View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14464_low_35 (Length: 271)
Name: NF14464_low_35
Description: NF14464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14464_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 34338867 - 34338616
Alignment:
| Q |
1 |
atgataactaaaaaatgtggaaactaatcttaaaagacaatcgacgatactatgataagaataattcctatgagataatctaagttactccaagataata |
100 |
Q |
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| T |
34338867 |
atgataactaaaaaatgtggaaactaatcttaaaagataatcgacgatactatgataagaataattcctatgagataatctaagttactccaagatacta |
34338768 |
T |
|
| Q |
101 |
ccaagcctctacacacattgtataaagttttatcgttgttaccttcatttttataaagaagagttaaattttggcataaggtacgatctgtcagtgcata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
34338767 |
ccaagcctctacacacattgtataaagttttatcgttgttaccttcatttttataaagaagagttaaa-tttggcataaggtacgatctgtcagtgcata |
34338669 |
T |
|
| Q |
201 |
cccgaaacacttttgcattaggcggtatgtcagatataaaacattcatgtact |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34338668 |
cccgaaacacttttgcattaggcggtatgtcagatataaaacattcatgtact |
34338616 |
T |
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