View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14469_low_2 (Length: 528)
Name: NF14469_low_2
Description: NF14469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14469_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 490; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 7 - 511
Target Start/End: Original strand, 31332463 - 31332968
Alignment:
| Q |
7 |
gctgttgcttcagtgccccactttggaaaatgttcatgcatcaggttgtcaggatttgttagtcgaggctatccaaagtcaggtaacaaagtcaggttgt |
106 |
Q |
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| T |
31332463 |
gctgttgcttcagtgccccactttggaaaatgttcatgcatcaggttgtcaggatttgttagtcgaggctatccaaagtcaggtaacaaagtcaggttgt |
31332562 |
T |
|
| Q |
107 |
cctttcatgtttcagtagtgt-ccataattaatgaatcaatgttctctttgagatgtgacctttatagattgcttgtagatatgaagaacaagatcactt |
205 |
Q |
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| T |
31332563 |
cctttcatgtttcagtagtgttccataattaatgaatcaatgttctctttgagatgtgacctttatagattgcttgtagatatgaagaacaagataactt |
31332662 |
T |
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| Q |
206 |
gaactaattttctctgcatgaataatatatttattatgatctagtttgtttgatatttattccaggctttcctggttctaatttaaaatatacttaatga |
305 |
Q |
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| T |
31332663 |
gaactaattttctctgcatgaataatatatttattatgatctagtttgtttgatatttattccaggctttcctggttctaatttaaaatatacttaatga |
31332762 |
T |
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| Q |
306 |
tttgtttgcaggtccgcaatgtttttcctgctatagataaccattcgccttctaaacgtctacctgatggctccaaaagggttcgggttccttatttact |
405 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31332763 |
tttgtttgcaggtccgcaatgtttttcctgctatagataaccattcgccttctaaacgtctacctgatggctccaaaagggttcgggttccttatttact |
31332862 |
T |
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| Q |
406 |
tagtggcgaggtaaagctaaaagaaataatattatgcatgttttaaaaacatattgtgtttatctaggatggaaaactttaaaaataatatttactacgt |
505 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
31332863 |
tagtggcgaggtaaagctaaaagaaataatattatgcatgttttaaaaacatattgtgtttatctaggattgaaaactttaaaaataatatttactacgt |
31332962 |
T |
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| Q |
506 |
agctat |
511 |
Q |
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| T |
31332963 |
agctat |
31332968 |
T |
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