View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14468_low_25 (Length: 350)

Name: NF14468_low_25
Description: NF14468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14468_low_25
NF14468_low_25
[»] chr5 (25 HSPs)
chr5 (275-350)||(9738017-9738092)
chr5 (265-350)||(614416-614501)
chr5 (273-350)||(11856314-11856391)
chr5 (265-350)||(42119641-42119726)
chr5 (265-349)||(39862511-39862594)
chr5 (275-350)||(8456997-8457072)
chr5 (275-350)||(10081164-10081239)
chr5 (265-350)||(6174764-6174850)
chr5 (265-344)||(10115185-10115264)
chr5 (275-350)||(23218505-23218579)
chr5 (275-350)||(37169067-37169141)
chr5 (275-350)||(38397618-38397692)
chr5 (277-350)||(25560363-25560436)
chr5 (275-350)||(15631633-15631708)
chr5 (265-349)||(27916160-27916244)
chr5 (275-350)||(16618604-16618678)
chr5 (275-350)||(29491448-29491521)
chr5 (275-349)||(6257444-6257517)
chr5 (265-350)||(36769098-36769182)
chr5 (265-350)||(29790243-29790326)
chr5 (275-349)||(33271304-33271377)
chr5 (273-347)||(10052532-10052606)
chr5 (277-329)||(19322058-19322110)
chr5 (283-350)||(3341162-3341228)
chr5 (277-350)||(15475430-15475503)
[»] chr3 (28 HSPs)
chr3 (265-350)||(43347360-43347445)
chr3 (273-350)||(10839412-10839489)
chr3 (275-350)||(13856119-13856193)
chr3 (275-350)||(20382538-20382613)
chr3 (273-350)||(1781781-1781858)
chr3 (265-350)||(8926785-8926870)
chr3 (265-350)||(54546924-54547008)
chr3 (275-350)||(19649406-19649482)
chr3 (275-350)||(5391477-5391551)
chr3 (265-350)||(8950528-8950612)
chr3 (265-350)||(48206873-48206957)
chr3 (275-350)||(21853217-21853291)
chr3 (275-350)||(23467528-23467602)
chr3 (275-350)||(40845951-40846025)
chr3 (277-350)||(33103763-33103835)
chr3 (277-349)||(22845398-22845469)
chr3 (277-350)||(36539651-36539724)
chr3 (275-350)||(44995002-44995077)
chr3 (275-350)||(3178723-3178797)
chr3 (275-350)||(32352867-32352941)
chr3 (265-348)||(51336231-51336313)
chr3 (277-350)||(46685819-46685891)
chr3 (277-333)||(791850-791906)
chr3 (275-346)||(47889748-47889820)
chr3 (274-350)||(6280392-6280467)
chr3 (275-350)||(19644361-19644438)
chr3 (296-339)||(54378613-54378656)
chr3 (265-305)||(27642724-27642764)
[»] chr1 (28 HSPs)
chr1 (265-350)||(10907672-10907757)
chr1 (262-350)||(30252765-30252854)
chr1 (273-350)||(30745363-30745440)
chr1 (273-350)||(30766814-30766891)
chr1 (265-350)||(23908305-23908389)
chr1 (265-350)||(38859870-38859955)
chr1 (275-350)||(3346806-3346880)
chr1 (271-345)||(5558334-5558407)
chr1 (265-350)||(7742803-7742887)
chr1 (265-346)||(26835361-26835442)
chr1 (275-350)||(48392440-48392514)
chr1 (265-350)||(10156040-10156124)
chr1 (265-350)||(44107412-44107497)
chr1 (275-350)||(29149582-29149656)
chr1 (275-350)||(49902488-49902562)
chr1 (276-350)||(5975008-5975081)
chr1 (274-348)||(26511666-26511739)
chr1 (302-350)||(8430502-8430550)
chr1 (275-350)||(42517328-42517406)
chr1 (265-350)||(13131916-13132000)
chr1 (265-350)||(14796895-14796980)
chr1 (265-350)||(14805769-14805854)
chr1 (275-350)||(47022722-47022796)
chr1 (305-350)||(37189322-37189367)
chr1 (265-350)||(42456591-42456676)
chr1 (269-350)||(45968687-45968767)
chr1 (275-312)||(37189697-37189734)
chr1 (273-349)||(44462510-44462589)
[»] chr4 (28 HSPs)
chr4 (276-350)||(322584-322658)
chr4 (262-349)||(35322725-35322812)
chr4 (273-343)||(10094425-10094495)
chr4 (265-350)||(9742557-9742642)
chr4 (265-350)||(17888574-17888659)
chr4 (265-347)||(16338237-16338318)
chr4 (273-349)||(12792263-12792339)
chr4 (275-350)||(1535791-1535865)
chr4 (275-350)||(20818586-20818661)
chr4 (275-350)||(34241013-34241087)
chr4 (275-350)||(52632538-52632612)
chr4 (265-350)||(25954770-25954854)
chr4 (275-350)||(31377409-31377484)
chr4 (275-350)||(35018956-35019030)
chr4 (275-350)||(36012219-36012293)
chr4 (275-350)||(37801298-37801372)
chr4 (275-350)||(46583575-46583649)
chr4 (275-350)||(49284377-49284451)
chr4 (265-350)||(46474013-46474098)
chr4 (265-350)||(50328815-50328900)
chr4 (273-325)||(47084056-47084108)
chr4 (265-350)||(19124762-19124847)
chr4 (277-333)||(5780790-5780846)
chr4 (273-344)||(54090206-54090276)
chr4 (308-350)||(24991972-24992014)
chr4 (275-350)||(11054472-11054550)
chr4 (308-350)||(16338311-16338352)
chr4 (277-321)||(33982052-33982096)
[»] chr6 (14 HSPs)
chr6 (265-350)||(28750674-28750759)
chr6 (265-346)||(13103142-13103223)
chr6 (275-350)||(14309832-14309906)
chr6 (273-350)||(27863719-27863795)
chr6 (265-350)||(34103705-34103789)
chr6 (275-350)||(9231888-9231962)
chr6 (275-350)||(11279560-11279634)
chr6 (275-350)||(24694685-24694759)
chr6 (275-350)||(11212691-11212765)
chr6 (275-350)||(13627560-13627634)
chr6 (275-344)||(1727967-1728035)
chr6 (308-350)||(24500767-24500809)
chr6 (265-305)||(24497598-24497638)
chr6 (302-348)||(7517037-7517083)
[»] chr8 (17 HSPs)
chr8 (275-350)||(26021415-26021490)
chr8 (265-350)||(43282875-43282960)
chr8 (275-350)||(21525378-21525452)
chr8 (275-350)||(42072448-42072522)
chr8 (275-350)||(22324616-22324690)
chr8 (275-350)||(35806814-35806888)
chr8 (265-350)||(21488086-21488170)
chr8 (265-350)||(33934393-33934477)
chr8 (262-350)||(19334802-19334890)
chr8 (275-350)||(24065293-24065367)
chr8 (275-350)||(42013892-42013966)
chr8 (265-350)||(10112066-10112151)
chr8 (283-350)||(34697431-34697498)
chr8 (274-325)||(2271239-2271290)
chr8 (275-320)||(16523155-16523200)
chr8 (275-349)||(16819007-16819083)
chr8 (308-341)||(23756566-23756599)
[»] chr7 (18 HSPs)
chr7 (265-350)||(29555963-29556047)
chr7 (275-349)||(19334594-19334669)
chr7 (275-350)||(32876564-32876638)
chr7 (275-350)||(33057691-33057766)
chr7 (275-350)||(10576693-10576767)
chr7 (275-350)||(34259538-34259612)
chr7 (275-350)||(34707136-34707210)
chr7 (275-350)||(44164777-44164851)
chr7 (276-350)||(24320474-24320547)
chr7 (265-350)||(10334197-10334282)
chr7 (275-350)||(29238177-29238251)
chr7 (275-350)||(29981147-29981221)
chr7 (265-350)||(17303138-17303224)
chr7 (274-347)||(9770682-9770754)
chr7 (265-325)||(15017817-15017877)
chr7 (277-344)||(41853158-41853226)
chr7 (302-349)||(23032186-23032233)
chr7 (296-347)||(26284433-26284483)
[»] chr2 (20 HSPs)
chr2 (275-350)||(1387322-1387396)
chr2 (275-350)||(29846462-29846536)
chr2 (265-350)||(19181568-19181652)
chr2 (277-350)||(40277324-40277396)
chr2 (273-349)||(14539736-14539812)
chr2 (275-345)||(6318492-6318563)
chr2 (275-350)||(14942078-14942152)
chr2 (275-350)||(42769792-42769866)
chr2 (265-350)||(40780074-40780160)
chr2 (277-350)||(23685406-23685479)
chr2 (262-350)||(33009691-33009780)
chr2 (275-350)||(14186472-14186546)
chr2 (273-349)||(41674738-41674815)
chr2 (277-349)||(43139766-43139839)
chr2 (265-349)||(28321727-28321811)
chr2 (277-348)||(3597903-3597973)
chr2 (275-345)||(3956596-3956666)
chr2 (277-349)||(25665244-25665316)
chr2 (293-349)||(32486264-32486320)
chr2 (275-350)||(2888060-2888135)
[»] scaffold0079 (2 HSPs)
scaffold0079 (265-347)||(54542-54623)
scaffold0079 (308-350)||(54508-54549)
[»] scaffold0045 (1 HSPs)
scaffold0045 (273-350)||(34484-34561)
[»] scaffold0086 (1 HSPs)
scaffold0086 (265-326)||(20855-20916)
[»] scaffold0016 (1 HSPs)
scaffold0016 (277-322)||(85547-85592)


Alignment Details
Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 9738017 - 9738092
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  9738017 tgaatttcttatataaatccctataaattggacaatttctttagattttttgtttatttgcttgcaatttcttatg 9738092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 614416 - 614501
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||| ||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||    
T  614416 taaattcctctgaattttttatataaatccctataaatttggcaatttctttagatttttttattatttgcttgcaatttcttatg 614501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 11856391 - 11856314
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  11856391 tctgaatttcttatataaatcactataaattgggcaatttctttagattttttgattatttacttgcaatttcttatg 11856314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 42119726 - 42119641
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||    
T  42119726 taaattcctctgaatttcttatataaacctctataaattggacaatttctttagatttttttattatttgtttgtaatttcttatg 42119641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 39862511 - 39862594
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||||| | ||||||||||||||||| |||||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  39862511 taaattcctatgaatttcttatataaacccctataaattgggcaatttctttagatttttt-attatttgcttgcaatttcttat 39862594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 8456997 - 8457072
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||  |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  8456997 tgaatttcttatataaccccctataaattgggcaatttctttagatttttttattatttgcttgcaatttcttatg 8457072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 10081239 - 10081164
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||    
T  10081239 tgaatttcttatataaacccctataaattgggcaatttctttagatttttttattatttgcttacaatttcttatg 10081164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 6174850 - 6174764
Alignment:
Q  265 taaattcttctgaatttcttatataaa--tccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||||||||||||   |||||||||||||| |||||||||| ||||||| ||||||||||||||||||| ||||    
T  6174850 taaattcttctgaatttcttatataaacccccctataaattggacaatttctttatatttttt-attatttgcttgcaatttcctatg 6174764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 10115264 - 10115185
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaattt 344  Q
    ||||||| |||| |||||||||||||| ||| ||||||| || |||||||||||||||||| ||||||||||||||||||    
T  10115264 taaattcctctggatttcttatataaaccccaataaattagacaatttctttagattttttaattatttgcttgcaattt 10115185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 23218579 - 23218505
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  23218579 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 23218505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 37169067 - 37169141
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  37169067 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 37169141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 38397692 - 38397618
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  38397692 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 38397618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 25560363 - 25560436
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||   |||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  25560363 aatttcttatataaacatctataaattggacaatttctttagattattttattatttgcttgcaatttcttatg 25560436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 15631708 - 15631633
Alignment:
Q  275 tgaatttcttatataaatccc-tataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  15631708 tgaatttcttatataaaccccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 15631633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 27916244 - 27916160
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||||| |||||||||||||||||||  |||||||||||   |||||| ||||||||||| |||||||| ||||||||||||||    
T  27916244 taaattcctctgaatttcttatataaactcctataaattgagcaatttcattagatttttttattatttgtttgcaatttcttat 27916160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 16618604 - 16618678
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||  ||||||||||||| ||||| |||| ||||||| ||||||||||||||||||||||||    
T  16618604 tgaatttcttatataaactcctataaattggacaatttttttatatttttt-attatttgcttgcaatttcttatg 16618678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 29491448 - 29491521
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||  |||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  29491448 tgaatttcttatataac-ccctataaattggacaatt-ctttaaattttttgattatttgcttgcaatttcttatg 29491521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 6257444 - 6257517
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||| ||| |||||||||||||  |||||||||| ||||||| |||||||||||||||||||||||    
T  6257444 tgaatttcttatacaaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttat 6257517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 36769098 - 36769182
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||||||||||| | |||| |||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  36769098 taaattcctctgaatttcttatataaacctctatgaattaggcaatttctttaga-tttttgattatttgcttgcaatttcatatg 36769182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 29790243 - 29790326
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||| ||||||||||||||||| |  ||||||||||  |||||||||||  |||||||||||||||||  |||||||||||    
T  29790243 taaattcttatgaatttcttatataaacctttataaattgggcaatttctttag--tttttgattatttgcttttaatttcttatg 29790326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 33271304 - 33271377
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||||||| | |||||||||||| |||||||||| ||||||| |||||||| ||| ||||||||||    
T  33271304 tgaatttcttatataaacctctataaattggacaatttctttatatttttt-attatttgtttgtaatttcttat 33271377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 10052532 - 10052606
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttctt 347  Q
    |||||| | ||||||||||   ||||||||| | ||||||||||| | |||| ||||||||||||||||||||||    
T  10052532 tctgaactacttatataaacgtctataaattaggtaatttctttaaaattttagattatttgcttgcaatttctt 10052606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 19322058 - 19322110
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgatt 329  Q
    |||||||||||||||  ||||||||||||  |||| |||||||||||||||||    
T  19322058 aatttcttatataaactcctataaattgggcaattactttagattttttgatt 19322110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 3341162 - 3341228
Alignment:
Q  283 ttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||  |||||||||||||  |||||||||||  ||||||||||||||||| |||||| |||||    
T  3341162 ttatataatcccctataaattgggaaatttctttag-ctttttgattatttgctttcaattttttatg 3341228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 15475430 - 15475503
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||| |||||||||||  ||||||||| | |||||||||| ||||||  ||||||| || | |||||||||||    
T  15475430 aattttttatataaatctatataaattgaaaaatttctttaaatttttgtattattttctcgtaatttcttatg 15475503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 43347360 - 43347445
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  43347360 taaattcctctgaatttcttatataaacccctacaaattgggcaatttctttagattttttgattatttgcttgcaatttcttatg 43347445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 350
Target Start/End: Original strand, 10839412 - 10839489
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||||| | |||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  10839412 tctgaatttcttatataaacctctataaattgggcaatttctttagattttttgattatttgcttgcaatttcttatg 10839489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 13856193 - 13856119
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  13856193 tgaatttcttatataaatccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 13856119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 20382613 - 20382538
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  20382613 tgaatttcttatataaacccctataaattgggaaatttctttagatttttttattatttgcttgcaatttcttatg 20382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 1781858 - 1781781
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  1781858 tctgaatttcttatataaaccccaataaattgggcaatttctttagattttttgattatttgcttgcaatttcgtatg 1781781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 8926870 - 8926785
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||| ||||||| ||||||||||| |  ||||||| |||||||||||||||||||||||||||||||||||    
T  8926870 taaattcctctgaatttctgatataaacccctataaatttggcaatttctgtagattttttgattatttgcttgcaatttcttatg 8926785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 54547008 - 54546924
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  54547008 taaattcctttgaatttcttatataaacccctataaattggacaatttctttagat-ttttgattatttgcttacaatttcttatg 54546924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 19649406 - 19649482
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagatttttt-gattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  19649406 tgaatttcttatataaacccttataaattggacaatttctttagattttttggattatttgcttgcaatttcttatg 19649482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 5391551 - 5391477
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  5391551 tgaatttcttatataaacccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 5391477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 8950528 - 8950612
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | |||||||||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||| |||||||||||    
T  8950528 taaattcctatgaatttcttatataaatccctataaattgggcaatttctttacatttttt-attatttgcttgaaatttcttatg 8950612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 48206957 - 48206873
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||| |||||||||| ||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||    
T  48206957 taaattcctctgaatt-cttatataaacccctataaatttgacaatttttttagattttttgattatttacttgcaatttcttatg 48206873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 21853291 - 21853217
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  21853291 tgaatttcttatataaaaccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 21853217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 23467528 - 23467602
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  23467528 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 23467602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 40845951 - 40846025
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  40845951 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 40846025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 33103835 - 33103763
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||||    
T  33103835 aatttcttatataagtccctataaattggataatttatttaaatttttt-attatttgcttgtaatttcttatg 33103763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 349
Target Start/End: Original strand, 22845398 - 22845469
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||||||||||| ||||    
T  22845398 aatttcttatataaacccctataaatttgacaatttctttagatttttt-attatttgcttgcaattttttat 22845469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 350
Target Start/End: Complemental strand, 36539724 - 36539651
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||  |||||||||||||  |||||||||| |||||||||||||||| |||||||||| ||||    
T  36539724 aatttcttatataatcccctataaattgggcaatttctttaaattttttgattatttgtttgcaatttcctatg 36539651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 44995002 - 44995077
Alignment:
Q  275 tgaatttcttatataaatccct-ataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||| |||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  44995002 tgaatttcttatataaaccccttataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 44995077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 3178797 - 3178723
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||||| |||||||||||  ||||||||||| ||||||  |||||||||||||||||| ||||    
T  3178797 tgaatttcttatataaatctctataaattgggcaatttctttag-ttttttttttatttgcttgcaatttcgtatg 3178723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 32352941 - 32352867
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| ||||||||||| |  |||||||||| ||||||| ||||||||||| ||||||||||||    
T  32352941 tgaatttcttatataaacccctataaattaggcaatttctttacatttttt-attatttgcttacaatttcttatg 32352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 51336313 - 51336231
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttctta 348  Q
    |||||||| |||||||| |||||||||||  |||||||| || |||||||||| ||||||| ||||||| ||||||||||||||    
T  51336313 taaattctcctgaattttttatataaatctttataaatttgacaatttctttaaatttttt-attatttacttgcaatttctta 51336231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 46685819 - 46685891
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||  |||||||||| || |||||||||| ||||||| |||||||| |||||||||||||||    
T  46685819 aatttcttatataaactcctataaatttgacaatttctttatatttttt-attatttgtttgcaatttcttatg 46685891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 791906 - 791850
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattattt 333  Q
    |||||||||||||||| |||||||||||  ||||||||||| |||||||||||||||    
T  791906 aatttcttatataaattcctataaattgcgtaatttctttatattttttgattattt 791850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 275 - 346
Target Start/End: Complemental strand, 47889820 - 47889748
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttg-caatttct 346  Q
    |||||||||||||||||| ||||||||||||  |||||||||| ||||||| ||||||| |||| ||||||||    
T  47889820 tgaatttcttatataaattcctataaattgggcaatttctttaaatttttttattatttacttgacaatttct 47889748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 350
Target Start/End: Original strand, 6280392 - 6280467
Alignment:
Q  274 ctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||| | ||||||||| || ||||| |||||| |||||||| |||||||||| |||| |||||    
T  6280392 ctgaatttcttatataaacctctataaatttgacaatttatttaga-tttttgataatttgcttgccattttttatg 6280467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 19644361 - 19644438
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttcttt-agattttttg-attatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||||  ||||||||| | ||||| ||| |||||||||| |||||||| |||||||||||||||    
T  19644361 tgaattttttatataaatctttataaattgaacaattttttttagattttttggattatttgattgcaatttcttatg 19644438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 54378656 - 54378613
Alignment:
Q  296 tataaattggataatttctttagattttttgattatttgcttgc 339  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||    
T  54378656 tataaattggacaatttatttagattttttgattatttgtttgc 54378613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 27642764 - 27642724
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattgg 305  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  27642764 taaatccttttgaatttcttatataaatccttataaattgg 27642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 10907672 - 10907757
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  10907672 taaattcctctgaatttcttatataaacccctataaatcagacaatttctttagattttttgattatttgcttgcaatttcttatg 10907757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 30252765 - 30252854
Alignment:
Q  262 atataaattcttctgaatttctt-atataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||| |||||||||| || ||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||    
T  30252765 atataaatttttctgaatttttttatataaatccctataaattagacaacttctttagattttttgattatttgcttgcaatttcttatg 30252854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 30745440 - 30745363
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  30745440 tctgaatttcttttataaatccctataaattggacaatttctttaaattttttgattatttacttgcaatttcttatg 30745363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 30766891 - 30766814
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  30766891 tctgaatttcttttataaatccctataaattggacaatttctttaaattttttgattatttacttgcaatttcttatg 30766814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 23908389 - 23908305
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | |||||||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||    
T  23908389 taaattcctatgaatttcttatataaatccctataaattggacaatttctttatgtttttt-attatttgcttgcaatttcttatg 23908305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 38859955 - 38859870
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||| |||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||||    
T  38859955 taaattcctatgaatttcttatataaacccctataaattgggcaatttttttagatttttttattatttgcttgcaatttcttatg 38859870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 3346880 - 3346806
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  3346880 tgaatttcttatataaacccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 3346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 5558407 - 5558334
Alignment:
Q  271 cttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttc 345  Q
    |||| |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  5558407 cttccgaatttcttatataaacccctataaattggacaatttctttagat-ttttgattatttgcttgcaatttc 5558334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 7742803 - 7742887
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||| ||| ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  7742803 taaatccttatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 7742887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 26835442 - 26835361
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttct 346  Q
    ||||||| | |||||||||||||||||  ||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  26835442 taaattcatatgaatttcttatataaactcctataaattgaacaatttttttagattttttgattatttgcttgcaatttct 26835361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 48392440 - 48392514
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||||||||||||||||  |||||| ||| ||||||| ||||||||||||||||||||||||    
T  48392440 tgaatttcttatataaatccctataaattgggcaatttcattacatttttt-attatttgcttgcaatttcttatg 48392514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 10156040 - 10156124
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | |||||||||||||||||   |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  10156040 taaattcctatgaatttcttatataaacttctataaattggacaatttctttatatttttt-attatttgcttgcaatttcttatg 10156124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 44107412 - 44107497
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||| ||| ||||||||| |||||||||||   ||||||||| ||||||||||||||||| ||||||||||||||||    
T  44107412 taaattcctctgatttttttatataaacccctataaattaattaatttcttcagattttttgattatttacttgcaatttcttatg 44107497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 29149582 - 29149656
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  ||||||||||  |||||| ||||||||||||||||||||||||    
T  29149582 tgaatttcttatataaacccctataaattgggcaatttctttacgtttttt-attatttgcttgcaatttcttatg 29149656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 49902562 - 49902488
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||| ||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  49902562 tgaatttcttatataaacccctataaatagggcaatttctttacatttttt-attatttgcttgcaatttcttatg 49902488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 350
Target Start/End: Complemental strand, 5975081 - 5975008
Alignment:
Q  276 gaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||| ||||||||||| |  |||||||||| ||||||| ||||||||||||||||||||||||    
T  5975081 gaatttcttatataaacccctataaattaggcaatttctttacatttttt-attatttgcttgcaatttcttatg 5975008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 26511666 - 26511739
Alignment:
Q  274 ctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttctta 348  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||| | ||||||||||||| ||| ||||||||||    
T  26511666 ctgaatttcttatataaattcctgtaaattgaataatttcttta-aatttttgattatttacttacaatttctta 26511739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 8430502 - 8430550
Alignment:
Q  302 ttggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8430502 ttggataatttctttaaatttttttattatttgcttgcaatttcttatg 8430550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 42517328 - 42517406
Alignment:
Q  275 tgaatttcttatataaat----ccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||     |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  42517328 tgaatttcttatataaacaaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 42517406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 13132000 - 13131916
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||| ||||| ||||||||||| |||||||||||| |||||||||||  |||||  |||| | ||||||||||||||||    
T  13132000 taaattcctctaaattttttatataaatcactataaattggacaatttctttag-ctttttacttatctccttgcaatttcttatg 13131916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 14796980 - 14796895
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||||||||| |  | |||||||| |   ||| |||||||||||| || ||||||||||||||||||||||    
T  14796980 taaattcctctgaatttcttatatacacacttataaattaggccattactttagatttttcgaatatttgcttgcaatttcttatg 14796895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 14805854 - 14805769
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||||||||| |  | |||||||| |   ||| |||||||||||| || ||||||||||||||||||||||    
T  14805854 taaattcctctgaatttcttatatacacacttataaattaggccattactttagatttttcgaatatttgcttgcaatttcttatg 14805769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 47022796 - 47022722
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||  |||||||||| |  |||||||||| ||||||| ||||||| |||| |||||||||||    
T  47022796 tgaatttcttatataaactcctataaattaggcaatttctttatatttttt-attatttacttgtaatttcttatg 47022722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 350
Target Start/End: Complemental strand, 37189367 - 37189322
Alignment:
Q  305 gataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||    
T  37189367 gataatttatttaaattttttgattatttgtttgcaatttcttatg 37189322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 42456676 - 42456591
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||| |||||||||||||  |||||||||| |    || ||||| | ||||||||||||||||    
T  42456676 taaattcctatgaatttcttatataaacccctataaattgggcaatttctttaaaaaaatttattatctacttgcaatttcttatg 42456591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 45968767 - 45968687
Alignment:
Q  269 ttcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||| |||||||| ||||||||   | ||||||||||| ||||| | ||||||||| |||||||| ||||||||||||||||    
T  45968767 ttctcctgaattttttatataatctcttataaattggacaatttttatagattttt-gattatttacttgcaatttcttatg 45968687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 37189734 - 37189697
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataattt 312  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  37189734 tgaatttcttatataaatctctataaattggacaattt 37189697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 44462510 - 44462589
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttaga---ttttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||||| ||| | ||||||||| || ||||||||  ||   |||||||||||||| |||||| ||||||||    
T  44462510 tctgaatttcttatacaaacctctataaattagacaatttcttctgatttttttttgattatttacttgcagtttcttat 44462589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 276 - 350
Target Start/End: Original strand, 322584 - 322658
Alignment:
Q  276 gaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  322584 gaatttcttatataaacccctataaattggacaatttctttaaattttttgattatttgcttgcaatttcttatg 322658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 349
Target Start/End: Original strand, 35322725 - 35322812
Alignment:
Q  262 atataaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    |||||||||  ||||||| ||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  35322725 atataaatttctctgaatctcttatataaacctctataaattgaacaatttctttagattttttgattatttgcttgcaatttcttat 35322812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 273 - 343
Target Start/End: Original strand, 10094425 - 10094495
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatt 343  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  10094425 tctgaatttcttatataaacccctataaattgggtaatttatttagattttttgattatttgcttgcaatt 10094495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 9742557 - 9742642
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||||||||| || |||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||    
T  9742557 taaattcctctgaatttcttatattaacccctataaattgggcaatttctttagattttttgattattttcatgcaatttcttatg 9742642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 17888574 - 17888659
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||  |||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  17888574 taaattcctatgaatttcttatataaccccctataaattgggcaatttctttagatttttttattatttgcttgcaatttcttatg 17888659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 16338237 - 16338318
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttctt 347  Q
    ||||||| | ||||||| |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  16338237 taaattcctatgaattttttatataaatccctataaattggacaatttctttacatttttt-attatttgcttgcaatttctt 16338318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 12792263 - 12792339
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||||||||| |||||||||||||  |||| |||||||||||| ||||||||||||| ||||||||||    
T  12792263 tctgaatttcttatataaacccctataaattgggcaattactttagatttttagattatttgcttgaaatttcttat 12792339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 1535865 - 1535791
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  1535865 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 1535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 20818661 - 20818586
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||  ||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||    
T  20818661 tgaatttcttatataaactcctataaattggtcaatttttttagattttttgattatttgtttgcaatttcttatg 20818586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 34241087 - 34241013
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  34241087 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 34241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 52632612 - 52632538
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||    
T  52632612 tgaatttcttatataaatccctataaattgggcaatttctttacatttttt-aatatttgcttgcaatttcttatg 52632538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 25954854 - 25954770
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | |||||||||||||||||  ||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  25954854 taaattcctatgaatttcttatataaactcctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 25954770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 31377484 - 31377409
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||  | |||||||||||  |||||||||||||||||| | ||||||||||||||||||||||    
T  31377484 tgaatttcttatataaccctctataaattgggcaatttctttagattttttaactatttgcttgcaatttcttatg 31377409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 35019030 - 35018956
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| || |||||||| | ||||||||||| ||||||| ||||||||||||||||||||||||    
T  35019030 tgaatttcttatataaacccttataaattaggtaatttctttacatttttt-attatttgcttgcaatttcttatg 35018956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 36012219 - 36012293
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| |||||||||||||||||| |||||    
T  36012219 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaattttttatg 36012293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 37801298 - 37801372
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||||||||||||||||  || ||||||| ||||||| ||||||||||||||||||||||||    
T  37801298 tgaattttttatataaatccctataaattgggcaaattctttacatttttt-attatttgcttgcaatttcttatg 37801372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 46583575 - 46583649
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| ||||||||||| |  |||||||||| ||||||| ||||||||||||||||||||||||    
T  46583575 tgaatttcttatataaacccctataaattaggcaatttctttacatttttt-attatttgcttgcaatttcttatg 46583649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 49284451 - 49284377
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| |||||||| |||||||||||||||    
T  49284451 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgtttgcaatttcttatg 49284377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 46474098 - 46474013
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||| ||||||||| || ||||||||| | |||||||||||||||||  |||||||||||| |||||||||||    
T  46474098 taaattcctgtgaattttttatataaacccatataaattgtacaatttctttagatttttgtattatttgcttgtaatttcttatg 46474013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 50328900 - 50328815
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||| ||||||||||||||| | |||||||||||| |||||||||| ||||||| ||||||  |||||||||| |||||    
T  50328900 taaattcctcttaatttcttatataaacctctataaattggacaatttctttaaatttttttattattcacttgcaattttttatg 50328815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 47084108 - 47084056
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagatttttt 325  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  47084108 tctgaatttcttatataaacccctataaattgggtaatttctttagatttttt 47084056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 19124762 - 19124847
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||||||||||||   || |||||||   |||||||||| ||||||| ||||||| ||| ||||||||||||    
T  19124762 taaattcctctgaatttcttatataaacatctgtaaattgatcaatttctttaaatttttttattatttacttacaatttcttatg 19124847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 5780790 - 5780846
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattattt 333  Q
    |||||||||||||||||| ||||||||||  |||||||||| ||||||| |||||||    
T  5780790 aatttcttatataaatccttataaattgggcaatttctttaaatttttttattattt 5780846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 54090276 - 54090206
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaattt 344  Q
    ||||||||| |||||||||  | ||||||||||  ||||| |||||||||||| ||||||||||||||||||    
T  54090276 tctgaatttattatataaactcttataaattgggcaatttttttagatttttt-attatttgcttgcaattt 54090206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 24992014 - 24991972
Alignment:
Q  308 aatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  24992014 aatttctttagattttatgattatttgctggcaatttcttatg 24991972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 11054550 - 11054472
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttag---attttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| | |||||||||||  ||| |||||||    ||||||  |||||||||||||||||||||||    
T  11054550 tgaatttcttatataaacctctataaattgggcaatctctttagtattttttttatttatttgcttgcaatttcttatg 11054472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 16338311 - 16338352
Alignment:
Q  308 aatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  16338311 aatttctttacatttttt-attatttgcttgcaatttcttatg 16338352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 33982096 - 33982052
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagatt 321  Q
    |||||||||||||||  | |||||||| |||||||||||||||||    
T  33982096 aatttcttatataaactcttataaattagataatttctttagatt 33982052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 28750674 - 28750759
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||||||  ||||||||||||||||||| |||||||||||    
T  28750674 taaattcttctgaatttcttatataaacccctataaattgggcaatttctttaatttttttgattatttgcttgtaatttcttatg 28750759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 13103142 - 13103223
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttct 346  Q
    ||||||| ||||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13103142 taaattcctctgaatttcttatataaacctttataaattgggcaatttctttagattttttgattatttgcttgcaatttct 13103223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 14309832 - 14309906
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  14309832 tgaatttcttatataaatccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 14309906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 27863795 - 27863719
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  27863795 tctgaatttcttatataaacccttataaattggacaatttctttagatttttt-attatttgtttgcaatttcttatg 27863719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 34103789 - 34103705
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||||||||||||||||||| || ||||||||||  |||||||||||||||||| |||||||| |||||||||||||||    
T  34103789 taaattcctctgaatttcttatataaacccgtataaattgggaaatttctttagatttttt-attatttgtttgcaatttcttatg 34103705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 9231888 - 9231962
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  9231888 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 9231962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 11279634 - 11279560
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||| | |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  11279634 tgaattttttatataaattcttataaatttggtaatttctttagatttttt-attatttgcttgcaatttcttatg 11279560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 24694685 - 24694759
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||  ||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  24694685 tgaatttcttatataaactcctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 24694759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 11212765 - 11212691
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| || ||||||||||||||||||||  ||||||||||||| |||| |||||||||||| |||||||||||    
T  11212765 tgaattttttctataaatccctataaattgggcaatttctttagat-ttttaattatttgcttgtaatttcttatg 11212691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 13627634 - 13627560
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| ||||||||||||   |||||||||| ||||||| |||||||||||| | |||||||||    
T  13627634 tgaatttcttatataaacccctataaattgagcaatttctttacatttttt-attatttgcttgtactttcttatg 13627560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 1727967 - 1728035
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaattt 344  Q
    ||||||||||||||||| ||||||||||||   |||||||||| ||||||| ||||||| ||||||||||    
T  1727967 tgaatttcttatataaacccctataaattgagcaatttctttacatttttt-attatttccttgcaattt 1728035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 24500767 - 24500809
Alignment:
Q  308 aatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  24500767 aatttctttagatttttttattatttgcttgcaatttcatatg 24500809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 24497598 - 24497638
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattgg 305  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  24497598 taaattcctctgaatttcttatataaacccctataaattgg 24497638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 7517083 - 7517037
Alignment:
Q  302 ttggataatttctttagattttttgattatttgcttgcaatttctta 348  Q
    ||||| ||||| |||||||||||| || |||||||||||||||||||    
T  7517083 ttggacaatttttttagatttttttatcatttgcttgcaatttctta 7517037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 26021490 - 26021415
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  26021490 tgaatttcttatataaacccctataaattgggtaatttctttacatttttttattatttgcttgcaatttcttatg 26021415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 43282875 - 43282960
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||  |||| ||||||||||||| ||||||||||    
T  43282875 taaattcttctgaatttattatataaatccctataaattgggtaatttcattagaaatttttattatttgcttgctatttcttatg 43282960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 21525452 - 21525378
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  21525452 tgaatttcttatataaacccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 21525378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 42072522 - 42072448
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  42072522 tgaatttcttatataaacccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 42072448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 22324690 - 22324616
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  22324690 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 22324616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 35806888 - 35806814
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  35806888 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 35806814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 21488170 - 21488086
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||| ||| ||| |||||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  21488170 taaattcctttgaatttcttatagaaaccccgataaattggacaatttctttagatttttttatta-ttgcttgcaatttcttatg 21488086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 33934393 - 33934477
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||| |||||||||||||  ||||| |||| ||||||| ||||||||||||||||||||||||    
T  33934393 taaattcctatgaatttcttatataaacccctataaattgggcaatttttttatatttttt-attatttgcttgcaatttcttatg 33934477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 350
Target Start/End: Complemental strand, 19334890 - 19334802
Alignment:
Q  262 atataaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||| ||||||| ||||||||| | ||||||||| || |||||||||| ||| ||| ||||||||||| ||||||||||||    
T  19334890 atataaattcttatgaattttttatataaacctctataaattagacaatttctttaaattgttttattatttgcttacaatttcttatg 19334802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 24065367 - 24065293
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||  ||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||    
T  24065367 tgaatttcttatataaactcctataaattgggcaatttctttagctttttt-attatttgcttgcaatttcttatg 24065293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 42013966 - 42013892
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||  ||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  42013966 tgaatttcttatataaactcctataaattgggcaatttctttatatttttt-attatttgcttgcaatttcttatg 42013892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 10112151 - 10112066
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| ||| |||||||||||||||  | ||||||||||| |||||||||  |||||||||||||||  |||||||||||||||    
T  10112151 taaattcctcttaatttcttatataaactcttataaattggacaatttcttttaattttttgattatttatttgcaatttcttatg 10112066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 34697431 - 34697498
Alignment:
Q  283 ttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||| ||||||||||   ||||||||||  |||||| ||||||||||||||||||||||||    
T  34697431 ttatataaatctctataaattgagaaatttctttaattttttttattatttgcttgcaatttcttatg 34697498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 325
Target Start/End: Complemental strand, 2271290 - 2271239
Alignment:
Q  274 ctgaatttcttatataaatccctataaattggataatttctttagatttttt 325  Q
    |||||||||||||||||| ||||||| ||| | |||||||||||||||||||    
T  2271290 ctgaatttcttatataaacccctatatattaggtaatttctttagatttttt 2271239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 16523200 - 16523155
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagat 320  Q
    |||||||||||||||||||||||||||||||  || ||||||||||    
T  16523200 tgaatttcttatataaatccctataaattgggcaacttctttagat 16523155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 16819007 - 16819083
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttcttta--gattttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||   | | ||| |||||||||||||||||| ||||    
T  16819007 tgaatttcttatataaacccctataaattgggtaatttctctatctagtattttattatttgcttgcaattttttat 16819083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 23756599 - 23756566
Alignment:
Q  308 aatttctttagattttttgattatttgcttgcaa 341  Q
    |||||||||| |||||||||||||||||||||||    
T  23756599 aatttctttaaattttttgattatttgcttgcaa 23756566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 29555963 - 29556047
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  29555963 taaattcctatgaatttcttatataaacccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 29556047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 19334594 - 19334669
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttaga-ttttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  19334594 tgaatttcttatataaacccctataaattggacaatttctttagattttttttattatttgcttgcaatttcttat 19334669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 32876564 - 32876638
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  32876564 tgaatttcttatataaacccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 32876638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 33057691 - 33057766
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||  |||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||    
T  33057691 tgaatttcttatataatcccctataaattgaacaatttctttagatttttttattatttgcttgcaatttcttatg 33057766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 10576767 - 10576693
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  10576767 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 10576693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 34259612 - 34259538
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  34259612 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 34259538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 34707210 - 34707136
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  34707210 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 34707136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 44164777 - 44164851
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  44164777 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 44164851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 350
Target Start/End: Original strand, 24320474 - 24320547
Alignment:
Q  276 gaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  24320474 gaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 24320547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 10334282 - 10334197
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||||||||||||  | ||||||||||  ||||||||||||| |||| | ||||||||||||||||||||||    
T  10334282 taaattcctctgaatttcttatataaactcttataaattgggcaatttctttagatatttttaatatttgcttgcaatttcttatg 10334197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 29238177 - 29238251
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| ||||| |||||||| |||||||||| ||||||| ||||||||||| ||||||||||||    
T  29238177 tgaatttcttatataaacccctaaaaattggaaaatttctttacatttttt-attatttgcttacaatttcttatg 29238251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 29981147 - 29981221
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||   |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  29981147 tgaatttcttatataaacttctataaattggacaatttctttatatttttt-attatttgcttgcaatttcttatg 29981221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 17303138 - 17303224
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttaga-ttttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||| || | ||||||||  |||||||||||| |||||| ||||||||||||||||||||||||    
T  17303138 taaattcctatgaatttcttatataaacccttgtaaattgggcaatttctttagattttttttattatttgcttgcaatttcttatg 17303224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 9770754 - 9770682
Alignment:
Q  274 ctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttctt 347  Q
    |||||||||||||||||| | |||| ||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  9770754 ctgaatttcttatataaaccactatgaattggacaatttctttaga-cttttgattatttgcttgcaatttctt 9770682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 15017877 - 15017817
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagatttttt 325  Q
    ||||||| |||||||||||||||||||  | ||||||||||| ||||||||||||||||||    
T  15017877 taaattcctctgaatttcttatataaacgcgtataaattggacaatttctttagatttttt 15017817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 41853226 - 41853158
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagatt-ttttgattatttgcttgcaattt 344  Q
    |||||||||| ||||| ||||||| ||||| ||||| |||||||| |||||||||||||||||||||||    
T  41853226 aatttcttatttaaattcctataagttggacaatttttttagatttttttgattatttgcttgcaattt 41853158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 23032186 - 23032233
Alignment:
Q  302 ttggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  23032186 ttggacaatttctttagattttttgattatttgcttgtaattttttat 23032233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 26284433 - 26284483
Alignment:
Q  296 tataaattggataatttctttagattttttgattatttgcttgcaatttctt 347  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  26284433 tataaattggacaatttctttagatttttt-attattttcttgcaatttctt 26284483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 1387322 - 1387396
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  1387322 tgaatttcttagataaacccctataaattgggtaatttctttagatttttt-attatttgcttgcaatttcttatg 1387396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 29846536 - 29846462
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  29846536 tgaatttcttatataaacccctataaattggacaatttctttacatttttt-attatttgcttgcaatttcttatg 29846462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 19181652 - 19181568
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| | ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  19181652 taaattcctatgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 19181568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 40277324 - 40277396
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  40277324 aatttcttatataaatccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 40277396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 14539736 - 14539812
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    |||||||||||||||||||| |||||||||| |  |||||||||||||||||| ||||||| |||||||||||||||    
T  14539736 tctgaatttcttatataaattcctataaattaggcaatttctttagatttttttattattttcttgcaatttcttat 14539812  T

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Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 6318492 - 6318563
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttaga-ttttttgattatttgcttgcaatttc 345  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||||||    
T  6318492 tgaatttcttatataaatccctataaattgggcaatttctttagattttttttattatttgcttgcaatttc 6318563  T

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Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 14942078 - 14942152
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  14942078 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 14942152  T

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Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 42769792 - 42769866
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  42769792 tgaatttcttatataaacccctataaattgggcaatttctttacatttttt-attatttgcttgcaatttcttatg 42769866  T

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Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 40780160 - 40780074
Alignment:
Q  265 taaattcttctgaatttcttatataaat-ccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||||||||||||  ||||||||||| || ||||| |||| ||||||| ||||||||||||||||||||||||    
T  40780160 taaattcctctgaatttcttatataaacaccctataaatttgacaatttttttaaattttttaattatttgcttgcaatttcttatg 40780074  T

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Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 23685406 - 23685479
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||||||||||| |||||||| || ||||| |||| || |||||||||||||||||||||||||||||    
T  23685406 aatttcttatataaatccttataaatttgacaatttatttatatattttgattatttgcttgcaatttcttatg 23685479  T

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Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 350
Target Start/End: Complemental strand, 33009780 - 33009691
Alignment:
Q  262 atataaattcttctgaatttcttatataaatccctataaattggataatttctttagattttt-tgattatttgcttgcaatttcttatg 350  Q
    |||||||| | | ||||||| |||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  33009780 atataaatccctatgaatttgttatataaatccttataaattggacaatttctttagatttttattattatttgcttgcaattttttatg 33009691  T

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Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 350
Target Start/End: Original strand, 14186472 - 14186546
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||||||||||| |||||||||||||  |||||||||| | ||||| ||||||||||||||||||||||||    
T  14186472 tgaatttcttatataaacccctataaattgggcaatttctttacacttttt-attatttgcttgcaatttcttatg 14186546  T

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Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 41674738 - 41674815
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttaga-ttttttgattatttgcttgcaatttcttat 349  Q
    ||||||||| ||||||||| || ||||||||||| |||||||||||| |||||| | |||||||||||||||||||||    
T  41674738 tctgaattttttatataaacccttataaattggacaatttctttagatttttttaactatttgcttgcaatttcttat 41674815  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 277 - 349
Target Start/End: Complemental strand, 43139839 - 43139766
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagatt-ttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||||| ||||||||||||   |||||||||||||| |||| |||||||||||||||||||||||    
T  43139839 aatttcttatataaacccctataaattgagcaatttctttagattttttttattatttgcttgcaatttcttat 43139766  T

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Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 28321727 - 28321811
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    |||||||| |||||| ||||||||||| || ||||||||||  |||||| ||  ||||||||||||||||||| |||||||||||    
T  28321727 taaattctcctgaatatcttatataaacccttataaattgggcaatttcattgaattttttgattatttgcttccaatttcttat 28321811  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 277 - 348
Target Start/End: Original strand, 3597903 - 3597973
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttctta 348  Q
    |||||||| | ||||||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||    
T  3597903 aatttcttgtgtaaatccctataaattggacaatttctttacatttttt-attatttacttgcaatttctta 3597973  T

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Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 3956666 - 3956596
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttc 345  Q
    ||||||| ||||||||| |||| ||||||||| |||||||||| | ||||| |||||||||||||||||||    
T  3956666 tgaatttattatataaacccctgtaaattggacaatttctttaaaattttttattatttgcttgcaatttc 3956596  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 349
Target Start/End: Complemental strand, 25665316 - 25665244
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    |||||||||||||||    |||||||||| |||||||||||  ||||||||||||||||||||||||| ||||    
T  25665316 aatttcttatataaacatttataaattgggtaatttctttaagttttttgattatttgcttgcaattttttat 25665244  T

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Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 32486320 - 32486264
Alignment:
Q  293 ccctataaattggataatttctttagattttttgattatttgcttgcaatttcttat 349  Q
    ||||||||||||| |||||| || ||||||||| |||||||||||||||||||||||    
T  32486320 ccctataaattgggtaattttttaagattttttaattatttgcttgcaatttcttat 32486264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 2888135 - 2888060
Alignment:
Q  275 tgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||| |||||||||  ||||||||||| | ||||| |||||||||||| |||| ||||| ||||  |||||||    
T  2888135 tgaattttttatataaactcctataaattgaacaatttttttagatttttttattaattgctagcaaagtcttatg 2888060  T

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Target: scaffold0079 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 54623 - 54542
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttctt 347  Q
    ||||||| | ||||||| |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  54623 taaattcctatgaattttttatataaatccctataaattggacaatttctttacatttttt-attatttgcttgcaatttctt 54542  T

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Target: scaffold0079; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 54549 - 54508
Alignment:
Q  308 aatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  54549 aatttctttacatttttt-attatttgcttgcaatttcttatg 54508  T

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Target: scaffold0045 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 350
Target Start/End: Original strand, 34484 - 34561
Alignment:
Q  273 tctgaatttcttatataaatccctataaattggataatttctttagattttttgattatttgcttgcaatttcttatg 350  Q
    ||||||||  ||||||||||| |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  34484 tctgaattctttatataaatctctataaattggacagtttctttagattttttgattatttgcttacaatttcttatg 34561  T

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Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 20855 - 20916
Alignment:
Q  265 taaattcttctgaatttcttatataaatccctataaattggataatttctttagattttttg 326  Q
    ||||||| ||||||||||||||||||| | |||||||||||| ||||| |||||||||||||    
T  20855 taaattcctctgaatttcttatataaagctctataaattggacaatttttttagattttttg 20916  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 85592 - 85547
Alignment:
Q  277 aatttcttatataaatccctataaattggataatttctttagattt 322  Q
    ||||| ||||| |||||||||||||||||| |||||||||| ||||    
T  85592 aattttttataaaaatccctataaattggacaatttctttacattt 85547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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