View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14467_low_1 (Length: 686)

Name: NF14467_low_1
Description: NF14467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14467_low_1
NF14467_low_1
[»] chr5 (9 HSPs)
chr5 (2-427)||(40946844-40947278)
chr5 (470-669)||(38836647-38836856)
chr5 (565-668)||(26863713-26863816)
chr5 (470-670)||(38840566-38840776)
chr5 (562-668)||(26857470-26857576)
chr5 (565-670)||(8460163-8460268)
chr5 (595-670)||(40933232-40933307)
chr5 (557-670)||(40936588-40936702)
chr5 (562-635)||(32965767-32965840)
[»] chr8 (19 HSPs)
chr8 (2-320)||(26955692-26956008)
chr8 (473-670)||(3303062-3303259)
chr8 (470-670)||(3299993-3300192)
chr8 (470-670)||(14673256-14673466)
chr8 (470-670)||(21834714-21834925)
chr8 (478-670)||(14676470-14676672)
chr8 (470-670)||(36281319-36281529)
chr8 (547-670)||(14369708-14369831)
chr8 (547-670)||(14370259-14370382)
chr8 (562-670)||(31711118-31711226)
chr8 (547-670)||(14366119-14366242)
chr8 (573-670)||(21408365-21408462)
chr8 (573-670)||(21802857-21802954)
chr8 (562-670)||(31708898-31709006)
chr8 (562-670)||(21938603-21938712)
chr8 (547-670)||(20134966-20135089)
chr8 (573-670)||(20131843-20131940)
chr8 (562-659)||(21936093-21936191)
chr8 (547-658)||(17526656-17526767)
[»] chr6 (20 HSPs)
chr6 (470-670)||(19019321-19019521)
chr6 (470-670)||(8649951-8650151)
chr6 (470-670)||(8667981-8668181)
chr6 (470-670)||(19011690-19011890)
chr6 (544-670)||(16688532-16688658)
chr6 (546-670)||(22467514-22467638)
chr6 (559-670)||(23607046-23607157)
chr6 (545-669)||(16666255-16666379)
chr6 (547-670)||(19573692-19573815)
chr6 (562-670)||(20090502-20090610)
chr6 (559-670)||(19008541-19008652)
chr6 (547-670)||(11231287-11231410)
chr6 (559-670)||(18929441-18929552)
chr6 (547-670)||(19577314-19577433)
chr6 (562-658)||(25970119-25970216)
chr6 (562-658)||(25974559-25974656)
chr6 (562-655)||(13727716-13727810)
chr6 (562-666)||(17996880-17996985)
chr6 (440-468)||(4279876-4279904)
chr6 (593-669)||(11091905-11091981)
[»] chr2 (13 HSPs)
chr2 (470-670)||(7310913-7311112)
chr2 (470-670)||(45278843-45279043)
chr2 (470-670)||(45286142-45286342)
chr2 (470-669)||(26126113-26126312)
chr2 (470-669)||(5771767-5771958)
chr2 (470-627)||(26120693-26120850)
chr2 (470-670)||(29603809-29604020)
chr2 (562-670)||(4876778-4876886)
chr2 (562-670)||(3071602-3071711)
chr2 (562-670)||(23692726-23692835)
chr2 (562-670)||(23696513-23696622)
chr2 (147-251)||(33854016-33854119)
chr2 (470-557)||(17932860-17932947)
[»] chr1 (12 HSPs)
chr1 (470-670)||(15142681-15142881)
chr1 (470-670)||(15158107-15158307)
chr1 (562-670)||(12020256-12020364)
chr1 (562-670)||(19749511-19749619)
chr1 (562-670)||(20442501-20442609)
chr1 (470-669)||(20435263-20435471)
chr1 (562-670)||(19751737-19751845)
chr1 (562-670)||(20514362-20514470)
chr1 (562-670)||(24276860-24276968)
chr1 (562-670)||(24280973-24281081)
chr1 (562-660)||(18433183-18433282)
chr1 (596-670)||(36910506-36910580)
[»] scaffold0074 (1 HSPs)
scaffold0074 (470-670)||(56392-56592)
[»] scaffold1505 (1 HSPs)
scaffold1505 (461-670)||(451-659)
[»] chr3 (24 HSPs)
chr3 (470-670)||(18556557-18556747)
chr3 (470-670)||(26900625-26900815)
chr3 (442-670)||(26907234-26907454)
chr3 (562-670)||(94572-94680)
chr3 (562-670)||(8854143-8854251)
chr3 (573-670)||(103434-103531)
chr3 (547-670)||(16091824-16091947)
chr3 (547-670)||(16082648-16082771)
chr3 (562-670)||(8368282-8368391)
chr3 (565-670)||(17601683-17601789)
chr3 (562-670)||(14561103-14561211)
chr3 (562-670)||(14566287-14566395)
chr3 (595-667)||(17593706-17593778)
chr3 (559-670)||(38700161-38700273)
chr3 (557-671)||(10813033-10813148)
chr3 (562-631)||(8857020-8857089)
chr3 (573-670)||(10776899-10776996)
chr3 (558-670)||(14789750-14789864)
chr3 (608-670)||(10815935-10815997)
chr3 (563-669)||(15926752-15926858)
chr3 (565-670)||(19767704-19767811)
chr3 (356-415)||(44712411-44712469)
chr3 (571-615)||(14429821-14429865)
chr3 (626-670)||(15417785-15417829)
[»] scaffold0202 (2 HSPs)
scaffold0202 (470-669)||(13889-14098)
scaffold0202 (470-665)||(10406-10611)
[»] scaffold0130 (2 HSPs)
scaffold0130 (470-669)||(15011-15220)
scaffold0130 (470-658)||(19021-19219)
[»] scaffold0320 (1 HSPs)
scaffold0320 (562-667)||(12018-12123)
[»] chr4 (8 HSPs)
chr4 (562-670)||(10968728-10968836)
chr4 (562-670)||(10754959-10755067)
chr4 (562-670)||(10757236-10757344)
chr4 (562-670)||(10970407-10970515)
chr4 (562-670)||(23878703-23878811)
chr4 (565-667)||(23882354-23882457)
chr4 (562-670)||(27789042-27789152)
chr4 (634-666)||(36539434-36539466)
[»] scaffold0167 (1 HSPs)
scaffold0167 (562-667)||(10487-10592)
[»] scaffold1778 (1 HSPs)
scaffold1778 (562-670)||(998-1106)
[»] scaffold0878 (1 HSPs)
scaffold0878 (561-670)||(4237-4346)
[»] scaffold0369 (1 HSPs)
scaffold0369 (561-670)||(7546-7655)
[»] scaffold0179 (2 HSPs)
scaffold0179 (562-670)||(27488-27596)
scaffold0179 (573-670)||(24840-24937)
[»] chr7 (14 HSPs)
chr7 (562-666)||(11527320-11527424)
chr7 (562-666)||(11544725-11544829)
chr7 (562-670)||(15932314-15932422)
chr7 (562-670)||(23532541-23532649)
chr7 (8-103)||(34314981-34315076)
chr7 (547-670)||(44356982-44357105)
chr7 (573-670)||(44360128-44360225)
chr7 (562-658)||(23522322-23522418)
chr7 (562-666)||(11100140-11100245)
chr7 (356-415)||(18941186-18941244)
chr7 (595-666)||(30218059-30218130)
chr7 (439-542)||(15942386-15942496)
chr7 (562-669)||(43173456-43173563)
chr7 (49-97)||(11201137-11201185)
[»] scaffold0139 (1 HSPs)
scaffold0139 (562-670)||(2931-3040)
[»] scaffold0018 (1 HSPs)
scaffold0018 (561-670)||(194589-194698)
[»] scaffold0264 (1 HSPs)
scaffold0264 (562-670)||(13036-13144)
[»] scaffold0208 (1 HSPs)
scaffold0208 (562-670)||(1542-1650)
[»] scaffold0045 (1 HSPs)
scaffold0045 (562-670)||(78672-78780)
[»] scaffold0023 (2 HSPs)
scaffold0023 (547-670)||(149863-149987)
scaffold0023 (562-670)||(146671-146780)
[»] scaffold0037 (1 HSPs)
scaffold0037 (562-670)||(20569-20678)
[»] scaffold0123 (1 HSPs)
scaffold0123 (595-658)||(8787-8850)
[»] scaffold2018 (1 HSPs)
scaffold2018 (440-468)||(825-853)
[»] scaffold0071 (1 HSPs)
scaffold0071 (626-670)||(44409-44453)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 2 - 427
Target Start/End: Complemental strand, 40947278 - 40946844
Alignment:
Q  2 gtgattgtcaataccatagaagagagcttgatcggcgagttcttgtttggagaagcggcgggcggtagaggggaggtggttggcgcggaggagagaaagg 101  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||  ||    
T  40947278 gtgattgtcaataccatagaagagagctttatcgg--agttcttgtttggagaagcggcgggcagtggaggggaggtggttggcgcggaggagaga--gg 40947183  T
Q  102 aatcagaaggggat--cgtagatgattttcgaatcaaagtggaagaaggagaagaatgaatggatgtaacagataggaagggtgaaaaagctccataaga 199  Q
    ||||||||||  ||  |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  40947182 aatcagaaggacatggcgtttatgattttcgaatcaaagtggaagaaggagaaaaatgaatggatgtaacagatgggaagggtgaaaaagctccataaga 40947083  T
Q  200 aagagtcatggagaagatcataagcaagagagagtttgggacacgaagaagaaaagagaannnnnnnnagaaaaggaagcctaaaaaacgtgtatcagtt 299  Q
    |||||| ||||||||||||||| | |||||| || ||||||||| |||||||||||||||        ||||||||||||||||||||  | ||||||||    
T  40947082 aagagttatggagaagatcatacgaaagagaaaggttgggacacaaagaagaaaagagaattttttttagaaaaggaagcctaaaaaaattatatcagtt 40946983  T
Q  300 ttttgtttgaaaatagtag-----catgggaaaccta---taaaagttgggaagtctgccgcgg--aagtggaggaga--atattgttgtgaagtgtaca 387  Q
    |||||||||||||||||||     |||||||||||||    | |||||| ||||||||||| ||  ||||||||||||  |||||| | ||||| ||||     
T  40946982 ttttgtttgaaaatagtagcaatacatgggaaacctacagaagaagttgagaagtctgccgtgggaaagtggaggagaatatattggtatgaagcgtacg 40946883  T
Q  388 ttacccatggcacttgtgacttaaaattaaaacaaaatgt 427  Q
    ||||| || |||||| ||| |||||||| ||| |||||||    
T  40946882 ttaccaat-gcacttatgatttaaaattgaaagaaaatgt 40946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 470 - 669
Target Start/End: Original strand, 38836647 - 38836856
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataa----------gccgcctttctaa 559  Q
    |||||||||||||||| ||| ||| | ||||||| || |||| || |||||| |||||||||||||||||||||| |          |||||||| ||||    
T  38836647 acctccaaaagggcttcttagaccttcagaaaggactcagcgcccttgaagaaagcccaaaggcccaaggcgcatgattcccagatagccgccttactaa 38836746  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    | ||||||||||||||||| | |||||||||  |||||||||||||||||||||||||||||||||  |||| |||||| |||||| ||||||||||| |    
T  38836747 aactctagaaccttctagagatcgcccaaaatacctaaatacccctattacttggagactaagcaataaaaacccaagcccatagagggctataaatatc 38836846  T
Q  660 atccttgaga 669  Q
    | ||||||||    
T  38836847 acccttgaga 38836856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 565 - 668
Target Start/End: Complemental strand, 26863816 - 26863713
Alignment:
Q  565 tagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatcct 664  Q
    ||||| |||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| |||    
T  26863816 tagaatcttctagaaaccgccctaaatacctaaatacccctattacttggagattaagcaaccaaaacccaagcccatagaaggctataaataccaccct 26863717  T
Q  665 tgag 668  Q
    ||||    
T  26863716 tgag 26863713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 38840566 - 38840776
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataa----------gccgcctttctaa 559  Q
    |||||||||||||||| ||| ||| | | ||||| || |||| || |||||| |||||||||||||||||||||| |          |||||||| ||||    
T  38840566 acctccaaaagggcttcttagaccttcataaaggactcagcgcccttgaagaaagcccaaaggcccaaggcgcatgattcccagatagccgccttactaa 38840665  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    | ||||||||||||||||| | |||||||||  |||||||| || ||||||||||||||||||||| ||||| |||||  |||||| ||||||||||| |    
T  38840666 aactctagaaccttctagagatcgcccaaaatacctaaatatccttattacttggagactaagcaatcaaaacccaagtccatagagggctataaatatc 38840765  T
Q  660 atccttgagaa 670  Q
    | |||||||||    
T  38840766 acccttgagaa 38840776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 562 - 668
Target Start/End: Complemental strand, 26857576 - 26857470
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  ||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||     
T  26857576 ctctagaatcttctagaaaccgccctaaatacctaaatccccctattacttggagattaagcaaccaaaacccaagcccatagaaggctataaataccac 26857477  T
Q  662 ccttgag 668  Q
    |||||||    
T  26857476 ccttgag 26857470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 565 - 670
Target Start/End: Original strand, 8460163 - 8460268
Alignment:
Q  565 tagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatcct 664  Q
    ||||| |||||||||||| ||| |||  | |||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||    
T  8460163 tagaatcttctagaaaccaccctaaatacataaatacccctattacttggagactaagaaaccaaaacccaagcccatagaaggctataaataccaccct 8460262  T
Q  665 tgagaa 670  Q
    ||||||    
T  8460263 tgagaa 8460268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 595 - 670
Target Start/End: Original strand, 40933232 - 40933307
Alignment:
Q  595 taaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  40933232 taaatacccctattacttggaggctaagcaaccaaaacccaagcccatagaaggctataaataccacccttgagaa 40933307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 670
Target Start/End: Original strand, 40936588 - 40936702
Alignment:
Q  557 taaacctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaa 655  Q
    |||| |||||||| |||||||||| |||| | |||  | |||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||    
T  40936588 taaatctctagaatcttctagaaatcgcctataaatacataaatacccctattacttggaggctaagcaacaaaaacccaagcccatagaaggctataaa 40936687  T
Q  656 taccatccttgagaa 670  Q
    ||||| |||||||||    
T  40936688 taccacccttgagaa 40936702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 562 - 635
Target Start/End: Original strand, 32965767 - 32965840
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatcca 635  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||| |||| ||||    
T  32965767 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaatcaaagtcca 32965840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-101; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 2 - 320
Target Start/End: Complemental strand, 26956008 - 26955692
Alignment:
Q  2 gtgattgtcaataccatagaagagagcttgatcggcgagttcttgtttggagaagcggcgggcggtagaggggaggtggttggcgcggaggagagaaagg 101  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||  ||    
T  26956008 gtgattgtcaataccatagaagagagctttatcgg--agttcttgtttggagaagcggcgggcagtggaggggaggtggttggcgcggaggagaga--gg 26955913  T
Q  102 aatcagaaggggat--cgtagatgattttcgaatcaaagtggaagaaggagaagaatgaatggatgtaacagataggaagggtgaaaaagctccataaga 199  Q
    ||||||||||  ||  |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  26955912 aatcagaaggacatggcgtttatgattttcgaatcaaagtggaagaaggagaaaaatgaatggatgtaacagatgggaagggtgaaaaagctccataaga 26955813  T
Q  200 aagagtcatggagaagatcataagcaagagagagtttgggacacgaagaagaaaagagaannnnnnnnagaaaaggaagcctaaaaaacgtgtatcagtt 299  Q
    |||||| ||||||||||||||| | |||||| || ||||||||| ||||||||||||||         ||||||||||||||||||||  | ||||||||    
T  26955812 aagagttatggagaagatcatacgaaagagaaaggttgggacacaaagaagaaaagagatttttttttagaaaaggaagcctaaaaaaattatatcagtt 26955713  T
Q  300 ttttgtttgaaaatagtagca 320  Q
    |||||||||||||||||||||    
T  26955712 ttttgtttgaaaatagtagca 26955692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 473 - 670
Target Start/End: Original strand, 3303062 - 3303259
Alignment:
Q  473 tccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaacct 572  Q
    ||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |    
T  3303062 tccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaaacctctagaactt 3303161  T
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||  ||||||||    
T  3303162 tctagaaaccgtccaaaaggcctaaatacccctattacttggagattaagcaaccacaacccaagctcatagaaggctataaataccacacttgagaa 3303259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 3299993 - 3300192
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  3299993 acctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaaacctctagaa 3300092  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||| ||||||||    
T  3300093 ctttctagaaaccgcccaaaaggcctaaata-ccctattacttggagactaagcaaccaaaacccaagcccatagaagagtataaataccacccttgaga 3300191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 14673256 - 14673466
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcata----------agccgcctttctaa 559  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || || ||| ||||||||||||||||||||||           ||||||||| ||||    
T  14673256 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttggagaaagcccaaaggcccaaggcgcatgtttctcaaatagccgccttactaa 14673355  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  14673356 acctctagaaccttctagaaaccgcccaaaatacctaaatatccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatacc 14673455  T
Q  660 atccttgagaa 670  Q
    | |||| ||||    
T  14673456 acccttcagaa 14673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 21834714 - 21834925
Alignment:
Q  470 acctccaaaagggctttttaaaccctt-agaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcata----------agccgcctttcta 558  Q
    |||||||||||||||| ||| |||| | | ||||| ||||||  || | ||||||||||||||||||||||||| ||          ||||||||| |||    
T  21834714 acctccaaaagggcttcttagacccctcaaaaaggccttagcacccttaaagagagcccaaaggcccaaggcgcgtatttcccagagagccgccttacta 21834813  T
Q  559 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  21834814 aacctctagaaccttctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatac 21834913  T
Q  659 catccttgagaa 670  Q
    || |||||||||    
T  21834914 cacccttgagaa 21834925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 478 - 670
Target Start/End: Original strand, 14676470 - 14676672
Alignment:
Q  478 aagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcata----------agccgcctttctaaacctctag 567  Q
    |||||||| ||| ||||| ||||||| || |||| || || ||| ||||||||||||||||||||||           ||||||||| ||||||||||||    
T  14676470 aagggcttcttagaccctcagaaaggactcagcgcccttggagaaagcccaaaggcccaaggcgcatgtttctcaaatagccgccttactaaacctctag 14676569  T
Q  568 aaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttga 667  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |    
T  14676570 aaccttctagaaaccgcccaaaatacctaaatatccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttca 14676669  T
Q  668 gaa 670  Q
    |||    
T  14676670 gaa 14676672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 36281529 - 36281319
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataa----------gccgcctttctaa 559  Q
    |||||||||||||||| ||| ||| | ||||||| ||  ||| || |||||| |||||||||||||||||||||| |          |||||||| ||||    
T  36281529 acctccaaaagggcttcttagaccttcagaaaggactcggcgcccttgaagaaagcccaaaggcccaaggcgcatgattcccagatagccgccttactaa 36281430  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    | ||||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||| |    
T  36281429 aactctagaaccttctagagatcgcccaaaatacctaaatacccctattacttggagactaagcaatcaaaacccaagcccatagagggctataaatatc 36281330  T
Q  660 atccttgagaa 670  Q
    | |||||||||    
T  36281329 acccttgagaa 36281319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 14369708 - 14369831
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| |||||||||||||||| |||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14369708 gccgccatactaaatctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagcccatagaa 14369807  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  14369808 ggctataaataccacccttgagaa 14369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 14370259 - 14370382
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| |||||||||||||||| |||  |  ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14370259 gccgccatactaaatctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagcccatagaa 14370358  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  14370359 ggctataaataccacccttgagaa 14370382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 31711118 - 31711226
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||     
T  31711118 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagctcattgaaggctataaataccac 31711217  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  31711218 ccttgagaa 31711226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 14366119 - 14366242
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| |||||||||||||||| |||  |  ||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  14366119 gccgccatactaaatctctagaaacttctagaaaccgccctaaatacacaaatacccctattacttggagactaagcaaccaaaatccaagcccatataa 14366218  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  14366219 ggctataaataccacccttgagaa 14366242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 573 - 670
Target Start/End: Original strand, 21408365 - 21408462
Alignment:
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||||    
T  21408365 tctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaa 21408462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 573 - 670
Target Start/End: Original strand, 21802857 - 21802954
Alignment:
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||||    
T  21802857 tctagaaaccgccctaaatacctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgagaa 21802954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 31708898 - 31709006
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||     
T  31708898 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccattgaagactataaataccac 31708997  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  31708998 ccttgagaa 31709006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 21938603 - 21938712
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  | |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  21938603 ctctagaatcttctagaaaccgcccctaaatacataaatacccccattacttggagactaagcaaccgaaatccaagcccatagaaggctataaatacca 21938702  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  21938703 cccttgagaa 21938712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 547 - 670
Target Start/End: Complemental strand, 20135089 - 20134966
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| ||||||||  ||||| ||||||||| |||  | ||||||||||||||| ||||||||||||||||||| | |||||| |||||||    
T  20135089 gccgccatactaaatctctagaaatttctataaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaa 20134990  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  20134989 ggctataaataccacccttgagaa 20134966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 573 - 670
Target Start/End: Complemental strand, 20131940 - 20131843
Alignment:
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||  | ||||||||||||||| ||||||||||||||||||| | |||||| |||||||| |||||||||||| |||||||||    
T  20131940 tctagaaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaa 20131843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 562 - 659
Target Start/End: Original strand, 21936093 - 21936191
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    |||||||| ||||||||||||||||  |||  | ||||||||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||    
T  21936093 ctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagtccatagaaggctataaatacc 21936191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 658
Target Start/End: Complemental strand, 17526767 - 17526656
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||||| || | |||| |||| |||| |||||||||| ||||  | ||||||||||| || |||||   | |||||||| ||| |||||||||||  |    
T  17526767 gccgccttccttagcctccagaagcttccagaaaccgcctaaaatacataaatacccctgttgcttgggagccaagcaaccgaaacccaagctcataaca 17526668  T
Q  647 ggctataaatac 658  Q
    ||||||||||||    
T  17526667 ggctataaatac 17526656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 4e-83; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 19019521 - 19019321
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  19019521 acctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaaacctctagaa 19019422  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  19019421 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaga 19019322  T
Q  670 a 670  Q
    |    
T  19019321 a 19019321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 8649951 - 8650151
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| || || | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  8649951 acctccaaaagggcttcttagacactcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaaacctctagaa 8650050  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  8650051 ccttctagaaaccgcccaaaaggcctaaatacccctattatttggagactaagcaaccaaaactcaagctcatagaaggctataaataccacccttgaga 8650150  T
Q  670 a 670  Q
    |    
T  8650151 a 8650151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 8667981 - 8668181
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  8667981 acctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaaacctctagaa 8668080  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||||    
T  8668081 ccttctagaaaccacccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaagactataaataccacccttgaga 8668180  T
Q  670 a 670  Q
    |    
T  8668181 a 8668181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 19011890 - 19011690
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||    
T  19011890 acctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagggcccaaaagccaaaggcgcagaagccgcctttctaaacctctagaa 19011791  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    ||||||||||||  |||||||  ||||||||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||| ||||||||    
T  19011790 ccttctagaaactacccaaaatacctaaatacccctattacttggacactaagaaaccaaaacccaagcccatagaaggctataaataccacccttgaga 19011691  T
Q  670 a 670  Q
    |    
T  19011690 a 19011690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 544 - 670
Target Start/End: Original strand, 16688532 - 16688658
Alignment:
Q  544 taagccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcata 643  Q
    ||||||||||| ||  ||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16688532 taagccgccttactggacctctaaaaccttctagaaaccgccctaaatacctaaatacccctattacttggagattaagcaaccaaaatccaagcccata 16688631  T
Q  644 gaaggctataaataccatccttgagaa 670  Q
    ||||||||||||||||| |||||||||    
T  16688632 gaaggctataaataccacccttgagaa 16688658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 546 - 670
Target Start/End: Original strand, 22467514 - 22467638
Alignment:
Q  546 agccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcataga 645  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||  |||||||||||||||||||| |||||||||||||| ||| |||||| ||||||    
T  22467514 agccgccttactaaacctctagaaccttatagaaaccccccaaaatacctaaatacccctattactttgagactaagcaaccgaaacccaagcccataga 22467613  T
Q  646 aggctataaataccatccttgagaa 670  Q
    ||||||||||||||| |||||||||    
T  22467614 aggctataaataccacccttgagaa 22467638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 559 - 670
Target Start/End: Complemental strand, 23607157 - 23607046
Alignment:
Q  559 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||||||||||| |||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  23607157 aacctctagaactttctagaaaccgcccaaaatacacaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatac 23607058  T
Q  659 catccttgagaa 670  Q
    |  |||||||||    
T  23607057 ctcccttgagaa 23607046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 545 - 669
Target Start/End: Original strand, 16666255 - 16666379
Alignment:
Q  545 aagccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatag 644  Q
    |||||||||| ||  ||||||||||||||||||||||||||| | |  |||||||||||||| |||||||||| ||||||||||||| |||||| |||||    
T  16666255 aagccgccttactggacctctagaaccttctagaaaccgccctatatacctaaatacccctactacttggagattaagcaaccaaaacccaagcccatag 16666354  T
Q  645 aaggctataaataccatccttgaga 669  Q
    |||||||||||||||| || |||||    
T  16666355 aaggctataaataccacccatgaga 16666379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 547 - 670
Target Start/End: Complemental strand, 19573815 - 19573692
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| |||||| ||||||||| |||  | ||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  19573815 gccgccatactaaatctctagaaacttctataaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagcccatagaa 19573716  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  19573715 ggctataaataccacccttgagaa 19573692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 20090610 - 20090502
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||     
T  20090610 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccataggaggctataaataccac 20090511  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  20090510 ccttgagaa 20090502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 559 - 670
Target Start/End: Complemental strand, 19008652 - 19008541
Alignment:
Q  559 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||||||||||||||||||||||| ||| |||  | |||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||||||||    
T  19008652 aacctctagaaccttctagaaacctcccgaaatacgtaaatacccctattacttggaggctaagcaaccaagacccaagcccatagaaggctataaatac 19008553  T
Q  659 catccttgagaa 670  Q
    || | |||||||    
T  19008552 cacctttgagaa 19008541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 11231287 - 11231410
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| ||||||||| |||||| |||  | |||||||| |||||||||||||||||||||||||| | |||||| |||||||    
T  11231287 gccgccatactaaatctctagaaacttctagaagccgccctaaatacataaataccgctattacttggagactaagcaaccaagacccaagcccatagaa 11231386  T
Q  647 ggctataaataccatccttgagaa 670  Q
    | |||||||||||| |||||||||    
T  11231387 gactataaataccacccttgagaa 11231410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 559 - 670
Target Start/End: Complemental strand, 18929552 - 18929441
Alignment:
Q  559 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||||||||||||||||||||||| ||| |||  | ||||||||||||||| |||||| |||||||||||| | |||||| |||||||||||||||||||    
T  18929552 aacctctagaaccttctagaaaccacccgaaatacgtaaatacccctattatttggaggctaagcaaccaagacccaagcccatagaaggctataaatac 18929453  T
Q  659 catccttgagaa 670  Q
    || | |||||||    
T  18929452 cacctttgagaa 18929441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 547 - 670
Target Start/End: Complemental strand, 19577433 - 19577314
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| |||||||||||||||| | |    ||||||||||||||||||||||||||||||||||| | |||||  |||||||    
T  19577433 gccgccatactaaatctctagaaacttctagaaaccgccctata----taaatacccctattacttggagactaagcaaccaagacccaagtccatagaa 19577338  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  19577337 ggctataaataccacccttgagaa 19577314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 658
Target Start/End: Original strand, 25970119 - 25970216
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||||||| ||||||||||||||||  |||  | |||| |||||||||||||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  25970119 ctctagaatcttctagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccatagaaggctataaatac 25970216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 658
Target Start/End: Original strand, 25974559 - 25974656
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||||||| ||||||||||||||||  |||  | |||| |||||||||||||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  25974559 ctctagaatcttctagaaaccgcccctaaatacataaacacccctattacttggagattaagcaaccgaaacccaagcccatagaaggctataaatac 25974656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 655
Target Start/End: Complemental strand, 13727810 - 13727716
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaa 655  Q
    |||||||| ||||||||||||||||  |||  | |||||||||||||||||| |||||||||||||| ||| |||||  ||||||||||||||||    
T  13727810 ctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttagagactaagcaaccgaaacccaagtccatagaaggctataaa 13727716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 562 - 666
Target Start/End: Complemental strand, 17996985 - 17996880
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  | |||||||||||||||||||| | ||||| |||  ||| |||||| |||||||||||||||||||||    
T  17996985 ctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttgggggctaagtaactgaaacccaagcccatagaaggctataaatacca 17996886  T
Q  661 tccttg 666  Q
     |||||    
T  17996885 cccttg 17996880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 468
Target Start/End: Complemental strand, 4279904 - 4279876
Alignment:
Q  440 aaactggaccgtcataatattcctaaagg 468  Q
    |||||||||||||||||||||||||||||    
T  4279904 aaactggaccgtcataatattcctaaagg 4279876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 593 - 669
Target Start/End: Original strand, 11091905 - 11091981
Alignment:
Q  593 cctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    ||||||||||| |||||||||  | ||||| ||||| ||| || || |||||| |||||||||||| | ||||||||    
T  11091905 cctaaatacccttattacttgctgtctaagtaaccataattcaggcccatagagggctataaatacaaaccttgaga 11091981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 1e-80; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 7311112 - 7310913
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  7311112 acctccaaaagggcttcttagaccctcaaaaagggcttagcg-ccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaaacctctagaa 7311014  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  7311013 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaga 7310914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 45278843 - 45279043
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| ||||||||||||||||||||| | ||||||| |||||||||||||||    
T  45278843 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagcccaaaggcccaaggcgcagaggccgcctctctaaacctctagaa 45278942  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  45278943 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaga 45279042  T
Q  670 a 670  Q
    |    
T  45279043 a 45279043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 45286142 - 45286342
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| ||||||||||||||||||||| | ||||||| |||||||||||||||    
T  45286142 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagcccaaaggcccaaggcgcagaggccgcctctctaaacctctagaa 45286241  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  45286242 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaga 45286341  T
Q  670 a 670  Q
    |    
T  45286342 a 45286342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 470 - 669
Target Start/End: Complemental strand, 26126312 - 26126113
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  26126312 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagccccaaggcccaaggcgcagaagccgcctttctaaacctctagaa 26126213  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||| ||||||||    
T  26126212 tcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaaactcaagcccatagaaggctataaataccacccttgaga 26126113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 470 - 669
Target Start/End: Original strand, 5771767 - 5771958
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || ||||||       ||||||||||||||| |||||||||| |||||||||||||     
T  5771767 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaaga-------aaggcccaaggcgcagaagccgccttcctaaacctctaga- 5771858  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||||    
T  5771859 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttgaga 5771958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 470 - 627
Target Start/End: Complemental strand, 26120850 - 26120693
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  26120850 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagccccaaggcccaaggcgcagaagccgcctttctaaacctctagaa 26120751  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaacc 627  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26120750 tcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaacc 26120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 29604020 - 29603809
Alignment:
Q  470 acctccaaaagggctttttaaacccttaga-aagggcttagcgtccctgaagagagcccaaaggcccaaggcgcata----------agccgcctttcta 558  Q
    |||||||||||||||| ||| |||| |  | |||||||||||| ||||||| |||||||||||||||||||||| ||          |||||||||  ||    
T  29604020 acctccaaaagggcttcttatacccctcaagaagggcttagcgcccctgaaaagagcccaaaggcccaaggcgcgtatctcccataaagccgccttaata 29603921  T
Q  559 aacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  29603920 aacctctagaaccttctagaaaccgcccaaaatacctaaatacccctattacttggagactaagcaaccaaaacccatgcccatagaaggctataaatac 29603821  T
Q  659 catccttgagaa 670  Q
    || |||||||||    
T  29603820 cacccttgagaa 29603809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 4876778 - 4876886
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||     
T  4876778 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagctcattgaaggctataaataccac 4876877  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  4876878 ccttgagaa 4876886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 3071602 - 3071711
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  | ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  3071602 ctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatacca 3071701  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  3071702 cccttgagaa 3071711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 23692726 - 23692835
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  |||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  23692726 ctctagaatcttctagaaaccgcccctaaatacctaaaaacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatacca 23692825  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  23692826 cccttgagaa 23692835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 23696513 - 23696622
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  |||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  23696513 ctctagaatcttctagaaaccgcccctaaatacctaaaaacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatacca 23696612  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  23696613 cccttgagaa 23696622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 251
Target Start/End: Complemental strand, 33854119 - 33854016
Alignment:
Q  147 ggagaagaatgaatggatgtaacagataggaagggtgaaaaagctccataagaaagagtcatggagaagatcataagcaagagagagtttgggacacgaa 246  Q
    ||||||||||||||||  ||||||||| ||||||||||||| |||||||| |||||||  ||| ||||||||| ||| ||||||||| ||||||||| ||    
T  33854119 ggagaagaatgaatggcagtaacagat-ggaagggtgaaaaggctccatacgaaagagcgatgaagaagatcacaagaaagagagaggttgggacacaaa 33854021  T
Q  247 gaaga 251  Q
    |||||    
T  33854020 gaaga 33854016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 557
Target Start/End: Complemental strand, 17932947 - 17932860
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttct 557  Q
    |||||||||||||||| ||  ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||    
T  17932947 acctccaaaagggcttctttgaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttct 17932860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 6e-76; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 15142881 - 15142681
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    ||||||||||||| || ||| ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  15142881 acctccaaaagggattcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaaacctctagaa 15142782  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  15142781 ccttctagaaaccgtccaaaaggcctaaatacccttattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaga 15142682  T
Q  670 a 670  Q
    |    
T  15142681 a 15142681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 15158307 - 15158107
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| | ||| | ||||||||||||| || ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  15158307 acctccaaaagggcttcttagatcctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagtcgcctttctaaacctctagaa 15158208  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  15158207 ccttctagaaaccgccgaaaaggcctaaattcccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaga 15158108  T
Q  670 a 670  Q
    |    
T  15158107 a 15158107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 12020364 - 12020256
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    ||||||||  ||||||||||||||| |||  | ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||     
T  12020364 ctctagaatattctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccac 12020265  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  12020264 ccttgagaa 12020256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 19749511 - 19749619
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||     
T  19749511 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagcccatagaaggctataaataccac 19749610  T
Q  662 ccttgagaa 670  Q
    | |||||||    
T  19749611 ctttgagaa 19749619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 20442501 - 20442609
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| ||||||||| |||||| |||  | ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||     
T  20442501 ctctagaaacttctagaagccgccctaaatacttaaatgcccctattacttggaaactaagcaaccaaaacccaagctcatagaaggctataaataccac 20442600  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  20442601 ccttgagaa 20442609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 669
Target Start/End: Complemental strand, 20435471 - 20435263
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcata----------agccgcctttctaa 559  Q
    |||||||||||||||  ||| ||||| || |||| || |||| || |||||| ||||||||||||||||||||||           | ||||||| ||||    
T  20435471 acctccaaaagggctccttagaccctcaggaaggactcagcg-ccttgaagaaagcccaaaggcccaaggcgcatgtttctcagataaccgccttactaa 20435373  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    |||||||||| ||||||||||| |||  |||  ||||||||||  |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  20435372 acctctagaatcttctagaaacagccataaatacctaaatacctttattacttggagactaagcaactaaaacccaagcccatagaaggctataaatacc 20435273  T
Q  660 atccttgaga 669  Q
    | | ||||||    
T  20435272 accattgaga 20435263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 19751737 - 19751845
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | |||||||||||||||||||||||||||| |||||| | |||||| |||||||||||||||||||||     
T  19751737 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagaaaccaagacccaagcccatagaaggctataaataccac 19751836  T
Q  662 ccttgagaa 670  Q
    | |||||||    
T  19751837 ctttgagaa 19751845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 20514362 - 20514470
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| ||||||||| |||||| |||  | ||||| ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||     
T  20514362 ctctagaaacttctagaagccgccctaaatacttaaatgcccctattacttggaaagtaagcaaccaaaacccaagctcatagaaggctataaataccac 20514461  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  20514462 ccttgagaa 20514470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 24276968 - 24276860
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||| ||| |||||| ||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||     
T  24276968 ctctcgaatcttctaaaaaccgccctaaaaacataaatacccctattacttggagactaagcaaccaaaacccaaacccatagaaggctataaataccac 24276869  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  24276868 ccttgagaa 24276860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 24281081 - 24280973
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| ||||| ||||| |||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||     
T  24281081 ctctagaatcttctggaaactgccctaaaaacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaatatcac 24280982  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  24280981 ccttgagaa 24280973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 562 - 660
Target Start/End: Original strand, 18433183 - 18433282
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  | |||||| ||||||||||||||||||||||||||  || |||||| |||||||| ||||||||||||    
T  18433183 ctctagaatcttctagaaaccgcccctaaatacataaataaccctattacttggagactaagcaaccggaacccaagcccatagaagactataaatacca 18433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 670
Target Start/End: Complemental strand, 36910580 - 36910506
Alignment:
Q  596 aaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    ||||||||||||||||||| ||||||||||||||||  ||||| ||   |||||||||||||||| | |||||||    
T  36910580 aaatacccctattacttggggactaagcaaccaaaactcaagcccacgaaaggctataaataccacctttgagaa 36910506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 56392 - 56592
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    ||||||||||||| || ||| ||||| | ||| ||||||||| || ||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||    
T  56392 acctccaaaagggtttcttagaccctcaaaaacggcttagcgcccttgaagagggcccaaaagcccaaggcgcagaagcctcctttctaaacctctagaa 56491  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  56492 ccttctagaaaccgcccaaaatacctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccacccttgaga 56591  T
Q  670 a 670  Q
    |    
T  56592 a 56592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1505 (Bit Score: 130; Significance: 5e-67; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 461 - 670
Target Start/End: Complemental strand, 659 - 451
Alignment:
Q  461 cctaaaggcacctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaa 560  Q
    |||||||| |||||||||||||||| ||| || || ||||||| || |||| || |||||| ||||| ||||||||||||||| ||||||||||||||||    
T  659 cctaaagg-acctccaaaagggcttcttagactctcagaaaggactcagcgcccttgaagaaagccccaaggcccaaggcgcagaagccgcctttctaaa 561  T
Q  561 cctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||| ||||||||||||    
T  560 cctctagaatcttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccgaagcccaagcccatagaagactataaatacca 461  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  460 cccttgagaa 451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 3e-62; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 470 - 670
Target Start/End: Original strand, 18556557 - 18556747
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||              
T  18556557 acctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggcgcagaagccgcctttctaa---------- 18556646  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  18556647 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccacccttgaga 18556746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 470 - 670
Target Start/End: Complemental strand, 26900815 - 26900625
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataagccgcctttctaaacctctagaa 569  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||||| ||||| |||||||||||||||              
T  26900815 acctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaagcgcagaagccgcctttctaa---------- 26900726  T
Q  570 ccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgaga 669  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||| ||||||||||||| ||||||||    
T  26900725 ccttctagaaaccgcccaaaaggcctaaatacccctattacttgaagactaagcaaccaaaactcaagcccatagaaagctataaataccacccttgaga 26900626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 442 - 670
Target Start/End: Complemental strand, 26907454 - 26907234
Alignment:
Q  442 actggaccgtcataatattcctaaaggc-------acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcc 534  Q
    |||||||||||||||||||||||| | |       |||||||||||||||| ||| ||||| | ||||||||||||| || ||||||||||||||| |||    
T  26907454 actggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcc 26907355  T
Q  535 caaggcgcataagccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatcc 634  Q
    ||| | ||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||| |||     ||||||||| ||    
T  26907354 caaagtgcagaagccgcctttctaa----------ccttctagaaaccgcccaaaaggcctaaatacccctattacttgaaga-----caaccaaaaccc 26907270  T
Q  635 aagctcatagaaggctataaataccatccttgagaa 670  Q
    |||| ||||||| |||||||||||||  ||||||||    
T  26907269 aagcccatagaaagctataaataccactcttgagaa 26907234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 94680 - 94572
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||||    
T  94680 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatggaagactataaataccat 94581  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  94580 ccttgagaa 94572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 8854251 - 8854143
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||     
T  8854251 ctctagaatcttctagaaaccgccctaaatacataaatacccatattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 8854152  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  8854151 ccttgagaa 8854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 573 - 670
Target Start/End: Complemental strand, 103531 - 103434
Alignment:
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  103531 tctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatggaaggctataaataccatccttgagaa 103434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 16091824 - 16091947
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| |||||||||||||||| |||  | |||||| |||||||||||||| ||||||||||||| | |||||| |||||||    
T  16091824 gccgccatactaaatctctagaaacttctagaaaccgccctaaatacataaataaccctattacttggatactaagcaaccaagacccaagcccatagaa 16091923  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  16091924 ggctataaataccacccttgagaa 16091947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 16082648 - 16082771
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| |||||||| ||||||||||| |||| |||  | |||||| |||||||||||||| ||||||||||||| | |||||| |||||||    
T  16082648 gccgccatactaaatctctagaaacttctagaaactgccctaaatacataaataaccctattacttggaaactaagcaaccaagacccaagcccatagaa 16082747  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  16082748 ggctataaataccacccttgagaa 16082771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 8368391 - 8368282
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  | |||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||||||||    
T  8368391 ctctagaatcttctagaaaccgcccttaaatacataaatacccctattacttggagactaagtaaccgaaacccaagcccatagaaggctataaatacca 8368292  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  8368291 cccttgagaa 8368282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 565 - 670
Target Start/End: Original strand, 17601683 - 17601789
Alignment:
Q  565 tagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatcc 663  Q
    ||||| ||||||||||||||||  |||  | ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| | ||    
T  17601683 tagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcacatagaaggctataaatactaccc 17601782  T
Q  664 ttgagaa 670  Q
    |||||||    
T  17601783 ttgagaa 17601789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 14561211 - 14561103
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    ||||| || |||||||||||||||  |||  | ||||||||||||||||||||||| ||||||||||||| |||||  |||||||||||||||||||||     
T  14561211 ctctaaaatcttctagaaaccgccataaatacgtaaatacccctattacttggagaataagcaaccaaaacccaagtccatagaaggctataaataccac 14561112  T
Q  662 ccttgagaa 670  Q
    ||| |||||    
T  14561111 cctcgagaa 14561103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 14566395 - 14566287
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    ||||| || |||||||||||||||  |||  | ||||||||||||||||||||||| |||| |||||||| |||||  |||||||||||||||||||||     
T  14566395 ctctaaaatcttctagaaaccgccataaatacgtaaatacccctattacttggagaataagaaaccaaaacccaagtccatagaaggctataaataccac 14566296  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  14566295 ccttgagaa 14566287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 595 - 667
Target Start/End: Original strand, 17593706 - 17593778
Alignment:
Q  595 taaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttga 667  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  17593706 taaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccacccttga 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 670
Target Start/End: Original strand, 38700161 - 38700273
Alignment:
Q  559 aacctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaata 657  Q
    |||||||||||  |||||||||||||||  |||  | ||||||||||||||||||||||||||||||||||||| |||||| ||||  ||||||||||||    
T  38700161 aacctctagaatgttctagaaaccgcccttaaatacgtaaatacccctattacttggagactaagcaaccaaaacccaagcccataagaggctataaata 38700260  T
Q  658 ccatccttgagaa 670  Q
    ||| |||| ||||    
T  38700261 ccacccttaagaa 38700273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 557 - 671
Target Start/End: Complemental strand, 10813148 - 10813033
Alignment:
Q  557 taaacctctagaaccttctagaaaccgcc-caaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaa 655  Q
    |||| |||||||| |||||||||| |||| | |||  | ||||||||||||||||||| |||||||| |||||||| |||||| ||||||||||||||||    
T  10813148 taaatctctagaatcttctagaaatcgcctctaaatacataaatacccctattacttgaagactaagaaaccaaaacccaagcccatagaaggctataaa 10813049  T
Q  656 taccatccttgagaat 671  Q
    ||||  ||||||||||    
T  10813048 taccgcccttgagaat 10813033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 562 - 631
Target Start/End: Complemental strand, 8857089 - 8857020
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaa 631  Q
    |||||||| |||||||||||||||| |||  | |||||||||||||||||||||||||||||||||||||    
T  8857089 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaa 8857020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 573 - 670
Target Start/End: Complemental strand, 10776996 - 10776899
Alignment:
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||| ||| |||  | |||||||||||||||||||||| ||||||||||||   |||||| ||||||||| ||||||||||| |||||||||    
T  10776996 tctagaaaccaccctaaatacataaatacccctattacttggaggctaagcaaccaaggcccaagcccatagaaggttataaataccacccttgagaa 10776899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 558 - 670
Target Start/End: Complemental strand, 14789864 - 14789750
Alignment:
Q  558 aaacctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcat-agaaggctataaa 655  Q
    |||| ||||||| ||||||||||||||||  |||  | ||||||||||||||||||| |   ||||||||||||| |||||| ||| |||||||||||||    
T  14789864 aaacatctagaatcttctagaaaccgcccttaaatacgtaaatacccctattacttgaaagttaagcaaccaaaacccaagcccataagaaggctataaa 14789765  T
Q  656 taccatccttgagaa 670  Q
    ||||||| |||||||    
T  14789764 taccatcgttgagaa 14789750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 608 - 670
Target Start/End: Complemental strand, 10815997 - 10815935
Alignment:
Q  608 tacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    ||||||||||||||||||| |||| |||||  ||||||||||||||||||||| |||||||||    
T  10815997 tacttggagactaagcaactaaaacccaagtccatagaaggctataaataccacccttgagaa 10815935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 563 - 669
Target Start/End: Complemental strand, 15926858 - 15926752
Alignment:
Q  563 tctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatc 662  Q
    ||||||| | ||||||||||||| ||||  |  |||||||| | || ||||| ||| |||||||||||| |||||| ||||| ||||||||||||||| |    
T  15926858 tctagaaacctctagaaaccgcctaaaatacgcaaatacccatgttgcttggggaccaagcaaccaaaacccaagcccatagcaggctataaataccacc 15926759  T
Q  663 cttgaga 669  Q
    |||||||    
T  15926758 cttgaga 15926752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 565 - 670
Target Start/End: Complemental strand, 19767811 - 19767704
Alignment:
Q  565 tagaaccttctagaaaccgcccaaaagg--cctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatc 662  Q
    ||||| ||||||||||||||||  || |  | ||||||||||||||||||  |  ||||| |||  ||| |||||| |||||||||||||||||||||||    
T  19767811 tagaatcttctagaaaccgcccccaaagtacataaatacccctattacttaaacgctaagtaactgaaacccaagcccatagaaggctataaataccatc 19767712  T
Q  663 cttgagaa 670  Q
    ||||||||    
T  19767711 cttgagaa 19767704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 44712411 - 44712469
Alignment:
Q  356 aagtggaggagaatattgttgtgaagtgtacattacccatggcacttgtgacttaaaatt 415  Q
    ||||||| |||||||||| |||||||||||| ||||| || |||||||||||||||||||    
T  44712411 aagtggaagagaatattggtgtgaagtgtacgttaccaat-gcacttgtgacttaaaatt 44712469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 571 - 615
Target Start/End: Original strand, 14429821 - 14429865
Alignment:
Q  571 cttctagaaaccgcccaaaaggcctaaatacccctattacttgga 615  Q
    ||||||||||||||||||||  ||||||||||||| || ||||||    
T  14429821 cttctagaaaccgcccaaaatacctaaatacccctgttgcttgga 14429865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 626 - 670
Target Start/End: Original strand, 15417785 - 15417829
Alignment:
Q  626 ccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||| |||||| ||||||||| ||||||||||| |||||||||    
T  15417785 ccaaaacccaagcccatagaaggttataaataccacccttgagaa 15417829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 95; Significance: 4e-46; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 470 - 669
Target Start/End: Complemental strand, 14098 - 13889
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataa----------gccgcctttctaa 559  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| | |||||||||||||||||||| |          |||||||| ||||    
T  14098 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaatcccaaaggcccaaggcgcatgattcccagatagccgccttactaa 13999  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    ||||||||||||||||||| | |||||||||  ||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  13998 acctctagaaccttctagagatcgcccaaaatacctaaatacccttattacttggatactaagcaaccaaaacccaagcccatagaaggctataaatacc 13899  T
Q  660 atccttgaga 669  Q
    | ||||||||    
T  13898 acccttgaga 13889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 470 - 665
Target Start/End: Complemental strand, 10611 - 10406
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataa----------gccgcctttctaa 559  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| | |||||||||||||||||||| |          |||||||| ||||    
T  10611 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaatcccaaaggcccaaggcgcatgattcccagatagccgccttactaa 10512  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    ||||||||||||||||||| | |||| ||||  ||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  10511 acctctagaaccttctagagatcgcctaaaatacctaaatacccttattacttggatactaagcaaccaaaacccaagcccatagaaggctataaatacc 10412  T
Q  660 atcctt 665  Q
    | ||||    
T  10411 accctt 10406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 95; Significance: 4e-46; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 470 - 669
Target Start/End: Complemental strand, 15220 - 15011
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataa----------gccgcctttctaa 559  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| |||||||||||||||||||||| |          |||||||| ||||    
T  15220 acctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagcccaaaggcccaaggcgcatgattcccagatagccgccttactaa 15121  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacc 659  Q
    ||||||||||||||||||| | || ||||||  ||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  15120 acctctagaaccttctagagatcgtccaaaatacctaaatacccttattacttggtgactaagcaaccaaaacccaagcccatagaaggctataaatacc 15021  T
Q  660 atccttgaga 669  Q
    | ||||||||    
T  15020 acccttgaga 15011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 470 - 658
Target Start/End: Complemental strand, 19219 - 19021
Alignment:
Q  470 acctccaaaagggctttttaaacccttagaaagggcttagcgtccctgaagagagcccaaaggcccaaggcgcataa----------gccgcctttctaa 559  Q
    |||||||||||||||| ||| ||||| ||||||| || |||| || |||||| ||||||||||||||||||| || |          |||||||| ||||    
T  19219 acctccaaaagggcttcttagaccctcagaaaggactgagcgcccttgaagaaagcccaaaggcccaaggcgtatgattcccagatagccgccttactaa 19120  T
Q  560 acctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    ||||||||||||||||||| | || ||||||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19119 acctctagaaccttctagagatcgtccaaaatacctaaatacccttattacttggagactaagcaaccaaaacccaagctcatagaaggctataaatac 19021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 562 - 667
Target Start/End: Original strand, 12018 - 12123
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  12018 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaatccaagcccatagaaggctataaataccat 12117  T
Q  662 ccttga 667  Q
    ||||||    
T  12118 ccttga 12123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 10968728 - 10968836
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||     
T  10968728 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 10968827  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  10968828 ccttgagaa 10968836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 10754959 - 10755067
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    ||||| || |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||     
T  10754959 ctctaaaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 10755058  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  10755059 ccttgagaa 10755067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 10757236 - 10757344
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||     
T  10757236 ctctagaatcttctagaaaccgccctaaatacataaatacccatattacttggagactaagcaaccaaaacccaagcccatagaaggctacaaataccac 10757335  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  10757336 ccttgagaa 10757344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 10970407 - 10970515
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||     
T  10970407 ctctagaatcttctagaaaccgccctaaatacataaatacccttattacttggagactaagcaaccaaaacccaagcccatagaaggctacaaataccac 10970506  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  10970507 ccttgagaa 10970515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 23878703 - 23878811
Alignment:
Q  562 ctctagaaccttctagaaaccgcc-caaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||| | |||  | ||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  23878703 ctctagaatcttctagaaaccgcctctaaatacataaatacccttattacttggagactaagcaaccgaaacccaagctcatagaa-gctataaatacca 23878801  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  23878802 cccttgagaa 23878811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 565 - 667
Target Start/End: Original strand, 23882354 - 23882457
Alignment:
Q  565 tagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatcc 663  Q
    ||||| ||||||||||||||||  |||  | |||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||| ||    
T  23882354 tagaatcttctagaaaccgcccctaaatacataaatacccctattacttggagtctaagcaaccgaaacccaagcccatagaaggctataaataccaccc 23882453  T
Q  664 ttga 667  Q
    ||||    
T  23882454 ttga 23882457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 27789042 - 27789152
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaag-ctcatagaaggctataaatacc 659  Q
    |||||||| ||||||||||||||||  |||  | |||||| || ||||||||||||||||||||||| ||| ||||| || | | |||||||||||||||    
T  27789042 ctctagaatcttctagaaaccgcccctaaatacataaatagccttattacttggagactaagcaaccgaaacccaagcctaaaaaaaggctataaatacc 27789141  T
Q  660 atccttgagaa 670  Q
    | |||||||||    
T  27789142 acccttgagaa 27789152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 666
Target Start/End: Complemental strand, 36539466 - 36539434
Alignment:
Q  634 caagctcatagaaggctataaataccatccttg 666  Q
    |||||||||| ||||||||||||||||||||||    
T  36539466 caagctcataaaaggctataaataccatccttg 36539434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 562 - 667
Target Start/End: Complemental strand, 10592 - 10487
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||||||    
T  10592 ctctagaatcttctagaaaccgccctaaatgcataaatacccctattacttggagactaagcaaccgaaatccaatcccatagaaggccataaataccat 10493  T
Q  662 ccttga 667  Q
    ||||||    
T  10492 ccttga 10487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1778 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold1778
Description:

Target: scaffold1778; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 1106 - 998
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||| | |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||     
T  1106 ctctaggatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 1007  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  1006 ccttgagaa 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 561 - 670
Target Start/End: Original strand, 4237 - 4346
Alignment:
Q  561 cctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    ||||||||| |||||||||| ||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  4237 cctctagaatcttctagaaatcgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagagggctataaatacca 4336  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  4337 cccttgagaa 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 561 - 670
Target Start/End: Original strand, 7546 - 7655
Alignment:
Q  561 cctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    ||||||||| |||||||||||||| | |||  | ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  7546 cctctagaatcttctagaaaccgcgctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagagggctataaatacca 7645  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  7646 cccttgagaa 7655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 27488 - 27596
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||| |||||| |||| ||| |||||| ||||||||||||||||||||||    
T  27488 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggaaactaagtaaccgaaacccaagcccatagaaggctataaataccat 27587  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  27588 ccttgagaa 27596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 573 - 670
Target Start/End: Original strand, 24840 - 24937
Alignment:
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||||||  |||  | ||||||||||||||||||||| |||||| |||| ||| |||||| ||||||||||||||||||||| |||||||||    
T  24840 tctagaaaccgccttaaatacataaatacccctattacttggaaactaagtaaccgaaacccaagcccatagaaggctataaataccacccttgagaa 24937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 666
Target Start/End: Original strand, 11527320 - 11527424
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||     
T  11527320 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccac 11527419  T
Q  662 ccttg 666  Q
    |||||    
T  11527420 ccttg 11527424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 666
Target Start/End: Original strand, 11544725 - 11544829
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||     
T  11544725 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccac 11544824  T
Q  662 ccttg 666  Q
    |||||    
T  11544825 ccttg 11544829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 15932422 - 15932314
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||||||||||     
T  15932422 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaagacccaagcccataaaaggctataaataccac 15932323  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  15932322 ccttgagaa 15932314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 23532649 - 23532541
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | |||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||     
T  23532649 ctctagaatcttctagaaaccgccctaaatacataaataccactattacttggagactaagcaaccgaaacccaagcccatagaaggctataaataccac 23532550  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  23532549 ccttgagaa 23532541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 34315076 - 34314981
Alignment:
Q  8 gtcaataccatagaagagagcttgatcggcgagttcttgtttggagaagcggcgggcggtagaggggaggtggttggcgcggaggagagaaaggaa 103  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||| || ||||| |||||||||| |||||||||||| |||||    
T  34315076 gtcaataccatagaagagagcttcgtcggcgagttcttgtttggagaagcggcgggcagtggagggaaggtggttggtgcggaggagagagaggaa 34314981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 44356982 - 44357105
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaa 646  Q
    |||||| | ||||| ||||||||  ||||| ||||||||| |||  | ||||||||||||||| ||||||||||||||||||| | |||||| |||||||    
T  44356982 gccgccatactaaatctctagaaatttctataaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaa 44357081  T
Q  647 ggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||||||||    
T  44357082 ggctataaataccacccttgagaa 44357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 573 - 670
Target Start/End: Original strand, 44360128 - 44360225
Alignment:
Q  573 tctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||||||||||| |||  | ||||||||||||||| ||||||||||||||||||| | |||||| |||||||| |||||||||||| |||||||||    
T  44360128 tctagaaaccgccctaaatacataaatacccctattatttggagactaagcaaccaagacccaagcccatagaagactataaataccacccttgagaa 44360225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 562 - 658
Target Start/End: Complemental strand, 23522418 - 23522322
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||||||| |||||||||||| ||| |||  | ||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||    
T  23522418 ctctagaatcttctagaaacctccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaaacccatagaaggctataaatac 23522322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 562 - 666
Target Start/End: Original strand, 11100140 - 11100245
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||||||||||  |||  | |||||||||||||||||||| | ||||| |||  ||| |||||| |||||||||||||||||||||    
T  11100140 ctctagaatcttctagaaaccgcccctaaatacataaatacccctattacttgggggctaagtaactgaaacccaagcccatagaaggctataaatacca 11100239  T
Q  661 tccttg 666  Q
     |||||    
T  11100240 cccttg 11100245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 18941186 - 18941244
Alignment:
Q  356 aagtggaggagaatattgttgtgaagtgtacattacccatggcacttgtgacttaaaatt 415  Q
    |||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||||    
T  18941186 aagtggaggagaatattggtgtgaagtgtacgttaccaat-gcacttgtgacttaaaatt 18941244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 595 - 666
Target Start/End: Complemental strand, 30218130 - 30218059
Alignment:
Q  595 taaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccatccttg 666  Q
    ||||||||||||||||||||   | |||||||| ||| |||||||||||| || |||||||||||| |||||    
T  30218130 taaatacccctattacttgggagccaagcaaccgaaacccaagctcatagcagactataaataccacccttg 30218059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 542
Target Start/End: Complemental strand, 15942496 - 15942386
Alignment:
Q  439 gaaactggaccgtcataatattcctaaaggc------acctccaaaagggctttttaaacccttagaaagggc-ttagcgtccctgaagagagcccaaag 531  Q
    |||| |||||||||||||||||||||| | |      |||||||||||||||| |||  ||| |  ||||||| |||| |||| | ||||||||||||||    
T  15942496 gaaagtggaccgtcataatattcctaaggacctaaaaacctccaaaagggcttcttagtcccctgaaaagggccttagagtccttaaagagagcccaaag 15942397  T
Q  532 gcccaaggcgc 542  Q
    |||||||||||    
T  15942396 gcccaaggcgc 15942386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 669
Target Start/End: Complemental strand, 43173563 - 43173456
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| ||| ||||| ||||| ||||  |  |||||| |||||| |||   ||| |||||||| ||| |||||||||||  |||||||||||||||     
T  43173563 ctctagaatcttatagaatccgcctaaaatacacaaatactcctattgcttaaggaccaagcaaccgaaacccaagctcataacaggctataaataccac 43173464  T
Q  662 ccttgaga 669  Q
    ||||||||    
T  43173463 ccttgaga 43173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 11201185 - 11201137
Alignment:
Q  49 tggagaagcggcgggcggtagaggggaggtggttggcgcggaggagaga 97  Q
    |||||||||||||| || | |||||||||||||||| | ||||||||||    
T  11201185 tggagaagcggcggacgatggaggggaggtggttggtgtggaggagaga 11201137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 3040 - 2931
Alignment:
Q  562 ctctagaaccttctagaaaccgccc-aaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| |||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||     
T  3040 ctctagaatcttctagaaaccgccccaaaatacataaatacccctattacttggagactaagcaaccgaaatccaagcccatacaaggctataaatacct 2941  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  2940 cccttgagaa 2931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 561 - 670
Target Start/End: Original strand, 194589 - 194698
Alignment:
Q  561 cctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    ||||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||    
T  194589 cctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccaaaacccaagcccatagagagctataaatacca 194688  T
Q  661 tccttgagaa 670  Q
     | |||||||    
T  194689 ccattgagaa 194698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 13144 - 13036
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    ||||| || |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||     
T  13144 ctctaaaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaacccaagcccataggaggctataaataccac 13045  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  13044 ccttgagaa 13036  T

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Target: scaffold0208 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 1650 - 1542
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||     
T  1650 ctctagaatcttctagaaaccgccctaaatacataaatacccctattacttggagactaagcaaccgaaactcaagcccatagaaggctataaataccac 1551  T
Q  662 ccttgagaa 670  Q
    |||| ||||    
T  1550 ccttaagaa 1542  T

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Target: scaffold0045 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 78672 - 78780
Alignment:
Q  562 ctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaataccat 661  Q
    |||||||| ||||||||| |||||| |||  | |||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||     
T  78672 ctctagaaacttctagaagccgccctaaatacttaaatgtccctattacttggagactaagcaaccaaaacccaagcccatagaaggctataaataccac 78771  T
Q  662 ccttgagaa 670  Q
    |||||||||    
T  78772 ccttgagaa 78780  T

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Target: scaffold0023 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 547 - 670
Target Start/End: Original strand, 149863 - 149987
Alignment:
Q  547 gccgcctttctaaacctctagaaccttctagaaacc-gcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcataga 645  Q
    |||||| | ||||| |||||||| ||||||||| || |||| |||  | ||||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  149863 gccgccatactaaatctctagaaacttctagaagcccgccctaaatacttaaatgcccctattacttggagactaagcaaccaaaacccaagcccataga 149962  T
Q  646 aggctataaataccatccttgagaa 670  Q
    ||||||||||||||| |||||||||    
T  149963 aggctataaataccacccttgagaa 149987  T

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Target: scaffold0023; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 562 - 670
Target Start/End: Original strand, 146671 - 146780
Alignment:
Q  562 ctctagaaccttctagaaacc-gcccaaaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| ||||||||| || |||| |||  | ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  146671 ctctagaaacttctagaagcccgccctaaatacttaaatgcccctattacttgaagactaagcaaccaaaacccaagctcatagaaggctataaatacca 146770  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  146771 cccttgagaa 146780  T

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Target: scaffold0037 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 20678 - 20569
Alignment:
Q  562 ctctagaaccttctagaaaccgccca-aaaggcctaaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatacca 660  Q
    |||||||| |||||||| |||||||  |||  | |||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  20678 ctctagaatcttctagagaccgcccctaaatacataaataccgctattacttggagactaagcaaccgaaacccaagcccatagaaggctataaatacca 20579  T
Q  661 tccttgagaa 670  Q
     |||||||||    
T  20578 cccttgagaa 20569  T

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Target: scaffold0123 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 658
Target Start/End: Complemental strand, 8850 - 8787
Alignment:
Q  595 taaatacccctattacttggagactaagcaaccaaaatccaagctcatagaaggctataaatac 658  Q
    |||| |||||||||||||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  8850 taaacacccctattacttggagattaagcaaccgaaacccaagcccatagaaggctataaatac 8787  T

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Target: scaffold2018 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold2018
Description:

Target: scaffold2018; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 468
Target Start/End: Original strand, 825 - 853
Alignment:
Q  440 aaactggaccgtcataatattcctaaagg 468  Q
    |||||||||||||||||||||||||||||    
T  825 aaactggaccgtcataatattcctaaagg 853  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 626 - 670
Target Start/End: Complemental strand, 44453 - 44409
Alignment:
Q  626 ccaaaatccaagctcatagaaggctataaataccatccttgagaa 670  Q
    |||||| |||||| ||||||||| ||||||||||| |||||||||    
T  44453 ccaaaacccaagcccatagaaggttataaataccacccttgagaa 44409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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