View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14464_high_35 (Length: 249)

Name: NF14464_high_35
Description: NF14464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14464_high_35
NF14464_high_35
[»] chr2 (20 HSPs)
chr2 (85-232)||(36864059-36864206)
chr2 (1-85)||(36749988-36750072)
chr2 (1-87)||(13455671-13455757)
chr2 (1-86)||(13461613-13461698)
chr2 (1-86)||(35085181-35085266)
chr2 (1-85)||(35091154-35091238)
chr2 (1-86)||(30964901-30964985)
chr2 (1-85)||(13150191-13150274)
chr2 (1-85)||(31001951-31002034)
chr2 (1-86)||(35439872-35439956)
chr2 (3-83)||(19879170-19879250)
chr2 (1-81)||(23283821-23283901)
chr2 (1-85)||(44717307-44717390)
chr2 (19-85)||(11049012-11049078)
chr2 (1-82)||(23343140-23343221)
chr2 (1-86)||(28683446-28683530)
chr2 (1-60)||(35442334-35442393)
chr2 (19-85)||(28765174-28765240)
chr2 (2-78)||(25233042-25233118)
chr2 (1-35)||(7771688-7771722)
[»] chr5 (19 HSPs)
chr5 (1-87)||(32097523-32097609)
chr5 (1-85)||(12692782-12692866)
chr5 (1-86)||(32094723-32094808)
chr5 (1-78)||(12686680-12686757)
chr5 (1-94)||(7390049-7390141)
chr5 (1-85)||(20499712-20499796)
chr5 (1-86)||(28525887-28525971)
chr5 (1-86)||(41296853-41296937)
chr5 (1-85)||(28531983-28532066)
chr5 (1-85)||(30384885-30384969)
chr5 (1-86)||(14609706-14609789)
chr5 (1-84)||(33753732-33753815)
chr5 (9-86)||(30771855-30771933)
chr5 (1-86)||(26509431-26509515)
chr5 (14-77)||(25408476-25408539)
chr5 (5-86)||(19060279-19060360)
chr5 (12-85)||(19066620-19066693)
chr5 (3-84)||(33849365-33849446)
chr5 (1-29)||(8706888-8706916)
[»] chr3 (29 HSPs)
chr3 (1-86)||(10238714-10238799)
chr3 (1-86)||(11840227-11840312)
chr3 (1-86)||(42191722-42191807)
chr3 (1-85)||(10244836-10244920)
chr3 (1-85)||(17056293-17056377)
chr3 (1-85)||(42197664-42197748)
chr3 (1-88)||(55003903-55003990)
chr3 (1-85)||(26429919-26430003)
chr3 (1-85)||(11846479-11846562)
chr3 (1-86)||(9586514-9586598)
chr3 (1-86)||(10761152-10761236)
chr3 (1-85)||(10769471-10769554)
chr3 (1-85)||(23138918-23139001)
chr3 (1-85)||(30051602-30051685)
chr3 (1-85)||(38456052-38456135)
chr3 (1-86)||(38449565-38449649)
chr3 (1-86)||(49151186-49151270)
chr3 (1-86)||(49157253-49157337)
chr3 (1-85)||(8331362-8331445)
chr3 (1-86)||(24643992-24644077)
chr3 (1-86)||(17602035-17602120)
chr3 (3-60)||(28964479-28964536)
chr3 (12-85)||(8474648-8474721)
chr3 (1-85)||(2982728-2982812)
chr3 (1-85)||(34300012-34300096)
chr3 (1-79)||(12109168-12109246)
chr3 (12-44)||(46656306-46656338)
chr3 (1-46)||(52063348-52063392)
chr3 (1-41)||(53071753-53071793)
[»] chr1 (15 HSPs)
chr1 (1-86)||(25382037-25382122)
chr1 (1-85)||(1077818-1077902)
chr1 (1-85)||(50305771-50305855)
chr1 (1-86)||(12184098-12184183)
chr1 (1-78)||(25275548-25275625)
chr1 (1-85)||(25388004-25388088)
chr1 (1-86)||(31057618-31057702)
chr1 (1-85)||(31051119-31051202)
chr1 (3-87)||(34739559-34739642)
chr1 (1-69)||(44409590-44409658)
chr1 (1-86)||(24927270-24927355)
chr1 (1-85)||(8093347-8093431)
chr1 (1-85)||(27954735-27954819)
chr1 (1-86)||(33458411-33458493)
chr1 (1-85)||(24964206-24964289)
[»] chr8 (16 HSPs)
chr8 (1-85)||(36818546-36818630)
chr8 (1-86)||(32890461-32890546)
chr8 (1-86)||(32896585-32896670)
chr8 (1-85)||(42993501-42993585)
chr8 (1-86)||(1883339-1883424)
chr8 (1-86)||(5542663-5542747)
chr8 (1-86)||(39727786-39727870)
chr8 (1-85)||(9934857-9934941)
chr8 (1-86)||(14417535-14417619)
chr8 (1-86)||(22220229-22220312)
chr8 (1-85)||(42033372-42033455)
chr8 (1-86)||(10705412-10705496)
chr8 (1-85)||(10699604-10699687)
chr8 (1-85)||(39736040-39736122)
chr8 (1-82)||(17954083-17954164)
chr8 (52-85)||(7769658-7769691)
[»] chr6 (16 HSPs)
chr6 (1-85)||(25343201-25343285)
chr6 (1-85)||(4580823-4580907)
chr6 (1-86)||(17581177-17581262)
chr6 (1-86)||(21191372-21191456)
chr6 (1-73)||(25353799-25353871)
chr6 (1-86)||(8651305-8651389)
chr6 (1-85)||(30906082-30906166)
chr6 (1-86)||(21197543-21197627)
chr6 (1-86)||(21771066-21771150)
chr6 (12-83)||(6096887-6096957)
chr6 (1-86)||(21783827-21783911)
chr6 (5-85)||(12802044-12802124)
chr6 (1-84)||(1105887-1105971)
chr6 (1-86)||(13007288-13007373)
chr6 (1-85)||(30392921-30393005)
chr6 (13-85)||(31756725-31756796)
[»] scaffold0208 (2 HSPs)
scaffold0208 (1-85)||(6096-6180)
scaffold0208 (1-78)||(11976-12053)
[»] chr4 (18 HSPs)
chr4 (3-85)||(24287561-24287643)
chr4 (1-90)||(10739838-10739926)
chr4 (1-90)||(10953607-10953695)
chr4 (1-86)||(10733851-10733935)
chr4 (1-86)||(10947620-10947704)
chr4 (1-86)||(26957305-26957389)
chr4 (1-86)||(48166752-48166836)
chr4 (1-85)||(6257706-6257789)
chr4 (2-86)||(17627277-17627361)
chr4 (1-85)||(48160534-48160617)
chr4 (15-85)||(532100-532170)
chr4 (1-86)||(50168168-50168253)
chr4 (1-85)||(26972056-26972139)
chr4 (1-85)||(33461816-33461899)
chr4 (1-85)||(33458691-33458774)
chr4 (2-83)||(19686851-19686936)
chr4 (3-86)||(49976175-49976257)
chr4 (1-36)||(35177413-35177448)
[»] chr7 (18 HSPs)
chr7 (1-78)||(28421460-28421537)
chr7 (1-85)||(5979678-5979762)
chr7 (1-86)||(351361-351445)
chr7 (1-86)||(26383241-26383327)
chr7 (1-86)||(35153030-35153114)
chr7 (1-86)||(3811670-3811756)
chr7 (1-85)||(3817812-3817895)
chr7 (1-88)||(338953-339039)
chr7 (1-86)||(35148510-35148595)
chr7 (19-85)||(18667724-18667790)
chr7 (1-85)||(5849106-5849188)
chr7 (1-85)||(43539567-43539653)
chr7 (1-79)||(22742431-22742508)
chr7 (1-73)||(8824397-8824469)
chr7 (1-79)||(7608022-7608106)
chr7 (3-85)||(38023682-38023764)
chr7 (14-85)||(30219603-30219674)
chr7 (6-36)||(42767656-42767686)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-86)||(13846-13931)
[»] scaffold1114 (1 HSPs)
scaffold1114 (1-85)||(637-721)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-85)||(173391-173475)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-86)||(1100-1184)
[»] scaffold0440 (1 HSPs)
scaffold0440 (1-85)||(1689-1772)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-85)||(5541-5625)
[»] scaffold0449 (1 HSPs)
scaffold0449 (2-86)||(1281-1371)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-85)||(38002-38086)


Alignment Details
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 36864059 - 36864206
Alignment:
Q  85 aaaatatacttgtgatcttaacaaacaatgtagatttcacctaaaccaaatatattttttaacgtcacagtcgatgcaaaatctgtaacaacaaacaaga 184  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36864059 aaaatatactcgagatcttaacaaacaatgtagatttcacctaaaccaaatatattttttaacgtcacagtcgatgcaaaatctgtaacaacaaagaaga 36864158  T
Q  185 aagggaattgttgttacaaatacacctagtgcaaattcacctttctag 232  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  36864159 aagggaattgttgttacagatacacctagtgcaaattcacctttctag 36864206  T

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Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36750072 - 36749988
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36750072 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 36749988  T

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Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13455757 - 13455671
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaa 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  13455757 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattctaacaaa 13455671  T

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Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13461698 - 13461613
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  13461698 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattctaacaa 13461613  T

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Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35085181 - 35085266
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  35085181 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaacattccaacaa 35085266  T

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Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35091154 - 35091238
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  35091154 tgataaatagctaatataattattattacgatatttacccacataatgatattggaatattattaaataataaaacattccaaca 35091238  T

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Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30964985 - 30964901
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  30964985 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 30964901  T

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Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13150191 - 13150274
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||    
T  13150191 tgataaatagctaatataattattgttacgatatttgcccacataatgatattgaaata-taataaataataaaatattccaaca 13150274  T

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Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31002034 - 31001951
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  31002034 tgataaatagctaatataattattgttatgatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 31001951  T

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Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35439872 - 35439956
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  35439872 tgataaataacgaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 35439956  T

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Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 19879250 - 19879170
Alignment:
Q  3 ataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaa 83  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| || ||||| |||||||||||||    
T  19879250 ataaatagctaatatagttattattacgatattttcccacataatgatattggaatataataaaatattaaaatattccaa 19879170  T

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Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23283901 - 23283821
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattcc 81  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||| ||| ||||| || |||||||||||||||||    
T  23283901 tgataaataactaatataattattattacgatatttgtccacataatgatattgaaatataataaaataataaaatattcc 23283821  T

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Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44717307 - 44717390
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| || ||||| ||||||||||||||||    
T  44717307 tgataaatagctaatataattattgttacgatatgtgcccacataatgatattggaata-taataaatcataaaatattccaaca 44717390  T

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Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 11049012 - 11049078
Alignment:
Q  19 attattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  11049012 attattattacgatatttgcccacataataatattggaatataattaaataataaaatattccaaca 11049078  T

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Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23343221 - 23343140
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattcca 82  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||| || |||||| || ||||||||||||||||||    
T  23343221 tgataaatagttaatataattattattatgatatttgtccacataatgatattagaatataataaaataataaaatattcca 23343140  T

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Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28683446 - 28683530
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||   ||| || |||||||||||||||||||||||    
T  28683446 tgataaataactaatataattattgttacgatatttgcccacataatgatattaagata-taataaataataaaatattccaacaa 28683530  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35442334 - 35442393
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatat 60  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  35442334 tgataaatagcgaatataattattgttacgatatttacccacataatgatattggaatat 35442393  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 28765240 - 28765174
Alignment:
Q  19 attattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||| |||||| |||| |||||||| |  |||||| |||||||||| |||||||||||||    
T  28765240 attattattactatatttacccatataatgatatcagaatataattaaataatcaaatattccaaca 28765174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 25233118 - 25233042
Alignment:
Q  2 gataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatat 78  Q
    |||||| || ||||| ||| ||||| | |||||||||| |||||||||  ||| ||||| |||||||||||||||||    
T  25233118 gataaaaagttaataaaataattataaagatatttgccaacataatgaaattgaaatataattaaataataaaatat 25233042  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7771688 - 7771722
Alignment:
Q  1 tgataaatagctaatataattattattacgatatt 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  7771688 tgataaatagctaatataattattgttacgatatt 7771722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32097523 - 32097609
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaa 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32097523 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaacaaa 32097609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12692782 - 12692866
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12692782 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 12692866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 32094723 - 32094808
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32094723 tgataaatagttaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaacaa 32094808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12686680 - 12686757
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatat 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12686680 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatat 12686757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 7390049 - 7390141
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaaatatact 94  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  7390049 tgataaatagctaatataattatcgttacgatattttcccacataatgatattggaata-taataaataataaaatattccaacaaaatatact 7390141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20499796 - 20499712
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||||||    
T  20499796 tgataaatagctaatataattattattacgatatttgtccatataatgatgttgaaatataattaaataataaaatattccaaca 20499712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28525887 - 28525971
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||    
T  28525887 tgataaatagctaatataattattgttacgatattttcccacataatgatattggaata-taataaataataaaatattccaacaa 28525971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41296937 - 41296853
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||| |||||||||||||||||    
T  41296937 tgataaatagctaatataattattattacgatatttgcccacataatgatattgtaatataataaaat-ataaaatattccaacaa 41296853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28531983 - 28532066
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||    
T  28531983 tgataaatagctaatataattattgttacgatattttcccacataatgatattggaata-taataaataataaaatattccaaca 28532066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30384885 - 30384969
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||| || |||||||||||||||||||||    
T  30384885 tgataaatagctaatataattattattacaatatttgtccacataatgatatcggaatataataaaataataaaatattccaaca 30384969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14609789 - 14609706
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  14609789 tgataagtaactaatataattattattacgatatttgcacacataatgatattggaatat--ttaaataataaaatattccaacaa 14609706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33753732 - 33753815
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaac 84  Q
    ||||||||||||||||||||||| || |  |||||| ||||||||||||| ||| ||||| |||||||||||||||| ||||||    
T  33753732 tgataaatagctaatataattatgataataatatttacccacataatgatattgaaatataattaaataataaaataatccaac 33753815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 30771933 - 30771855
Alignment:
Q  9 agctaatataattattattacgatatttgcccacataatgatcttggaatattattaaa-taataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||  | |||  ||||||||||||||||||    
T  30771933 agctaatataattattattacgatatttgcccacataatgatattgaaatatagtaaaacaaataaaatattccaacaa 30771855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26509515 - 26509431
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||| ||||||||||||||  | ||||||||||||| ||||||   |||||||| || ||||||||||||||||||||||    
T  26509515 tgataaatagttaatataattattacaa-gatatttgcccacttaatgacaatggaatataataaaataataaaatattccaacaa 26509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 25408476 - 25408539
Alignment:
Q  14 atataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaata 77  Q
    ||||||||| | |||||||||||| |||||||||||| | | ||||||||||||||||||||||    
T  25408476 atataattacttttacgatatttgtccacataatgatatcgaaatattattaaataataaaata 25408539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 19060279 - 19060360
Alignment:
Q  5 aaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||||||||||||||||   |||||||||||||||||||   ||| ||||  |||||||| ||||||||| ||||||    
T  19060279 aaatagctaatataattattatggagatatttgcccacataatgtcattgaaatagaattaaatattaaaatatttcaacaa 19060360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 19066620 - 19066693
Alignment:
Q  12 taatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||   ||||||||||||||||||  | | ||||||| |||||||| |||||||||||||||    
T  19066620 taatataattattatggagatatttgcccacataatattatgggaatataattaaatattaaaatattccaaca 19066693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 33849365 - 33849446
Alignment:
Q  3 ataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaac 84  Q
    ||||||||||||||||||||| || |  |||||| |||| ||| |||| ||| ||||| |||||||||||||||| ||||||    
T  33849365 ataaatagctaatataattatgataaaaatatttacccatatagtgatattgaaatataattaaataataaaataatccaac 33849446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 8706888 - 8706916
Alignment:
Q  1 tgataaatagctaatataattattattac 29  Q
    |||||||||||||||||||||||||||||    
T  8706888 tgataaatagctaatataattattattac 8706916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10238714 - 10238799
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10238714 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaacaa 10238799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11840227 - 11840312
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11840227 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaacaa 11840312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42191722 - 42191807
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  42191722 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattctaacaa 42191807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10244836 - 10244920
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  10244836 tgataaatagctaatataattattattacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaaca 10244920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 17056293 - 17056377
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17056293 tgataaatagataatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 17056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 42197664 - 42197748
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42197664 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattctaaca 42197748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 55003903 - 55003990
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaaa 88  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55003903 tgataaataactaatataattattattacgatatttgtccacataatgatattggaatattattaaataataaaatattccaacaaaa 55003990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26429919 - 26430003
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  26429919 tgataaatagctaatataattattattacgatatttgcccacataatgatattagaatattattaaataataaaacattccaaca 26430003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11846479 - 11846562
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  11846479 tgataaataactaatataattattattacgatatttgcccacataatgat-atggaatattattaaataataaaatattccaaca 11846562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9586514 - 9586598
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||    
T  9586514 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatataataaaat-ataaaatattccaacaa 9586598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10761152 - 10761236
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  10761152 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 10761236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10769471 - 10769554
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  10769471 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 10769554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23138918 - 23139001
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  23138918 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 23139001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30051602 - 30051685
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  30051602 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 30051685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38456052 - 38456135
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  38456052 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 38456135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38449565 - 38449649
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||| |||||||||||||||    
T  38449565 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataaaaaaatattccaacaa 38449649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49151270 - 49151186
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||    
T  49151270 tgataaatagctaatataattattgttacgatattttcccacataatgatattggaata-taataaataataaaatattccaacaa 49151186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49157337 - 49157253
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||    
T  49157337 tgataaatagctaatataattattgttacgatattttcccacataatgatattggaata-taataaataataaaatattccaacaa 49157253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8331445 - 8331362
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| || ||||||||||||||||||||||    
T  8331445 tgataaatagctaatataattattgttacgatatttgtccacataatgatattggaata-taataaataataaaatattccaaca 8331362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24643992 - 24644077
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| ||||| |||||||| ||| |||||||||||||||||| || ||||||||| || ||||||||||||||||||||||    
T  24643992 tgataaataactaatgtaattattgttaggatatttgcccacataataatattggaatataataaaataataaaatattccaacaa 24644077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 17602035 - 17602120
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| ||||||||||||||| || ||||||| | |||||| |||| || ||||||||||||||||||||||||| ||||||    
T  17602035 tgataaataactaatataattattactatgatatttacgcacatagtgatatttgaatattattaaataataaaatatttcaacaa 17602120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 28964536 - 28964479
Alignment:
Q  3 ataaatagctaatataattattattacgatatttgcccacataatgatcttggaatat 60  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  28964536 ataaatagctaatataattattgttacgatatttgcccacataatgatattggaatat 28964479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 8474648 - 8474721
Alignment:
Q  12 taatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||||||  ||||||||||| | | ||||| ||||||||||||||||||| ||||    
T  8474648 taatataattattattacgatatttgttcacataatgatatcgaaatataattaaataataaaatattcaaaca 8474721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2982728 - 2982812
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||| | |||||||||||||||| |||||||  | ||||||||| | | ||||| ||||||||||||||||| ||||||    
T  2982728 tgataaatagattatataattattattacaatatttgttcgcataatgatatcgaaatataattaaataataaaatataccaaca 2982812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34300096 - 34300012
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||| ||||||||||||||||| ||| ||||||||| ||||||| | | || || || ||||||||||||||| |||||    
T  34300096 tgataaatagttaatataattattattatgatgtttgcccacgtaatgatatcgaaaaataataaaataataaaatatttcaaca 34300012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12109168 - 12109246
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatatt 79  Q
    ||||||||| |||||| ||||||||||||||||||| | |||||||| || ||  ||||| || |||||||||||||||    
T  12109168 tgataaataactaatacaattattattacgatatttactcacataataatattataatataataaaataataaaatatt 12109246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 46656338 - 46656306
Alignment:
Q  12 taatataattattattacgatatttgcccacat 44  Q
    |||||||||||||||||||||||||||||||||    
T  46656338 taatataattattattacgatatttgcccacat 46656306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52063348 - 52063392
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataa 46  Q
    ||||||||||||||| |||||||| | |||||||||||||||||||    
T  52063348 tgataaatagctaatttaattatt-tgacgatatttgcccacataa 52063392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 53071753 - 53071793
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgccca 41  Q
    ||||||||| |||||||||||||| ||| ||||||||||||    
T  53071753 tgataaataactaatataattattgttatgatatttgccca 53071793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 8e-39; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25382037 - 25382122
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25382037 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaacaa 25382122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1077902 - 1077818
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1077902 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 1077818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 50305855 - 50305771
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50305855 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 50305771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12184098 - 12184183
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  12184098 tgataaataactaatataattattattacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaacaa 12184183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25275548 - 25275625
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatat 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25275548 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatat 25275625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25388004 - 25388088
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  25388004 tgataaataaataatataattattattacgatatttgcccacataatgatattggaatattattaattaataaaatattccaaca 25388088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31057702 - 31057618
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  31057702 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 31057618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31051202 - 31051119
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  31051202 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 31051119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 34739642 - 34739559
Alignment:
Q  3 ataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaa 87  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  34739642 ataaatagctaatataattattgttacgatattttcccacataatgatattggaata-taataaataataaaatattccaacaaa 34739559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44409658 - 44409590
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaata 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  44409658 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatataataaaata 44409590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24927270 - 24927355
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||   ||||||||| |||||||| ||||||||||||||||    
T  24927270 tgataaatagctaatataattattatagagatatttgcccacataatgtcattggaatataattaaatattaaaatattccaacaa 24927355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8093347 - 8093431
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||||||||||| |||||  ||||||||  |||||||| ||||||||| ||||||||||||||||||||||||    
T  8093347 tgataaataactaatataattattgttacggcatttgcccggataatgatattggaatataattaaataataaaatattccaaca 8093431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27954819 - 27954735
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||||||||| ||||||||| ||||||||| ||||||| |  |||||| |||||||||||||||||| |||||    
T  27954819 tgataaataactaatataattagtattacgatttttgcccacgtaatgatatcagaatataattaaataataaaatatttcaaca 27954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33458411 - 33458493
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| | ||||||| ||||||   |||||||| ||||||| |||| |  |||||| |||||||||||||||||||||||||    
T  33458411 tgataaataaccaatataactattat---gatatttgtccacatactgatatcagaatataattaaataataaaatattccaacaa 33458493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 24964206 - 24964289
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatc-ttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||||||   ||||||| |||||||||| ||| ||||||||| ||| |||| ||||| |||||||||    
T  24964206 tgataaatagctaatataattattatagagatatttacccacataat-atcattggaatataatt-aatattaaaacattccaaca 24964289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36818630 - 36818546
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36818630 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 36818546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32890546 - 32890461
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  32890546 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaacattccaacaa 32890461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32896670 - 32896585
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  32896670 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaacattccaacaa 32896585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 42993501 - 42993585
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||    
T  42993501 tgataaataactaatataattattattacgatatttgcccatataatgatattggaatattattaaataataaaacattccaaca 42993585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1883339 - 1883424
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  | ||||||||| |||||||||||||||||||||||||    
T  1883339 tgataaatagctaatataattattattacgatatttgcccgcataatattattggaatataattaaataataaaatattccaacaa 1883424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5542663 - 5542747
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  5542663 tgataaataactaatataattattattacgatatttgcccacataatgat-atagaatattattaaataataaaatattccaacaa 5542747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39727786 - 39727870
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  39727786 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 39727870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9934941 - 9934857
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||| || ||| ||||||||||||||||||||||||||||||    
T  9934941 tgataaataactaatataattattattacaatatttacccacataatcatattgaaatattattaaataataaaatattccaaca 9934857  T

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Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14417619 - 14417535
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||| || |||||||||||||||||||||||    
T  14417619 tgataaataactaatataattattattacgatattttcccacataatgatattggtata-taataaataataaaatattccaacaa 14417535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22220229 - 22220312
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||  | |||||||||||||||||||    
T  22220229 tgataaatagctaatataactattgttacgatatttgcccacataatgatattggaatataat--agtaataaaatattccaacaa 22220312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42033455 - 42033372
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||| |||| || ||||||||||||||||||||||    
T  42033455 tgataaatagctaatataattattgttacgatatttacccgcataatgatattgaaata-taataaataataaaatattccaaca 42033372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10705496 - 10705412
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||| || ||||||| ||| |||||||||||    
T  10705496 tgataaatagctaatataattattgttacgatattcgcccacaaaatgatattggaata-taataaataacaaactattccaacaa 10705412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10699687 - 10699604
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||  ||||||||||    
T  10699687 tgataaataactagtataattattgttacgatatttgcccacataatgatattggaata-taataaataataagctattccaaca 10699604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39736040 - 39736122
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||  ||||||| || ||||||||||||||||||||||    
T  39736040 tgataaatagctaatataattattgttacgatatttgtccacataataat-atggaata-taataaataataaaatattccaaca 39736122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17954164 - 17954083
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattcca 82  Q
    |||||||||||||||||||||||||| | ||||||| |||||| |||||  ||| ||||| |||||| ||||||| ||||||    
T  17954164 tgataaatagctaatataattattataaagatattttcccacaaaatgacattgaaatataattaaaaaataaaacattcca 17954083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 7769691 - 7769658
Alignment:
Q  52 ttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||||||||||||||    
T  7769691 ttggaatattattaaataataaaatattccaaca 7769658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25343285 - 25343201
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25343285 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 25343201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4580823 - 4580907
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  4580823 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaattaataaaatattccaaca 4580907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 17581262 - 17581177
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  17581262 tgataaatagttaatataattattattacgatatttgcccacataatgatattggaatataattaaataataaaatattccaacaa 17581177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21191372 - 21191456
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  21191372 tgataaataactaatataattattattacgatatttgcccacataatgat-atggaatattattaaataataaaatattccaacaa 21191456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25353871 - 25353799
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataa 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25353871 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataa 25353799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8651305 - 8651389
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  8651305 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 8651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30906082 - 30906166
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||||||    
T  30906082 tgataaataactaatataattattattacgatatttgcccacataatgatattgaaatataataaaataataaaatattccaaca 30906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21197543 - 21197627
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| |||||||||||||||    
T  21197543 tgataaataactaatataattattattacgatatttacccacataatgat-atggaatattattaaataaaaaaatattccaacaa 21197627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21771066 - 21771150
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| || |||||||||||||||||||||||    
T  21771066 tgataaatagctaatataattattgttacgatatttgtccacataatgatattggaata-taataaataataaaatattccaacaa 21771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 6096957 - 6096887
Alignment:
Q  12 taatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaa 83  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  6096957 taatataattattgttactatatttgcccacataatgatattggaata-taataaataataaaatattccaa 6096887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21783827 - 21783911
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| || || ||||| || |||||||| |||||||| |||||    
T  21783827 tgataaatagttaatataattattattacgatatttacccacataataatattagaata-taataaataattaaatattctaacaa 21783911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 12802044 - 12802124
Alignment:
Q  5 aaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||   ||||||||||||| |||||   ||||||||| |||||||| |||||||||||||||    
T  12802044 aaatagctaatataattattatagagatatttgcccacgtaatgtcattggaatataattaaatattaaaatattccaaca 12802124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1105971 - 1105887
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataa-tgatcttggaatattattaaataataaaatattccaac 84  Q
    ||||||||| | ||||||||||||| ||| |||||||||||||||| ||||||   ||||| ||||||| |||||||||| ||||    
T  1105971 tgataaatatcaaatataattattactaccatatttgcccacataattgatctcataatataattaaattataaaatatttcaac 1105887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13007373 - 13007288
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| |||||||||||||||| | | | |||| | |||||||||  ||||||||| ||||||||| ||||| ||| |||||    
T  13007373 tgataaataactaatataattattataaagttttttgtctacataatgacattggaatataattaaataaaaaaatgttctaacaa 13007288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 30393005 - 30392921
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||| |||||||||||| |  |  |||||| | ||||||||||  ||| ||||| ||||||||| ||||||||||||||    
T  30393005 tgataaatagttaatataattatgagaaatatattttctcacataatgacattgaaatataattaaataacaaaatattccaaca 30392921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 31756725 - 31756796
Alignment:
Q  13 aatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||| |||| ||||||  ||||||||| || ||| |||| || ||||||||||||||||| ||||    
T  31756725 aatataattattgttacaatatttatccacataataatattgaaata-taataaataataaaatattcgaaca 31756796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6180 - 6096
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6180 tgataaataactaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatattccaaca 6096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12053 - 11976
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatat 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12053 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatat 11976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 24287643 - 24287561
Alignment:
Q  3 ataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  24287643 ataaatagctaatataattattattacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaaca 24287561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10739838 - 10739926
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaaata 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||    
T  10739838 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatataataaaat-ataaaatattccaacaaaata 10739926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10953607 - 10953695
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaaata 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||    
T  10953607 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatataataaaat-ataaaatattccaacaaaata 10953695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10733851 - 10733935
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||    
T  10733851 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatataataaaat-ataaaatattccaacaa 10733935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10947620 - 10947704
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||    
T  10947620 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatataataaaat-ataaaatattccaacaa 10947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 26957305 - 26957389
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  26957305 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 26957389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 48166836 - 48166752
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  48166836 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 48166752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 6257706 - 6257789
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||    
T  6257706 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatataataaaat-ataaaatattccaaca 6257789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 17627277 - 17627361
Alignment:
Q  2 gataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||||||||||||||||||||||| ||||||    
T  17627277 gataaatagctaatataattattattacgatattttcccacataatgatatcgaaatattattaaataataaaatatttcaacaa 17627361  T

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Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 48160617 - 48160534
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  48160617 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 48160534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 532100 - 532170
Alignment:
Q  15 tataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  532100 tataattattattacgatatttgcctacataatgatattggaatattattaaataataaaatattccaaca 532170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50168253 - 50168168
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||| || || ||||| | ||||||||| |||||||||||||||||||||||||    
T  50168253 tgataaatagctaatataattattattacgatattttccgacgtaatgttattggaatataattaaataataaaatattccaacaa 50168168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26972056 - 26972139
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  26972056 tgataaatagctaatataattattgttacaatatttgcccacataatgatattggaata-taataaataataaaatattccaaca 26972139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33461816 - 33461899
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||| || ||||||||||||||||||||||    
T  33461816 tgataaatagctaatataattattgttacgataattgcccacataaagatattggaata-taataaataataaaatattccaaca 33461899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33458691 - 33458774
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||| ||| |||||||| || ||||||||||||||||||||||    
T  33458691 tgataaatagttaatataattattgttacgataattgcccacataaggatattggaata-taataaataataaaatattccaaca 33458774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 19686851 - 19686936
Alignment:
Q  2 gataaatagctaat---ataattattattacgatatttgcccac-ataatgatcttggaatattattaaataataaaatattccaa 83  Q
    ||||||||||||||   ||||||||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||| |||||    
T  19686851 gataaatagctaattatataattattattacgatatttgcccacaataatgatatcgaaatataattaaataataaaatactccaa 19686936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 49976257 - 49976175
Alignment:
Q  3 ataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||||||||||||||||||   |||||| ||||||||||||   ||| ||||| |||||||| |||||||||| |||||    
T  49976257 ataaatagctaatataattattatagagatatt-gcccacataatgtcattgaaatataattaaatattaaaatattcaaacaa 49976175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 35177448 - 35177413
Alignment:
Q  1 tgataaatagctaatataattattattacgatattt 36  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35177448 tgataaatatctaatataattattattacgatattt 35177413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28421460 - 28421537
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatat 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28421460 tgataaatagctaatataattattattacgatatttgcccacataatgatattggaatattattaaataataaaatat 28421537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 5979678 - 5979762
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  5979678 tgataaataactaatataattattattacgatatttgcccacataatgatattgaaatattattaaataataaaatattccaaca 5979762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 351445 - 351361
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  351445 tgataaatagctaatataattattgttacgatatttgcccacataatgatattggaata-taataaataataaaatattccaacaa 351361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 26383327 - 26383241
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattatt-aaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||| ||| ||||||||||||||||||||||    
T  26383327 tgataaatagctaatataattattattatgatatttgcccacaaaatgatattgaaatataattaaaataataaaatattccaacaa 26383241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35153030 - 35153114
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||| || |||||||||||||||||||||||    
T  35153030 tgataaatatctaatataattattgttacgatatttgcccacataatgacattggaata-taataaataataaaatattccaacaa 35153114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3811670 - 3811756
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatg--atcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  || |||||||| || |||||||||||||||||||||||    
T  3811670 tgataaatagctaatataattattgttacgatatttgcccacataatgatatattggaata-taataaataataaaatattccaacaa 3811756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3817812 - 3817895
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||||||||    
T  3817812 tgataaatagctaatataattattgttacgatatttgcctacataatgatattgaaata-taataaataataaaatattccaaca 3817895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 339039 - 338953
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaaaa 88  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||||||    
T  339039 tgataaatagctaatataattattgttatgatatttgcccacataatgatattgaaata-taagaaataataaaatattccaacaaaa 338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35148510 - 35148595
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttg-cccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||| || ||||| || |||||||||||||||||||||||    
T  35148510 tgataaatagctaatataattattgttacgatatttgccccacataatgatattagaata-taataaataataaaatattccaacaa 35148595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 18667724 - 18667790
Alignment:
Q  19 attattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||    
T  18667724 attattattacgatatttgcacacacaatgatattggaatataattaaataataaaatattccaaca 18667790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5849188 - 5849106
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||||| || |||||| ||  ||||||||||||||||||||    
T  5849188 tgataaataactaatataattattgttacgatatttacccacataatgatattagaatataat--aataataaaatattccaaca 5849106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 43539653 - 43539567
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatat--tattaaataataaaatattccaaca 85  Q
    |||||||||  ||||||||||||| ||||||||||||| ||||||||||| |||||||||   |||||||||||||| |||||||||    
T  43539653 tgataaataattaatataattatttttacgatatttgcacacataatgatattggaatataaaattaaataataaaacattccaaca 43539567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22742431 - 22742508
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatatt 79  Q
    ||||||||| |||||||||||||| ||||| |||||||| ||||||| || |||||||| || ||||||||||||||||    
T  22742431 tgataaataactaatataattattgttacggtatttgcctacataataatattggaata-taataaataataaaatatt 22742508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8824469 - 8824397
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataa 73  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||  ||  ||||| ||||||||||||    
T  8824469 tgataaatagctaatataattattataaagatatttgcctacataatgacattaaaatataattaaataataa 8824397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7608106 - 7608022
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgccca------cataatgatcttggaatattattaaataataaaatatt 79  Q
    ||||||||| || ||||||||||||||| ||||||||||||       |||||||| ||||||||| ||||||||||||||||||    
T  7608106 tgataaataactgatataattattattatgatatttgcccatataataataatgatattggaatataattaaataataaaatatt 7608022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 38023764 - 38023682
Alignment:
Q  3 ataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||| |||||||||| ||||| | ||||||||  |||||||| || ||| ||||| | |||||||||||||||| |||||    
T  38023764 ataaataactaatataataattataaagatatttgttcacataataatattgaaatataaataaataataaaatatttcaaca 38023682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 30219603 - 30219674
Alignment:
Q  14 atataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||| || || || |||| || ||  ||||| || |||||||||||||||||||||    
T  30219603 atataattattattacgatacttaccgacgtaataatattcaaatataataaaataataaaatattccaaca 30219674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 42767656 - 42767686
Alignment:
Q  6 aatagctaatataattattattacgatattt 36  Q
    |||||||||||||||||||||||||||||||    
T  42767656 aatagctaatataattattattacgatattt 42767686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13931 - 13846
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  13931 tgataaatagctaatataattattattactatattttcccacataatgatattggaatataattaaataataaaatattccaacaa 13846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 721 - 637
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  721 tgataaataactaatataattattattatgatattttcccacataatgatattggaatataattaaataataaaatattccaaca 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 173391 - 173475
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| || |||||||||||||||||||||    
T  173391 tgataaatcgctaatataattattattacgatatttgcccacataataatattggaatataataaaataataaaatattccaaca 173475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1100 - 1184
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaacaa 86  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||| || |||||||||||||||||||||||    
T  1100 tgataaataactaatataattattattacgatattttcccacataatgatattggtata-taataaataataaaatattccaacaa 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1689 - 1772
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| || ||| |||| || |||||||||||||||| |||||    
T  1689 tgataaatagctaatataattattgttacgatatttacccacataataatattgaaata-taataaataataaaatatttcaaca 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5625 - 5541
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| ||||||||||||||||  ||||||||||| ||| |||||| | ||||||| |||||||||| |||||||||||||    
T  5625 tgataaataactaatataattattatagcgatatttgcctacaaaatgatttcggaatataattaaataattaaatattccaaca 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 1281 - 1371
Alignment:
Q  2 gataaatagctaatataattattattacgatatttgcccacataatgatcttgg------aatattattaaataataaaatattccaacaa 86  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| |  |      ||||||||||||||||||||| |||||||||    
T  1281 gataaatagctaatataattattattacgatatttgtccatataatgatatcagaatcataatattattaaataataaaattttccaacaa 1371  T

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Target: scaffold0085 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38086 - 38002
Alignment:
Q  1 tgataaatagctaatataattattattacgatatttgcccacataatgatcttggaatattattaaataataaaatattccaaca 85  Q
    ||||||||| |||||| ||||||||||| ||| || || ||||||||||  |||||||||  ||||||||||||||||| |||||    
T  38086 tgataaataactaataaaattattattatgattttcgctcacataatgacattggaatatgtttaaataataaaatatttcaaca 38002  T

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