359250 - 10359400
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||| | ||||||||||||| ||||||| ||  | ||||||||||||||| | || ||||||| || ||||||||| || | |||| ||| ||||    
T  10359250 agtcttgttgatctgatgaattgatgatactatcaga-ctgaacttttgatgtcactgtataaatagtaggatgttactcactacacttttgatgctata 10359348  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
       |||| || |||| |||||||||| | ||||||||||| |||||||||||    
T  10359349 agattaattttaccagaaaagtcattatcatgacttcaccatagaattttcc 10359400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 26980447 - 26980325
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||| |||| || | |||||||||||| || | ||||||  |||||||||||||||  | | |||| ||| |||| |    
T  26980447 tcttgttaatttgatgaattgatgatattatggggactgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataat 26980348  T
Q  103 gttaacttcaccaaaaaagtcat 125  Q
    ||||||||||||| |||||||||    
T  26980347 gttaacttcaccataaaagtcat 26980325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 8133561 - 8133609
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  8133561 ttaacttcaccaaaaaagttattcttatgacttcacagtagaattttcc 8133609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 40381988 - 40381938
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcctt 40381938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35353235 - 35353120
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcag-aacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttat 99  Q
    ||||||||||| ||||||||||| | |||||||| || ||| ||||||||||  |||  |||||| | ||||||| |||||| || | |||| ||| |||    
T  35353235 agtcttgttaatctgatgaattggtgatactatggggacagaaacttttgattccatcgtacaaacaatggggtgctactcactacacttttgatgctat 35353136  T
Q  100 agtgttaacttcacca 115  Q
    |||||| |||||||||    
T  35353135 agtgttgacttcacca 35353120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 241024 - 241070
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  241024 acttcaccaaaaaagtcattttcatgacttcaccatagaattttcct 241070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 152
Target Start/End: Original strand, 34362228 - 34362334
Alignment:
Q  46 tttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtaga 145  Q
    ||||||| || | |||||| ||||||||||||||||  | | |||| ||| ||||||||||||||  | | |||||||||||| || | |||||| ||||    
T  34362228 tttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagtcattctcataatttcaccataga 34362327  T
Q  146 attttcc 152  Q
    |||||||    
T  34362328 attttcc 34362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 8299245 - 8299192
Alignment:
Q  97 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||||||||| |||||||||| |  |||||||||| |||||||||    
T  8299245 tatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 23402371 - 23402419
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| |||||||||||| |||||||| || |||||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaattttcc 23402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 3953779 - 3953733
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||| |||||||||||| ||||||||| | |||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaatttt 3953733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 37704236 - 37704143
Alignment:
Q  59 tacaaatagtggggtgttactcattatatttttt-atgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||| | |||||||||||||| || ||||||| ||| ||||||||||||||||  |||||| ||||| |||| | |||| | |||||||||||    
T  37704236 tacaaacaatggggtgttactcactacatttttttatgctatagtgttaacttca-taaaaaaatcatttttataatttcatcatagaattttcc 37704143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 4e-55; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 34361556 - 34361704
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||||| ||||||||||| ||| ||||||| | |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  34361556 ttgttaaccggatgaattgatgatattatgagg-ctgaacttttaatgtcattctacaaacagtggggtgttactcattacattttttatgttatagtgt 34361654  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34361655 taacttcaccaaaaaagtcattcttatgacttcaccatagaattttcctt 34361704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 32912640 - 32912793
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||| ||||||| ||| ||||||  | ||||||||||| |||||||||||||| | ||||||||||||||| |||||| ||||||||    
T  32912640 agtcttgttaacctgataaattgatgatattatgagtgctgaacttttgatatcattctacaaatactagggtgttactcattacatttttgatgttata 32912739  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32912740 gtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcctt 32912793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 19089513 - 19089664
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||| | |||| || |||||    
T  19089513 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattata 19089612  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  19089613 gtgttaacttcatcaaaaaagttattcttatgacttcaccatagaattttcc 19089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 37663801 - 37663951
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||| | |||| ||||  ||    
T  37663801 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgt--ta 37663898  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  37663899 gtgttaacttcatcaaaaaagtcattcttatgacttcaccatagaattttcct 37663951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 42199880 - 42199728
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||| | |||||||| ||||||||||||||||| |||||| |||||||||| |||||| ||||||||    
T  42199880 agtcttgttaatctgatgaattgatgatactatgagggctgaactttttatgtcattctacaaataatggggtattactcattacatttttgatgttata 42199781  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    || ||||||||||||||||| |||||||||||| |||||| |||| |||||||    
T  42199780 gtattaacttcaccaaaaaaatcattcttatgatttcaccatagatttttcct 42199728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 55477951 - 55478108
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaata----gtggggtgttactcattatattttttatgt 96  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| |    |||| ||||||||| ||| |||||| ||||    
T  55477951 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgt 55478050  T
Q  97 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  55478051 tatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcctt 55478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 50697392 - 50697240
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||| |||    ||||||||||||||||| ||||||  || ||||||||||| |||||||||||||||||||    
T  50697392 agtcttgttaatctgatgaattgatgatacta-gagaattgaacttttgatgtcattgtacaaacggtagggtgttactcgttatattttttatgttata 50697294  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  50697293 gtgtttacttcactaaaaaaatcatttttatgacttcaccgtagaattttcctt 50697240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 25184264 - 25184112
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||| |   ||||||| ||||||||| |||||| ||| | ||||||||||||| |||||| ||||||||    
T  25184264 agtcttgttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttata 25184165  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  25184164 gtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcct 25184112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 19440708 - 19440860
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||| ||||||| | |||||||||||| |||| ||||||  |||| |||||| |||||| |||||| ||||||||    
T  19440708 agtcttgttaatctgatgaattgatgatattatgaggactgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttata 19440807  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgac-ttcaccgtagaattttcc 152  Q
    |||||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  19440808 gtgttaacatcaccaaaaaagtcattctcatgactttcaccatagaattttcc 19440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 27396765 - 27396618
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| |  |||||||||||||||| |||||| ||| ||||||||||||| | | |||| ||| |||| |    
T  27396765 tcttgttaatctgatgaattgatgatactatgaggacgaaacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataat 27396666  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  27396665 gttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 25701117 - 25701270
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||| |||||| ||||||||||||| ||||||||||| | ||||||||||||||| | |||||| ||| |||||||||||| || | |||| ||||||||    
T  25701117 agtcctgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttata 25701216  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
     ||||||||| ||||||||||||||| | ||||||||||| || ||||||||||    
T  25701217 atgttaactttaccaaaaaagtcattatcatgacttcaccataaaattttcctt 25701270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 36493748 - 36493897
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  | |||||||||| |||||||| || | ||||||||||||||| | |||||| | |||||||||||||| ||||||||| ||| ||||    
T  36493748 agtcttgttaatttaatgaattgatgatactatggggactgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtata 36493847  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    || ||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  36493848 gtattaacttcaccaaaaaagttattttcatgacttcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 879608 - 879760
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||| |    |||||||||||||||| |||||| | || |||||||||||||| |||||| ||||||||    
T  879608 agtcttgttaatctgatgagttgatgatactatgaagattaaacttttgatgtcattgtacaaacaatgaggtgttactcattacatttttgatgttata 879707  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||| |||||||||||||| | ||||| ||||||||||| || |||||||||    
T  879708 gtgtttacttcaccaaaaaaattattctcatgacttcaccttaaaattttcct 879760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 49376116 - 49375966
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||| | | |||||||||||| || | |||||  ||||||||||||||||  | | |||| ||| |||| |    
T  49376116 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataat 49376017  T
Q  103 gttaacttcacca-aaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  49376016 gttaacttcaccagaaaaagtcattctcatgacttcaccgtagaattttcc 49375966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 38012005 - 38011852
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||||||| |||| || | |||||||||||| ||   |||||| ||||||||| || ||| || | |||| ||||||||    
T  38012005 agtcttgttaatctgatgaattgataatattatggggactgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttata 38011906  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||| ||||||||| |||||||||||| |||| |||||| |||||||||||||    
T  38011905 gtgttgacttcaccagaaaagtcattctcatgatttcaccatagaattttcctt 38011852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 6864186 - 6864038
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||| ||||||| ||||||||||| | | ||||||||||  ||| |||||| ||| || ||||| |||||| |||||| ||||||||    
T  6864186 agtcttgttaatctgataaattgatgatactatgaggactggacttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttata 6864087  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattt 149  Q
    ||| |||||||||||||||||||||||| ||||| ||||| || |||||    
T  6864086 gtgataacttcaccaaaaaagtcattctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 4396411 - 4396324
Alignment:
Q  67 gtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||||||    
T  4396411 gtggggtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattttcctt 4396324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 29584267 - 29584411
Alignment:
Q  8 ttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaa 107  Q
    |||| ||||||||||||| ||||||||| | | |||||||||||| |||| |||||| |||| |||||||||||  | | |||| |||||||||||||||    
T  29584267 ttaatctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaa 29584364  T
Q  108 cttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||| |||||||||||  | ||||||||| |||||||||||||    
T  29584365 cttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 29584411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 34948159 - 34948306
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||| ||||||| | |||||||||||| || | |||||| ||||||||||||||||  | | |||| ||||||||||    
T  34948159 tcttgttaatatgatgaattgatgatattatgaggactgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagt 34948258  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||| ||| |||||||||||| ||||||||||| || ||||||    
T  34948259 gttaacttcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 3042718 - 3042609
Alignment:
Q  45 ttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtag 144  Q
    ||||||||||||| || |||  ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||| |||||| |||    
T  3042718 ttttgatgtcattgtataaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgatttcaccatag 3042619  T
Q  145 aattttcctt 154  Q
    ||||||||||    
T  3042618 aattttcctt 3042609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 35021099 - 35021248
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| || |||||||||| |||||| |||| |  ||||||||| | || | |||||| ||||| |||||||||| || |||||| |||||||| |||    
T  35021099 ttgttaatctaatgaattgatgatactacgaggacgaaacttttgacgccaatgtacaaacagtggtgtgttactcactacatttttgatgttataatgt 35021198  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||| |||||||||| | ||||||||||| |||||||||||||    
T  35021199 taacttcaccagaaaagtcattttcatgacttcaccatagaattttcctt 35021248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 37775816 - 37775670
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||| | ||   |||||||||||| || | |||||| ||||||||||||||||  | |||||| || |||||||    
T  37775816 tcttgttaatctgatgaattgatgatactaaggggg--gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagt 37775719  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    | |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  37775718 gctaacttcaccaaaaaaatcattttaatgacttcaccgtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 28003046 - 28003197
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| | ||||||||||| ||||||||| | | ||||||||||||||| | |||||| ||||| ||  |||| | || | |||| ||| ||||    
T  28003046 agtcttgttaatccgatgaattgatgatactatgatgactgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctata 28003145  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| ||||||||| |||||||||||| ||||||||||| |||||||||||    
T  28003146 gtgttgacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 28003197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 39398029 - 39397918
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    ||||||||||||||| | |||||| | ||||||||||||||  | | |||| ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  39398029 gaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgacttcacc 39397930  T
Q  141 gtagaattttcc 152  Q
     |||||||||||    
T  39397929 atagaattttcc 39397918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 9139396 - 9139245
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| |||||||| ||   |||||||| |||||| | ||||||  ||||||||||||||| |||  |||||||| ||||    
T  9139396 agtcttgttaatctgatgagttgatgatactatggggattgaactttttatgtcactgtacaaacggtggggtgttactcactat--tttttatgctata 9139299  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
      |||||||||||||||||||||| | | ||||||||||| |||||||||||||    
T  9139298 acgttaacttcaccaaaaaagtcaatttcatgacttcaccatagaattttcctt 9139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 53124372 - 53124287
Alignment:
Q  67 gtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||| | || ||||||||    
T  53124372 gtggggtgttactcattatatttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcatataattttcc 53124287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 23761221 - 23761089
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||| || | ||||||||||||||| | |||||| |||| |||||||||||  | | |||| ||||||||||    
T  23761221 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagt 23761122  T
Q  103 gttaacttcaccaaaaaagtcattcttatgact 135  Q
    |||||||| || | || ||||||||| ||||||    
T  23761121 gttaactttacaagaatagtcattctcatgact 23761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 47253878 - 47253751
Alignment:
Q  22 tgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaag 121  Q
    |||| ||||||||||| | ||||||||||||||| | || ||| | |||| |||||||||  | | |||| ||| |||||||||||||||||||||||||    
T  47253878 tgatgatactatgaggactgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaag 47253780  T
Q  122 tcattcttatgacttcaccgtagaatttt 150  Q
    ||||||| ||||||||||| |||||||||    
T  47253779 tcattctcatgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 7703647 - 7703517
Alignment:
Q  22 tgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaag 121  Q
    |||| |||||||| || | |||||||||||||||   |||||| |||||||||||||| |  | | |||| ||||||||||||||||||||||| |||||    
T  7703647 tgatgatactatggggactgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaag 7703548  T
Q  122 tcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||| ||||||| | | |||||||||||    
T  7703547 tcattctcatgactttaacatagaattttcc 7703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 37287845 - 37287732
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcacc-aaaaaagtcattcttatgacttcac 139  Q
    |||||||||||| || | |||||| ||||||||||||||||  | | |||| |||||||||||||||||| ||| |||||||||||||| || |||||||    
T  37287845 gaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctcattacttcac 37287746  T
Q  140 cgtagaattttcct 153  Q
    | ||||||||||||    
T  37287745 catagaattttcct 37287732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 4598141 - 4597994
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| |  ||| | || | |||||||||||| || | |||||| ||||||||||||||||  | | |||  ||||||||||    
T  4598141 tcttgttaatatgatgaattgatgagtctaaggggactgaacttttgatgccactgtacaaacagtggggtgttactcacaacactttg-atgttatagt 4598043  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||||| |||||||||||| ||||||||||| || |||||||    
T  4598042 gttaacttcaccagaaaagtcattctaatgacttcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 50764879 - 50764746
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| || |||||||||| |||||||||||   |||||||||||||||   |||||| ||||||||||||||||  | | |||| ||||  ||||    
T  50764879 tcttgttaatctaatgaattgatgatactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgatgt--tagt 50764782  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttca 138  Q
    |||||||||| ||||||||| ||||| |||||||||    
T  50764781 gttaacttcatcaaaaaagttattctcatgacttca 50764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 4205221 - 4205114
Alignment:
Q  47 ttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaa 146  Q
    ||||||||||| |||||| |||||||||||| |||  | |||||| || ||||||||||||||||| || |||||||||| |  |||||||||| |||||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaa 4205122  T
Q  147 ttttcctt 154  Q
    ||||||||    
T  4205121 ttttcctt 4205114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 55241176 - 55241315
Alignment:
Q  13 ctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttca 112  Q
    ||||| ||||||| |||||||| || | |||||||||||| || | |||||| |||||||||||||||   | | |||| ||  |||||| |||||||||    
T  55241176 ctgataaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttca 55241275  T
Q  113 ccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    | | |||||||||||| ||||||||||| |||||||||||    
T  55241276 ctagaaaagtcattctcatgacttcaccatagaattttcc 55241315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 17167824 - 17167715
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    ||||||||||||||||| |||||| ||||||||||||||||  | |||||| || ||||| ||||||||||| || |||||||||| |  | ||||||||    
T  17167824 gaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcacc 17167725  T
Q  141 gtagaatttt 150  Q
     |||||||||    
T  17167724 atagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 17173401 - 17173292
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    ||||||||||||||||| |||||| ||||||||||||||||  | |||||| || ||||| ||||||||||| || |||||||||| |  | ||||||||    
T  17173401 gaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcacc 17173302  T
Q  141 gtagaatttt 150  Q
     |||||||||    
T  17173301 atagaatttt 17173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 32592242 - 32592106
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||| | || | ||||||||||||||| | |||||| ||||| |||||||||   | | |||| ||  | ||||    
T  32592242 tcttgttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactatacaaacagtggagtgttactctcaacacttttgatactgtagt 32592143  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcac 139  Q
    |||||||||| ||||||||||||| | ||||||||||    
T  32592142 gttaacttcatcaaaaaagtcattataatgacttcac 32592106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 7152235 - 7152320
Alignment:
Q  70 gggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    |||||||||||| |||| |||| |||||||| ||||||||| |||| ||||||||||   ||||||||||| ||||||||||||||    
T  7152235 gggtgttactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattttccttc 7152320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 30002724 - 30002837
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    ||||||||||||||| | |||||| |||| |||||||||||  | | |||| ||| || |||||||||||||||| |||| ||||| | |||||||||||    
T  30002724 gaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcattttaatgacttcacc 30002823  T
Q  141 gtagaattttcctt 154  Q
     |||| ||||||||    
T  30002824 atagagttttcctt 30002837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 54499300 - 54499425
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattc-tacaaatagtggggtgttactcattatattttttatgttatag 101  Q
    |||||||||  |||||||||||| |||||||   | | |||||||||||||||||  ||||||  |||||||||||||||  | | |||| ||| |||||    
T  54499300 tcttgttaatatgatgaattgatgatactatagagactgaacttttgatgtcattagtacaaacggtggggtgttactcacaacacttttgatgctatag 54499399  T
Q  102 tgttaacttcaccaaaaaagtcattc 127  Q
    |||||||||||||| |||||||||||    
T  54499400 tgttaacttcaccagaaaagtcattc 54499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 35025669 - 35025800
Alignment:
Q  22 tgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaag 121  Q
    |||| |||||| |||| | |||||||||||||||   || ||| ||||||||| |||||| || | |||| ||| ||||||||| ||||||||| ||||     
T  35025669 tgatgatactacgaggactgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaa 35025768  T
Q  122 tcattcttatgacttcaccgtagaattttcct 153  Q
    ||||| | ||||||||| | ||||||||||||    
T  35025769 tcattttcatgacttcagcatagaattttcct 35025800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 17272075 - 17272009
Alignment:
Q  88 tttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||| ||||||||||||||||||||||| |||||||||||  | ||||||||| |||||||||||||    
T  17272075 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 17272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 46884179 - 46884245
Alignment:
Q  86 attttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||  ||||||||||| |||||||||||||| ||||||||||||  |||||||||||    
T  46884179 attttttatgttacggtgttaacttcgccaaaaaagtcatttttatgacttcactatagaattttcc 46884245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 5048025 - 5048162
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| || |||||||||| |||||||| |  | ||||||||||| ||||  |||||| |||| |||  |||||| || | |||| ||||||||    
T  5048025 agtcttgttaatctcatgaattgatgatactatgggaactgaacttttgatatcatcgtacaaacagtgtggtcctactcactacacttttgatgttata 5048124  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttca 138  Q
    | ||| ||||||||| |||| ||||||| || ||||||    
T  5048125 gagttgacttcaccagaaaaatcattctcataacttca 5048162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 33341547 - 33341397
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactc---attat-attttttatgtta 98  Q
    ||||||||| ||||||||||||| |||||||| || | |||||||||||| || | |||||| ||||||||||| |||   |  || | |||| ||| ||    
T  33341547 tcttgttaatctgatgaattgatgatactatg-ggactgaacttttgatgccactgtacaaacagtggggtgttcctcgcaacaatcaattttgatgata 33341449  T
Q  99 tagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||| ||||||| |||| ||||||| ||||||||||  |||||||||    
T  33341448 tagtgttaatttcaccagaaaaatcattctcatgacttcactatagaatttt 33341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 52516655 - 52516599
Alignment:
Q  94 tgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| || ||||||    
T  52516655 tgttatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaatttt 52516599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 38812260 - 38812310
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 38812310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 54995799 - 54995849
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  54995799 ttaacttcaccaaaaaagtcattatcatgacttcatcgtagaattttcctt 54995849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 28293236 - 28293285
Alignment:
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  28293236 gttaacttcaccgaaaaagtcattctcatgacttcagcgtagaattttcc 28293285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 46888221 - 46888338
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| |||||||||| |  ||| |||| || | |||||||||||| |  | ||||||||||||||| ||||||| || | |||| |||||||||| |    
T  46888221 ttgttaatctgatgaattaacgatagtatggggactgaacttttgatgccgctgtacaaatagtggggtattactcactacaattttgatgttatagtat 46888320  T
Q  105 taacttcaccaaaaaagt 122  Q
    |||||||| || ||||||    
T  46888321 taacttcatcagaaaagt 46888338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 51204633 - 51204580
Alignment:
Q  98 atagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  51204633 atagggttaacttcaccagaaaagtcatttttatgacttcaccatagaattttc 51204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 4934262 - 4934375
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagt-ggggtgttactcattatattttttatgttat 99  Q
    ||||||||||| |||||||| |||| |||||||||||   |||||||||||| || | |||||| | | ||||||||||||| || ||||||||  |  |    
T  4934262 agtcttgttaatctgatgaaatgatgatactatgaggattgaacttttgatgccagtgtacaaacaatgggggtgttactcactacatttttta--tact 4934359  T
Q  100 agtgttaacttcacca 115  Q
    ||||||||||||||||    
T  4934360 agtgttaacttcacca 4934375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 20097485 - 20097537
Alignment:
Q  98 atagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 47073656 - 47073707
Alignment:
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||||||    
T  47073656 gttaacttcaccaaaaaagtcattatcatgactttaccatagaattttcctt 47073707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 32579597 - 32579442
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtca---ttctacaaatagtggggtgttactcattatattttttatgtt 97  Q
    |||| |||||| |||||||| |||||||||||||||   | ||||||||||| ||   | | ||||| | ||||||| |||||| |  | |||| |||||    
T  32579597 agtcatgttaatctgatgaactgataatactatgagacta-aacttttgatggcaccgtacaacaaacactggggtgctactcactgcacttttgatgtt 32579499  T
Q  98 atagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||| |||| ||||||||| |||||||||||| |  |||||||| || ||||||||||    
T  32579498 ataatgttgacttcaccagaaaagtcattctcagaacttcaccataaaattttcctt 32579442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 33816595 - 33816728
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||| ||||||| ||||||||  | | |||||||||||| ||   || |||||||| |||| |||||| || | |||| ||| || | |    
T  33816595 tcttgttaatctgataaattgatgatactatggagactgaacttttgatgccaccgtataaatagtgaggtgctactcactacacttttgatgctacaat 33816694  T
Q  103 gttaacttcaccaaaaaagtcattcttatgactt 136  Q
    ||| ||||||||| |||| ||||||| |||||||    
T  33816695 gttgacttcaccagaaaaatcattctcatgactt 33816728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 38811861 - 38811813
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 38811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 2704560 - 2704510
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| |||||||||| | ||||||||||| || ||||||||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattttcctt 2704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 49878683 - 49878634
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  49878683 ttaacttcaccaaaaaagtcattatcat-acttcaccatagaattttcctt 49878634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 37793425 - 37793380
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||| |  ||||||| ||||||||||||    
T  37793425 acttcaccaaaaaagtcattctaacaacttcacagtagaattttcc 37793380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 53337559 - 53337624
Alignment:
Q  87 ttttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||| |||||||||||| | || |||| ||||| | ||||||| ||| |||||||||||    
T  53337559 ttttttatgttttagtgttaactttatcagaaaaatcattatcatgactttaccatagaattttcc 53337624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 11366433 - 11366585
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||| | |||||||||||| |||||| ||||||||    
T  11366433 agtcttgttaacctgatgaattgatgatactatgagggctgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttata 11366532  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||    
T  11366533 gtgttaatttcaccaaaaaagtcattcttatgatttcaccatagaattttcct 11366585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 33551038 - 33551189
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||| | | ||||||||||||||||| |||||| |||||||||||||||| || |||||| ||||||||    
T  33551038 agtcttgttaatctgatgaattgatgatactatgaagaccgaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttata 33551137  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33551138 gtgttaacttcactaaaaaagtcattctcatgacttcaccgtagaattttcc 33551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 37905857 - 37905709
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| ||||||  |||||||||||||| ||| |||||||||||||||||    
T  37905857 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagt 37905758  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||| ||||| |||| |||||||| |||||||||||    
T  37905757 gttaacttcaccaaaaaa-tcatttttataacttcaccatagaattttcc 37905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17071789 - 17071941
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||||||   | ||||||||||||||||| |||||||| || | ||||||| | || ||||||  |||||||    
T  17071789 agtcttgttaatctgatgaattgatgatactatgaataccgaacttttgatgtcattgtacaaataatgagatgttacttactacatttttgttgttata 17071888  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  17071889 gtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcct 17071941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 29242194 - 29242343
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||||||||| ||||||||| | | |||||||||||  || | |||||| ||||||||||||| || |||||||||||||||||||| |    
T  29242194 ttgttaatctgatgaattgatgatactatgaagactgaacttttgataccactgtacaaacagtggggtgttacgcactatattttttatgttatagttt 29242293  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||||||  |||| | ||||||||||| |||||||||||||    
T  29242294 taacttcaccaaaaaaaccattttcatgacttcaccatagaattttcctt 29242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 33902217 - 33902068
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |||||||| |||| ||||| ||||| | ||||||||||||||||| |||||| |||||||| ||||||| || |||||||||||  ||    
T  33902217 agtcttgttaatctgatgaactgatgatactttgaggactgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgt--ta 33902120  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||||| |||||||||||| | ||||||| | |||||||||||    
T  33902119 gtgttaacttcaccagaaaagtcattctaacgacttcatcatagaattttcc 33902068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 43648297 - 43648415
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||| | | ||||||||||||||||| |||||| |||| |||||||||||||| |||||| ||||||||    
T  43648297 agtcttgttaatctgatgagttgatgatactatgatgactgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttata 43648396  T
Q  101 gtgttaacttcaccaaaaa 119  Q
    |||||||||||||||||||    
T  43648397 gtgttaacttcaccaaaaa 43648415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 19289375 - 19289523
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||| |||| ||||||| ||||| ||||| ||||  |  |||||||||||||||| |||||| | |||||||||||||||||||||||| ||||||||    
T  19289375 agtcttattaatctgatgagttgatgatactgtgagaacttaacttttgatgtcattgtacaaacaatggggtgttactcattatatttttgatgttata 19289474  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| ||||||||||||     |||||||||| |||||||||||||    
T  19289475 gtgttaacttcatcaaaaaagtcat-----tgacttcaccatagaattttcctt 19289523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 35959020 - 35958909
Alignment:
Q  41 gaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |    
T  35959020 gaacttttaatgtcattgtacaaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcatc 35958921  T
Q  141 gtagaattttcc 152  Q
     |||||||||||    
T  35958920 atagaattttcc 35958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 17054149 - 17054300
Alignment:
Q  2 gtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatag 101  Q
    |||||||||| ||||||||||||| ||| |||||   | | ||||||||||||||| |||||| | || | ||||||| | || |||||| |||||||||    
T  17054149 gtcttgttaatctgatgaattgatgatattatgaataccgnacttttgatgtcattgtacaaacaatgagatgttacttactacatttttgatgttatag 17054248  T
Q  102 tgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    | ||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  17054249 tattaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcct 17054300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 4167071 - 4166920
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||| | |||||||| || | |||||||||||| |||| |||||| ||||||||||||||||  |||||||| ||  |||| |    
T  4167071 tcttgttagtctgatgaattgttgatactatggggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataat 4166972  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| |||||||||| |  |||||||||| |||||||||||||    
T  4166971 gttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcctt 4166920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 31570788 - 31570939
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| |||||||||| || |||||||| || | ||||||||||||||| | || |||||||||||||||||| |  | | |||| ||||||||||    
T  31570788 tcttgttaatctgatgaattcatgatactatgtggactgaacttttgatgtcactataaaaatagtggggtgttacttacaacacttttaatgttatagt 31570887  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||| ||||||| |||||| ||||| || |||||||| |||||||||||||    
T  31570888 gttaatttcaccagaaaagttattctcataacttcaccatagaattttcctt 31570939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 19424682 - 19424832
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| |  ||||||||||| || | || ||| | ||||||||||||||  | | |||| ||||||||||    
T  19424682 tcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactatataaacaatggggtgttactcacaacacttttgatgttatagt 19424781  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||| ||||| |||||| ||||||||||| || |||||||||    
T  19424782 gttaacttcaccagaaaagccattctcatgacttcaccataaaattttcct 19424832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 19314000 - 19313852
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||| ||| | ||||||||||||||| | || |||||||  |||||||||||  | | |||| ||| |||| |    
T  19314000 tcttgttaatctgatgaattgatgatactat-aggactgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataat 19313902  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  19313901 gttaacttcaccagaaaagtcattctaatgacttcaccatagaattttcc 19313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 13711613 - 13711465
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||| ||| || |  |||||||||||||| | ||||||  |||||||||||||||  | | |||| ||| |||| |    
T  13711613 tcttgttaatctgatgaattgatgataccatgtggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataat 13711514  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  13711513 gttaacttcaccagaaaagtcattctgatgacttcaccatagaattttc 13711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 4264142 - 4264281
Alignment:
Q  14 tgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcac 113  Q
    |||||||||||||||||||||  | | ||||||||||||||| | |||||| |||||| |||||||||  | | |||| ||| |||||||||||||| ||    
T  4264142 tgatgaattgataatactatggagactgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaactttac 4264241  T
Q  114 caaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    || |||||||||| | ||||||||||| ||||||||||||    
T  4264242 cagaaaagtcattatgatgacttcaccatagaattttcct 4264281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 36642135 - 36641988
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||||||||||| | ||||||||||||||| | |||||| |||| ||||||||||   | | |||| ||| ||||||    
T  36642135 tcttgttaatttgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagt 36642036  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
     |||| ||||||| |||||||||||| ||||||||||| |||||||||    
T  36642035 attaatttcaccagaaaagtcattctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 43770893 - 43771039
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||| || | || | |||||||||||| || | || ||| ||||||||||||||||  | | |||| ||||||||||    
T  43770893 tcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagt 43770992  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  43770993 gttaacttcaccaaaaaa-tcattctaatgacttcaccatagaatttt 43771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 26357726 - 26357577
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  ||||||||||||||  |||| ||  | ||||||||||||||| | |||||| |||||| ||||||||| || | |||| ||||||||||    
T  26357726 tcttgttaatatgatgaattgataactctataagaactgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagt 26357627  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||| || |||||||||| | ||||||||||| || ||||||||    
T  26357626 gttaacttcatcagaaaagtcattttcatgacttcaccataaaattttcc 26357577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 39167417 - 39167568
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  || |||||||||| ||||||||||| | ||||||||||||||||| |||||| |||| |||||||||||  ||| |||| ||  |||  |    
T  39167417 tcttgttactctaatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaggtgttactcacaatacttttgatactattct 39167516  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||| ||||||| |||||||  |||||||||| || ||||||||||    
T  39167517 gttaacttcatcaaaaaaatcattctcgtgacttcaccataaaattttcctt 39167568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 41463904 - 41464051
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| |||||||||||   |||||||||||| || | |||||| |||| |||||||||||  | | |||| || |||||||    
T  41463904 tcttgttaatatgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagt 41464003  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
     |||||||||||||||| |||||||| | ||||||||| |||||||||    
T  41464004 attaacttcaccaaaaatgtcattctcacgacttcaccatagaatttt 41464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 4478518 - 4478368
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| |  ||||||||||| || | |||||| | ||| ||||||||||  | | |||| ||||||||||    
T  4478518 tcttgttaatctgatgaattgatgatactatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagt 4478419  T
Q  103 gttaacttcaccaaaaaagtcattct-tatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||  ||||| | |||||||||||  |||||||||||    
T  4478418 gttaacttcaccaaaaatatcattttctatgacttcactatagaattttcc 4478368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 2325442 - 2325575
Alignment:
Q  21 ttgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaa 120  Q
    ||||| ||||||||||| | |||||||||||| || | |||||| | |||||||||||||| || |||| | |||||||| |||||||||||| | ||||    
T  2325442 ttgatgatactatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaa 2325541  T
Q  121 gtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||  || |||||||| |||||||||||||    
T  2325542 gtcattcacataacttcaccatagaattttcctt 2325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 3177078 - 3176941
Alignment:
Q  13 ctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttca 112  Q
    ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| ||| | ||||||||||  | |||||| || ||||||| |||||||||    
T  3177078 ctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttca 3176979  T
Q  113 ccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
     || |||||||||| |  | |||||||| |||||||||    
T  3176978 tcagaaaagtcattttcgtaacttcaccatagaatttt 3176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 33660425 - 33660569
Alignment:
Q  6 tgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgtt 105  Q
    |||||| || |||||||||| |||||| |||| | |||||||||||| || | |||||| ||| ||||||||||||  | | |||| |||||||||||||    
T  33660425 tgttaatctaatgaattgatgatactaagaggactgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgtt 33660524  T
Q  106 aacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||| || | |||||||||| | ||||||||||| |||||||||    
T  33660525 aacttaactagaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 27349993 - 27350143
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||| | || | ||||||||||||||| | |||||| |||| |||||||||||  | |||||| ||| ||||||    
T  27349993 tcttgttaatctgatgaattgatgatactaag-ggactgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagt 27350091  T
Q  103 gttaacttcaccaaaaaa-gtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||||||||  | ||| | ||||||||||| || |||||||||    
T  27350092 gttaacttcaccaaaaaatattattttaatgacttcaccataaaattttcct 27350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 4763778 - 4763628
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatag--- 101  Q
    ||||||| ||||||||||||| |||||||| |  | ||||||||||||||| | |||||| |||||||||||||||| || | ||||  || |||||       
T  4763778 ttgttaatctgatgaattgattatactatgggaactgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgt 4763679  T
Q  102 tgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||| || |||||||||| | ||||||||| | |||||||||||    
T  4763678 tgttaacttcatcagaaaagtcattttcatgacttcatcatagaattttcc 4763628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 41960947 - 41960881
Alignment:
Q  88 tttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||| |||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||||||    
T  41960947 ttttgatgttatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaattttcctt 41960881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 18494344 - 18494473
Alignment:
Q  13 ctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttca 112  Q
    ||||||||||||| ||||||||||| | ||||||||||||||            |||||||||||||||  | | |||| ||| ||||||||||||||||    
T  18494344 ctgatgaattgatgatactatgaggactgaacttttgatgtc------------gtggggtgttactcacaacacttttgatgctatagtgttaacttca 18494431  T
Q  113 ccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||| |||||||||| | |||||||||||  ||||||||||||    
T  18494432 ccagaaaagtcattttcatgacttcaccacagaattttcctt 18494473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 41465564 - 41465509
Alignment:
Q  97 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  41465564 tatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 41465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 6177823 - 6177773
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  6177823 ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattttcctt 6177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 33709286 - 33709403
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||  | ||||| |||||||| || | ||||||||||||||| | ||| || ||||| |||||||||   | | |||| ||||||||||    
T  33709286 tcttgttaatctgaatatttgatgatactatggggactgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagt 33709385  T
Q  103 gttaacttcaccaaaaaa 120  Q
    ||||||||||||| ||||    
T  33709386 gttaacttcaccataaaa 33709403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 43446463 - 43446520
Alignment:
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttcaaattat 162  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||  |||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccatagaattttcctaaaaattat 43446520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 31861943 - 31861895
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||||||||||||||| || |||||||| |||||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcc 31861895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 5881688 - 5881533
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttact-----cattatattttttatgtt 97  Q
    |||||||||  |||||||||||| |||||| | || |  |||||||||||||| | |||||| ||||||||||||||     || | |  |||| |||||    
T  5881688 tcttgttaatatgatgaattgatgatactaaggggactcaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgttttgatgtt 5881589  T
Q  98 atagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||| | | |||||||||| |||||||||| | ||||||||||  || |||||||||    
T  5881588 ataatatcaacttcaccagaaaagtcattttaatgacttcacaataaaattttcct 5881533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 44913812 - 44913662
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtca-gaacttttgatgtcattctacaaata-gtggggtgttactcattatattttttatgttata 100  Q
    ||||||||  ||||||||||||| |||||||| ||    |||||||| |||||||| |||||| | ||| |||||||||||  | |||||| ||  || |    
T  44913812 tcttgttagtctgatgaattgatgatactatgggggattgaactttttatgtcattttacaaacaagtgaggtgttactcacaacatttttgatactaca 44913713  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| | |||||||||| |  |||||||||| |||||||||||    
T  44913712 gtgttaacttcac-ataaaagtcattttcgtgacttcaccatagaattttcc 44913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 34441921 - 34441971
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||| ||||||||||||||| | ||||||||||| |||||||||||||    
T  34441921 ttaactttaccaaaaaagtcattttcatgacttcaccatagaattttcctt 34441971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 41643920 - 41643874
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccatagaatttt 41643874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45327871 - 45327817
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtca 55  Q
    ||||||||||| ||||||||||||| ||||||||| | | |||||||||||||||    
T  45327871 agtcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgtca 45327817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 44286096 - 44285951
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| |||||||||| || |||||||| || |  ||||||||||| || | |||||| |||| | | || |||   | | |||| ||| ||||||||    
T  44286096 ttgttaatctgatgaatttatgatactatgtggactaaacttttgatgccactatacaaacagtgagatattgctcgcaacacttttgatgctatagtgt 44285997  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||| || |||| ||||||  |||||||||||||| ||||||    
T  44285996 taacttcatcagaaaaatcattcgcatgacttcaccgtataatttt 44285951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 22963448 - 22963400
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||| |||| |||||||||||||||||||||||| || ||||||||    
T  22963448 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 22998029 - 22998077
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||| |||| |||||||||||||||||||||||| || ||||||||    
T  22998029 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41960991 - 41960939
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgt 53  Q
    ||||||||||| ||||||||||||| |||||||| || | |||||||||||||    
T  41960991 agtcttgttaatctgatgaattgatgatactatgtggactgaacttttgatgt 41960939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 7007051 - 7007094
Alignment:
Q  110 tcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  7007051 tcaccaaaaaaatcattctcatgacttcaccatagaattttcct 7007094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 42005437 - 42005390
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||||||||| ||||| | ||||||||||| ||||||||||    
T  42005437 ttaacttcaccaaaaaaatcattttcatgacttcaccatagaattttc 42005390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 19093461 - 19093411
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| |||| ||||||| ||||||||||| || ||||||||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattttcctt 19093411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 39788580 - 39788626
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||| | |||||||||||||||||||||||| || |||||||||    
T  39788580 acttcactagaaaagtcattcttatgacttcaccataaaattttcct 39788626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 41051263 - 41051308
Alignment:
Q  7 gttaacctgatgaattgataatactatgaggtcagaacttttgatg 52  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||||||    
T  41051263 gttaatctgatgaattgatgatactatgaggactgaacttttgatg 41051308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 18514771 - 18514819
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||||||||    
T  18514771 ttaacttcatcaaaaaagtcattctcatgacttcactataaaattttcc 18514819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8038 - 7889
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||| | |||| ||||||||    
T  8038 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttata 7939  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  7938 gtgttaacttcatcaaaaaagtcattcttataacttcaccatagaatttt 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 47481664 - 47481511
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||| |||||||||||| ||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  47481664 agtcttgttaacatgatgaattgatgatactatgagggctaaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttata 47481565  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||  |||||| |||||||||||| || ||||||||||    
T  47481564 gtgttaacttcaccaaaaacatcattcctatgacttcaccataaaattttcctt 47481511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 26941294 - 26941446
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |||||||||| || |||| |||||| | ||||||||||||||||| |||||| ||||||||||||||||||||| |||| || |||||    
T  26941294 agtcttgttaatctgatgaattaatgataccatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttata 26941393  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  26941394 gtgttaacttcaccaaaaaaatcattcttatgacttcaccatagaattttcct 26941446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 3655238 - 3655388
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||    
T  3655238 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagt 3655337  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||| | ||||||||||||| ||||||||||||| || |||||||||    
T  3655338 gttaactttatcaaaaaagtcatttttatgacttcaccataaaattttcct 3655388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 51213015 - 51213166
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||||| |  ||||||||||| |||| |||||| ||||||||||| ||||||| ||||||||||||| |    
T  51213015 agtcttgttaatctgatgagttgatgatactatgaggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttaca 51213114  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  51213115 gtgttaacttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 51213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 40552297 - 40552445
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||||||||| ||| ||||||| | ||||||||||||||||| ||||||  |||| ||||||||||||| |||||| ||||||||||||    
T  40552297 ttgttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgt 40552396  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  40552397 taacttctccaaaaaagtcattctcatgacttcaccatagaattttcct 40552445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 21009836 - 21009992
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  21009836 agtcttgttaacctgatgaattgatgataatatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattacatttttgatgttata 21009935  T
Q  101 gtgttaacttcac---caaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||| || |||||    |||||| |||||||||| |||||||| || ||||||||||    
T  21009936 gtgtcaaattcacaaaaaaaaaaatcattcttataacttcaccataaaattttcctt 21009992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 48355083 - 48354930
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||| ||||| ||||||||||  | |||||||||||| |||| |||||| | ||||||||||||||||| |||||| || |||||    
T  48355083 agtcttgttaatctgatgagttgatgatactatgagaactgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattata 48354984  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||||| |||| ||||||| ||||||||||| |||||||||||||    
T  48354983 gtgttaacttcaccataaaaatcattctcatgacttcaccatagaattttcctt 48354930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 20373330 - 20373481
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| |||| |||||  | ||||||||||||||||| |||||| ||||||||||||||| ||| |||||| ||||||||    
T  20373330 agtcttgttaatttgatgaattgatgataccatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttata 20373429  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    || ||||||||||||||||| ||||||||||||||||||  || ||||||||    
T  20373430 gtattaacttcaccaaaaaaatcattcttatgacttcactataaaattttcc 20373481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 37203209 - 37203058
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| || |||||||||| ||||||||||| | |||||||||||| || | |||||| |||||||||||||||| || | |||| ||||||||    
T  37203209 agtcttgttaatcttatgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttata 37203110  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| ||||||| ||||| ||||||||||||| |||||||||||    
T  37203109 gtgttaacttcatcaaaaaaatcatttttatgacttcaccatagaattttcc 37203058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 54505949 - 54505799
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||||| |||| ||| || ||||||||||| | ||| |||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||    
T  54505949 agtcttgttaacccgatgtatttatgatactatgagg-ctgaatttttgatgtcattctataaataatggggtgttactcattacatttttgatgttata 54505851  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| ||||||||||||||||  ||||||| | || ||||||||    
T  54505850 gtgttaacttcaacaaaaaagtcattcttgcgacttcatcataaaattttcc 54505799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 4015600 - 4015451
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||||||||||| | ||||||||||||||| |||||||| ||| ||||||||||||  | | |||| ||| ||||||    
T  4015600 tcttgttaatatgatgaattgatgatactatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagt 4015501  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||| || |||||||||||| ||||||||||| |||||||||||    
T  4015500 gttaacttcatcagaaaagtcattctcatgacttcaccatagaattttcc 4015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 35844466 - 35844315
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||| || |  |||||||||||||| | |||||| |||| |||||||||||  | ||||||  |||||||||    
T  35844466 tcttgttaatctgatgaattgatgatactatggggactaaacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagt 35844367  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| |||||||||| | ||||||||||| |||||||||||||    
T  35844366 gttaacttcaccagaaaagtcattatcatgacttcaccatagaattttcctt 35844315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 29099495 - 29099358
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| |||||| | || | ||||||| ||||||| | |||||| ||||||||||||||||  | |||||||||||||||||    
T  29099495 tcttgttaatatgatgaattgatgatactaaggggactgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagt 29099396  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  29099395 gttaacttcaccagaaaagtcattctaatgacttcacc 29099358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 46297800 - 46297945
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| || |||||||||| |||||| | || | |||||||||| | |||| |||||| ||||| |||||||||| ||||||||| ||||||||||||    
T  46297800 ttgttaatctaatgaattgatgatactacggggactgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgt 46297899  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||| |||||||||| | ||||||||||| |||||||||    
T  46297900 taacttcaccagaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 4761683 - 4761838
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| | ||||| ||||| ||||||||||| | ||||||||||||||||| |||||| ||||  ||||||||||||| |||||| || |||||    
T  4761683 agtcttgttaatcagatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattata 4761782  T
Q  101 gtgttaacttcacc--aaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    || |||||||||||  |||||||||| ||| |||| |||||| |||||||||||||    
T  4761783 gtattaacttcaccaaaaaaaagtcaatctcatgaattcaccatagaattttcctt 4761838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 7327518 - 7327669
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| | ||||||||||| |||||||| || | ||||||||||||||| | |||||||| ||| ||||||||||  | | |||| ||||||||||    
T  7327518 tcttgttaatccgatgaattgatgatactatggggactgaacttttgatgtcactgtacaaataatggagtgttactcacaacacttttgatgttatagt 7327617  T
Q  103 g-ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    | |||||||||| |||||||||||||| || |||||||| ||||||||||||    
T  7327618 gtttaacttcactaaaaaagtcattctcataacttcaccatagaattttcct 7327669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 11357398 - 11357555
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtgggg-tgttactcattatattttttatgttat 99  Q
    ||||||||||| ||||||||||||| ||||||||| | | ||||||||||||  | | |||||| ||||||| ||||||||| |||| |||| ||| |||    
T  11357398 agtcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctat 11357497  T
Q  100 agtgttaacttcaccaaaaaagtcattcttatga---cttcaccgtagaattttcctt 154  Q
    |||||||||||||||| |||||||||||| ||||   ||||||| |||||||||||||    
T  11357498 agtgttaacttcaccagaaaagtcattctcatgacttcttcaccttagaattttcctt 11357555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 22446111 - 22446247
Alignment:
Q  14 tgatgaattgataatactatgagg-tcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttca 112  Q
    |||||||||||| ||||||||||| |  |||||||||||| || | |||||| |||||||||||||||| ||||||||| ||| |||| |||||||||||    
T  22446111 tgatgaattgatgatactatgagggtttgaacttttgatgccactgtacaaa-agtggggtgttactcactatatttttgatgatataatgttaacttca 22446209  T
Q  113 cc-aaaaaagtcattcttatgacttcaccgtagaattt 149  Q
    || |||||||||||| | ||||||||||||||||||||    
T  22446210 ccaaaaaaagtcattttcatgacttcaccgtagaattt 22446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 42506109 - 42506214
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| |||||||| |||||||||| | |||| ||||||||    
T  42506109 agtcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtattactcattacaattttgatgttata 42506208  T
Q  101 gtgtta 106  Q
    ||||||    
T  42506209 gtgtta 42506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 3362395 - 3362243
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||| |||||||||||| |||| ||||||   |||||||||||| || | ||||||||||||| ||||||||| ||||||| | ||| ||||    
T  3362395 agtcttgttaacatgatgaattgatgataccatgaggagtgaacttttgatgccactgtacaaatagtgggatgttactcactatatttctgatgctata 3362296  T
Q  101 gtgttaacttcaccaa-aaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||| |||||| ||| | || | |||||||||||| |||||    
T  3362295 gtgttaacttcaccaaaaaaagttattttcataatttcaccgtagaactttcc 3362243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 21193746 - 21193595
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| |||||||||| || |||| ||| || | ||||||||||||||| |||||||| ||||||||||||||||  | | |||| ||   | |||    
T  21193746 tcttgttaatctgatgaattaatgataccatggggactgaacttttgatgtcactctacaaacagtggggtgttactcacaacacttttgattcaacagt 21193647  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| |||||||||||| ||||||| ||| |||||||||||||    
T  21193646 gttaacttcaccagaaaagtcattctcatgactttaccatagaattttcctt 21193595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 37157849 - 37157699
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| || || ||||||| ||||||||| | | |||||||||||| || | |||||  |||||||||||||||| || | |||| ||||||||    
T  37157849 agtcttgttaatcttataaattgatgatactatgatgactgaacttttgatgccactgtacaac-agtggggtgttactcactacaattttgatgttata 37157751  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| |||||||| |||| | ||||||||||| |||||||||||    
T  37157750 gtgttaacttcatcaaaaaagccattttcatgacttcaccatagaattttcc 37157699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 52040958 - 52041109
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagt-ggggtgttactcattatattttttatgttatag 101  Q
    ||||||||| ||||||||||||| ||||||||| | | |||||||||||| || | |||||| | | |||| |||||||| || | |||| |||||||||    
T  52040958 tcttgttaatctgatgaattgatgatactatgatgactgaacttttgatgccactatacaaacatttggggagttactcactacacttttgatgttatag 52041057  T
Q  102 tgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    | |||||||||||| |||||||||||| |||||||||||  |||||||||||    
T  52041058 tattaacttcaccagaaaagtcattctcatgacttcacctcagaattttcct 52041109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22451110 - 22450957
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| |||||||| || | |||||||||||| ||   |||||| |||| |||| |||||| || | |||| ||| ||||    
T  22451110 agtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgccaccatacaaacagtgaggtgctactcactacacttttgatgctata 22451011  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||| ||||||||| |||| ||||||| ||||||||||| |||||||||||||    
T  22451010 gtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcctt 22450957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 34133065 - 34132924
Alignment:
Q  13 ctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttca 112  Q
    ||||||||||||| ||| |||| || | ||||||||||||||||| |||||| ||||||||||||||||  | |||||| ||  ||||||||||| ||||    
T  34133065 ctgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttca 34132966  T
Q  113 ccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||| |  ||||||||   |||||||||||||    
T  34132965 ccaaaaaagtcattttcgtgacttcattatagaattttcctt 34132924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 27480413 - 27480564
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| |||||||| || | |||||||||||||||   |||||| | | || || ||||||||||| |||| ||||||||    
T  27480413 agtcttgttaatatgatgaattgatgatactatggggactgaacttttgatgtcaccgtacaaacaattggatgctactcattatacttttgatgttata 27480512  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| |||| ||||||||  ||||||| ||||||||| | |||||||||||    
T  27480513 gtgttgactttaccaaaaatatcattctcatgacttcatcatagaattttcc 27480564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 11466964 - 11466814
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||| || |  ||||||||||| || | |||||| ||||||||||||||||  | | ||   ||||||||||    
T  11466964 tcttgttaatctgatgaattgatgatactatggggactaaacttttgatgccactgtacaaacagtggggtgttactcacaacacttgcgatgttatagt 11466865  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
     ||||||||| || |||||||||||| | ||||||||| ||||||||||||    
T  11466864 cttaacttcatcagaaaagtcattctcaagacttcaccatagaattttcct 11466814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 44186539 - 44186687
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    |||||||  |||||||||||| |||||||| || | ||||||||||||||| | || ||| || |||||||||||||  | | |||| ||| ||||||||    
T  44186539 ttgttaatttgatgaattgatgatactatggggactgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgt 44186638  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||| |||||||   ||||||| | ||||||||||||    
T  44186639 taacttcaccaaaaaaatcattctctcgacttcatcatagaattttcct 44186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 46994756 - 46994839
Alignment:
Q  72 gtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttca 156  Q
    ||||||||||||| |||||  |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  46994756 gtgttactcattacattttg-atgttatagtattaacttcaccaaaaaaatcattcttacgacttcaccgtagaattttccttca 46994839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 40936131 - 40935995
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||| | || ||| | || ||||||||||   | | |||| ||| ||||||    
T  40936131 tcttgttaatctgatgaatagatgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatagt 40936032  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcac 139  Q
    ||||||||||||| |||| ||||||| ||||||||||    
T  40936031 gttaacttcaccagaaaaatcattctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 33378819 - 33378969
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |||||||||||||||||||||| || | |||||||||||||||   |||||||| ||||||  |||||| || | |||| ||  ||||    
T  33378819 agtcttgttaatctgatgaattgataatactatggggactgaacttttgatgtcaccgtacaaatattggggtactactcactacacttttgatactata 33378918  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||| |||||||   |||||||||||| || ||||  || |||||||||||||    
T  33378919 gtgttgacttcac---aaaagtcattctcataactttgccatagaattttcctt 33378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 43975926 - 43976068
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||||||||| ||| |||||||    |||||||||||||||  |||||||||||| ||| |||||| || | |||| ||| ||||||||    
T  43975926 ttgttaatctgatgaattgatgatattatgaggattaaacttttgatgtcatcgtacaaatagtggagtgctactcactacacttttgatgctatagtgt 43976025  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    | ||||   ||||||||||||||| ||||||||||| || ||||||    
T  43976026 tgactt---caaaaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 54828735 - 54828883
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||| |  |||||||||||| || |||||| |   ||| |||||||||| || |  |||  |||||||||||||||||| ||||| |||||||||    
T  54828735 agtcttgttcatatgatgaattgatgatgctatgaagaatgaatttttgatgtcgttgtttaaacggtggggtgttactcattacatttt-tatgttata 54828833  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||| ||||||||| | ||| ||||||||||||| || ||||||    
T  54828834 gtgttaactttaccaaaaaaattatttttatgacttcaccataaaatttt 54828883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 45174645 - 45174494
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcatt--atattttttatgttata 100  Q
    ||||||||| ||||||||||||| |||||||| || | ||||||||||||  | | |||||| ||||  ||||||||||    | | |||| ||||||||    
T  45174645 tcttgttaatctgatgaattgatgatactatggggactgaacttttgatgctactgtacaaacagtgaagtgttactcacacaacacttttgatgttata 45174546  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||| ||||| |  |||||||| || ||||||||    
T  45174545 gtgttaacttcaccaaaaaagttattctcacaacttcaccataaaattttcc 45174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 24488998 - 24489148
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||||| ||| |||| || | ||||||||||||||||| | |||| |||||  |||||||||  | |||||| ||  ||||||    
T  24488998 tcttgttagtctgatgaattgatgataatatggggactgaacttttgatgtcattgtgcaaacagtggaatgttactcacaacatttttaatactatagt 24489097  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
     |||||||||| |||||| ||||| |  |||||||||||||| |||||||||    
T  24489098 cttaacttcacaaaaaaaatcattttcgtgacttcaccgtag-attttcctt 24489148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 39282794 - 39282642
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||| ||| ||| ||||||  | |||||||||||| || | || ||| |||||||| |||||||  | | |||| ||||||||    
T  39282794 agtcttgttaatctgatgaatggatgataatatgagaactgaacttttgatgccactgtataaacagtggggtattactcac-acagttttgatgttata 39282696  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||| || | || |||| ||||| | ||||||||||| |||||||||||||    
T  39282695 gtgttaattttatcagaaaaatcattttcatgacttcaccatagaattttcctt 39282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 44891583 - 44891498
Alignment:
Q  66 agtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||| |||||||||  | | |||| ||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||    
T  44891583 agtgggatgttactcacaacacttttgatgttatagtgttaacttcacca-aaaagtcattttcatgacttcaccgtataattttcc 44891498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 11835737 - 11835790
Alignment:
Q  98 atagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  11835737 atagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 11835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 40640634 - 40640686
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttca 156  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttccttca 40640686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 53176194 - 53176127
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtgg 70  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||||| ||| |||||| |||||    
T  53176194 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgttattgtacaaacagtgg 53176127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 41585407 - 41585449
Alignment:
Q  67 gtggggtgttactcattatattttttatgttatagtgttaact 109  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  41585407 gtggggtgttactcattatatttttgatgttatagtgttaact 41585449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 53229186 - 53229336
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtg-gggtgttactcattatattttttatgttat 99  Q
    ||||||||||| ||||||||||||| ||| ||||| | | ||||||||||||  | | |||||| | || ||||||| |||| || | |||| ||| |||    
T  53229186 agtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgcaactgtacaaacattgagggtgttgctcactacacttttgatgctat 53229285  T
Q  100 agtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||| ||||||| |||| | ||| | ||||||||||| || ||||||    
T  53229286 agtgttaatttcaccagaaaaataattttcatgacttcaccttaaaatttt 53229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 55343401 - 55343471
Alignment:
Q  84 atattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||| || ||||||||||||||||| || |||||||||| |  |||||||||| |||||||||||||    
T  55343401 atatttttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttcctt 55343471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 2008073 - 2007964
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| || ||||| ||   |||||||||||| || | |||||| ||||||||||||||||  | | |||| | | ||||||    
T  2008073 tcttgttaatctgatgaattgatgatgctatggggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttaacgctatagt 2007974  T
Q  103 gttaacttca 112  Q
    ||||||||||    
T  2007973 gttaacttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 2613971 - 2613895
Alignment:
Q  62 aaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttca 138  Q
    |||||||| |||||||||||  | | ||||  ||||||||||||||||||| ||||||||||||| | |||||||||    
T  2613971 aaatagtgtggtgttactcacaacacttttggtgttatagtgttaacttcaacaaaaaagtcattttaatgacttca 2613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 53811976 - 53812024
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||| || |||||||||||| |||||||||||||||||||||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattttcc 53812024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24708151 - 24708295
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||| | | ||||||||||||||| | |||  | |||| ||||||||||| |  | |||| ||||||      
T  24708151 agtcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtac--acagtgaggtgttactcactgcagttttgatgtta-c 24708247  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||| |||  |||||||||||| | || |||||||| || ||||||    
T  24708248 gtgttaacatca--aaaaaagtcattttgataacttcaccataaaatttt 24708295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 14586706 - 14586784
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactca 81  Q
    ||||||||| ||||||||||||| |||||| | || || |||||||||| ||| | || |||||||| |||||||||||    
T  14586706 tcttgttaatctgatgaattgatgatactaaggggacaaaacttttgatatcactgtataaatagtgaggtgttactca 14586784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 38392628 - 38392678
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||| ||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccatataatttccctt 38392678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 29163895 - 29163839
Alignment:
Q  95 gttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||||||||||||| |||| ||||| | ||||||||||| || |||||||    
T  29163895 gttatagtgttaacttcaccagaaaaatcattttaatgacttcaccataaaattttc 29163839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 49359628 - 49359676
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||| |||||||||||| | ||||||||||| |||||||||||    
T  49359628 ttaacttcacaaaaaaagtcattttcatgacttcaccatagaattttcc 49359676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 19606914 - 19606961
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||||||| |||||||||| |||| |||||||| ||||||||||    
T  19606914 ttaacttcaccagaaaagtcatttttataacttcaccatagaattttc 19606961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 33698263 - 33698183
Alignment:
Q  68 tggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||||  | |||||| ||||||||||||||||||||| | | |    ||||| ||||||||||| |||||||||||    
T  33698263 tggggtgttactcacaacatttttgatgttatagtgttaacttcactagaga----attctcatgacttcaccatagaattttcc 33698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 48155220 - 48155267
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||| | | |||||||||||||||||| ||||    
T  48155220 acttcaccaaaaaagtcattttaacgacttcaccgtagaatttccctt 48155267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 42665541 - 42665591
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||||||| ||||| | || |||||||| |||||||||||||    
T  42665541 ttaacttcaccaaaaaaatcattatcataacttcaccatagaattttcctt 42665591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 43348322 - 43348281
Alignment:
Q  110 tcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  43348322 tcaccaaaaaaatcattctcatgacttcaccatagaattttc 43348281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 45879498 - 45879547
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||| |||| |||||||||||| ||||||||| | ||||||||||||    
T  45879498 ttaactttaccagaaaagtcattctcatgacttcagcatagaattttcct 45879547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 18272236 - 18272272
Alignment:
Q  117 aaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||| |||||||||||||| |||||||||    
T  18272236 aaaagtcattctcatgacttcaccgtataattttcct 18272272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46994695 - 46994751
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcatt 57  Q
    ||||||||||| |  |||| ||||| ||||||||||| | |||||||||||||||||    
T  46994695 agtcttgttaatcatatgagttgatgatactatgaggactgaacttttgatgtcatt 46994751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 47930666 - 47930714
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||| |||| ||||| | ||||||||||| |||||||||||    
T  47930666 ttaacttcaccagaaaaatcattttcatgacttcaccatagaattttcc 47930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 5e-42; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 22255333 - 22255178
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatatttttt-atgttat 99  Q
    ||||||||||| ||||||||||||| ||| ||||||  | |||||||||||| |||| ||||||  |||||||||||||||||| ||||||| |||||||    
T  22255333 agtcttgttaatctgatgaattgatgataatatgagaactgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttat 22255234  T
Q  100 agtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    | ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  22255233 aatgttaacttcaccaaaaaagttatttttatgacttcaccgtagagttttccttc 22255178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 5112337 - 5112490
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  | |||||||||| |||||||| || | |||||||||||| || | |||||| |||||||||||||||| ||||||||||||||||||    
T  5112337 agtcttgttaatttaatgaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttata 5112436  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    || ||||||||||||||||||||||| | ||||||||||| || ||||||||||    
T  5112437 gtattaacttcaccaaaaaagtcattttcatgacttcaccataaaattttcctt 5112490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 24886255 - 24886100
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||| ||||| ||||||||||| | ||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||    
T  24886255 agtcttgttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttata 24886156  T
Q  101 gtgttaacttcaccaa--aaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    || |||||||||||||  |||||||||||| |||| |||||| || ||||||||||    
T  24886155 gtattaacttcaccaaaaaaaagtcattctcatgatttcaccataaaattttcctt 24886100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 30969350 - 30969501
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| || ||||||||||||||||||||  | | |||| ||||||||||    
T  30969350 tcttgttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagt 30969449  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| | || ||||||| |||||||||  ||||||||||||||    
T  30969450 gttaacttcaccagataaatcattctcatgacttcattgtagaattttcctt 30969501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31705636 - 31705785
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||| |||| | | ||||||||||||||| ||||||  || ||||||||||| ||| |||||| ||||||||    
T  31705636 agtcttgttaatctgatgaattgatgatacta-gaggactggacttttgatgtcattgtacaaacggtagggtgttactcgttacatttttgatgttata 31705734  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  31705735 gtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttc 31705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 699301 - 699152
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||| ||||| | | ||||||||||||||| | |||||| |||||||||||||||| || |||||||||| ||||    
T  699301 agtcttgttaatctgatgaattgatgatattatgatgactgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctata 699202  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||||||| || |||||||||||| || |||||||| || ||||||    
T  699201 gtgttaacttcatcagaaaagtcattctcataacttcaccataaaatttt 699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 27318511 - 27318660
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||| ||||  |  |||||||||||||||| |||||| ||||| |||||||||| || |||||||||||| ||    
T  27318511 agtcttgttaatatgatgaattgatgatactgtgagaactaaacttttgatgtcattgtacaaacagtggtgtgttactcactacattttttatgtttta 27318610  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||||| |||| ||||||| ||||||||||||| |||||||    
T  27318611 gtgttaacttcaccagaaaaatcattctcatgacttcaccgttgaatttt 27318660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 12910506 - 12910347
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctac-----aaatagtggggtgttactcattatattttttatg 95  Q
    |||| |||||| ||||||||||||  ||||||||||| | ||||||||||||||| | |||     ||| ||||||||||||| || ||||||||| |||    
T  12910506 agtcatgttaatctgatgaattgacgatactatgaggactgaacttttgatgtcactgtactgtacaaacagtggggtgttacgcactatatttttgatg 12910407  T
Q  96 ttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  12910406 ttatagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttccttc 12910347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 7208888 - 7209037
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||| |||| | ||||||||||||||| | ||||||  || ||||||||||| ||  ||||||||||||| |    
T  7208888 agtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatgtcaatgtacaaacggtagggtgttactcgttgcattttttatgttaca 7208986  T
Q  101 gtgttaacttcacc-aaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
     ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  7208987 atgttaacttcaccaaaaaaagtcatttttatgacttcaccgtagaatttt 7209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17158055 - 17158209
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| |||||||||| || ||||||| | | | ||||||||||||||||| ||||||  |||| ||||||||||||| |||||||||||||||    
T  17158055 agtcttgttaatctgatgaattaatgatactataatgac-gaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttata 17158153  T
Q  101 gtgttaacttcac---caaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||    |||||| ||||| ||||||||||||| ||||||||||||    
T  17158154 gtgttaacttcacaaaaaaaaaaatcatttttatgacttcaccatagaattttcct 17158209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 22974106 - 22974259
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||  ||||||| ||||| ||| ||||||    ||||||||||||| ||| |||||| |||||| ||||||||||||  ||||| ||||||||    
T  22974106 agtcttgttattctgatgagttgatgataatatgagaattgaacttttgatgttattgtacaaacagtgggatgttactcattacttttttgatgttata 22974205  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||||||||| ||||||| || |||||||| |||||||||||||    
T  22974206 gtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattttcctt 22974259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1429169 - 1429321
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||||||||  |||||||||||| ||||||||  | | ||| |||||||| || | |||||| |||||||||||||||| ||||||||| ||| ||||    
T  1429169 agtcttgttaatttgatgaattgatgatactatggagactgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctata 1429268  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||| ||||||| | ||||||||||| |||| |||||||    
T  1429269 gtgttaacttcaccaaaagagtcattttcatgacttcaccatagatttttcct 1429321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 19120008 - 19119857
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| | |||||| || | ||||||||||||||| | |||||| ||||||||||||||    | | |||| ||| ||||||    
T  19120008 tcttgttaatctgatgaattgatgacactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagt 19119909  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  19119908 gttaacttcaccacaaaagtcattctcatgacttcaccatagaattttcctt 19119857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 38528261 - 38528413
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||  | ||||||||||||||| | || ||| | ||||||||||||||||| | |||| ||||||||    
T  38528261 agtcttgttaatctgatgaattgatgatactatgaga-ctgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttata 38528359  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| || ||||  |||| | ||||||||||| |||||||||||||    
T  38528360 gtgttaacttcatcagaaaaaccattttcatgacttcaccatagaattttcctt 38528413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 36860561 - 36860421
Alignment:
Q  14 tgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcac 113  Q
    |||||||||| | |||||||| || | ||||||||||||||||| |||||| ||||||||||||||||  | |||||||||  |||||||||||||||||    
T  36860561 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcac 36860462  T
Q  114 caaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    || |||| ||||| |  |||||||||| |||||||||||||    
T  36860461 cagaaaaatcattttcgtgacttcaccatagaattttcctt 36860421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 26268223 - 26268076
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||| || |  ||||||||||||||   |||||| ||||||||||||||||  | | |||| ||| ||||||    
T  26268223 tcttgttaatctgatgaattgatgatactatgtggactaaacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagt 26268124  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    ||||||||||||| |||| ||||||| |||||||||| ||||||||||    
T  26268123 gttaacttcaccagaaaaatcattctcatgacttcactgtagaatttt 26268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 14919556 - 14919706
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    |||||||  |||||| ||||| ||||||||||| | ||||||||||||||||| || ||| |||| |||||||||||||| |||||| |||||||| |||    
T  14919556 ttgttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgt 14919655  T
Q  105 taacttca-ccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||| | |||||| | ||||| ||||||||||| || ||||||||||    
T  14919656 taacttcatcaaaaaaaataattctcatgacttcaccatataattttcctt 14919706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22980944 - 22980794
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||||| || | |||||||||||||||||   |||| |||||||| ||||||| | ||||||| ||  ||||    
T  22980944 agtcttgttaatctgatgaattgatgatactatggggactgaacttttgatgtcattgctcaaacagtggggtattactcactgtatttttgatactata 22980845  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||||||| |||||||||||| || |||||| | || |||||||    
T  22980844 gtgttaacttcaccagaaaagtcattctcataacttcatcataaaattttc 22980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 35826522 - 35826660
Alignment:
Q  16 atgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcacca 115  Q
    ||||| |||| ||||||||||| | ||||||||||||||| | |||||| | ||  |||||||||| || |||||| |||||||||| |||||||||| |    
T  35826522 atgaactgatgatactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaa 35826621  T
Q  116 aaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||| | ||||||||||| |||||||||||||    
T  35826622 aaaaagtcattatcatgacttcaccatagaattttcctt 35826660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 39572968 - 39572818
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| |||||||||| || ||||||||||  | ||||||||||||||| |  ||||| ||||| ||||||||||  | ||||||||| |||||||    
T  39572968 tcttgttaatctgatgaatttatgatactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagt 39572869  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
     ||||||| || | |||||||||||| ||||||||||| ||||||||||||    
T  39572868 attaacttaactagaaaagtcattctcatgacttcaccatagaattttcct 39572818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 15724637 - 15724490
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||| |||| || | ||||||| ||||||||| || ||| ||||||||||||||||  | | |||| ||||||||||    
T  15724637 tcttgttaatttgatgaattgatgatattatg-ggactgaacttt-gatgtcattgtataaacagtggggtgttactcacaaaacttttgatgttatagt 15724540  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||    
T  15724539 gttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcc 15724490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 36866911 - 36866762
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||| | |||||||  || | |||||||||||| |||| |||||| ||||||||||||||||  |||||||| || |||||||    
T  36866911 tcttgttagtctgatgaattgttgatactatcgggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagt 36866812  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| |||| ||||| |  |||||||||| |||||||||||    
T  36866811 gttaacttcaccagaaaaatcattttcgtgacttcaccatagaattttcc 36866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 5830034 - 5829897
Alignment:
Q  19 aattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatg----ttatagtgttaacttcacc 114  Q
    ||||||| ||||||||||| |  |||||||||||||||| ||||||  || ||||||||||||||| ||||||||||    ||||| |||||||||||||    
T  5830034 aattgatgatactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgttaattataatgttaacttcacc 5829935  T
Q  115 aaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||| ||||| ||| ||||||||| |||||||||||    
T  5829934 aaaaaaatcatttttacgacttcaccctagaattttcc 5829897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 8741912 - 8742064
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtgggg-tgttactcattatattttttatgttatag 101  Q
    |||||||||  |||||||||||| ||||||||  | | |||||||||||| |||| |||||| | ||||| |||||||||  | | |||| ||| |||||    
T  8741912 tcttgttaatttgatgaattgatgatactatggagactgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatag 8742011  T
Q  102 tgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  8742012 tgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 8742064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 5837704 - 5837557
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| ||||||||  | | ||| ||||||||||| | |||||| ||||||||||||||||  | | |||| ||| ||||||    
T  5837704 tcttgttaatatgatgaattgatgatactatggagactgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagt 5837605  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||| |||||||| |||||||||||| |||| ||||||||||||||||    
T  5837604 gttaccttcaccagaaaagtcattctcatgaattcaccgtagaatttt 5837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14409351 - 14409501
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| ||||||||||  | |||||||||||| ||   ||  || ||||||||| |||||| || |||||| ||||||||    
T  14409351 agtcttgttaatctgatgaattgatgatactatgaga-ctgaacttttgatgccaccgtattaagagtggggtgctactcactacatttttgatgttata 14409449  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||| ||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  14409450 gtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 14409501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 27330448 - 27330304
Alignment:
Q  8 ttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaa 107  Q
    |||| ||||||||||||| ||||||||| | | |||||||||||| |||| |||||| |||  |||||||||||  | | |||| |||||||||||||||    
T  27330448 ttaatctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaa 27330351  T
Q  108 cttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||| |||||||||||  | ||||||||| |||||||||||||    
T  27330350 cttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 27330304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31786670 - 31786821
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||||| |||||||||||   |||||||||||| || | |||||| |||||||   | |||| || |||||| ||| ||||    
T  31786670 agtcttgttaatctgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtggggcagtgctcactacatttttcatgctata 31786769  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||||||||||||||||| |  |||||||  |||||||||||    
T  31786770 gtgttaacttcaccaaaaaagtcattctcactacttcactatagaattttcc 31786821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 7693376 - 7693230
Alignment:
Q  6 tgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgtt 105  Q
    |||||| || |||||||||| |||||| ||||   |||||||||||| || | |||||| |||||| |||||||||  | | |||| |||||||||||||    
T  7693376 tgttaatctaatgaattgatgatactaagaggattgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgtt 7693277  T
Q  106 aacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||| |||||||||| | ||||||||||| |||||||||||    
T  7693276 aacttcaccagaaaagtcattttaatgacttcaccatagaattttcc 7693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 9200382 - 9200232
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| |||||| |||| |  |||||||||||||| | ||||||  |||||||||||||||  | | |||| ||||||||||    
T  9200382 tcttgttaatatgatgaattgatgatactaagaggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagt 9200283  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||| |||||| ||| | ||||||||||| || |||||||||    
T  9200282 gttaacttcaccagaaaagttattttaatgacttcaccataaaattttcct 9200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 26317774 - 26317859
Alignment:
Q  67 gtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||    
T  26317774 gtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttcc 26317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 40133534 - 40133385
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||| | ||| |||| || | |||||||||||| |||| |||||||||||||||||||||||  | |||||| ||  |||| |    
T  40133534 tcttgttagtctgatgaattgttgatattatggggactgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataat 40133435  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| |||||||||| |  |||||||||| |||||||||||    
T  40133434 gttaacttcaccacaaaagtcattttcgtgacttcaccatagaattttcc 40133385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 32563298 - 32563150
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||| || | || | ||||||||||||||| | |||| | ||||| ||||||||||  | | |||| ||||||||||    
T  32563298 tcttgttaatctgatgaattgatgatattaaggggactgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagt 32563199  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    |||||||||| || |||| ||||| | ||||||||||| ||||||||||    
T  32563198 gttaacttcatcagaaaaatcattttaatgacttcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 43308680 - 43308815
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||| ||||| ||||||||||| | |||||||||||| |||| ||| || ||| |||||||| |||||| |||||| |||||||| |||    
T  43308680 ttgttaagctgatgagttgatgatactatgaggactgaacttttgatgccattgtacgaacagt-gggtgttattcattacatttttgatgttataatgt 43308778  T
Q  105 taacttcac-caaaaaagtcattcttatgacttcacc 140  Q
    |||||| ||  |||||||||||||| |||||||||||    
T  43308779 taactttactaaaaaaagtcattctcatgacttcacc 43308815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 25500952 - 25501099
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| |||||||  || |  ||||||||||| || | |||||| |||| ||||||| |||  | | |||| ||| ||||||    
T  25500952 tcttgttaatctgatgaattgatgatactatagggacttaacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagt 25501051  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    |||||||| |||| |||||||||||| ||||||||||| |||||||||    
T  25501052 gttaactttaccagaaaagtcattctcatgacttcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 35511501 - 35511652
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||||||||| | ||| ||||| | | ||||||||||||||| | |||||| ||||| |||||||||| || | | || ||||||||    
T  35511501 agtcttgttaatctgatgaattggtgatagtatgatgactgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttata 35511600  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
     ||||||||||| || ||| |||||| | ||||||||||| ||| |||||||    
T  35511601 atgttaacttcatcagaaacgtcattttcatgacttcaccataggattttcc 35511652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 13956427 - 13956522
Alignment:
Q  59 tacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||| |||| ||||||||||| || | |||| ||||||||||||||||||||  | |||||||||| | |||||||||||||||||||||||||    
T  13956427 tacaaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcctt 13956522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 21088803 - 21088941
Alignment:
Q  14 tgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcac 113  Q
    |||||||||| | |||||||| || | ||||||||||||||||| |||||| |||||||||| |||||  | |||||||||  || ||| ||||||||||    
T  21088803 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgtcactcacaacattttttatactacagt-ttaacttcac 21088901  T
Q  114 c-aaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    | |||||||||||| |  |||||||| |||||||||||||    
T  21088902 caaaaaaagtcattttcgtgacttcatcgtagaattttcc 21088941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 23116250 - 23116397
Alignment:
Q  5 ttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgt 104  Q
    ||||||| ||||||||||||| ||||||||    | |||||||||||  || | |||||| ||||||||| |||||| || | |||| |||||||| |||    
T  23116250 ttgttaatctgatgaattgatgatactatgtaaactgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgt 23116349  T
Q  105 taacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||  |||||||||||| | ||||| ||||| |||||||||||    
T  23116350 taacttcataaaaaaagtcattttcatgacgtcaccatagaattttcc 23116397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 8466893 - 8466743
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  |||||||||||| |||||||| ||   |||||||||||  || | |||||| || ||||||||| |||  | | |||| |||||| |||    
T  8466893 tcttgttaatttgatgaattgatgatactatggggattgaacttttgataccactgtacaaagag-ggggtgttattcacaacacttttgatgttacagt 8466795  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||||||||||| |||||||||||| ||||| ||| | |||||||||||||    
T  8466794 gttaacttcaccagaaaagtcattctcatgacctcatcatagaattttcctt 8466743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33908384 - 33908245
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| ||||  ||||||| ||||||||||| | |||||||||||| ||   |||||| ||||| ||| |||||| || | |||| ||| ||||    
T  33908384 agtcttgttaatctgaataattgatgatactatgaggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatata 33908285  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcacc 140  Q
    ||||| ||||||||| |||  ||||||| |||||||||||    
T  33908284 gtgttgacttcaccagaaagttcattctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 22019781 - 22019632
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    |||||||||  ||||||| |||| |||||| | || |  |||||||||||||| | |||||| | ||||||||||||||  | | |||| ||  ||||||    
T  22019781 tcttgttaatatgatgaagtgatgatactaaggggacttaacttttgatgtcactatacaaacaatggggtgttactcacaacacttttgattctatagt 22019682  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
     |||||||||||| |||||||||||| || |||||||| ||||| |||||    
T  22019681 tttaacttcaccagaaaagtcattctaataacttcaccatagaaatttcc 22019632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 11898139 - 11898004
Alignment:
Q  15 gatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcacc 114  Q
    ||||||||||| ||||||||||| |  |||||||||||||| | ||||| |||| |||||||||||| |  | |||| ||| |||| | ||||||| |||    
T  11898139 gatgaattgatgatactatgaggactaaacttttgatgtcactgtacaactagtagggtgttactcagtgcacttttgatgctataatattaactttacc 11898040  T
Q  115 aaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    | |||||| ||| | ||||||||||| || ||||||    
T  11898039 agaaaagttattatcatgacttcaccctaaaatttt 11898004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 8437086 - 8436965
Alignment:
Q  32 atgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttat 131  Q
    |||||| | ||||||||||||||| | |||||| | |||| ||||||||| || | |||  | | ||||||||||| |||||||||||| ||||||| ||    
T  8437086 atgaggactgaacttttgatgtcactgtacaaacaatgggatgttactcactacactttggaagctatagtgttaatttcaccaaaaaaatcattctcat 8436987  T
Q  132 gacttcaccgtagaattttcct 153  Q
    ||||||||  ||||||| ||||    
T  8436986 gacttcacattagaattgtcct 8436965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 16004485 - 16004552
Alignment:
Q  86 attttttatgttatagtgttaacttcaccaaaaaagtc-attcttatgacttcaccgtagaattttcc 152  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| ||||||| ||| |||||||||||    
T  16004485 atttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattttcc 16004552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 22255659 - 22255608
Alignment:
Q  68 tggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaa 119  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  22255659 tggggtgttactcattacatttttgatgttatagtgttaacttcatcaaaaa 22255608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 15992566 - 15992636
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggt 73  Q
    ||||||||| ||||||||||||| ||||||||| | | ||||||||||||||| | |||||| ||||||||    
T  15992566 tcttgttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtacaaacagtggggt 15992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 5748520 - 5748442
Alignment:
Q  67 gtggggtgttactcattatattttttatgttatagtgtt-------aacttcaccaaaaaagtcattcttatgacttca 138  Q
    ||||||||||||||||||||||||| | |||||||||||       ||||||||||||||||||||| | |||||||||    
T  5748520 gtggggtgttactcattatatttttgacgttatagtgttaactgttaacttcaccaaaaaagtcattttcatgacttca 5748442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 25668798 - 25668687
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| || |||||||||| |||||| | || | |||||||||||| || | | |||| ||||||||||||||||  | | |||| |||||| |||    
T  25668798 tcttgttaatctaatgaattgatgatactaaggggactgaacttttgatgccactgttcaaacagtggggtgttactcacaacacttttgatgtta-agt 25668700  T
Q  103 gttaacttcacca 115  Q
    |||||||||||||    
T  25668699 gttaacttcacca 25668687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 28416553 - 28416696
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||| ||||||||||||| ||| || |  |   |||||||||||  || | |||||| |||||| |||||||||  ||| |||| || |||||||    
T  28416553 tcttgttaatctgatgaattgatgatattaaggagattgaacttttgattccactgtacaaacagtgggatgttactcacaatacttttgatattatagt 28416652  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||| ||     ||||||| ||||||||||| ||||||||||    
T  28416653 gttaacttcactaa-----tcattctaatgacttcaccatagaattttc 28416696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 35933957 - 35933901
Alignment:
Q  97 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||| || |||||||||    
T  35933957 tatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattttcct 35933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 12164914 - 12164965
Alignment:
Q  102 tgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||| | ||||||||||||||| |||||||||||||| |||||||||    
T  12164914 tgttaactttagcaaaaaagtcattctcatgacttcaccgtaaaattttcct 12164965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 22616542 - 22616492
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    |||||||||||| |||||||||| | ||||||||||| |||||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttcctt 22616492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 35504236 - 35504168
Alignment:
Q  86 attttttatgttatagtgttaa---cttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||||||||| ||||||   ||||||||||||| ||||| ||||||||||| | ||||||||||    
T  35504236 attttttatgttataatgttaataacttcaccaaaaaaatcatttttatgacttcaacatagaattttc 35504168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 26411338 - 26411293
Alignment:
Q  107 acttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  26411338 acttcaccaaaaaaatcattctaatgacttcaccatagaattttcc 26411293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35504516 - 35504427
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatatttt 90  Q
    |||||||||||  |||||||||||| ||||||| | |   ||||||||||||||||  ||||||  ||| |||||||||||||| |||||    
T  35504516 agtcttgttaatatgatgaattgatgatactataatgattgaacttttgatgtcatcatacaaacggtgaggtgttactcattacatttt 35504427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 21320799 - 21320752
Alignment:
Q  104 ttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttc 151  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||||||||    
T  21320799 ttaacttcatcaaaaaagtcatttttattacttcaccatagaattttc 21320752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 6824505 - 6824585
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaac--ttttgatgtcattctacaaatagtggggtgttactca 81  Q
    ||||||||| ||||| ||||||| ||||||||| | | ||||  ||||||||||| | |||||| ||||| ||||||||||    
T  6824505 tcttgttaatctgataaattgatgatactatgaagactgaacacttttgatgtcactgtacaaacagtggagtgttactca 6824585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 44108 - 43959
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||| |||| ||||||||||||| ||||||||||| | |||||||| ||| |||| |||||| |  |||||||||||||||| |||||| || |||||    
T  44108 agtcttattaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattata 44009  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    | ||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  44008 gcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 43959  T

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Target: scaffold0017 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 154679 - 154828
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    |||||| |||| ||||||||||||| ||||||||||| | |||||||| ||| |||| |||||| |  |||||||||||||||| |||||| || |||||    
T  154679 agtcttattaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattata 154778  T
Q  101 gtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaatttt 150  Q
    | ||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  154779 gcgttaacttcaccaaaaaagtctttcttacgacttcaccatagaatttt 154828  T

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Target: scaffold0002 (Bit Score: 71; Significance: 7e-32; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 283 - 133
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagt 102  Q
    ||||||||  ||||||||||||| ||||||||||| | |||||||||||| |||| |||||| ||||| ||||||||||  | |||||||||  || |||    
T  283 tcttgttagtctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagt 184  T
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    ||||||||||||| |||||||||| |  |||||||||| ||||||||||||    
T  183 gttaacttcaccagaaaagtcattttcgtgacttcaccatagaattttcct 133  T

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Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 94417 - 94542
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttata 100  Q
    ||||||||||| || |||||||||| ||| |||| || |  ||||||||||| || | |||||| |||||||||||||||| || | |||| ||||||||    
T  94417 agtcttgttaatctcatgaattgatgatagtatggggaccaaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttata 94516  T
Q  101 gtgttaacttcaccaaaaaagtcatt 126  Q
     ||||||||||| || ||||||||||    
T  94517 atgttaacttcatcagaaaagtcatt 94542  T

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Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 408702 - 408757
Alignment:
Q  100 agtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttccttc 155  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  408702 agtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttccttc 408757  T

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Target: scaffold0002; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 408463 - 408559
Alignment:
Q  1 agtcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgtta 98  Q
    ||||||||||| ||||||||||||| |||||| |||| | ||||||||||| ||||| ||||||  ||  |||||||||||||| |||||| ||||||    
T  408463 agtcttgttaatctgatgaattgatgatacta-gaggactgaacttttgatttcattttacaaacggtaaggtgttactcattacatttttgatgtta 408559  T

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Target: scaffold0009 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 42439 - 42347
Alignment:
Q  61 caaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcct 153  Q
    |||||||||||||||||||||  | | |||| ||||||||||||||||||||||| |||| | ||||| ||||||||||| || |||||||||    
T  42439 caaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttcct 42347  T

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Target: scaffold0009; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 100886 - 100819
Alignment:
Q  87 ttttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcctt 154  Q
    ||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  100886 tttttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcctt 100819  T

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Target: scaffold0318 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 12058 - 11908
Alignment:
Q  3 tcttgttaacctgatgaattgataatactatgaggtcagaacttttgatgtcattc-tacaaatagtgggg-tgttactcattatattttttatgttata 100  Q
    ||||||||| ||||||||||||| ||| ||||||| | |||||||||||  || |  |||||| | ||||| |||||||||  | | |||| |||||||     
T  12058 tcttgttaatctgatgaattgatgatattatgaggactgaacttttgataccactgatacaaacaatgggggtgttactcacaacacttttaatgttatg 11959  T
Q  101 gtgttaacttcaccaaaaaagtca-ttcttatgacttcaccgtagaatttt 150  Q
    ||||||| ||||||| |||||||| |||| ||||||||||| |||||||||    
T  11958 gtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaatttt 11908  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 12137 - 12186
Alignment:
Q  103 gttaacttcaccaaaaaagtcattcttatgacttcaccgtagaattttcc 152  Q
    ||||||||||||| |||||||||||| || |||||| | |||||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattttcc 12186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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