View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14468_high_27 (Length: 280)
Name: NF14468_high_27
Description: NF14468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14468_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 15 - 260
Target Start/End: Complemental strand, 38327942 - 38327697
Alignment:
| Q |
15 |
taggtgaagggataagatcatgttgaaagaattagaaacatcagggataagataaaatgagttcataacagagaaaaacagggatatggaaacaatgaat |
114 |
Q |
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| T |
38327942 |
taggtgaagggataagatcatgttgaaagaattagaaacatcagggataagataaaatgagttcataacagagaaaaacagggatatggaaacaatgaat |
38327843 |
T |
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| Q |
115 |
tcaccttagccactggtgccatctctgctgcaatatgaatcacatataatcctggactaaagataaaaagtaagggatgcataagataatggaagatata |
214 |
Q |
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| T |
38327842 |
tcaccttagccactggtgccatctctgctgcaatatgaatcacatataatcctggactaaagataaaaagtaagggatgcataagataatggaagatata |
38327743 |
T |
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| Q |
215 |
taaaatgcaacacacaattagaatttaatacctcgttgcagacgat |
260 |
Q |
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| T |
38327742 |
taaaatgcaacacacaattagaatttaatacctcgttgcagacgat |
38327697 |
T |
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