View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14468_high_10 (Length: 458)
Name: NF14468_high_10
Description: NF14468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14468_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 389; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 13 - 421
Target Start/End: Original strand, 8293438 - 8293846
Alignment:
| Q |
13 |
caaaggttggtgtgccgtcgatgtaattccggctaccggatacgacggtttccgtcataccatcaccataaatcatcacattccatgtattcttatccaa |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8293438 |
caaaggttggtgtgccgtcgatgtaattccggctaccggatacgacggtttccgtcataccatcaccataaatcatcacattccatgtattcttatccaa |
8293537 |
T |
|
| Q |
113 |
atcaatattctctacatacacccctttcttcacatacaccacaaatctctgcagactcttcttcttcaccaacttcaacgcctcgcctattgtcttatac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8293538 |
atcaatattctctacatacacccctttcttcacatacaccacaaatctctgcagactcttcttcttcaccaacttcaacgcctcgcctattgtcttatac |
8293637 |
T |
|
| Q |
213 |
tgtccacttccatccttcgccaccaccgcatccggcactgtctcattcacaaccgtcgcaagcagcctcctctctgccgttcccaaccactccggaaact |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8293638 |
tgtccacttccatccttcgccaccaccgcatccggcactgtttcattcaccaccgtcgcaagcagcctcctctctgccgttcccaaccactccggaaact |
8293737 |
T |
|
| Q |
313 |
ctccgagcaacctaattggtaacaataacaataattagtatacaacaacgcttatacatcaaattaacaatgcttattagattactcttcgactatgaag |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
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| T |
8293738 |
ctccgagcaacctaattggtaacaataacaataattagtatacaacaacgcttatacatcaaattagcaatgcttactagattactcttcgactatgaag |
8293837 |
T |
|
| Q |
413 |
tctggatac |
421 |
Q |
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|||| |||| |
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| T |
8293838 |
tctgaatac |
8293846 |
T |
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