View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14464_low_17 (Length: 382)

Name: NF14464_low_17
Description: NF14464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14464_low_17
NF14464_low_17
[»] chr5 (37 HSPs)
chr5 (72-367)||(26686449-26686747)
chr5 (72-367)||(26956180-26956478)
chr5 (26-116)||(34032141-34032231)
chr5 (34-149)||(14309105-14309220)
chr5 (56-152)||(4695067-4695163)
chr5 (29-148)||(10410418-10410538)
chr5 (60-148)||(26432261-26432349)
chr5 (61-153)||(38594945-38595037)
chr5 (30-149)||(39177651-39177769)
chr5 (22-140)||(8415651-8415769)
chr5 (30-140)||(10228289-10228397)
chr5 (29-151)||(28639518-28639643)
chr5 (61-153)||(17774296-17774388)
chr5 (59-120)||(41568714-41568775)
chr5 (56-148)||(29829585-29829677)
chr5 (31-134)||(779056-779158)
chr5 (57-147)||(12221433-12221523)
chr5 (30-132)||(17098221-17098323)
chr5 (26-151)||(2918613-2918738)
chr5 (25-74)||(23023597-23023646)
chr5 (28-97)||(25437945-25438014)
chr5 (30-135)||(30501172-30501277)
chr5 (30-135)||(30541515-30541620)
chr5 (27-148)||(41583509-41583630)
chr5 (25-149)||(30104768-30104892)
chr5 (53-148)||(5758554-5758649)
chr5 (61-148)||(36609150-36609237)
chr5 (31-69)||(112584-112622)
chr5 (37-146)||(28207725-28207834)
chr5 (32-69)||(9330409-9330446)
chr5 (72-153)||(21259432-21259513)
chr5 (72-153)||(22601786-22601867)
chr5 (57-149)||(25767542-25767635)
chr5 (56-97)||(31914165-31914206)
chr5 (26-66)||(248563-248603)
chr5 (27-83)||(2977738-2977794)
chr5 (29-69)||(31672379-31672419)
[»] chr4 (51 HSPs)
chr4 (1-148)||(40252602-40252742)
chr4 (34-148)||(53261531-53261645)
chr4 (59-148)||(36876076-36876165)
chr4 (29-149)||(49795113-49795232)
chr4 (26-152)||(52650705-52650831)
chr4 (35-136)||(49951721-49951822)
chr4 (61-148)||(3179025-3179113)
chr4 (29-153)||(47937832-47937955)
chr4 (37-120)||(22889236-22889319)
chr4 (37-120)||(22940900-22940983)
chr4 (32-149)||(23136525-23136642)
chr4 (17-149)||(8297827-8297959)
chr4 (32-147)||(27748412-27748526)
chr4 (54-149)||(37461491-37461585)
chr4 (22-148)||(41370187-41370313)
chr4 (90-148)||(44570123-44570181)
chr4 (72-146)||(45743326-45743400)
chr4 (55-148)||(31262910-31263002)
chr4 (28-148)||(23016241-23016361)
chr4 (60-148)||(25042753-25042837)
chr4 (32-134)||(48097923-48098025)
chr4 (32-148)||(21687604-21687720)
chr4 (30-83)||(24175482-24175535)
chr4 (72-140)||(41394009-41394078)
chr4 (72-147)||(38354501-38354577)
chr4 (105-152)||(20022234-20022281)
chr4 (66-149)||(39767212-39767295)
chr4 (30-97)||(42370383-42370450)
chr4 (61-153)||(4391968-4392061)
chr4 (52-132)||(17970801-17970882)
chr4 (72-148)||(35153262-35153339)
chr4 (76-148)||(38682008-38682081)
chr4 (18-148)||(2063433-2063562)
chr4 (56-120)||(40173525-40173589)
chr4 (17-69)||(41462005-41462057)
chr4 (25-85)||(54700924-54700984)
chr4 (94-153)||(7996746-7996800)
chr4 (68-159)||(18939876-18939967)
chr4 (29-80)||(30978735-30978786)
chr4 (30-85)||(32175402-32175457)
chr4 (57-148)||(50617492-50617583)
chr4 (55-118)||(53622297-53622360)
chr4 (87-148)||(10505950-10506012)
chr4 (77-147)||(28116653-28116723)
chr4 (56-148)||(49622964-49623057)
chr4 (25-125)||(20394602-20394702)
chr4 (26-66)||(37138263-37138302)
chr4 (29-77)||(45900239-45900287)
chr4 (26-66)||(46521469-46521509)
chr4 (59-146)||(46570545-46570633)
chr4 (27-147)||(51291052-51291172)
[»] chr1 (53 HSPs)
chr1 (21-148)||(48947164-48947291)
chr1 (27-152)||(3047833-3047958)
chr1 (25-149)||(16113883-16114007)
chr1 (32-153)||(39973863-39973984)
chr1 (19-148)||(40053251-40053380)
chr1 (29-150)||(31042969-31043090)
chr1 (28-147)||(34861232-34861351)
chr1 (21-140)||(35543430-35543549)
chr1 (32-148)||(33791758-33791874)
chr1 (32-134)||(35259079-35259181)
chr1 (20-148)||(48905-49033)
chr1 (28-146)||(31807800-31807919)
chr1 (52-148)||(42573788-42573884)
chr1 (57-152)||(27934743-27934839)
chr1 (34-153)||(4040866-4040985)
chr1 (27-132)||(4521043-4521146)
chr1 (29-139)||(49478780-49478891)
chr1 (72-151)||(51904585-51904664)
chr1 (94-152)||(9931808-9931866)
chr1 (57-147)||(26700245-26700335)
chr1 (31-152)||(32572766-32572887)
chr1 (71-139)||(290601-290669)
chr1 (56-152)||(10355042-10355138)
chr1 (59-147)||(24034055-24034143)
chr1 (56-148)||(40286853-40286945)
chr1 (56-145)||(46804846-46804935)
chr1 (29-85)||(39150550-39150606)
chr1 (53-132)||(36321660-36321739)
chr1 (39-134)||(37037625-37037720)
chr1 (27-97)||(39912280-39912350)
chr1 (106-147)||(30548318-30548359)
chr1 (72-148)||(32787274-32787351)
chr1 (61-152)||(759241-759333)
chr1 (112-152)||(4540764-4540804)
chr1 (26-66)||(7549808-7549848)
chr1 (81-153)||(38172665-38172737)
chr1 (29-140)||(45925460-45925572)
chr1 (56-147)||(290869-290960)
chr1 (95-146)||(30350938-30350989)
chr1 (35-66)||(36321596-36321627)
chr1 (18-132)||(40570646-40570761)
chr1 (72-153)||(1656447-1656529)
chr1 (28-130)||(2632998-2633100)
chr1 (27-65)||(14758525-14758563)
chr1 (21-74)||(3506940-3506993)
chr1 (108-153)||(18038940-18038985)
chr1 (29-66)||(29204072-29204109)
chr1 (25-66)||(40377006-40377047)
chr1 (28-132)||(33744170-33744274)
chr1 (93-153)||(45753482-45753542)
chr1 (34-134)||(47031457-47031557)
chr1 (92-148)||(48454602-48454658)
chr1 (90-142)||(52692521-52692573)
[»] chr8 (45 HSPs)
chr8 (24-152)||(1876497-1876625)
chr8 (31-148)||(12002237-12002354)
chr8 (25-152)||(11533196-11533323)
chr8 (61-148)||(32271170-32271257)
chr8 (56-161)||(7627853-7627958)
chr8 (27-152)||(14016882-14017007)
chr8 (31-147)||(18842275-18842391)
chr8 (72-152)||(40628982-40629062)
chr8 (34-153)||(39594503-39594621)
chr8 (32-148)||(44220729-44220843)
chr8 (26-149)||(24869379-24869498)
chr8 (30-153)||(38047623-38047746)
chr8 (30-148)||(31844236-31844354)
chr8 (29-153)||(41959995-41960117)
chr8 (24-125)||(20279597-20279698)
chr8 (60-149)||(20522943-20523032)
chr8 (24-125)||(21066224-21066325)
chr8 (25-147)||(38019439-38019556)
chr8 (28-148)||(31264964-31265084)
chr8 (72-152)||(43841043-43841123)
chr8 (57-152)||(30158077-30158172)
chr8 (29-152)||(39691129-39691252)
chr8 (31-147)||(37564352-37564468)
chr8 (57-148)||(2376747-2376838)
chr8 (29-132)||(36348524-36348627)
chr8 (72-147)||(37449551-37449626)
chr8 (27-85)||(5687256-5687314)
chr8 (102-148)||(36907841-36907887)
chr8 (32-140)||(1445160-1445268)
chr8 (77-142)||(4278957-4279021)
chr8 (56-148)||(35501086-35501179)
chr8 (26-71)||(39093049-39093094)
chr8 (25-66)||(44254228-44254269)
chr8 (61-148)||(44907218-44907306)
chr8 (32-134)||(7528260-7528360)
chr8 (26-149)||(30486574-30486697)
chr8 (31-132)||(7513330-7513431)
chr8 (27-120)||(12782743-12782836)
chr8 (32-69)||(39644232-39644269)
chr8 (28-97)||(42636436-42636505)
chr8 (61-148)||(9629838-9629925)
chr8 (26-66)||(20142540-20142580)
chr8 (28-140)||(34336500-34336611)
chr8 (29-65)||(37231440-37231476)
chr8 (29-69)||(37426387-37426427)
[»] chr6 (15 HSPs)
chr6 (27-152)||(13445746-13445871)
chr6 (31-149)||(5704577-5704693)
chr6 (56-147)||(29716784-29716876)
chr6 (72-148)||(10364754-10364830)
chr6 (58-148)||(23344568-23344659)
chr6 (33-147)||(3753114-3753229)
chr6 (33-147)||(3769337-3769452)
chr6 (27-78)||(6586506-6586556)
chr6 (90-149)||(34552341-34552400)
chr6 (18-85)||(5446744-5446811)
chr6 (28-103)||(19293517-19293592)
chr6 (28-115)||(27752613-27752700)
chr6 (29-132)||(30509284-30509387)
chr6 (34-85)||(30739572-30739623)
chr6 (72-148)||(10429739-10429814)
[»] chr2 (47 HSPs)
chr2 (25-145)||(24389645-24389765)
chr2 (31-148)||(12848491-12848607)
chr2 (26-134)||(2825989-2826097)
chr2 (34-153)||(6334686-6334805)
chr2 (60-147)||(25626947-25627034)
chr2 (57-148)||(33454964-33455055)
chr2 (27-148)||(565711-565833)
chr2 (55-146)||(8964386-8964477)
chr2 (19-148)||(431652-431782)
chr2 (55-153)||(6083916-6084014)
chr2 (27-136)||(30869593-30869700)
chr2 (72-153)||(3666452-3666533)
chr2 (71-148)||(33068562-33068639)
chr2 (28-143)||(3882583-3882698)
chr2 (57-142)||(12762896-12762981)
chr2 (61-153)||(9049164-9049256)
chr2 (26-149)||(4654979-4655100)
chr2 (72-148)||(30523014-30523090)
chr2 (29-120)||(30822767-30822857)
chr2 (30-149)||(37284904-37285023)
chr2 (55-153)||(6411388-6411486)
chr2 (58-161)||(2796532-2796627)
chr2 (29-148)||(13538363-13538483)
chr2 (27-83)||(15816788-15816844)
chr2 (30-78)||(36480369-36480417)
chr2 (23-149)||(37313687-37313811)
chr2 (56-151)||(39647789-39647884)
chr2 (102-148)||(15806059-15806105)
chr2 (9-134)||(31513701-31513825)
chr2 (27-109)||(40874781-40874863)
chr2 (71-149)||(44838626-44838704)
chr2 (52-132)||(3074071-3074152)
chr2 (28-149)||(32859752-32859873)
chr2 (31-120)||(33634845-33634934)
chr2 (56-152)||(33275909-33276004)
chr2 (93-153)||(43678565-43678625)
chr2 (56-197)||(11385447-11385590)
chr2 (27-66)||(43745590-43745629)
chr2 (27-97)||(1334954-1335024)
chr2 (28-130)||(18223081-18223183)
chr2 (31-153)||(29685718-29685840)
chr2 (30-104)||(45076191-45076264)
chr2 (31-148)||(11944892-11945009)
chr2 (75-148)||(42342509-42342581)
chr2 (26-66)||(5403503-5403543)
chr2 (28-153)||(18684327-18684454)
chr2 (95-159)||(32066756-32066820)
[»] chr3 (38 HSPs)
chr3 (26-149)||(45757894-45758017)
chr3 (18-148)||(54911158-54911288)
chr3 (25-148)||(3027003-3027127)
chr3 (28-146)||(29611987-29612106)
chr3 (32-153)||(24313522-24313644)
chr3 (25-148)||(48551004-48551127)
chr3 (27-148)||(25317771-25317892)
chr3 (35-140)||(28691951-28692056)
chr3 (26-136)||(46725622-46725733)
chr3 (26-132)||(48322241-48322346)
chr3 (26-148)||(53040434-53040556)
chr3 (61-148)||(20821303-20821391)
chr3 (72-148)||(37388418-37388494)
chr3 (61-148)||(45584347-45584432)
chr3 (61-140)||(12140145-12140224)
chr3 (26-148)||(54290796-54290918)
chr3 (29-149)||(11623490-11623611)
chr3 (71-148)||(14146110-14146187)
chr3 (24-132)||(37708400-37708508)
chr3 (57-147)||(9342672-9342763)
chr3 (97-152)||(33072126-33072181)
chr3 (62-140)||(37359467-37359546)
chr3 (27-141)||(40614291-40614411)
chr3 (31-77)||(4305232-4305278)
chr3 (84-153)||(45557094-45557162)
chr3 (30-95)||(50604022-50604087)
chr3 (56-140)||(50644129-50644213)
chr3 (27-149)||(30463975-30464095)
chr3 (54-104)||(8703377-8703427)
chr3 (54-104)||(9055264-9055314)
chr3 (26-132)||(40425080-40425186)
chr3 (34-115)||(16678898-16678978)
chr3 (92-152)||(22853915-22853976)
chr3 (29-69)||(49003163-49003201)
chr3 (26-78)||(7278254-7278306)
chr3 (93-153)||(25548212-25548272)
chr3 (28-132)||(39400312-39400416)
chr3 (31-71)||(52308986-52309026)
[»] chr7 (44 HSPs)
chr7 (27-148)||(34299762-34299883)
chr7 (61-148)||(8237950-8238037)
chr7 (55-140)||(31498656-31498741)
chr7 (56-152)||(44452056-44452153)
chr7 (25-152)||(26871736-26871862)
chr7 (62-148)||(19619993-19620079)
chr7 (55-148)||(43492220-43492314)
chr7 (59-153)||(24610852-24610946)
chr7 (55-149)||(46716173-46716267)
chr7 (71-148)||(5482427-5482503)
chr7 (30-147)||(5907794-5907909)
chr7 (56-149)||(41150033-41150126)
chr7 (56-148)||(3267629-3267721)
chr7 (27-134)||(1360503-1360609)
chr7 (56-153)||(26872798-26872896)
chr7 (30-136)||(27338231-27338337)
chr7 (29-69)||(17157868-17157908)
chr7 (31-134)||(10031954-10032057)
chr7 (29-148)||(18926296-18926414)
chr7 (21-116)||(25176339-25176434)
chr7 (18-77)||(27766776-27766835)
chr7 (56-159)||(39316301-39316404)
chr7 (27-85)||(32699338-32699395)
chr7 (28-85)||(27076213-27076270)
chr7 (28-85)||(27202031-27202088)
chr7 (35-120)||(38988680-38988765)
chr7 (61-153)||(24299145-24299237)
chr7 (61-144)||(25036987-25037071)
chr7 (90-145)||(85720-85775)
chr7 (57-148)||(6392177-6392268)
chr7 (27-66)||(6775197-6775236)
chr7 (29-84)||(27123242-27123297)
chr7 (27-74)||(43996319-43996366)
chr7 (27-134)||(47507576-47507683)
chr7 (90-136)||(10453493-10453539)
chr7 (24-69)||(28663236-28663280)
chr7 (59-152)||(35395906-35395998)
chr7 (28-85)||(42890605-42890661)
chr7 (81-148)||(7432656-7432724)
chr7 (31-79)||(28324193-28324241)
chr7 (29-69)||(32829094-32829134)
chr7 (56-132)||(33887887-33887963)
chr7 (57-148)||(37135451-37135542)
chr7 (26-66)||(44319956-44319996)
[»] scaffold0010 (1 HSPs)
scaffold0010 (53-148)||(26693-26788)
[»] scaffold0236 (1 HSPs)
scaffold0236 (72-153)||(19578-19659)
[»] scaffold0053 (1 HSPs)
scaffold0053 (52-115)||(5753-5816)
[»] scaffold0009 (1 HSPs)
scaffold0009 (56-146)||(189064-189154)
[»] scaffold0037 (1 HSPs)
scaffold0037 (72-148)||(35274-35349)
[»] scaffold0182 (1 HSPs)
scaffold0182 (28-66)||(19657-19695)


Alignment Details
Target: chr5 (Bit Score: 92; Significance: 1e-44; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 367
Target Start/End: Complemental strand, 26686747 - 26686449
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta---tattttataatctttg 168  Q
    |||||||||||| | || ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||| |||   | ||||||  |||||     
T  26686747 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagttagtattttttatggtcttta 26686648  T
Q  169 tcaatgtcttagagacacttgttaacatttccttttnnnnnnnnntatggtacttggtactagtaatatttatagcagtagaatcttatcaaatcaacct 268  Q
      ||||||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26686647 ctaatgtcttagagacaccggttaacatttccttt-aaaaaaaaatatggtacttggtactagtaatatttatagcagtagaatcttatcaaatcaacct 26686549  T
Q  269 ctg-nnnnnnnnnnnnnnnnntcttatcgaatcaagaatattcataacagttctacannnnnnnnnnnngaaagtcataaacagttctacatgttatttg 367  Q
    |||                  ||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||    
T  26686548 ctgaaaaaaagaaaaacaaaatcttatcgaatcaagaatattcataacagttctacattttttctttttgaaagtcataaacagttctacatgttatttg 26686449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 367
Target Start/End: Complemental strand, 26956478 - 26956180
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta---tattttataatctttg 168  Q
    |||||||||||| | || ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||| |||   | ||||||  |||||     
T  26956478 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagttagtattttttatggtcttta 26956379  T
Q  169 tcaatgtcttagagacacttgttaacatttccttttnnnnnnnnntatggtacttggtactagtaatatttatagcagtagaatcttatcaaatcaacct 268  Q
      ||||||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26956378 ctaatgtcttagagacaccggttaacatttccttt-aaaaaaaaatatggtacttggtactagtaatatttatagcagtagaatcttatcaaatcaacct 26956280  T
Q  269 ctg-nnnnnnnnnnnnnnnnntcttatcgaatcaagaatattcataacagttctacannnnnnnnnnnngaaagtcataaacagttctacatgttatttg 367  Q
    |||                  ||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||    
T  26956279 ctgaaaaaaagaaaaacaaaatcttatcgaatcaagaatattcataacagttctacattttttctttttgaaagtcataaacagttctacatgttatttg 26956180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 34032231 - 34032141
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||| ||||||  ||||||||||    
T  34032231 taagggtcttgttaacgagtgtccttggggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttc 34032141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 14309220 - 14309105
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacac 133  Q
    |||||||||||||| ||  ||| | |||||||||||| ||||||||||| || || ||||||||| | ||||||||||||||||||| |||| |||||||    
T  14309220 ttgttaacgagtgttctcagggtattctttaagcatattaaattaagtagttattctttaaaaatatcaaagttttcaatttccaatgcattaattacac 14309121  T
Q  134 aaactttcataaaaaa 149  Q
    ||| ||||||||||||    
T  14309120 aaattttcataaaaaa 14309105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 4695067 - 4695163
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||||||||||||| |||||||||  |||| || ||||||||| |||||||||| |||||||||| || |||||| |||||||| ||||||||||||    
T  4695067 cactctttaagcatgctaaattaaaaaattattctttaaaaatattaaagtttttaatttccaatgcactgattatacaaacttccataaaaaatta 4695163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 10410418 - 10410538
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttga 127  Q
    |||||||||||||||||| ||  |||||||||||||| | | ||||||||||||||  || ||||||||||| | | | ||||||||||||| || || |    
T  10410418 gggtcttgttaacgagtgcccccggggcactctttaaactttctaaattaagtaatatttttttaaaaatgtcagaatattcaatttccaatgcacttta 10410517  T
Q  128 ttacacaaactttcataaaaa 148  Q
    ||  ||||||||| |||||||    
T  10410518 tttaacaaacttttataaaaa 10410538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 26432261 - 26432349
Alignment:
Q  60 ctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||  |||||||||||||| || ||| |||||  |||| |||||||||||||||  | ||||||||| ||||||||||||||    
T  26432261 ctttaagcattttaaattaagtaattatttttttaaaataataaacttttcaatttccaatgtactgattacactaactttcataaaaa 26432349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 38595037 - 38594945
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||| || ||||||||||||||| || ||| ||||||| ||| ||||||||||||||| |||| |||| | ||| ||||||||||| ||||    
T  38595037 tttaagtatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcattaattatataaattttcataaaaatttat 38594945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 39177651 - 39177769
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    |||||||||||| ||||||   | ||||||||||||| || |||||| |||||||| |  ||| ||||| | |||||||||||||||||||||| |||||    
T  39177651 ggtcttgttaactagtgtctccgaggcactctttaag-atgctaaataaagtaattatcctttcaaaatttaaaagttttcaatttccaatacactgatt 39177749  T
Q  130 acacaaactttcataaaaaa 149  Q
     |||||  ||| ||||||||    
T  39177750 gcacaactttttataaaaaa 39177769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 8415651 - 8415769
Alignment:
Q  22 attataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaata 121  Q
    |||||| |||| |||||||||| ||||||| | |||||||| ||| || |  ||| ||| |||| || |||||||| ||||||   ||||||||||||||    
T  8415651 attataggggttttgttaacgaatgtccttagagcactcttgaaggattcctaataaaggaattattctttaaaaaggttaaaaacttcaatttccaata 8415750  T
Q  122 cattgattacacaaacttt 140  Q
    |||||||| || |||||||    
T  8415751 cattgatttcataaacttt 8415769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 10228289 - 10228397
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    |||||||||||||||||||| | ||  ||||||||||||| |||| | |||||||| || ||| ||||| | |||||||||||||||| || || || ||    
T  10228289 ggtcttgttaacgagtgtccctaggt-actctttaagcatgctaa-taaagtaattattctttcaaaatttaaaagttttcaatttccgatgcactggtt 10228386  T
Q  130 acacaaacttt 140  Q
    |||||||||||    
T  10228387 acacaaacttt 10228397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 28639518 - 28639643
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaat--taagtaattgttatttaaaaatgttaaagttttcaatttccaataca-tt 125  Q
    |||| |||||||||||||  | ||| | |||||||||||||  || ||  | ||||||| || ||||||||||||||||||||||  ||||||| || ||    
T  28639518 gggttttgttaacgagtgctcctggagaactctttaagcattatacatatttagtaattattctttaaaaatgttaaagttttcagcttccaatgcactt 28639617  T
Q  126 gattacacaaactttcataaaaaatt 151  Q
     |||||||||||||| ||||||||||    
T  28639618 tattacacaaacttttataaaaaatt 28639643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 17774388 - 17774296
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaattat 153  Q
    |||||||||  ||||| |||||||| || ||||||||| | ||| |||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  17774388 tttaagcattttaaatcaagtaattattctttaaaaatatcaaatttttcaatttccaatacactttattacacaaa-tttcataaaaagttat 17774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 41568775 - 41568714
Alignment:
Q  59 tctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    ||||||||||||||||||||||| ||| || || |||||||| |||||||||||||| ||||    
T  41568775 tctttaagcatactaaattaagttattattcttcaaaaatgtcaaagttttcaattttcaat 41568714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 29829585 - 29829677
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||| |||  ||||||| |||||| || ||||||||||| | | |||||| |||||||| || |||||| |||||| ||||||||||    
T  29829585 cactctttaaacattttaaattatgtaattattttttaaaaatgtcacacttttcagtttccaattcactgattatacaaacattcataaaaa 29829677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 779056 - 779158
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    |||||||||||||||| ||   ||||||||||||| ||| | ||| | ||||||| || |||||||| ||||||  |||| ||||||||| |||||||||    
T  779056 gtcttgttaacgagtgccccctgggcactctttaaacattcaaaaattagtaattattttttaaaaa-gttaaatgtttcgatttccaatgcattgatta 779154  T
Q  131 caca 134  Q
    ||||    
T  779155 caca 779158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 12221433 - 12221523
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    ||||||||| |||||||||||||||| || || ||||||| ||| |||||||| ||||| ||||  | |||||||| ||| |||| |||||    
T  12221433 actctttaaacatactaaattaagtagttattctttaaaattgtcaaagtttttaattttcaatgtactgattacataaattttcgtaaaa 12221523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 17098323 - 17098221
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    |||||||||||||||||||   |||||||||||||| |||   ||| |||| |||| ||||||||||| || |||  |||| |||||||| ||| |||||    
T  17098323 ggtcttgttaacgagtgtcgccggggcactctttaaacatcacaaaataagcaattattatttaaaaaagtcaaatatttcgatttccaagacaatgatt 17098224  T
Q  130 aca 132  Q
    |||    
T  17098223 aca 17098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 2918738 - 2918613
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    ||||||| ||||||||||||| | |||||| |||||||||||||   ||||| | ||||| || ||||||||||| ||   ||  |||||||||| ||||    
T  2918738 taagggttttgttaacgagtgcctttggggtactctttaagcatttcaaatttaataattattttttaaaaatgtcaactattataatttccaatgcatt 2918639  T
Q  126 gattacacaaactttcataaaaaatt 151  Q
     | |||||||  |||||| |||||||    
T  2918638 taatacacaacttttcattaaaaatt 2918613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 23023597 - 23023646
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaa 74  Q
    |||||||||||||||||||||| ||  |||||||||||||||||| ||||    
T  23023597 ataagggtcttgttaacgagtgcccccggggcactctttaagcattctaa 23023646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 25438014 - 25437945
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaa 97  Q
    ||||||||||||||||||| ||  ||| |||||||||||||| |||||||||| | || || ||||||||    
T  25438014 agggtcttgttaacgagtgcccccgggacactctttaagcatgctaaattaagaagttattctttaaaaa 25437945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 30501277 - 30501172
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    ||||||||||||||||| ||   ||||||||||||||||| | ||||| ||||||| || ||| |||| || ||   || |||||||||||||||| | |    
T  30501277 ggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaat 30501178  T
Q  130 acacaa 135  Q
    ||||||    
T  30501177 acacaa 30501172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 30541620 - 30541515
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    ||||||||||||||||| ||   ||||||||||||||||| | ||||| ||||||| || ||| |||| || ||   || |||||||||||||||| | |    
T  30541620 ggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaat 30541521  T
Q  130 acacaa 135  Q
    ||||||    
T  30541520 acacaa 30541515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 41583509 - 41583630
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||||||||||||||||||| ||  ||| ||||||||||| || | ||||| || |||| ||  || |||| ||||||  || ||| ||||||| |||||    
T  41583509 aagggtcttgttaacgagtgcccccgggtcactctttaaggatcccaaatttagaaattattccttcaaaaagttaaatattacaaattccaatgcattg 41583608  T
Q  127 attacacaaactttcataaaaa 148  Q
    | |||||| | |||||||||||    
T  41583609 aatacacagattttcataaaaa 41583630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 30104768 - 30104892
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||||||| |||||||| |||| ||| |||||||||||||||||| | ||||| ||||| | || ||| |||| || ||   || ||||||||||| |||    
T  30104768 ataagggtattgttaacaagtgccctcggggcactctttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcat 30104867  T
Q  125 tgattacacaaactttcataaaaaa 149  Q
    | | |||||||  |||||| |||||    
T  30104868 tcaatacacaacttttcattaaaaa 30104892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 5758554 - 5758649
Alignment:
Q  53 gggcactctttaagcatactaaatt--aagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||||| |||||||  |||||| | || |||||||| |  |||  |||||||| |||||||  ||| ||||||||||||||||||||    
T  5758554 gggcactctttaagcattctaaattaaaagtaactattctttaaaaaagcgaaacatttcaattcccaatac--tgaatacacaaactttcataaaaa 5758649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 36609237 - 36609150
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||| ||| ||||||||| ||||| || || |||||| | |||||||||||||| ||||  | | |||||||||||||| |||||||    
T  36609237 tttaaacattctaaattaaataattattcttcaaaaatatcaaagttttcaattttcaatgtactaattacacaaacttttataaaaa 36609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 112622 - 112584
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  112622 gtcttgttaacgagtgtcatcggggcactctttaagcat 112584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 28207834 - 28207725
Alignment:
Q  37 ttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaa 135  Q
    |||||||||||| ||||| |||||||||||||| |||||||||| ||    || || ||||||| |||||||| ||| || ||| || || ||| |||||    
T  28207834 ttaacgagtgtctttggg-cactctttaagcattctaaattaagcaaaatataattcaaaatgtcaaagtttttaatatcaaatgcactttattgcacaa 28207736  T
Q  136 actttcataaa 146  Q
    |||||||||||    
T  28207735 actttcataaa 28207725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 9330446 - 9330409
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  9330446 tcttgttaacgagtgtccccggggcactctttaagcat 9330409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 21259513 - 21259432
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||||||  |||| || |||||| |||| ||| |||| ||||| |||| || ||||||||||||||| |||||||| ||||    
T  21259513 taaattaaaaaattattctttaaagatgtcaaaatttttaattttcaatgcactgattacacaaacttccataaaaagttat 21259432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 22601786 - 22601867
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||||||||||| || ||||||||| | ||| |||| ||||| ||||| | |||||| ||||| ||| ||||||| ||||    
T  22601786 taaattaagtaattattttttaaaaatatcaaaatttttaattttcaataaactgattatacaaatttttataaaaatttat 22601867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 25767635 - 25767542
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaa 149  Q
    ||||||||||| |  |||||||| ||||  || ||||||||||||||||| |||||||| ||| ||| || ||| ||||| |||| ||||||||    
T  25767635 actctttaagctttttaaattaaataatatttctttaaaaatgttaaagtgttcaattttcaaaacactttattgcacaatcttttataaaaaa 25767542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 31914165 - 31914206
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaa 97  Q
    |||||||||||||| ||||||||||||||| || ||||||||    
T  31914165 cactctttaagcattctaaattaagtaattattctttaaaaa 31914206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 248603 - 248563
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    ||||||||||||||||||||||| |  ||||||||||||||    
T  248603 taagggtcttgttaacgagtgtcttaagggcactctttaag 248563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 2977738 - 2977794
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaa 83  Q
    ||||||||||||||||||||||| ||   |||| ||||||||| ||||| |||||||    
T  2977738 aagggtcttgttaacgagtgtccctgaaacactttttaagcattctaaaataagtaa 2977794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 31672379 - 31672419
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  31672379 gggtcttgttaacgagtgcccccggggcactctttaagcat 31672419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 8e-43; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 40252602 - 40252742
Alignment:
Q  1 cgaggtagtaaattaggtattattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgt 100  Q
    |||||||||||| |||||||||||||||||||||||      |||||| | ||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  40252602 cgaggtagtaaactaggtattattataagggtcttg------agtgtcttcgggacactctttaaacatattaaattaagtaattgttatttaaaaatgt 40252695  T
Q  101 taaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  40252696 taaagttttcaattttcaatacattgattacac-aactttcataaaaa 40252742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 53261531 - 53261645
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacac 133  Q
    ||||||||||||| ||   || |||||||||||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||| || |||||||||    
T  53261531 ttgttaacgagtgcccccaggacactctttaagcatgctaaattaagtaattattctttaaaaatttaaaagttttcaatttccaatgcagtgattacac 53261630  T
Q  134 aaactttcataaaaa 148  Q
    ||||||| |||||||    
T  53261631 aaacttttataaaaa 53261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 148
Target Start/End: Complemental strand, 36876165 - 36876076
Alignment:
Q  59 tctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||| ||||||||||||| | || ||| ||||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  36876165 tctttaagcatgctaaattaagtaactattcttttaaaatgtaaatgttttcaatttccaatacattgattacacaaacttttataaaaa 36876076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 49795113 - 49795232
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgat 128  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| || |||  |||| | ||| |||||||||| |||| ||  |||    
T  49795113 gggtcttgttaacgagtgccctgggggcactctttaagcatactaaataaagtaattatt-tttttaaatttaaaaattttcaattttcaatgcaccgat 49795211  T
Q  129 tacacaaactttcataaaaaa 149  Q
    |||||||||||| ||||||||    
T  49795212 tacacaaacttttataaaaaa 49795232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 52650831 - 52650705
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    ||||||||||||||||||||| |   ||  |||||||||| ||| |||||||||| |||| || |||| |||||| ||| |||||||||| |||| || |    
T  52650831 taagggtcttgttaacgagtgcctccggaacactctttaaacatgctaaattaagaaattattctttacaaatgtcaaaattttcaattttcaattcact 52650732  T
Q  126 gattacacaaactttcataaaaaatta 152  Q
    ||||||||||  |||||||||||||||    
T  52650731 gattacacaatttttcataaaaaatta 52650705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 49951822 - 49951721
Alignment:
Q  35 tgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacaca 134  Q
    ||||||| |||| ||| |||| ||||||||||||| ||||||||||||||| || ||| ||||||| |||||||||||||| |||| ||  |||||||||    
T  49951822 tgttaactagtgccctcggggtactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaagttttcaattttcaatgcaccgattacaca 49951723  T
Q  135 aa 136  Q
    ||    
T  49951722 aa 49951721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 3179113 - 3179025
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    |||||| || |||||| ||||||||  | |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  3179113 tttaagtattctaaatcaagtaattaatttttaaaaaagttaaagttttcaatttccaatacactttattacacaaactttcataaaaa 3179025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 47937832 - 47937955
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgat 128  Q
    ||||||||||||||||||| |  || | ||||||||| |||||||||||| |||||| || |||||||| || |||||||||||||| | || |  || |    
T  47937832 gggtcttgttaacgagtgtgcc-ggagtactctttaaacatactaaattatgtaattattctttaaaaaagtcaaagttttcaattttctatgctctgtt 47937930  T
Q  129 tacacaaactttcataaaaaattat 153  Q
    | |||||||||||||||||||||||    
T  47937931 tgcacaaactttcataaaaaattat 47937955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 22889236 - 22889319
Alignment:
Q  37 ttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    |||||| ||| | |||||||||||||||| | | |||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  22889236 ttaacgggtgactttggggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaat 22889319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 22940900 - 22940983
Alignment:
Q  37 ttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    |||||| ||| | |||||||||||||||| | | |||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  22940900 ttaacgggtgactttggggcactctttaaactttctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaat 22940983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 23136642 - 23136525
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    |||||||||||||||||   |  |||||| ||||| ||| |||||||||||||| || ||| ||||| | ||||||||||||||||||| || |||||||    
T  23136642 tcttgttaacgagtgtctccgaagcactccttaagtatattaaattaagtaattattcttttaaaatttaaaagttttcaatttccaatgcactgattac 23136543  T
Q  132 acaaactttcataaaaaa 149  Q
    |||| |||| | ||||||    
T  23136542 acaatcttttacaaaaaa 23136525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 8297827 - 8297959
Alignment:
Q  17 gtattattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttc 116  Q
    ||||| || ||||||||||||||||||||| ||  |||||||||||||||||| | ||||| ||||||| || ||| ||||||| ||   || |||||||    
T  8297827 gtatttttttaagggtcttgttaacgagtgcccccggggcactctttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttc 8297926  T
Q  117 caatacattgattacacaaactttcataaaaaa 149  Q
    |||| |||| | |||||||  |||||| |||||    
T  8297927 caatgcattcaatacacaatttttcattaaaaa 8297959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 27748412 - 27748526
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    |||||||||||||||||   ||| |||||||||| ||| ||||| ||||||||| || ||||||| | || || |||||||||| ||||| || ||||||    
T  27748412 tcttgttaacgagtgtcac-gggacactctttaaacattctaaactaagtaattattttttaaaagtatttaacttttcaattttcaatatatcgattac 27748510  T
Q  132 acaaactttcataaaa 147  Q
    || |||||||||||||    
T  27748511 actaactttcataaaa 27748526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 37461585 - 37461491
Alignment:
Q  54 ggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaa 149  Q
    |||||||||||| ||| |||||||||||||||   |||| ||||||| ||||||||||||||  ||| ||  ||||||||||||||||||||||||    
T  37461585 ggcactctttaaacatgctaaattaagtaattaa-attttaaaatgtcaaagttttcaatttttaatgcaccgattacacaaactttcataaaaaa 37461491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 41370313 - 41370187
Alignment:
Q  22 attataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaata 121  Q
    ||||| ||||||||||||||||||||    || |||||| |||||||  | |||||||| |||| ||  | ||||| ||||||  ||||||||| ||||     
T  41370313 attattagggtcttgttaacgagtgtttccggagcactcattaagcaatccaaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatg 41370214  T
Q  122 cattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| |||||||||||    
T  41370213 cattgattacacaaattttcataaaaa 41370187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 44570181 - 44570123
Alignment:
Q  90 tttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||||||    
T  44570181 tttaaaaatgttaaattttttaattttcaatgcattgattacacaaactttcataaaaa 44570123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 45743326 - 45743400
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaa 146  Q
    ||||||||| |||| || ||||||||||| |||||||||||||| ||||||| |||||||||||  |||||||||    
T  45743326 taaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatacagtgattacacaacttttcataaa 45743400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 55 - 148
Target Start/End: Original strand, 31262910 - 31263002
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||  |||  | ||| |||||||||||| |||||||    
T  31262910 gcactctttaagcattctaaattaagtaattatt-tttaaaaatgtcaaagttttcgattttgaatgtactgactacacaaacttttataaaaa 31263002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 23016361 - 23016241
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||||||| ||||||| | ||  |||||||||||| ||||| | |||||||| |||| ||||||||| | || |||  |||||||||||||| ||||||    
T  23016361 agggtcttgctaacgagcgcccccggggcactctttgagcattccaaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattga 23016262  T
Q  128 ttacacaaactttcataaaaa 148  Q
     |||| | ||||| |||||||    
T  23016261 atacatagacttttataaaaa 23016241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 25042837 - 25042753
Alignment:
Q  60 ctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||| ||||||||||||    || ||||||||||||||| ||||||||||| |||  | |||||||||||||||| |||||||    
T  25042837 ctttaagcatgctaaattaagta----ttctttaaaaatgttaaaattttcaatttctaatgtactgattacacaaacttttataaaaa 25042753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 48097923 - 48098025
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    |||||||||||||||||   || ||||| |||||| || |||||||||| |||| || |||||||| ||||||   |||||||||||||||||| | |||    
T  48097923 tcttgttaacgagtgtctccggagcactttttaagtattctaaattaagaaattattctttaaaaaagttaaatagttcaatttccaatacattaaatac 48098022  T
Q  132 aca 134  Q
    |||    
T  48098023 aca 48098025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 21687720 - 21687604
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgatta 130  Q
    ||||||||||||||| || |||| |||||||||||| | |||| |||||||||  || ||||| ||| | ||||| |||||||| |||| || || ||||    
T  21687720 tcttgttaacgagtgcccctggg-cactctttaagctttctaagttaagtaatatttctttaataatatcaaagtgttcaattttcaatgcactttatta 21687622  T
Q  131 cacaaactttcataaaaa 148  Q
    |||||||||| |||||||    
T  21687621 cacaaacttttataaaaa 21687604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 24175535 - 24175482
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaa 83  Q
    |||||||||||||||||||||| || |||||||||||||| ||||||| |||||    
T  24175535 ggtcttgttaacgagtgtccttaggacactctttaagcatcctaaatttagtaa 24175482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 41394078 - 41394009
Alignment:
Q  72 taaattaagtaattgttatttaaaaat-gttaaagttttcaatttccaatacattgattacacaaacttt 140  Q
    |||||||||||||| |||||||||||  |||||||||||||||||| ||| | || ||||||||||||||    
T  41394078 taaattaagtaattattatttaaaaaaagttaaagttttcaatttctaatgcgttaattacacaaacttt 41394009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 38354577 - 38354501
Alignment:
Q  72 taaattaagtaattgttattt-aaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    |||||||||||||| || ||| |||||||| ||| ||||||||||| |||||| ||||||||| |||||| ||||||    
T  38354577 taaattaagtaattatttttttaaaaatgtcaaacttttcaatttctaatacactgattacactaactttaataaaa 38354501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 20022234 - 20022281
Alignment:
Q  105 gttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||    
T  20022234 gttttcaatttccaatgcattgattgtacaaactttcataaaaaatta 20022281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 39767212 - 39767295
Alignment:
Q  66 gcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaa 149  Q
    |||| |||||| |||||||| || ||| |||||   |||||||| |||||||||| |||| |||||||||||||| ||||||||    
T  39767212 gcatgctaaataaagtaattattttttcaaaattaaaaagtttttaatttccaatgcattaattacacaaacttttataaaaaa 39767295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 42370450 - 42370383
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaa 97  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||  ||| |||| || ||||||||    
T  42370450 ggtcttgttaacgagtgtttttggggcactctttaagcataccaaaacaagcaattattctttaaaaa 42370383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 4391968 - 4392061
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagt-tttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||| || ||||||| ||||||| || ||||||||||| |||   ||||||||| ||||||| |||||||||||| ||| ||||||| ||||    
T  4391968 tttaagtattctaaatttagtaattattctttaaaaatgtcaaaaaatttcaattttcaatacactgattacacaaatttttataaaaatttat 4392061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 17970801 - 17970882
Alignment:
Q  52 ggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaag-ttttcaatttccaatacattgattaca 132  Q
    ||||||||||||||||||  |||||||||||||| ||  || ||||| | |||| ||||||||||||||| || ||||||||    
T  17970801 ggggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattaca 17970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 35153262 - 35153339
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    |||||||| | ||| || |||||||||||||||||||||||||| |||| || || ||| |||||||||| |||||||    
T  35153262 taaattaaatcattattctttaaaaatgttaaagttttcaattttcaatgcactttattgcacaaacttttataaaaa 35153339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 38682081 - 38682008
Alignment:
Q  76 ttaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    ||||||||||  | ||||||| |||||||||||||||||| ||||||| || ||||||||| |||| |||||||    
T  38682081 ttaagtaattaatctttaaaattgttaaagttttcaattttcaatacactttattacacaagcttttataaaaa 38682008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 2063433 - 2063562
Alignment:
Q  18 tattattataagggtcttgttaacgagtg-tccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttc 116  Q
    ||||| |||| |||||||||||||||||| |||   || |||||||||||||| |||||||| | | || || |||||||| || |||   |||||||||    
T  2063433 tattaatatatgggtcttgttaacgagtgctccc--ggacactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttc 2063530  T
Q  117 caatacattgattacacaaactttcataaaaa 148  Q
    ||||  ||| | |||||||| |||||||||||    
T  2063531 caatgtattaaatacacaaattttcataaaaa 2063562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 40173589 - 40173525
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    |||||||||| ||| ||||||||||||||  ||  ||||||||||||||||||| ||||| ||||    
T  40173589 cactctttaaacattctaaattaagtaatcattcattaaaaatgttaaagtttttaattttcaat 40173525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 41462005 - 41462057
Alignment:
Q  17 gtattattataagggtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    |||||||| | ||| |||||||||||||||||| ||| |||||||||||||||    
T  41462005 gtattattgttaggatcttgttaacgagtgtccctggagcactctttaagcat 41462057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 54700984 - 54700924
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    ||||| |||||||||||||||||| | ||| ||||||||||||||  |||| |||||||||    
T  54700984 ataagtgtcttgttaacgagtgtcatcgggacactctttaagcattttaaaataagtaatt 54700924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 7996746 - 7996800
Alignment:
Q  94 aaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||| |||||||||| ||||||||||     ||||||||||||||||||||||||||||    
T  7996746 aaaattttaaagtttttaatttccaat-----gattacacaaactttcataaaaaattat 7996800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 18939967 - 18939876
Alignment:
Q  68 atactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattatatttta 159  Q
    |||||||||||||||||| || ||||||||  ||||| ||||||||||  |||  |||  || |||||||||| ||||||| |||| |||||    
T  18939967 atactaaattaagtaattattctttaaaaaaattaaaattttcaatttttaatgtatttgttgcacaaacttttataaaaagttatctttta 18939876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 30978786 - 30978735
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaag 80  Q
    |||||||||||| ||||| || ||||||||||||||||||| | ||||||||    
T  30978786 gggtcttgttaaggagtgcccctggggcactctttaagcattccaaattaag 30978735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 32175402 - 32175457
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    ||||||||||| |||||||| || || |||||||||||||  ||||||||||||||    
T  32175402 ggtcttgttaaagagtgtccatgaggtactctttaagcattttaaattaagtaatt 32175457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 50617492 - 50617583
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||| |||  |||||||||||||| || ||| ||||||| ||| ||||||||||  ||| || ||||| ||| ||||||||| ||||    
T  50617492 actctttaaacattataaattaagtaattatttttttaaaatgtcaaacttttcaatttttaatgcactgattgcactaactttcatcaaaa 50617583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 53622297 - 53622360
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttcca 118  Q
    ||||||||||| |||  |||||||||||||| || ||| ||||||| ||| |||||||||||||    
T  53622297 gcactctttaaacatcttaaattaagtaattttttttttaaaatgtcaaaattttcaatttcca 53622360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 10505950 - 10506012
Alignment:
Q  87 ttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    |||||||||||| | |||||||||||||| ||||| | || |||||||||||||| |||||||    
T  10505950 ttatttaaaaatctcaaagttttcaatttacaatatattttattacacaaactttaataaaaa 10506012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 28116723 - 28116653
Alignment:
Q  77 taagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    ||||||||| || ||||||||  ||||   |||||||||| |||||||||  |||||||||||||||||||    
T  28116723 taagtaattattctttaaaaaaattaagtatttcaatttctaatacattggatacacaaactttcataaaa 28116653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 49623057 - 49622964
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    |||| |||||||||  |||||||||||||| ||   ||||||||| ||| ||||||||||| |||| | || |||||||||| ||||| |||||    
T  49623057 cactatttaagcattttaaattaagtaattattccataaaaatgtcaaaattttcaatttctaatatactttattacacaaattttcacaaaaa 49622964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20394602 - 20394702
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||||||| |||||||||||||||    | ||||||||||||||| | ||||| ||||||| || ||| |||| || ||   || |||||||||||||||    
T  20394602 ataagggttttgttaacgagtgtctccagagcactctttaagcatcccaaatttagtaattattcttttaaaaagtgaactattacaatttccaatacat 20394701  T
Q  125 t 125  Q
    |    
T  20394702 t 20394702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 37138302 - 37138263
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  37138302 taagggtcttgttaacgagtgttc-tggggcactctttaag 37138263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 45900287 - 45900239
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaatt 77  Q
    |||||||||||||||||| ||  | |||||||||||||||| |||||||    
T  45900287 gggtcttgttaacgagtgcccccgaggcactctttaagcatcctaaatt 45900239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 46521469 - 46521509
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  46521469 taagggtcttgttaacgagtgcccttagagcactctttaag 46521509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 46570633 - 46570545
Alignment:
Q  59 tctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaa 146  Q
    ||||||| |||  |||||||||| |||  | |||||||||||||||||||| |||||  |||| | || |||||||||| |||||||||    
T  46570633 tctttaaacattttaaattaagttattactctttaaaaatgttaaagtttttaatttttaatatattttattacacaaattttcataaa 46570545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 51291052 - 51291172
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    ||||||||||||||||| || ||| | |||||||||||| ||| |  ||| ||| | || || |||||||   ||||||  ||||||||||||| || |     
T  51291052 aagggtcttgttaacgaatgccctcgaggcactctttaaacattcctaatgaagaagttattctttaaaataattaaagacttcaatttccaatgcaata 51291151  T
Q  127 attacacaaactttcataaaa 147  Q
    | | |||||||||||||||||    
T  51291152 aatgcacaaactttcataaaa 51291172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 8e-40; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 48947164 - 48947291
Alignment:
Q  21 tattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    ||||||| |||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  48947164 tattatatgggttttgttaacgagtgcccctggggcattctttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaat 48947263  T
Q  121 acattgattacacaaactttcataaaaa 148  Q
     || |||||||||||| |||||||||||    
T  48947264 gcactgattacacaaattttcataaaaa 48947291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 3047833 - 3047958
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||||||||||||| ||||| ||  |||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| ||||||||| |||||    
T  3047833 aagggtcttgttaaagagtgcccccggggcactctttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattg 3047932  T
Q  127 attacacaaactttcataaaaaatta 152  Q
    |||| |||||||||||||||||||||    
T  3047933 attaaacaaactttcataaaaaatta 3047958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 16113883 - 16114007
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||| ||||||||||| || ||| ||||||| ||||||||||||||||||| ||     
T  16113883 ataagggtcttgttaacgagtgcctccggggcactctttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcac 16113982  T
Q  125 tgattacacaaactttcataaaaaa 149  Q
    |||||||||||||||||||||||||    
T  16113983 tgattacacaaactttcataaaaaa 16114007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 39973863 - 39973984
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||||||| |||| |||||||||     
T  39973863 tcttgttaacgagtgtctccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgattat 39973962  T
Q  132 acaaactttcataaaaaattat 153  Q
    ||||||||||||||||| ||||    
T  39973963 acaaactttcataaaaagttat 39973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 40053251 - 40053380
Alignment:
Q  19 attattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttcca 118  Q
    |||||| || ||||||||||||||||||||  | | ||||| ||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||| ||    
T  40053251 attattttatgggtcttgttaacgagtgtctctagtgcactttttaagcattctaaattaggtaattgttctttaaaaatgtcaaagttttcaattttca 40053350  T
Q  119 atacattgattacacaaactttcataaaaa 148  Q
    ||||||| ||||||||||||||||||||||    
T  40053351 atacatttattacacaaactttcataaaaa 40053380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 31042969 - 31043090
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgat 128  Q
    ||||||||||||||| |||||  ||  || ||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||| |||| |||||||    
T  31042969 gggtcttgttaacgaatgtccccggcacagtctttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgat 31043068  T
Q  129 tacacaaactttcataaaaaat 150  Q
    ||||||||||||||||| ||||    
T  31043069 tacacaaactttcataagaaat 31043090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 34861351 - 34861232
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||||||||||||||||| ||  |||||||||||||||||| ||||||||||||||| || ||||||||||| |||  ||||||||||||||||| |||    
T  34861351 agggtcttgttaacgagtgccccgggggcactctttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaatacactga 34861252  T
Q  128 ttacacaaactttcataaaa 147  Q
    || ||| || ||||||||||    
T  34861251 tttcactaaatttcataaaa 34861232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 35543549 - 35543430
Alignment:
Q  21 tattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    |||| ||| ||||||||||||||||| | |||| ||||| ||||||||| ||||||||||||||| || ||| ||||| | |||||||||||||||||||    
T  35543549 tattgtaaaggtcttgttaacgagtgcctttggagcactatttaagcatgctaaattaagtaattatttttttaaaatatcaaagttttcaatttccaat 35543450  T
Q  121 acattgattacacaaacttt 140  Q
    | ||| ||||||||||||||    
T  35543449 atattaattacacaaacttt 35543430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 33791874 - 33791758
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    |||||||||||||||||| | |   |||||||||| || ||||||||||||||| || ||| ||||||| ||| ||||||||||||||||||  ||||||    
T  33791874 tcttgttaacgagtgtccctagactactctttaagtatgctaaattaagtaattattcttttaaaatgtcaaatttttcaatttccaatacaccgattac 33791775  T
Q  132 acaaactttcataaaaa 148  Q
    |||||||||||||||||    
T  33791774 acaaactttcataaaaa 33791758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 35259181 - 35259079
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    ||||||||||||||| ||| ||||||||||||||| || |||||||||| |||| || ||||||||||| ||||||||||||||||||| |  |||||||    
T  35259181 tcttgttaacgagtgccctcggggcactctttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattac 35259082  T
Q  132 aca 134  Q
    |||    
T  35259081 aca 35259079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 49033 - 48905
Alignment:
Q  20 ttattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaa 119  Q
    |||||| | |||||||||||||||||  || | || ||||| |||| ||| ||||||||||||||| || || |||||||| |||||||||||||| |||    
T  49033 ttattaaatgggtcttgttaacgagttcccctaggacactcgttaatcatgctaaattaagtaattattcttgaaaaatgtaaaagttttcaattttcaa 48934  T
Q  120 tacattgattacacaaactttcataaaaa 148  Q
    | ||  |||||||||||||||||||||||    
T  48933 tgcaccgattacacaaactttcataaaaa 48905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 31807919 - 31807800
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttg 126  Q
    ||||||||||||||||||| ||  || ||||| ||||||||| ||||| ||||||||| || ||||||||||| | |||||||||||| |||| || ||     
T  31807919 agggtcttgttaacgagtgcccccggagcactatttaagcattctaaaataagtaattattctttaaaaatgtgatagttttcaattttcaatgcacttt 31807820  T
Q  127 attacacaaactttcataaa 146  Q
    ||||||||||||||||||||    
T  31807819 attacacaaactttcataaa 31807800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 42573884 - 42573788
Alignment:
Q  52 ggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||||||||||| ||||||||||||||| || ||| |||||||||| ||||||||||| |||| || |||||| ||||||||  |||||||    
T  42573884 ggggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgcactgattatacaaacttcaataaaaa 42573788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 152
Target Start/End: Complemental strand, 27934839 - 27934743
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatac-attgattacacaaactttcataaaaaatta 152  Q
    ||||||||||||| ||||||||| ||||| |||||||||||| | |||  ||||||||| |||||| ||| |||||||||||||| |||||||||||    
T  27934839 actctttaagcattctaaattaaataattattatttaaaaatatcaaaagtttcaattttcaatacaatttattacacaaacttttataaaaaatta 27934743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 4040866 - 4040985
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacac 133  Q
    |||||||| ||||||| | ||  |||||||||||||  |||||||||||||| |||  ||||| ||| |||||||||||||| ||||| | | |||||||    
T  4040866 ttgttaacaagtgtccataggatactctttaagcattttaaattaagtaattattacataaaagtgtcaaagttttcaattttcaatatacttattacac 4040965  T
Q  134 aaactttcataaaaaattat 153  Q
    ||||||||| ||||| ||||    
T  4040966 aaactttcacaaaaagttat 4040985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 4521146 - 4521043
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||||||||||||||||||| |  | |||||||||||||||||||||||  |||  ||| || |||||||| ||||||  |||||||||||||| |||||    
T  4521146 aagggtcttgttaacgagtgcc--tcgggcactctttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattg 4521049  T
Q  127 attaca 132  Q
    ||||||    
T  4521048 attaca 4521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 49478780 - 49478891
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaa-gttttcaatttccaatacattga 127  Q
    ||||||||||||||||||||  ||| | |||||||||||||  | | |||||||||| || |||  |||||| ||| |||||||||||||||| || |||    
T  49478780 gggtcttgttaacgagtgtctctggagtactctttaagcatgttgagttaagtaattattttttttaaatgtcaaaagttttcaatttccaatgcactga 49478879  T
Q  128 ttacacaaactt 139  Q
    ||||||||||||    
T  49478880 ttacacaaactt 49478891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 51904664 - 51904585
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatt 151  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||||| |    | |||||||||||||||||||||||    
T  51904664 taaattaagtaattattcttttaaaatgttaaagttttcaatttccaatgccccaactacacaaactttcataaaaaatt 51904585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 9931808 - 9931866
Alignment:
Q  94 aaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  9931808 aaaatgtcaaagttttcaattttcaatacattaattacacaaacttttataaaaaatta 9931866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 26700245 - 26700335
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    ||||||||| |||||||||| |||||||| || ||| |||||   |||||||| ||||||||||||| | |||||||||||||| ||||||    
T  26700245 actctttaaacatactaaataaagtaattattcttttaaaattaaaaagtttttaatttccaatacactcattacacaaacttttataaaa 26700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 32572766 - 32572887
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    ||||| ||||||||||||| || | |||||||||||||||||||||| || || ||||||||||||| || |||  ||  || ||||||||||||  |||    
T  32572766 gtcttattaacgagtgtccctgcgacactctttaagcatactaaatttagaaaatgttatttaaaaaagtcaaatgttataaattccaatacattactta 32572865  T
Q  131 cacaaactttcataaaaaatta 152  Q
    || ||| |||  ||||||||||    
T  32572866 cataaatttttgtaaaaaatta 32572887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 290601 - 290669
Alignment:
Q  71 ctaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactt 139  Q
    ||||||||||||||| || ||| ||||||| |||||||||||||| |||| || |||||||||||||||    
T  290601 ctaaattaagtaattattcttttaaaatgtcaaagttttcaatttacaatgcactgattacacaaactt 290669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 10355138 - 10355042
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    ||||||||||| || |||||| |||||||| || ||||||||| |  || |||||||||||||||| |  |||| ||||||||| ||||||||||||    
T  10355138 cactctttaagtattctaaataaagtaattattttttaaaaatatctaaattttcaatttccaatataccgatttcacaaacttccataaaaaatta 10355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 24034055 - 24034143
Alignment:
Q  59 tctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    ||||||||||||||||||  ||||||| || ||| ||||| | ||||||||||||||| ||| || |||||||||||||| | ||||||    
T  24034055 tctttaagcatactaaatagagtaattattctttcaaaatttaaaagttttcaatttctaatgcactgattacacaaactcttataaaa 24034143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 148
Target Start/End: Original strand, 40286853 - 40286945
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||||||| |||||| |||| ||| || ||| |||||   ||||||||||||||||||| || ||| |||||||||||| |||||||    
T  40286853 cactctttaagcatgctaaataaagtcattattctttcaaaattaaaaagttttcaatttccaatgcactgagtacacaaacttttataaaaa 40286945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 46804935 - 46804846
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataa 145  Q
    |||||||||||||| ||||||||| ||||  || |||||||||| |||| |||  |||||||||| || ||||||||  |||||||||||    
T  46804935 cactctttaagcattctaaattaattaataattttttaaaaatgataaactttctaatttccaatgcactgattacattaactttcataa 46804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 39150550 - 39150606
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    |||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||||    
T  39150550 gggtcttgttaacgagtgcccccggggcactctttaagcatcctaaatttagtaatt 39150606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 36321739 - 36321660
Alignment:
Q  53 gggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattaca 132  Q
    ||||||||||||||||||| |||  |||||||| || |||| ||| ||||||  |||| ||||||||| |||||||||||    
T  36321739 gggcactctttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattaca 36321660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 37037625 - 37037720
Alignment:
Q  39 aacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacaca 134  Q
    ||||||||| |  |||||| |||||||||||  ||||   ||||||| || || ||||| ||||||  ||||||||||||||||||||||||||||    
T  37037625 aacgagtgttccaggggcattctttaagcattttaaaaatagtaattatttttaaaaaaagttaaatgtttcaatttccaatacattgattacaca 37037720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 39912350 - 39912280
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaa 97  Q
    |||||||||||||||||||| ||  ||| |||||||||||||| |||||||| | | || |||||||||||    
T  39912350 aagggtcttgttaacgagtgcccccgggacactctttaagcatgctaaattaggaagttattatttaaaaa 39912280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 30548318 - 30548359
Alignment:
Q  106 ttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  30548318 ttttcaatttccaatacactgattacactaactttcataaaa 30548359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 32787351 - 32787274
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    ||||||||||||||  | ||||||||||||||||| ||||||| | |||||| || |||||||||| ||| |||||||    
T  32787351 taaattaagtaattaatctttaaaaatgttaaagtgttcaattcctaatacattttattacacaaatttttataaaaa 32787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 759333 - 759241
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaatta 152  Q
    ||||||||| ||||||||| ||||  ||   ||||| ||| ||||||| |||||||||||||| || ||||||||||||| ||||||| ||||    
T  759333 tttaagcattctaaattaaataatcatttcataaaattgtcaaagtttccaatttccaatacactttattacacaaacttacataaaagatta 759241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 4540804 - 4540764
Alignment:
Q  112 atttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  4540804 atttccaatacattgaatacacaaattttcataaaaaatta 4540764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 7549808 - 7549848
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  7549808 taagggtcttgttaacgagtgtcctcgggacactctttaag 7549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 38172665 - 38172737
Alignment:
Q  81 taattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||| || ||||||||||| |||||||| |||||  ||| || |||||||||||||||| ||||||| ||||    
T  38172665 taattattctttaaaaatgtaaaagtttttaatttttaatgcactgattacacaaacttttataaaaagttat 38172737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 45925460 - 45925572
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaag-taattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||||||||||||||||||||  || ||||||||||| || || ||| |||  |||| || |||||||| || |||  ||  |||||||||||||||||    
T  45925460 gggtcttgttaacgagtgtcctaaggacactctttaaggattcttaataaagaaaattattctttaaaaaagtcaaaaattcaaatttccaatacattga 45925559  T
Q  128 ttacacaaacttt 140  Q
    || || |||||||    
T  45925560 tttcataaacttt 45925572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 290960 - 290869
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    |||||||||||||| ||||||  ||||||| || ||| ||||| | |||||||| |||||||||| |  ||| |||||| ||||| ||||||    
T  290960 cactctttaagcatgctaaatagagtaattattctttcaaaatttaaaagtttttaatttccaatgcgctgactacacatacttttataaaa 290869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 30350989 - 30350938
Alignment:
Q  95 aaatgttaaagttttcaatttccaatacattgattacacaaactttcataaa 146  Q
    |||||||||  |||||||||| |||| |||||||||||| ||||||||||||    
T  30350989 aaatgttaattttttcaattttcaatgcattgattacactaactttcataaa 30350938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 36321596 - 36321627
Alignment:
Q  35 tgttaacgagtgtccttggggcactctttaag 66  Q
    ||||||||||||||||||||||||||||||||    
T  36321596 tgttaacgagtgtccttggggcactctttaag 36321627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 40570646 - 40570761
Alignment:
Q  18 tattattataagggtcttgttaacgagtgtccttggggcactctttaagc-atactaaattaagtaattgttatttaaaaatgttaaagttttcaatttc 116  Q
    |||| ||||| |||||||||||||||||| ||  |||||||||||||||| || | ||| | || |||| || |||||||| || |||  |||| |||||    
T  40570646 tatttttatacgggtcttgttaacgagtgcccccggggcactctttaagctatccaaaaattagcaattattctttaaaaaagtcaaacatttcgatttc 40570745  T
Q  117 caatacattgattaca 132  Q
    | | ||||||||||||    
T  40570746 ctagacattgattaca 40570761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 1656447 - 1656529
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaattat 153  Q
    |||||||| ||||| || ||||||||||| ||| ||||||||||||||| || || | |||||||  ||||||||||| ||||    
T  1656447 taaattaaataattattttttaaaaatgtcaaaattttcaatttccaatgcattttaatacacaatttttcataaaaagttat 1656529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 2632998 - 2633100
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    |||||||||||||||| ||   ||| || ||||||||| ||| ||||| |||| |||  || |||||||| ||||||  |||| |||||||||| |||||    
T  2632998 agggtcttgttaacgactgcatttgcggtactctttaaacattctaaaataagcaataattttttaaaaaagttaaatgtttcgatttccaatatattga 2633097  T
Q  128 tta 130  Q
    |||    
T  2633098 tta 2633100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 14758525 - 14758563
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaa 65  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  14758525 aagggtcttgttaacgagtgtcctaagggcactctttaa 14758563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 3506940 - 3506993
Alignment:
Q  21 tattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaa 74  Q
    |||||| ||||||| ||||||||||| ||  |||||||||||||||||| ||||    
T  3506940 tattattagggtctcgttaacgagtgcccgcggggcactctttaagcattctaa 3506993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 18038940 - 18038985
Alignment:
Q  108 ttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||||||| || |||||| |||||||| ||||||||||||||||    
T  18038940 ttcaatttccgatgcattgaatacacaaattttcataaaaaattat 18038985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 29204109 - 29204072
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    |||||||||||||||||||||||  |||||||||||||    
T  29204109 gggtcttgttaacgagtgtccttaaggcactctttaag 29204072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 40377006 - 40377047
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    |||||||||||||||||||||| || | ||||||||||||||    
T  40377006 ataagggtcttgttaacgagtgccccttgggcactctttaag 40377047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 33744274 - 33744170
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||||||||| | ||||| || | | |||||||||||||||  |||| ||||||||| || ||| |||| || |||  |||| |||| |||| ||||||    
T  33744274 agggtcttgtttaggagtgccccttgagcactctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattga 33744175  T
Q  128 ttaca 132  Q
    |||||    
T  33744174 ttaca 33744170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 45753482 - 45753542
Alignment:
Q  93 aaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||||| |||  ||||||||| |||| ||||||||||||||| ||||| |||| |||||    
T  45753482 aaaaatgtcaaatatttcaattttcaatgcattgattacacaaattttcaaaaaacattat 45753542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 47031457 - 47031557
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacac 133  Q
    |||||||||| |||  | ||| |||||||||| ||| ||||| ||||||||| || ||| ||||  | |||  |||| |||||||||||||| |||||||    
T  47031457 ttgttaacgattgttttcgggacactctttaaacattctaaaataagtaattatttttttaaaaaataaaatatttcgatttccaatacattcattacac 47031556  T
Q  134 a 134  Q
    |    
T  47031557 a 47031557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 48454658 - 48454602
Alignment:
Q  92 taaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||| ||||||  ||||||| | |||||||||||||| ||||| |||||||||||    
T  48454658 taaaaaagttaaatatttcaatcttcaatacattgattatacaaaatttcataaaaa 48454602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 52692521 - 52692573
Alignment:
Q  90 tttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttca 142  Q
    |||||||||||||| |||||||| || |||| || ||||| ||||||||||||    
T  52692521 tttaaaaatgttaatgttttcaactttcaatgcaatgattgcacaaactttca 52692573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 5e-38; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 1876625 - 1876497
Alignment:
Q  24 tataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca 123  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||||| ||||||||||||||| || ||| ||||||| ||| ||||||||||||||| ||    
T  1876625 tataaggttcttgttaacgagtgcccccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgca 1876526  T
Q  124 ttgattacacaaactttcataaaaaatta 152  Q
     ||||||||||||||||||||||||||||    
T  1876525 ctgattacacaaactttcataaaaaatta 1876497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 12002237 - 12002354
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||||| || ||||||    
T  12002237 gtcttgttaacgagtatcctcggggcactctttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgatta 12002336  T
Q  131 cacaaactttcataaaaa 148  Q
    |||||| ||| |||||||    
T  12002337 cacaaatttttataaaaa 12002354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 11533196 - 11533323
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||||||||||||||||||||||  | ||| |||||||||| |||  ||||||||  |||| || ||||||||||| ||||||||||||||||||| ||     
T  11533196 ataagggtcttgttaacgagtgttttcgggacactctttaaacatgttaaattaataaattattctttaaaaatgtcaaagttttcaatttccaatgcac 11533295  T
Q  125 tgattacacaaactttcataaaaaatta 152  Q
    |||   ||||||||||||||||||||||    
T  11533296 tgaaggcacaaactttcataaaaaatta 11533323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 32271170 - 32271257
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||  ||||||||| |||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  32271170 tttaagcattttaaattaagaaattattttttaaaaatgttaaagttttcaatttctaattcattgattacacaaacttccataaaaa 32271257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 7627958 - 7627853
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattatat 155  Q
    |||||||||| |||  |||||||||||||| || || |||||||| |||||||| |||||| |||||| |||| |||||||||||||||||||||||  |    
T  7627958 cactctttaaacatgttaaattaagtaattatttttaaaaaatgtgaaagtttttaatttctaatacactgatcacacaaactttcataaaaaattactt 7627859  T
Q  156 tttata 161  Q
    ||||||    
T  7627858 tttata 7627853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 14017007 - 14016882
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||| |||||||||| |||| |   |||||||||||||||||| |||||| |||||||  || ||| ||||| | ||||||||||||||||||| || ||    
T  14017007 aaggttcttgttaactagtgcctccggggcactctttaagcatgctaaataaagtaatgattctttcaaaatttaaaagttttcaatttccaatgcactg 14016908  T
Q  127 attacacaaactttcataaaaaatta 152  Q
    || ||||||||||| |||||||||||    
T  14016907 atcacacaaacttttataaaaaatta 14016882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 18842391 - 18842275
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    |||| ||||||||||| ||| |||  ||||||||| |||  |||||||||||||| || ||||||||||| |||||||| |||||  |||  ||||||||    
T  18842391 gtctcgttaacgagtgccctcgggatactctttaaccattttaaattaagtaattattctttaaaaatgtcaaagtttttaatttttaatgtattgatta 18842292  T
Q  131 cacaaactttcataaaa 147  Q
    |||||||||| ||||||    
T  18842291 cacaaacttttataaaa 18842275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 40629062 - 40628982
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||||| || |||||||||||||||| |||||| ||||    
T  40629062 taaattaagtaattattcattaaaaatgttaaagtttttaatttccaattcactgattacacaaacttttataaaagatta 40628982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 39594621 - 39594503
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacac 133  Q
    ||||||||||||| ||| ||  ||||||||||| || |||||||||| |||| || |||| |||| | |||||||||||||| || |||| |||||| ||    
T  39594621 ttgttaacgagtg-cctcggaacactctttaagaatgctaaattaagaaattattctttataaatatcaaagttttcaattttcattacactgattatac 39594523  T
Q  134 aaactttcataaaaaattat 153  Q
    ||||||||||||||| ||||    
T  39594522 aaactttcataaaaagttat 39594503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 44220843 - 44220729
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    ||||||||||||||||||  || ||||| |  ||||||  |||||||||||||| || ||| ||||||| ||||||||||||||||||| || | |||||    
T  44220843 tcttgttaacgagtgtccccggagcactat--aagcatgttaaattaagtaattattcttttaaaatgtcaaagttttcaatttccaatgcactcattac 44220746  T
Q  132 acaaactttcataaaaa 148  Q
    |||||| | ||||||||    
T  44220745 acaaacgtccataaaaa 44220729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 24869379 - 24869498
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    ||||||||||||||||||||| || || |||||||||||| ||| ||||||||||||||| || | |||||||     | ||||||||||||||| || |    
T  24869379 taagggtcttgttaacgagtgcccctgtggcactctttaaacatgctaaattaagtaattattctctaaaaat-----atttttcaatttccaatgcact 24869473  T
Q  126 gattacacaaac-tttcataaaaaa 149  Q
     |||||| |||| ||||||||||||    
T  24869474 aattacataaacttttcataaaaaa 24869498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 38047746 - 38047623
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgat 128  Q
    |||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||| || |||| |||||| |||  ||| |||||  ||| || || ||    
T  38047746 ggtcttattaacgagtgtcct-ggggtactctttaagcattctaaattaagtaatttttctttataaatgtcaaaaattttaatttttaatgcactttat 38047648  T
Q  129 tacacaaactttcataaaaaattat 153  Q
    |||||||||||||||| ||| ||||    
T  38047647 tacacaaactttcatataaagttat 38047623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 31844354 - 31844236
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgat 128  Q
    ||||||||||||||||| ||  ||| ||||||||||  || ||||||||||||||| ||  ||||||| || |||||||| |||||||||| || || ||    
T  31844354 ggtcttgttaacgagtgccccaggg-cactctttaaatattctaaattaagtaattattccttaaaaaagtcaaagttttgaatttccaatgcacttcat 31844256  T
Q  129 tacacaaactttcataaaaa 148  Q
    || |||||||||||||||||    
T  31844255 tatacaaactttcataaaaa 31844236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 41960117 - 41959995
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttga 127  Q
    ||||||||||||||||||||   || ||||||||   |||| ||| ||| ||||||| || |||||||||||||||||||| |  ||||||| || || |    
T  41960117 gggtcttgttaacgagtgtctccggagcactctt---gcattctacatttagtaattattctttaaaaatgttaaagttttaagcttccaatgcacttta 41960021  T
Q  128 ttacacaaactttcataaaaaattat 153  Q
    ||| ||||||||||||||||||||||    
T  41960020 ttatacaaactttcataaaaaattat 41959995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 20279698 - 20279597
Alignment:
Q  24 tataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca 123  Q
    |||||||||||||||||| |||| ||  |||||||||||||||||| ||||| |||| |||| || ||| |||| || |||  ||||||||| |||||||    
T  20279698 tataagggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaataca 20279599  T
Q  124 tt 125  Q
    ||    
T  20279598 tt 20279597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 20522943 - 20523032
Alignment:
Q  60 ctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaa 149  Q
    |||||||||| |||| |||||||||| || ||| ||||| | |||||||||||||| |||| || | |||||| ||||||||||||||||    
T  20522943 ctttaagcatgctaagttaagtaattattctttcaaaatttaaaagttttcaattttcaatgcactaattacataaactttcataaaaaa 20523032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 21066325 - 21066224
Alignment:
Q  24 tataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca 123  Q
    |||||||||||||||||| |||| ||  |||||||||||||||||| ||||| |||| |||| || ||| |||| || |||  ||||||||| |||||||    
T  21066325 tataagggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaataca 21066226  T
Q  124 tt 125  Q
    ||    
T  21066225 tt 21066224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 38019556 - 38019439
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||||||||||||||||||||| |     || ||||||||||||| |||||||||| |||| || ||||||| | |||||||||||||| || ||| ||     
T  38019556 ataagggtcttgttaacgagtgcca----gggactctttaagcatgctaaattaagaaattattctttaaaatttttaaagttttcaatctctaatgca- 38019462  T
Q  125 tgattacacaaactttcataaaa 147  Q
     ||||||||| ||||||||||||    
T  38019461 cgattacacatactttcataaaa 38019439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 31264964 - 31265084
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||||||||||||||||| || || |||||||||||||||| |||||||| | | || || |||||||| || |||   |||||||||||||  ||| |    
T  31264964 agggtcttgttaacgagtgcccctgtggcactctttaagcatgctaaattaggaagttattctttaaaaaagtcaaacaattcaatttccaatgtattaa 31265063  T
Q  128 ttacacaaactttcataaaaa 148  Q
     |||||||  |||||||||||    
T  31265064 atacacaagttttcataaaaa 31265084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 43841043 - 43841123
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||||||||||||| || ||||||||| ||||| ||||||||||  |||| |||||||||||||| ||| | |||||||||    
T  43841043 taaattaagtaattattctttaaaaatattaaatttttcaatttttaatatattgattacacaaatttttacaaaaaatta 43841123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 152
Target Start/End: Complemental strand, 30158172 - 30158077
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    ||||||||||||| ||||||||| ||||| || ||| ||||||| |||||||| ||||||||||  ||  ||| || ||||||| |||||||||||    
T  30158172 actctttaagcattctaaattaaataattattctttgaaaatgtaaaagtttttaatttccaatgtataaattgcataaacttttataaaaaatta 30158077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 39691252 - 39691129
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgat 128  Q
    |||| ||||||||||||| ||| | | |||||||||||||| | | |||||  |||| || |||||||| || |||   |||||||| |||| ||||||     
T  39691252 gggttttgttaacgagtgccctcgagacactctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaa 39691153  T
Q  129 tacacaaactttcataaaaaatta 152  Q
    |||||||| |||||||||||||||    
T  39691152 tacacaaattttcataaaaaatta 39691129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 37564468 - 37564352
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    |||||||||||||||| |  |||| |||||||||| ||| |||||||||| |||| || |||||||| || |||   |||||||||||||  ||| | ||    
T  37564468 gtcttgttaacgagtgcctctgggacactctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaata 37564369  T
Q  131 cacaaactttcataaaa 147  Q
    |||||  ||||||||||    
T  37564368 cacaagttttcataaaa 37564352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 2376838 - 2376747
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||||||  |||||||| ||||| || ||||||||| | ||||||||||||||| ||   ||| |||| | |||||||||||||||    
T  2376838 actctttaagcattttaaattaaataattattctttaaaaatatcaaagttttcaatttctaacgtattaattatataaactttcataaaaa 2376747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 36348627 - 36348524
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgat 128  Q
    ||||||||||||||| ||||   |||||||| |||||||| |||||| |||| |||| || |||||||| ||||||  |||  |||| |||| |||||||    
T  36348627 gggtcttgttaacgaatgtctccggggcactttttaagcacactaaaataagcaattattctttaaaaaagttaaacattttgattttcaatgcattgat 36348528  T
Q  129 taca 132  Q
    ||||    
T  36348527 taca 36348524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 37449551 - 37449626
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    |||||||||||||| || ||| ||||||| ||| |||||||||| ||||||| | ||||| | |||||||||||||    
T  37449551 taaattaagtaattatttttttaaaatgtcaaacttttcaattttcaatacactaattacgctaactttcataaaa 37449626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 5687256 - 5687314
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    |||||||||||||||||||||||  ||  ||||||||||||||  ||||||||||||||    
T  5687256 aagggtcttgttaacgagtgtccccggtacactctttaagcattgtaaattaagtaatt 5687314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 36907841 - 36907887
Alignment:
Q  102 aaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||||||| || |||||||||||||||| |||||||    
T  36907841 aaagttttcaatttccaatgcaatgattacacaaacttttataaaaa 36907887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 1445268 - 1445160
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgatta 130  Q
    ||||||||||||||||| | ||  |||||||||||| | ||||||||||||||   | ||||| ||||| ||||| |||||||| |||| || || ||||    
T  1445268 tcttgttaacgagtgtc-tcggatcactctttaagctttctaaattaagtaatatctctttaataatgtcaaagtgttcaattttcaatgcactttatta 1445170  T
Q  131 cacaaacttt 140  Q
    ||||||||||    
T  1445169 cacaaacttt 1445160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 4278957 - 4279021
Alignment:
Q  77 taagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttca 142  Q
    ||||||||| || | |||||||| |||||||||||||||||||||||   ||||||||||||||||    
T  4278957 taagtaattattttataaaaatgataaagttttcaatttccaataca-ccattacacaaactttca 4279021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 35501179 - 35501086
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    |||||||||| ||| ||| ||| |||||||  | ||| ||||| |||||||||| |||||||||| || || |||||||||||||| |||||||    
T  35501179 cactctttaaacattctacatttagtaattaatctttgaaaatattaaagtttttaatttccaatgcactttattacacaaacttttataaaaa 35501086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 39093049 - 39093094
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatac 71  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  39093049 taagggtcttgttaacgagtgtccccggggtactctttaagcatac 39093094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 44254269 - 44254228
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  44254269 ataagggtcttgttaacgagtgtcctaagggcactctttaag 44254228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 44907218 - 44907306
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaa-gttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||| | ||||||||||||||| || ||||||||||| |||  |||||||||| |||| || | || |||| ||||||||||||||    
T  44907218 tttaagctttctaaattaagtaattattttttaaaaatgtcaaactttttcaattttcaatgcactaataacactaactttcataaaaa 44907306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 7528360 - 7528260
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattac 131  Q
    |||||||||||||||||| ||   |||| |||||||||  |||| ||||||||| || ||||  || || |||  |||| ||||||||||||||||||||    
T  7528360 tcttgttaacgagtgtccgtga--cactttttaagcattttaaaataagtaattattctttacgaaagtcaaatatttcgatttccaatacattgattac 7528263  T
Q  132 aca 134  Q
    |||    
T  7528262 aca 7528260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 30486574 - 30486697
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    ||||||||||  ||||||||||    ||| |||| |||||| ||  ||||| |||||||| || ||| ||||| | |||||||| |||||  ||| || |    
T  30486574 taagggtcttcataacgagtgtttccgggacactttttaagtatgttaaataaagtaattattcttttaaaatttaaaagtttttaatttataatgcact 30486673  T
Q  126 gattacacaaactttcataaaaaa 149  Q
    ||||||||||||||| ||||||||    
T  30486674 gattacacaaacttttataaaaaa 30486697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 7513431 - 7513330
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    ||||||||||||||||| |  |||||||||||||||||||  |||  ||| |||| || |||| |||  |||||  |||| |||| |||| |||||||||    
T  7513431 gtcttgttaacgagtgttcccggggcactctttaagcatatcaaaacaagcaattattctttagaaaaattaaacatttcgattttcaatgcattgatta 7513332  T
Q  131 ca 132  Q
    ||    
T  7513331 ca 7513330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 12782743 - 12782836
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    ||||||||||||||||| ||||   ||  |||||||||||||||||||| || | |||| || |||||||| ||| ||  |||| |||||||||    
T  12782743 aagggtcttgttaacgaatgtctccggaacactctttaagcatactaaaatatgcaattattctttaaaaaagttgaatatttcgatttccaat 12782836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 39644269 - 39644232
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  39644269 tcttgttaacgagtgtctttggagcactctttaagcat 39644232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 42636505 - 42636436
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaa 97  Q
    ||||||||||||| |||||  |  |||||||||||||||||| | ||||| ||||||| ||||| |||||    
T  42636505 agggtcttgttaaggagtgctcccggggcactctttaagcatcccaaatttagtaattattattcaaaaa 42636436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 9629925 - 9629838
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagtttt-caatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||| | |||| |||||||||| || ||||||||||| ||| |||| |||||| |||| |||||||||||  || |||||||||||    
T  9629925 tttaagctttctaatttaagtaattatt-tttaaaaatgtaaaactttttcaattttcaatgcattgattacattaattttcataaaaa 9629838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 20142580 - 20142540
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    |||||||||||||||||||||||||  || |||||||||||    
T  20142580 taagggtcttgttaacgagtgtcctaaggacactctttaag 20142540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 34336611 - 34336500
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    |||||||||||||||| || ||||  | ||||||||||| || || ||| ||| |||| || |||||||| || |||   ||||||||||||| ||||||    
T  34336611 agggtcttgttaacgattgcccttatg-cactctttaaggattcttaataaagaaattattctttaaaaaagtcaaaaacttcaatttccaatgcattga 34336513  T
Q  128 ttacacaaacttt 140  Q
    || || |||||||    
T  34336512 tttcataaacttt 34336500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 37231476 - 37231440
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaa 65  Q
    |||||||||||||||||| |||| |||||||||||||    
T  37231476 gggtcttgttaacgagtgcccttagggcactctttaa 37231440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 37426387 - 37426427
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    |||||||||||||||||| || |||| ||||||||||||||    
T  37426387 gggtcttgttaacgagtgcccctgggacactctttaagcat 37426427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 13445871 - 13445746
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||||||||||||||||||||||  || ||||||||||||||| ||||||||||||| | || ||||||||||| ||||||||||||||| ||  || |     
T  13445871 aagggtcttgttaacgagtgtccccggtgcactctttaagcatgctaaattaagtaagtattctttaaaaatgtgaaagttttcaatttcaaaagcacta 13445772  T
Q  127 attacacaaactttcataaaaaatta 152  Q
    || |||||||||||||||||||||||    
T  13445771 atcacacaaactttcataaaaaatta 13445746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 5704693 - 5704577
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    |||||||||| ||||||| | |  ||||||||||| ||| ||||||||||||||| || ||| ||||||||  |||||||||||| ||||  ||||||||    
T  5704693 gtcttgttaatgagtgtcttcgaagcactctttaaacatgctaaattaagtaattatttttttaaaatgtt--agttttcaattttcaatgtattgatta 5704596  T
Q  131 cacaaactttcataaaaaa 149  Q
    || ||||||||||||||||    
T  5704595 cataaactttcataaaaaa 5704577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 29716876 - 29716784
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaa 147  Q
    |||| ||||||||| ||||||| || |||| || ||| ||||||| ||||||||||||||||||| || || |||||||||||||||||||||    
T  29716876 cactttttaagcattctaaattcagcaattatttttttaaaatgtcaaagttttcaatttccaatgcactttattacacaaactttcataaaa 29716784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 10364754 - 10364830
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||||||| || ||||||||| | |||||||||||||| |||| || |||||| || ||||||||||||||    
T  10364754 taaattaagtaattattctttaaaaatatcaaagttttcaatttacaatgcactgattatacgaactttcataaaaa 10364830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 23344568 - 23344659
Alignment:
Q  58 ctctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    |||||||||| | ||||||||||||||  || |||| |||||| ||||| ||||||||||||| || || |||||||||||||| |||||||    
T  23344568 ctctttaagctttctaaattaagtaatatttctttacaaatgtcaaagtgttcaatttccaatgcactttattacacaaacttttataaaaa 23344659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 3753229 - 3753114
Alignment:
Q  33 cttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatac-attgattac 131  Q
    ||||||||| |||| || || | ||||||||||||||  ||||| |||||||| || ||| ||||| | |||||||||||||| |||| | | || ||||    
T  3753229 cttgttaacaagtgcccctgtgccactctttaagcatgataaataaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatggttac 3753130  T
Q  132 acaaactttcataaaa 147  Q
    ||||||||| ||||||    
T  3753129 acaaacttttataaaa 3753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 3769452 - 3769337
Alignment:
Q  33 cttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatac-attgattac 131  Q
    ||||||||| |||| || || | ||||||||||||||  ||| | |||||||| || ||| ||||| | |||||||||||||| |||| | | |||||||    
T  3769452 cttgttaacaagtgcccctgtgccactctttaagcatgataattaaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatgattac 3769353  T
Q  132 acaaactttcataaaa 147  Q
    ||||||||| ||||||    
T  3769352 acaaacttttataaaa 3769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 6586556 - 6586506
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaatta 78  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||    
T  6586556 aagggtcttgttaacgattgccct-ggggcactctttaagcatactaaatta 6586506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 34552400 - 34552341
Alignment:
Q  90 tttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaa 149  Q
    ||||||||| ||||||||||||||||||||| || || ||||||| |||||||||||||||    
T  34552400 tttaaaaatattaaagttttcaatttccaatgcactttattacac-aactttcataaaaaa 34552341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 5446811 - 5446744
Alignment:
Q  18 tattattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    ||||||| ||||||||||||||||||||||||  ||| |||| | ||||||| ||||| | |||||||    
T  5446811 tattattttaagggtcttgttaacgagtgtcccagggacactttgtaagcattctaaaattagtaatt 5446744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 19293592 - 19293517
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaa 103  Q
    |||||||| ||||||||||| || ||| |||||||||||||| ||||||| |  |||| |||||| |||| |||||    
T  19293592 agggtcttattaacgagtgttctcgggacactctttaagcatcctaaatttaacaattattattttaaaaagttaa 19293517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 27752613 - 27752700
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaattt 115  Q
    |||||||| ||||| ||||||   | || ||||||||| ||| ||||||||||||||| || | || |||||| ||||||||||||||    
T  27752613 agggtcttattaacaagtgtctccgaggtactctttaaacattctaaattaagtaattattttatacaaatgtcaaagttttcaattt 27752700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 30509284 - 30509387
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgat 128  Q
    ||||||||||||||||||||   ||  |||||||||||||||| ||| |||| |||| || ||||||||  | |||  |||| |||| |||| |||||||    
T  30509284 gggtcttgttaacgagtgtctccggaacactctttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgat 30509383  T
Q  129 taca 132  Q
    ||||    
T  30509384 taca 30509387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 30739572 - 30739623
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    ||||||||||||||| | ||||||||||||||| || ||||||| |||||||    
T  30739572 ttgttaacgagtgtcttcggggcactctttaagtattctaaatttagtaatt 30739623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 10429739 - 10429814
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||| |||||||| || ||||||| |||| || |||||||||| || | || |||||||| |||||||||||||||    
T  10429739 taaatcaagtaattattttttaaaa-tgtttaacttttcaattttcagtgcaatgattacataaactttcataaaaa 10429814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 24389765 - 24389645
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    ||||||||||||||||| ||| |||  |||||||||||||||||| ||||||||||||||| || ||| || |||| ||||||||||||||||||| |      
T  24389765 ataagggtcttgttaacaagtatccacggggcactctttaagcatgctaaattaagtaattattcttttaagatgtcaaagttttcaatttccaatgcgc 24389666  T
Q  125 tgattacacaaactttcataa 145  Q
    |||||||||||||||||||||    
T  24389665 tgattacacaaactttcataa 24389645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 12848607 - 12848491
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    ||||||||||| ||||| |  ||||||||||||||||||| |||||||||||| | || ||||| ||||| ||||||||||||||||| | || | ||||    
T  12848607 gtcttgttaacaagtgttcc-ggggcactctttaagcatattaaattaagtaactattctttaataatgtcaaagttttcaatttccattgcactaatta 12848509  T
Q  131 cacaaactttcataaaaa 148  Q
    ||||||||||||||||||    
T  12848508 cacaaactttcataaaaa 12848491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 2826097 - 2825989
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||| |||| |||| || |||||||| || |||  |||| ||||||||| ||||    
T  2826097 taagggtcttgttaacgagtgtccctgtggtactctttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcatt 2825998  T
Q  126 gattacaca 134  Q
    |||||||||    
T  2825997 gattacaca 2825989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 6334805 - 6334686
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacac 133  Q
    ||||||||||||||||| ||  |||||||||| ||| |||||||||  |||| || ||||||||||| ||||||||||||||||||| ||||||||| |     
T  6334805 ttgttaacgagtgtcctcggaacactctttaaacatgctaaattaaaaaattattttttaaaaatgtcaaagttttcaatttccaatgcattgattatat 6334706  T
Q  134 aaactttcataaaaaattat 153  Q
    |||||||  |||||| ||||    
T  6334705 aaacttttgtaaaaagttat 6334686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 25626947 - 25627034
Alignment:
Q  60 ctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaa 147  Q
    ||||||| || ||||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  25626947 ctttaagtattctaaattaaataattattctttaaaaattttaaagttttcgatttccaatacattgattacaccaactttcataaaa 25627034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 33454964 - 33455055
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||| |||||||||| || | || ||||||||||| |||||||||||||| |||||||||||||||||||  |||||||||||    
T  33454964 actctttaagcatgctaaattaagaaactattctttaaaaatgtcaaagttttcaatttacaatacattgattacacaacttttcataaaaa 33455055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 565833 - 565711
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgt--tatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||||||||||||||||||||||  | |  ||||||||||||| |||||||||||||  ||  | ||||||||||| |||||||||||||||| || ||     
T  565833 aagggtcttgttaacgagtgtccc-gagatactctttaagcatgctaaattaagtaaaagtattctttaaaaatgtgaaagttttcaatttcctatgcac 565735  T
Q  125 tgattacacaaactttcataaaaa 148  Q
    | ||||||||||||||||||||||    
T  565734 taattacacaaactttcataaaaa 565711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 8964386 - 8964477
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaa 146  Q
    ||||| ||||||||| ||||||||||||||| || |||||||| || |||  |||||||||||||| ||||||||||||||| |||||||||    
T  8964386 gcactgtttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaa 8964477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 431782 - 431652
Alignment:
Q  19 attattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttcca 118  Q
    |||||| |||| |||||||||||||||| ||   ||  |||||||||  || ||| ||||||||||| || ||||||||||||||| |||||||||||||    
T  431782 attattttaagcgtcttgttaacgagtgcccccaggatactctttaaatattctatattaagtaattattctttaaaaatgttaaaattttcaatttcca 431683  T
Q  119 ataca-ttgattacacaaactttcataaaaa 148  Q
    || || ||  |||||||||||||||||||||    
T  431682 atgcacttttttacacaaactttcataaaaa 431652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 6084014 - 6083916
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||| | |||||||||||||| ||||    |||||||||||||||| ||||||| ||||    
T  6084014 gcactctttaagcatactaaatttagtaattattattttaaaatatcaaagttttcaattttcaatgtgctgattacacaaacttttataaaaagttat 6083916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 30869700 - 30869593
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||| |||||||||||||||||    ||||||||||||||||| ||||||||| |  || || ||||||||||||||||||||||||||| |||||| ||    
T  30869700 aaggatcttgttaacgagtgtctccagggcactctttaagcatgctaaattaaat--ttattctttaaaaatgttaaagttttcaatttctaatacactg 30869603  T
Q  127 attacacaaa 136  Q
    || |||||||    
T  30869602 ataacacaaa 30869593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 3666533 - 3666452
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||||||||||| || ||||||||| ||||| |||| ||||  |||||||||||||||| ||||||||||||||||||||    
T  3666533 taaattaagtaattattctttaaaaatattaaaatttttaattctcaatacattgattacataaactttcataaaaaattat 3666452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 33068639 - 33068562
Alignment:
Q  71 ctaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||| ||| || |||||| |||||||||||||||||    
T  33068639 ctaaattaagtaattattttttaaaaatgtgaaagttttcaatttctaatgcactgattatacaaactttcataaaaa 33068562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 3882583 - 3882698
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||| |||| |||| || |||||||| || |||  ||||  ||| |||| ||||||    
T  3882583 agggtcttgttaacgagtgccctcggggcactctttaagcattctaaaataagcaattattctttaaaaaggtcaaatatttcggttttcaatgcattga 3882682  T
Q  128 ttacacaaactttcat 143  Q
    ||||||| | ||||||    
T  3882683 ttacacacattttcat 3882698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 12762981 - 12762896
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttca 142  Q
    |||||||||||||   ||||||||||||| || || |||||||||||| ||||||||||||||| || || |||||||||||||||    
T  12762981 actctttaagcatttaaaattaagtaattattcttaaaaaatgttaaaattttcaatttccaatgcactgtttacacaaactttca 12762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 9049256 - 9049164
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||||||  |||||||||||||| || ||| ||||||||||| |||||||||| |||| |||| |||||||||| ||| ||||||| ||||    
T  9049256 tttaagcatgttaaattaagtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaatttttataaaaagttat 9049164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 4655100 - 4654979
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    ||||||||||||||| |||||||  |  | |||||||||||||| ||||||||  ||||| || ||| ||||| | |||||||||||||| |||| ||      
T  4655100 taagggtcttgttaatgagtgtc--tcagacactctttaagcatgctaaattagataattatttttttaaaatatcaaagttttcaattttcaatgcacc 4655003  T
Q  126 gattacacaaactttcataaaaaa 149  Q
    |||||||||||||||  |||||||    
T  4655002 gattacacaaacttttgtaaaaaa 4654979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 30523014 - 30523090
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||| ||||| || ||||| ||||| |||||||||||||||||||  | | ||||||||||||||||||||||    
T  30523014 taaattaaataatttttctttaacaatgtcaaagttttcaatttccaatgtactaattacacaaactttcataaaaa 30523090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 30822857 - 30822767
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    |||||||||||||||||||  | || |||||||| |||| |  |||||||||||||| || ||| ||||||| |||||||||||||||||||    
T  30822857 gggtcttgttaacgagtgtt-tcggagcactcttaaagctttttaaattaagtaattattttttgaaaatgtcaaagttttcaatttccaat 30822767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 37285023 - 37284904
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    |||||||| |||||||||| || |  ||||||||||  ||  |||||||||||||| || ||||||||| ||||| |||||||||| |||| || | |||    
T  37285023 ggtcttgtcaacgagtgtctttagaacactctttaaatattttaaattaagtaattattttttaaaaatcttaaatttttcaattttcaatgcaataatt 37284924  T
Q  130 acacaaactttcataaaaaa 149  Q
    || |||||||  ||||||||    
T  37284923 acgcaaacttctataaaaaa 37284904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 6411486 - 6411388
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||| ||||| ||| |||||| |||||||| || ||| ||||| | |||||||||||||||||||  | |||||||||| ||||| ||||||| ||||    
T  6411486 gcactttttaaacatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgtactgattacacatacttttataaaaagttat 6411388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 2796627 - 2796532
Alignment:
Q  58 ctctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta-tatt 156  Q
    ||||||||||||||||||| |||||||| || |||||||         |||||||||| ||||| | |||||||||||||||| ||||||||||| ||||    
T  2796627 ctctttaagcatactaaataaagtaattattttttaaaa---------ttttcaattttcaatatactgattacacaaacttttataaaaaattactatt 2796537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 13538363 - 13538483
Alignment:
Q  29 gggtcttgttaacgagtgtccttg-gggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    |||||||||||||||||| ||  | ||||||||||||||||||||||||||   |||| || ||||||||  | |||   ||||||||||||| ||||||    
T  13538363 gggtcttgttaacgagtgcccccgagggcactctttaagcatactaaattagaaaattattctttaaaaaattcaaataattcaatttccaatgcattga 13538462  T
Q  128 ttacacaaactttcataaaaa 148  Q
     |||| ||  |||||||||||    
T  13538463 atacataacttttcataaaaa 13538483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 15816844 - 15816788
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaa 83  Q
    |||||||||||||||||||| ||   |||||||||||||||||||||||| ||||||    
T  15816844 aagggtcttgttaacgagtgcccccagggcactctttaagcatactaaataaagtaa 15816788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 36480369 - 36480417
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaatta 78  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  36480369 ggtcttgttaacgagtgtcctcgggacactctttaagcattctaaatta 36480417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 37313811 - 37313687
Alignment:
Q  23 ttataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatac 122  Q
    |||||||||||||||||||||||||| | | |  ||| |||||||||  |||||||||||||| || ||||||||  | ||| |||| |||||  ||| |    
T  37313811 ttataagggtcttgttaacgagtgtcttcgag--actttttaagcattttaaattaagtaatttttctttaaaaaaatcaaaatttttaatttgtaatgc 37313714  T
Q  123 attgattacacaaactttcataaaaaa 149  Q
    | | |||||||||||||| | ||||||    
T  37313713 actaattacacaaactttaaaaaaaaa 37313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 39647884 - 39647789
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatt 151  Q
    |||||||||| ||| ||||||||||||||| || ||||||||| ||||   |||  |||||||| || |||||| |||||| ||| ||||||||||    
T  39647884 cactctttaaacattctaaattaagtaattattttttaaaaatattaagacttttgatttccaaaacgttgattgcacaaaattttataaaaaatt 39647789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 15806105 - 15806059
Alignment:
Q  102 aaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||||    
T  15806105 aaagttttcaattttcaatgcattgattacacaaacttttataaaaa 15806059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 31513701 - 31513825
Alignment:
Q  9 taaattaggtattattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatt-taaaaatgttaaagtt 107  Q
    |||||||  |||||||  ||||||||||||| ||||||||   |||||||||||||||| | ||||| |||| |||| || || ||||||| |||||  |    
T  31513701 taaattatttattatttaaagggtcttgttagcgagtgtctccggggcactctttaagctttctaaaataag-aattatttttataaaaat-ttaaatgt 31513798  T
Q  108 ttcaatttccaatacattgattacaca 134  Q
    ||| ||||||||| |||||||||||||    
T  31513799 ttcgatttccaatgcattgattacaca 31513825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 40874781 - 40874863
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagtttt 109  Q
    |||||| |||||||||||| |||  ||| |||||||||| | |  |||||||||||||| || ||||||||||||||| ||||    
T  40874781 aagggttttgttaacgagtatccacgggacactctttaaactttttaaattaagtaattattttttaaaaatgttaaactttt 40874863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 44838626 - 44838704
Alignment:
Q  71 ctaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaa 149  Q
    |||||| |||||||| || ||| ||||| | |||   |||||||| |||||||||||||||||||||||| ||||||||    
T  44838626 ctaaataaagtaattattcttttaaaatttaaaaaaattcaattttcaatacattgattacacaaacttttataaaaaa 44838704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 3074071 - 3074152
Alignment:
Q  52 ggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaag-ttttcaatttccaatacattgattaca 132  Q
    ||||||||||||||||||  |||||||||||||| ||  || ||||| | |||| ||||||||||||||| || ||||||||    
T  3074071 ggggcactctttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattaca 3074152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 32859752 - 32859873
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||||||||||||||||| ||   ||||||||||||| ||| |||||||| | | || || |||||||| || |||   |||||||||||||  ||| |    
T  32859752 agggtcttgttaacgagtgcccccagggcactctttaaacatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaa 32859851  T
Q  128 ttacacaaactttcataaaaaa 149  Q
     |||||||  ||||||||||||    
T  32859852 atacacaagttttcataaaaaa 32859873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 33634934 - 33634845
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    ||||||||||||||||  |||| | ||||||||||| ||  |||||||| ||||| ||  || ||||| | |||||||||||||||||||    
T  33634934 gtcttgttaacgagtgcacttgagacactctttaaggatgttaaattaaataattattcgtttaaaatatgaaagttttcaatttccaat 33634845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 33276004 - 33275909
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||||||||||||| |||||  ||| |||| || |||||||| ||||||  ||||||||| |||||||| || |||||| | ||||||||| |||||    
T  33276004 cactctttaagcattctaaaacaagaaattattttttaaaaaagttaaatatttcaattttcaatacataga-tacacacattttcataaacaatta 33275909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 43678625 - 43678565
Alignment:
Q  93 aaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||| |||||||||||||||| ||||  ||| |||||||||||||| | ||||||||||    
T  43678625 aaaaatattaaagttttcaattttcaatgtattaattacacaaacttttaaaaaaaattat 43678565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 11385447 - 11385590
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaattata 154  Q
    ||||||||||  || |||||| |||||||| || ||||||| | | ||| ||||| |||||||||||| || || ||||||||||| ||||||| ||||     
T  11385447 cactctttaaatattctaaatcaagtaattattctttaaaattatcaaatttttctatttccaatacactttataacacaaacttttataaaaagttatc 11385546  T
Q  155 ttttataat-ctttgtcaatgtcttagagacacttgttaacatt 197  Q
     |||| ||| |||  |||||||||  ||| |||| |||||||||    
T  11385547 atttaaaatccttaatcaatgtctcggaggcactagttaacatt 11385590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 43745590 - 43745629
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  43745590 aagggtcttgttaacgagtgcccttagggcactctttaag 43745629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 1335024 - 1334954
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaa 97  Q
    ||||||||||||||||||| ||   |||||||||||||||||| | ||||| | ||||| || ||||||||    
T  1335024 aagggtcttgttaacgagtatctccggggcactctttaagcatcccaaatttaataattattctttaaaaa 1334954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 18223081 - 18223183
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||| ||||||||||||||| | ||| |||| ||||||||||| |||  ||| |||| || ||||||||  |  ||  |||||||||||||| ||||||    
T  18223081 agggttttgttaacgagtgtcttcgggacactttttaagcataccaaaacaagcaattattctttaaaaaaatagaatatttcaatttccaatgcattga 18223180  T
Q  128 tta 130  Q
    |||    
T  18223181 tta 18223183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 29685840 - 29685718
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    |||||||||||||||| |   || ||||||||||| ||| |||||| |||||||| || ||| ||||| | |||||| ||||||| |||  ||  |||||    
T  29685840 gtcttgttaacgagtgcctccggagcactctttaaacatgctaaataaagtaattattctttcaaaatttaaaagttctcaattttcaacgcaccgatta 29685741  T
Q  131 cacaaactttcataaaaaattat 153  Q
    |||||| |||  |||||| ||||    
T  29685740 cacaaatttttgtaaaaagttat 29685718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 45076264 - 45076191
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaa 104  Q
    |||||| |||||||||||||  | |||||||||||| ||||||||| |||| |||| || |||||||| ||||||    
T  45076264 ggtcttattaacgagtgtccc-gaggcactctttaaacatactaaaataagcaattattctttaaaaaagttaaa 45076191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 11945009 - 11944892
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    ||||||||||||||||| |  | | ||||||||||| || |||| || ||||||| || || |||||||| ||   || |||||| |||| |||||| ||    
T  11945009 gtcttgttaacgagtgttccagagacactctttaaggatcctaattttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaata 11944910  T
Q  131 cacaaactttcataaaaa 148  Q
    |||||  |||||||||||    
T  11944909 cacaacttttcataaaaa 11944892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 42342581 - 42342509
Alignment:
Q  75 attaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||| ||||| || ||||||||||| ||| ||||||||||  |||||| |||||| ||||| |||||||||||    
T  42342581 attaaataattattctttaaaaatgtcaaaattttcaattt-taatacactgattaaacaaattttcataaaaa 42342509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 5403503 - 5403543
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  5403503 taagggtcttgttaacgagtgcccttagggaactctttaag 5403543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 18684327 - 18684454
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactcttt--aagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    |||||||||||||||||||  || ||| ||||||||  |||||| |||||||| | | || || |||||||| || | |   |||||||||||||  |||    
T  18684327 agggtcttgttaacgagtgctctcgggacactcttttaaagcatgctaaattaggaagttattctttaaaaaagtcatacaattcaatttccaatgtatt 18684426  T
Q  126 gattacacaaactttcataaaaaattat 153  Q
     | |||||||| ||||||||||| ||||    
T  18684427 aaatacacaaattttcataaaaagttat 18684454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 32066756 - 32066820
Alignment:
Q  95 aaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattatatttta 159  Q
    |||||| |||||||| |||||| |||  | | |||||||||||||||||||||| ||||| ||||    
T  32066756 aaatgtcaaagtttttaatttctaatgtactaattacacaaactttcataaaaagttataattta 32066820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 45757894 - 45758017
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    |||||||||||||||||||||||   ||  ||||||||||||||  ||||||||| |||| || ||||||||||| |||||||||||||| |||| || |    
T  45757894 taagggtcttgttaacgagtgtctccggatcactctttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcact 45757993  T
Q  126 gattacacaaactttcataaaaaa 149  Q
    ||||||||||||||||||||||||    
T  45757994 gattacacaaactttcataaaaaa 45758017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 54911158 - 54911288
Alignment:
Q  18 tattattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttcc 117  Q
    ||||||||  ||||| |||||||| ||||  ||||||||| ||||||| ||| ||||||||| ||||| || ||| |||||||||||||||| ||||| |    
T  54911158 tattattagtagggtgttgttaacaagtgatcttggggcaatctttaaacattctaaattaaataattattcttttaaaatgttaaagttttaaattttc 54911257  T
Q  118 aatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| |||||||||||||||    
T  54911258 aatacattgattacataaactttcataaaaa 54911288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 3027127 - 3027003
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca- 123  Q
    |||||||||||||||||||||| |   || ||||||||||||||| ||||||||||||||| |||||||||||| | |||| ||||| |||||||| ||     
T  3027127 ataagggtcttgttaacgagtgcctccggagcactctttaagcattctaaattaagtaatttttatttaaaaatatcaaaggtttcattttccaatgcac 3027028  T
Q  124 ttgattacacaaactttcataaaaa 148  Q
    || | ||||||||||||||||||||    
T  3027027 ttcactacacaaactttcataaaaa 3027003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 29611987 - 29612106
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttg 126  Q
    ||||||||||||||||||| ||  ||| |||||||||| ||| ||||| ||||||||| || ||||||||||| | ||||||||||||||||| || ||     
T  29611987 agggtcttgttaacgagtgcccccgggacactctttaaacattctaaaataagtaattattctttaaaaatgtgacagttttcaatttccaatgcacttt 29612086  T
Q  127 attacacaaactttcataaa 146  Q
    ||||||||||||||||||||    
T  29612087 attacacaaactttcataaa 29612106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 24313522 - 24313644
Alignment:
Q  32 tcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgatta 130  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||||  |||| || ||||||||||| |||||||||||||| |||| || || | ||    
T  24313522 tcttgttaacgagtgtcctcggggcactctttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcattttacta 24313621  T
Q  131 cacaaactttcataaaaaattat 153  Q
    |||||| ||||||||||| ||||    
T  24313622 cacaaattttcataaaaagttat 24313644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 48551004 - 48551127
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||||||| ||||||||||||||||   | ||||||||||||||| |||||||||| |||| || ||||||||||| |||||||||||||| |||| ||     
T  48551004 ataagggtgttgttaacgagtgtccccagagcactctttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatgcac 48551103  T
Q  125 tgattacacaaactttcataaaaa 148  Q
     ||||||||||  ||| |||||||    
T  48551104 cgattacacaattttttataaaaa 48551127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 25317771 - 25317892
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||||||||||||||||| | |   ||| ||||||| |||||| |||||| |||||||| || ||| ||||| | ||||||||||||||||||| ||| |    
T  25317771 aagggtcttgttaacgagcgcctccgggacactcttcaagcatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgcatcg 25317870  T
Q  127 attacacaaactttcataaaaa 148  Q
    |||||||||||||| |||||||    
T  25317871 attacacaaacttttataaaaa 25317892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 28692056 - 28691951
Alignment:
Q  35 tgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacaca 134  Q
    ||||| ||| ||| |||| | |||||||||| |||| |||||||||||||| || ||| ||||||||||||||||||||||| |||||| | ||||||||    
T  28692056 tgttatcgattgttcttgtgacactctttaaacatattaaattaagtaattattcttttaaaatgttaaagttttcaatttctaatacaataattacaca 28691957  T
Q  135 aacttt 140  Q
    ||||||    
T  28691956 aacttt 28691951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 46725622 - 46725733
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-t 124  Q
    |||||||||| |||||||||||||  |||  ||||||||||||| |||||||||||| || || | ||||||||||||| |||||||||| |||| || |    
T  46725622 taagggtcttattaacgagtgtccacgggatactctttaagcattctaaattaagtagttattttataaaaatgttaaaattttcaattttcaatgcact 46725721  T
Q  125 tgattacacaaa 136  Q
    | ||||||||||    
T  46725722 ttattacacaaa 46725733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 48322346 - 48322241
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    |||||||||||||||||||| | |  |||| ||||||||||||| ||||| ||||||||| || ||| |||| || |||  |||| ||||||||||||||    
T  48322346 taagggtcttgttaacgagtattca-ggggtactctttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacatt 48322248  T
Q  126 gattaca 132  Q
    |||||||    
T  48322247 gattaca 48322241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 53040434 - 53040556
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    ||||||||||| ||||||||   || | | ||||||||||| || |||||||||| |||| |||||||||||  | |||   |||||||||||||  |||    
T  53040434 taagggtcttgctaacgagtactctcgtgacactctttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtatt 53040533  T
Q  126 gattacacaaactttcataaaaa 148  Q
    || ||||||||||||||||||||    
T  53040534 gaatacacaaactttcataaaaa 53040556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 20821303 - 20821391
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    ||||| ||| ||||| ||||||||| || ||||||||| |||||| ||| |||||||||| || || ||||||||||||||||||||||    
T  20821303 tttaaacattctaaactaagtaattattctttaaaaatattaaaggttttaatttccaatgcactttattacacaaactttcataaaaa 20821391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 37388418 - 37388494
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||||||| || ||||||||||| ||| |||||| ||| |||| ||||||||||||||| ||| |||||||    
T  37388418 taaattaagtaattattctttaaaaatgtgaaatttttcagttttcaatgcattgattacacaaatttttataaaaa 37388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 45584432 - 45584347
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||  |||||||||||||| || ||| ||||| |  ||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  45584432 tttaagcatgttaaattaagtaattattcttttaaaatat--aagtttttaattttcaatatattgattacacaaactttcataaaaa 45584347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 12140145 - 12140224
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaacttt 140  Q
    ||||||||| ||||||||| ||||| || ||| ||||||| |||||||||||||||||||  | |||||| |||||||||    
T  12140145 tttaagcatgctaaattaaataattattcttttaaaatgtcaaagttttcaatttccaatgtactgattatacaaacttt 12140224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 54290918 - 54290796
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    |||||||||||||||||||| |||  ||||||||||||||||||  ||||||| | | || || |||||||| || |||   |||||||||||||  |||    
T  54290918 taagggtcttgttaacgagtatccccggggcactctttaagcatgataaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtatt 54290819  T
Q  126 gattacacaaactttcataaaaa 148  Q
     | |||||||  |||||||||||    
T  54290818 aaatacacaagttttcataaaaa 54290796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 11623611 - 11623490
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttga 127  Q
    ||||||||||||||||||||   |||||||||||||||| |  |||||||||| ||  || ||||| ||||| ||| | ||||||||||| | || ||      
T  11623611 gggtcttgttaacgagtgtctccggggcactctttaagctttttaaattaagtgatatttctttaataatgtcaaaatgttcaatttccattgcacttat 11623512  T
Q  128 ttacacaaactttcataaaaaa 149  Q
    ||||||||||||| ||||||||    
T  11623511 ttacacaaactttaataaaaaa 11623490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 14146110 - 14146187
Alignment:
Q  71 ctaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| || |||  |||||| ||||||||||||||| ||| || |||||||||||||||  |||||||    
T  14146110 ctaaattaagtaattattttttttaaatgtcaaagttttcaatttctaatgcactgattacacaaacttctataaaaa 14146187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 37708400 - 37708508
Alignment:
Q  24 tataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca 123  Q
    |||| ||||||||||||| |||| ||  | ||||||||||||||||| |||| |||| ||||  | |||||||| ||||||  ||||||||| |||| ||    
T  37708400 tataggggtcttgttaacaagtgcccccgaggcactctttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgca 37708499  T
Q  124 ttgattaca 132  Q
     ||||||||    
T  37708500 ctgattaca 37708508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 9342763 - 9342672
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaa 147  Q
    ||||| ||||||| ||| ||||| ||||| ||  ||||||||||||||||||||||||| |||| || || |||||||||| ||| ||||||    
T  9342763 actctataagcattctagattaaataattattcattaaaaatgttaaagttttcaattttcaatgcattttattacacaaatttttataaaa 9342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 33072181 - 33072126
Alignment:
Q  97 atgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||| ||||||||||||||||||| |||| |||||||||| ||| |||||||||||    
T  33072181 atgtcaaagttttcaatttccaatgcattaattacacaaatttttataaaaaatta 33072126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 37359467 - 37359546
Alignment:
Q  62 ttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaacttt 140  Q
    ||||||||  |||||||||||||| ||   |||||||||||||||||||||||| |||| || || ||||||||||||||    
T  37359467 ttaagcattttaaattaagtaattattccataaaaatgttaaagttttcaattttcaattcactttattacacaaacttt 37359546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 40614411 - 40614291
Alignment:
Q  27 aagggtcttgttaacgagtgtcctt-ggggcactctttaagcatactaaattaagtaa----ttgttatttaaaaatgttaaagttttcaatttccaata 121  Q
    |||||||||||||||||||| | |  ||||| |||||||||| | |||||||||||||    || || ||||||||||| || ||||||||||| ||||     
T  40614411 aagggtcttgttaacgagtgccatccggggcgctctttaagcgttctaaattaagtaagtaattattctttaaaaatgtcaatgttttcaattttcaatg 40614312  T
Q  122 ca-ttgattacacaaactttc 141  Q
    || || |||||||||||||||    
T  40614311 cactttattacacaaactttc 40614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 4305278 - 4305232
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaatt 77  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||    
T  4305278 gtcttgttaacgagtgcccctggggcactctttaaggatactaaatt 4305232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 45557094 - 45557162
Alignment:
Q  84 ttgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||| || |||||||||||| |||| ||||| |||||||||||||| ||| ||||||||||||| ||||    
T  45557094 ttgtttttaaaaaatgttaaattttt-aattttcaatacattgattatacacactttcataaaaatttat 45557162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 50604022 - 50604087
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaa 95  Q
    |||||||||||||||||||    ||||||||||||| ||| ||||||||||||||| || ||||||    
T  50604022 ggtcttgttaacgagtgtctccagggcactctttaaccattctaaattaagtaattattctttaaa 50604087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 50644129 - 50644213
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt-gattacacaaacttt 140  Q
    ||||||||||| ||| ||||||||||| || || ||||||||||| ||| |||| ||||| ||||||||| |||| ||||||||||    
T  50644129 cactctttaagtatattaaattaagtagttattttttaaaaatgtcaaattttttaattt-caatacattagattgcacaaacttt 50644213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 30464095 - 30463975
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    ||||||||||||||||||||| |  ||||||||| |||||||| | |||  ||| |||| || | |||||| || |||  |||||||||  ||| |||||    
T  30464095 aagggtcttgttaacgagtgttc--ggggcactcgttaagcattccaaaagaagaaattattctataaaaaagtcaaacatttcaatttttaatgcattg 30463998  T
Q  127 attacacaaactttcataaaaaa 149  Q
    |||||| ||| ||||| ||||||    
T  30463997 attacaaaaaatttcaaaaaaaa 30463975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 8703427 - 8703377
Alignment:
Q  54 ggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaa 104  Q
    ||||||| |||||||| ||||| |||| |||||||||||||||| ||||||    
T  8703427 ggcactcgttaagcattctaaaataagcaattgttatttaaaaaagttaaa 8703377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 9055314 - 9055264
Alignment:
Q  54 ggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaa 104  Q
    ||||||| |||||||| ||||| |||| |||||||||||||||| ||||||    
T  9055314 ggcactcgttaagcattctaaaataagcaattgttatttaaaaaagttaaa 9055264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 40425080 - 40425186
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacatt 125  Q
    |||||||||||||||| ||||   | ||||||||||||||  || | ||||| || || | ||  ||||||||||||||  || ||| ||||||||||||    
T  40425080 taagggtcttgttaacaagtgctttcggggcactctttaaagatcccaaatttagaaaatatttcttaaaaatgttaaatgttacaaattccaatacatt 40425179  T
Q  126 gattaca 132  Q
    |||||||    
T  40425180 gattaca 40425186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 16678898 - 16678978
Alignment:
Q  34 ttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaattt 115  Q
    ||||||||||||| |||| || |||||||||| ||  |||||| |||||||| || ||| ||||| | ||||||||||||||    
T  16678898 ttgttaacgagtg-ccttcggacactctttaaacactctaaataaagtaattattcttttaaaatataaaagttttcaattt 16678978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 22853976 - 22853915
Alignment:
Q  92 taaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaatta 152  Q
    ||||||||| ||||||||||||||  | |||| || |||||| |||||||||||||||||||    
T  22853976 taaaaatgtcaaagttttcaatttttattacactttattacataaactttcataaaaaatta 22853915  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 49003201 - 49003163
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  49003201 gggtcttgttaacgagtgtcc--ggggcactctttaagcat 49003163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 7278306 - 7278254
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaagcatactaaatta 78  Q
    ||||||||||| ||||||||| |||  |||||||||||||| ||||| |||||    
T  7278306 taagggtcttgctaacgagtgccctaagggcactctttaaggatactcaatta 7278254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 25548272 - 25548212
Alignment:
Q  93 aaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||| ||||||  |||||||||| ||| ||||||||||||| | ||||||||||| ||||    
T  25548272 aaaaaagttaaatatttcaatttctaatgcattgattacacatattttcataaaaatttat 25548212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 39400416 - 39400312
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattga 127  Q
    ||||| ||||||||||||| ||  | | ||||||||||| |||||||| ||| ||||| || |||||| | ||||||  ||| ||||| |||| |||| |    
T  39400416 agggttttgttaacgagtgcccccgtgacactctttaagtatactaaaataattaattattctttaaacaagttaaacattttaattttcaatgcattaa 39400317  T
Q  128 ttaca 132  Q
    |||||    
T  39400316 ttaca 39400312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 52308986 - 52309026
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatac 71  Q
    |||||||||||||||| ||  ||||||||||||||||||||    
T  52308986 gtcttgttaacgagtgcccccggggcactctttaagcatac 52309026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 34299883 - 34299762
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    |||||||||||||||||||| ||  |||||||| ||||||||| ||| |||||| |||| || ||||||||||| |||||||||||||| |||  || ||    
T  34299883 aagggtcttgttaacgagtgcccccggggcactttttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactg 34299784  T
Q  127 attacacaaactttcataaaaa 148  Q
    ||||||||||||||||||||||    
T  34299783 attacacaaactttcataaaaa 34299762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 8237950 - 8238037
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||| |||||||||||||||||| || ||||||||||| |||||||||| ||| |||| || ||||||||||||||||||||||||    
T  8237950 tttaagtatactaaattaagtaattattctttaaaaatgtcaaagttttcatttttcaatgcactgattacacaaactttcataaaaa 8238037  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 31498741 - 31498656
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaacttt 140  Q
    ||||||||||| ||| ||||||||||||| | || ||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  31498741 gcactctttaaacattctaaattaagtaaatatttttttaaaatgttaaagttttcaattttcaatacattgattgcacaaacttt 31498656  T

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Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 44452153 - 44452056
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaatta 152  Q
    |||||||||| ||| ||||||||||||||| |||||||||||| | |||  |||||||||||||| || || ||||||||||||||||||||||||||    
T  44452153 cactctttaaacattctaaattaagtaattattatttaaaaatatcaaaagtttcaatttccaatgcactttattacacaaactttcataaaaaatta 44452056  T

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Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 26871736 - 26871862
Alignment:
Q  25 ataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacat 124  Q
    |||| ||| ||||||||||||||||  || ||||| ||||||||| |||||| |||||||| || ||| ||||| | |||||||| ||||| || || |     
T  26871736 ataaaggtattgttaacgagtgtccc-ggagcactatttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttgaattttcattatac 26871834  T
Q  125 tgattacacaaactttcataaaaaatta 152  Q
    |||||||||||||||| |||||||||||    
T  26871835 tgattacacaaacttttataaaaaatta 26871862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 19619993 - 19620079
Alignment:
Q  62 ttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||| |||||||||| |||| || ||||||||||| ||||||||||||||||||| || |||||| ||||  |||||||||||    
T  19619993 ttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgattatacaacttttcataaaaa 19620079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 43492314 - 43492220
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| ||||||||||||||| || |||| |||||| ||| ||| ||||||||||| || || |||||||||||||| |||||||    
T  43492314 gcactctttaagcattctaaattaagtaattattctttagaaatgtcaaaatttacaatttccaatgcactttattacacaaactttaataaaaa 43492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 24610946 - 24610852
Alignment:
Q  59 tctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    ||||||| ||| |||||||||  |||| || ||| |||||||||||||||| |||||| ||| || | |||||||||||||| ||||||||||||    
T  24610946 tctttaaacatgctaaattaaacaattattcttttaaaatgttaaagttttgaatttctaattcactaattacacaaacttttataaaaaattat 24610852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 46716173 - 46716267
Alignment:
Q  55 gcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaa 149  Q
    ||||||||||| ||| ||||||||| ||||| || ||||||||| | |||||||||||| | |||| |||| |||| ||||||||| ||||||||    
T  46716173 gcactctttaaccattctaaattaaataattattctttaaaaatatcaaagttttcaatgttcaatgcattaattatacaaacttttataaaaaa 46716267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 5482503 - 5482427
Alignment:
Q  71 ctaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||| || ||| ||||||| |||||||||| |||||||| ||||| ||||||||| |||||||||||    
T  5482503 ctaaattaagtaattattcttttaaaatgtcaaagttttca-tttccaatgcattggttacacaaaatttcataaaaa 5482427  T

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Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 5907794 - 5907909
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    ||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||| || |||  |||||| ||| ||||  ||||||||| || | |||    
T  5907794 ggtcttgttaacgagtgccctaggg-cactctttaagcattctaaattaagtaattatt-tttttaaatgtcaaacttttttatttccaatgcactaatt 5907891  T
Q  130 acacaaactttcataaaa 147  Q
    |||| || ||||||||||    
T  5907892 acactaattttcataaaa 5907909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 41150126 - 41150033
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaa 149  Q
    |||| |||||||||  |||||||||||||| || ||||||| |||||||| ||||||||  |||| || |||||| ||||| ||||||||||||    
T  41150126 cactttttaagcatcataaattaagtaattattctttaaaagtgttaaagatttcaattcacaatgcactgattatacaaattttcataaaaaa 41150033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 3267721 - 3267629
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    |||||||||||||| |||||| |||||||| || ||| ||||| | ||||||||| |||| |||| || | |||||||||||||| |||||||    
T  3267721 cactctttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttccattttcaatgcactcattacacaaacttttataaaaa 3267629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 1360503 - 1360609
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    ||||||||||||| | |||||||  ||| |||||||||||||| | ||| | ||||||| || |||||||| ||||||  |||| ||||||||| |||||    
T  1360503 aagggtcttgtta-caagtgtccccgggacactctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattg 1360601  T
Q  127 attacaca 134  Q
    ||||||||    
T  1360602 attacaca 1360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 26872896 - 26872798
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaaattat 153  Q
    |||| ||||||||| |||||| |||||||| ||||||| |||| | |||  |||||||||||||| || || |||| ||||||||||| ||||||||||    
T  26872896 cactttttaagcattctaaatcaagtaattattatttataaatatcaaaagtttcaatttccaatgcattttattatacaaactttcacaaaaaattat 26872798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 27338231 - 27338337
Alignment:
Q  30 ggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatt 129  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||   |||| || ||||||||  | |||   |||||||||||||| ||| | |    
T  27338231 ggtcttgtgaacgagtgttcttggggcactctttaagcatgctaaattagaaaattattctttaaaaaaatcaaacagttcaatttccaatatattaaat 27338330  T
Q  130 acacaaa 136  Q
    |||||||    
T  27338331 acacaaa 27338337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 17157908 - 17157868
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  17157908 gggtcttgttaacgagtgcccttggggcactctttaagcat 17157868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 10032057 - 10031954
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgatta 130  Q
    |||| ||||||||||| ||  ||| |||||||||||||| | ||| | ||||||| || ||| |||| ||||||  |||| ||||||||| |||||||||    
T  10032057 gtctcgttaacgagtgcccccgggacactctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgatta 10031958  T
Q  131 caca 134  Q
    ||||    
T  10031957 caca 10031954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 18926296 - 18926414
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgat 128  Q
    |||| ||||||||||||||||| ||| ||||||||||||||  ||||| | | |||| || |||||||| || |||   |||||||| |||| ||||||     
T  18926296 gggttttgttaacgagtgtcctaggg-cactctttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaa 18926394  T
Q  129 tacacaaactttcataaaaa 148  Q
    |||||||  |||||||||||    
T  18926395 tacacaacttttcataaaaa 18926414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 25176434 - 25176339
Alignment:
Q  21 tattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttc 116  Q
    |||| ||| |||||||||||||| ||||| | ||||||||||||| |||  |||||||  ||||| || ||| ||||||| ||| |||||||||||    
T  25176434 tattttaaaggtcttgttaacgaatgtccctagggcactctttaaacatgttaaattagataattattcttttaaaatgtcaaatttttcaatttc 25176339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 27766835 - 27766776
Alignment:
Q  18 tattattataagggtcttgttaacgagtgtccttggggcactctttaagcatactaaatt 77  Q
    |||||||| |||||||||||||||||||| ||   ||||||||||||||||| |||||||    
T  27766835 tattattaaaagggtcttgttaacgagtgcccccagggcactctttaagcattctaaatt 27766776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 39316404 - 39316301
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattatat 155  Q
    ||||||||||||||| |||||||||||||| || || || ||||| ||| ||||||||||  | |  | || |||||||| |||||||||||| |||||     
T  39316404 cactctttaagcatattaaattaagtaattattcttcaataatgtcaaaattttcaatttttactgtactggttacacaagctttcataaaaagttataa 39316305  T
Q  156 ttta 159  Q
    ||||    
T  39316304 ttta 39316301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 32699338 - 32699395
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    ||||||||||||||||||| | || |||||||||||||| ||||||||||||| |||||    
T  32699338 aagggtcttgttaacgagtattct-ggggcactctttaaacatactaaattaattaatt 32699395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 27076270 - 27076213
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    |||||||||||||||||||||||| | |||||||||||| || |||||| ||| ||||    
T  27076270 agggtcttgttaacgagtgtccttagagcactctttaaggattctaaataaagaaatt 27076213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 27202031 - 27202088
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    |||||||||||||||||||||||| | |||||||||||| || |||||| ||| ||||    
T  27202031 agggtcttgttaacgagtgtccttagagcactctttaaggattctaaataaagaaatt 27202088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 38988680 - 38988765
Alignment:
Q  35 tgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaat 120  Q
    |||||||||||||| ||||  ||||| |||||| |  |||||||||||||  || ||||| ||||||||||| || ||||||||||    
T  38988680 tgttaacgagtgtctttggaacactcattaagctttttaaattaagtaataattttttaataatgttaaagtgtttaatttccaat 38988765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 24299237 - 24299145
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||||||  ||||||||| |||| ||  |||||||||| ||| |||| |||||||||| || |||||| ||||  ||||||||||| ||||    
T  24299237 tttaagcatgttaaattaagaaattattccttaaaaatgtcaaattttttaatttccaatgcactgattatacaacttttcataaaaagttat 24299145  T

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Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 25037071 - 25036987
Alignment:
Q  61 tttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcata 144  Q
    |||||||||  |||||||||||||| ||||||||||| || ||| |||| ||||| |||| || || ||| ||||||||||||||    
T  25037071 tttaagcattttaaattaagtaattattatttaaaaaggtcaaaatttttaattttcaatgcactttattgcacaaactttcata 25036987  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 85775 - 85720
Alignment:
Q  90 tttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataa 145  Q
    ||||||||||||||| |||  |||||||||||||||||| ||| ||||||| ||||    
T  85775 tttaaaaatgttaaattttataatttccaatacattgatcacataaacttttataa 85720  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 6392177 - 6392268
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||| |||||||||| |||| || ||| ||||  | ||||||||||||||||  | |||  |||||||| ||||| |||||||    
T  6392177 actctttaagcattctaaattaagaaattattctttcaaaacttaaaagttttcaatttccgttgcatcaattacacagacttttataaaaa 6392268  T

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Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 6775197 - 6775236
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  6775197 aagggtcttgttaaggagtgtccttagggcactctttaag 6775236  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 27123242 - 27123297
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaat 84  Q
    |||||||||||||||||| ||  |||||||||||||||||| | ||||| ||||||    
T  27123242 gggtcttgttaacgagtgcccccggggcactctttaagcatcccaaatttagtaat 27123297  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 43996319 - 43996366
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaa 74  Q
    |||||| ||||||||||||||| | ||| |||||||||||||||||||    
T  43996319 aagggttttgttaacgagtgtcatcgggacactctttaagcatactaa 43996366  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 47507576 - 47507683
Alignment:
Q  27 aagggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattg 126  Q
    ||||||||||||||||||||||   ||||||||||||||| || |||||  ||| |||  || | ||||||  | |||| ||||||||||| ||  ||||    
T  47507576 aagggtcttgttaacgagtgtctccggggcactctttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtattg 47507675  T
Q  127 attacaca 134  Q
    ||||||||    
T  47507676 attacaca 47507683  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 10453493 - 10453539
Alignment:
Q  90 tttaaaaatgttaaagttttcaatttccaatacattgattacacaaa 136  Q
    ||||||||| ||||| |||||||||| |||| |||||||||||||||    
T  10453493 tttaaaaatattaaaattttcaattttcaatgcattgattacacaaa 10453539  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 28663280 - 28663236
Alignment:
Q  24 tataagggtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    ||||||||||||||||||||||| || || ||||||||||||||||    
T  28663280 tataagggtcttgttaacgagtg-ccctgaggcactctttaagcat 28663236  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 35395906 - 35395998
Alignment:
Q  59 tctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaatta 152  Q
    |||||||| || ||| ||||||||||| || ||||||||| | |||||||| |||||  |||| |||||||||| | ||| |||| ||||||||    
T  35395906 tctttaagtattctatattaagtaattattttttaaaaatatcaaagtttttaatttttaata-attgattacatagactatcatgaaaaatta 35395998  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 42890661 - 42890605
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaagcatactaaattaagtaatt 85  Q
    ||||||||| ||||||||||| |||||| | ||||||||||||||||| |||| ||||    
T  42890661 agggtcttgataacgagtgtc-ttggggtattctttaagcatactaaaataagcaatt 42890605  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 7432656 - 7432724
Alignment:
Q  81 taattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    ||||| |||||||||||| |||||||||| ||||| |||| || || ||| |||||||||| |||||||    
T  7432656 taattattatttaaaaatattaaagtttttaattttcaatgcactttattgcacaaacttttataaaaa 7432724  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 28324241 - 28324193
Alignment:
Q  31 gtcttgttaacgagtgtccttggggcactctttaagcatactaaattaa 79  Q
    |||| |||||||||||||||| |||||||||||||| || | |||||||    
T  28324241 gtctcgttaacgagtgtccttagggcactctttaaggattccaaattaa 28324193  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 32829094 - 32829134
Alignment:
Q  29 gggtcttgttaacgagtgtccttggggcactctttaagcat 69  Q
    ||||||||||||||||||| | ||||||| |||||||||||    
T  32829094 gggtcttgttaacgagtgttcctggggcattctttaagcat 32829134  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 33887963 - 33887887
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattaca 132  Q
    |||||||||||||| | ||| ||| ||||| || |||||||| || |||  ||||||||| |||| |||||||||||    
T  33887963 cactctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattaca 33887887  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 37135542 - 37135451
Alignment:
Q  57 actctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaataca-ttgattacacaaactttcataaaaa 148  Q
    |||||||||| ||  |||||||||||||| |||||||||||| | |||  ||| ||||| ||||||| || | ||||||||| ||||||||||    
T  37135542 actctttaagtattataaattaagtaattattatttaaaaatatcaaaagttttaattttcaatacactttactacacaaac-ttcataaaaa 37135451  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 44319996 - 44319956
Alignment:
Q  26 taagggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    |||||||||||||||||||||||||  || |||||||||||    
T  44319996 taagggtcttgttaacgagtgtcctaaggacactctttaag 44319956  T

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Target: scaffold0010 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 26693 - 26788
Alignment:
Q  53 gggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||| |||| || ||||||||||||||||| ||||||    
T  26693 gggcactctttaagcatgctaaattaagtaattattattttaaaatgtcaaagttttcaattttcaatgcactgattacacaaactttcgtaaaaa 26788  T

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Target: scaffold0236 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 19578 - 19659
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaaattat 153  Q
    |||||||||||||| || ||||||||||||||||||||||||||  |||| || ||||||||||| ||||||||||| ||||    
T  19578 taaattaagtaattattctttaaaaatgttaaagttttcaatttttaatatatcgattacacaaattttcataaaaagttat 19659  T

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Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 5753 - 5816
Alignment:
Q  52 ggggcactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaattt 115  Q
    ||||||||||||||| ||  |||||||||||||| || ||||||||||| ||||||||||||||    
T  5753 ggggcactctttaagaattttaaattaagtaatttttctttaaaaatgtcaaagttttcaattt 5816  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 189064 - 189154
Alignment:
Q  56 cactctttaagcatactaaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaa 146  Q
    ||||||||||||||  |||| |||| |||| || |||||||| ||||||  |||| ||||| |||||||| |||||||| | |||||||||    
T  189064 cactctttaagcattttaaaataagcaattattctttaaaaaagttaaatatttctatttctaatacattaattacacatattttcataaa 189154  T

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Target: scaffold0037 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 35274 - 35349
Alignment:
Q  72 taaattaagtaattgttatttaaaaatgttaaagttttcaatttccaatacattgattacacaaactttcataaaaa 148  Q
    ||||| |||||||| || ||||||| ||||||| |||||||||| || | || |||||||| |||||||||||||||    
T  35274 taaatcaagtaattattttttaaaa-tgttaaacttttcaattttcagtgcaatgattacataaactttcataaaaa 35349  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 19657 - 19695
Alignment:
Q  28 agggtcttgttaacgagtgtccttggggcactctttaag 66  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  19657 agggtcttgttaacgagtgcccttagggcactctttaag 19695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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