View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14466_low_13 (Length: 247)
Name: NF14466_low_13
Description: NF14466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14466_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 5168416 - 5168202
Alignment:
| Q |
18 |
gttttgttgttgtatataacaacgttatgagaatgaatatgaaaagatacatcacaaaaataaatagattttttctttattggacaaatataagagttag |
117 |
Q |
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| T |
5168416 |
gttttgttgttgtatataacaacgatatgagaatgaatatgaaaagatacatcacaaaaataaatagattttttctttattggacaaatataagagttag |
5168317 |
T |
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| Q |
118 |
gagtaaaagaaaagacttcgttgattaactatgttctttgaatagagaaatattagcaagttagtggttaccttagtttttagagtttgaacattaaatc |
217 |
Q |
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| T |
5168316 |
gagtaaaagaaaagacttcgttgattaactatgttctttgaatagagaaatattagcaagttagtggttaccttagtttttagagtttgaacattaaatc |
5168217 |
T |
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| Q |
218 |
cgtaaatctcctatg |
232 |
Q |
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| T |
5168216 |
cgtaaatctcctatg |
5168202 |
T |
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