View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1446_low_18 (Length: 347)

Name: NF1446_low_18
Description: NF1446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1446_low_18
NF1446_low_18
[»] chr4 (12 HSPs)
chr4 (1-186)||(569112-569300)
chr4 (235-331)||(18291011-18291107)
chr4 (235-330)||(11497740-11497835)
chr4 (235-325)||(15348970-15349060)
chr4 (235-325)||(10629744-10629834)
chr4 (235-325)||(14686899-14686989)
chr4 (235-318)||(15253337-15253420)
chr4 (235-330)||(45235358-45235453)
chr4 (246-318)||(13821900-13821972)
chr4 (235-330)||(42710905-42711000)
chr4 (235-318)||(22109951-22110034)
chr4 (246-318)||(3353608-3353680)
[»] scaffold0485 (1 HSPs)
scaffold0485 (235-330)||(11044-11139)
[»] chr7 (24 HSPs)
chr7 (235-330)||(4311716-4311811)
chr7 (235-326)||(8783228-8783319)
chr7 (235-330)||(539886-539981)
chr7 (235-330)||(12565995-12566090)
chr7 (235-325)||(13355236-13355326)
chr7 (235-330)||(14222842-14222937)
chr7 (235-325)||(5396126-5396216)
chr7 (246-318)||(20107267-20107339)
chr7 (235-318)||(8716855-8716938)
chr7 (235-318)||(14550087-14550170)
chr7 (235-330)||(16326906-16327001)
chr7 (235-318)||(18286616-18286699)
chr7 (235-325)||(10439465-10439555)
chr7 (246-318)||(18594420-18594492)
chr7 (246-318)||(18617192-18617264)
chr7 (246-318)||(48803010-48803082)
chr7 (235-330)||(9581894-9581988)
chr7 (235-318)||(13656924-13657007)
chr7 (235-318)||(16466755-16466838)
chr7 (235-330)||(23514060-23514155)
chr7 (246-318)||(16531035-16531107)
chr7 (246-318)||(16634555-16634627)
chr7 (246-318)||(16760942-16761014)
chr7 (280-318)||(13672848-13672886)
[»] chr6 (15 HSPs)
chr6 (236-318)||(23518879-23518961)
chr6 (235-325)||(18188700-18188790)
chr6 (235-325)||(18853014-18853104)
chr6 (235-325)||(17818513-17818603)
chr6 (235-309)||(22062640-22062714)
chr6 (246-318)||(11218600-11218672)
chr6 (246-318)||(20017391-20017463)
chr6 (246-318)||(21561601-21561673)
chr6 (246-318)||(22166706-22166778)
chr6 (246-318)||(22768281-22768353)
chr6 (250-318)||(18447198-18447266)
chr6 (246-318)||(20169224-20169296)
chr6 (235-318)||(24856384-24856467)
chr6 (246-314)||(18010841-18010909)
chr6 (246-318)||(25966635-25966707)
[»] chr3 (29 HSPs)
chr3 (235-325)||(20560026-20560116)
chr3 (235-325)||(20562334-20562424)
chr3 (235-325)||(20564642-20564732)
chr3 (235-330)||(3246643-3246738)
chr3 (235-325)||(9362084-9362174)
chr3 (235-325)||(13089934-13090024)
chr3 (235-330)||(6813854-6813949)
chr3 (235-318)||(7599347-7599430)
chr3 (235-330)||(12777631-12777726)
chr3 (235-317)||(13137309-13137391)
chr3 (246-318)||(13693870-13693942)
chr3 (235-318)||(15630096-15630179)
chr3 (246-318)||(10161339-10161411)
chr3 (246-318)||(12161215-12161287)
chr3 (235-325)||(13096707-13096794)
chr3 (246-318)||(15644070-15644142)
chr3 (235-318)||(13689658-13689741)
chr3 (267-318)||(16654708-16654759)
chr3 (246-317)||(20157604-20157675)
chr3 (246-318)||(15945606-15945678)
chr3 (267-318)||(10603705-10603756)
chr3 (280-318)||(3278461-3278499)
chr3 (281-318)||(10146002-10146039)
chr3 (281-318)||(12188261-12188298)
chr3 (281-318)||(12194675-12194712)
chr3 (281-318)||(13188603-13188640)
chr3 (285-318)||(14446755-14446788)
chr3 (246-318)||(3340370-3340442)
chr3 (246-318)||(13505666-13505738)
[»] chr8 (15 HSPs)
chr8 (235-318)||(22034670-22034753)
chr8 (235-325)||(17619738-17619828)
chr8 (235-330)||(20040196-20040291)
chr8 (235-318)||(22098214-22098297)
chr8 (235-318)||(22100765-22100848)
chr8 (235-318)||(21381084-21381167)
chr8 (235-325)||(21854903-21854993)
chr8 (235-318)||(16419740-16419823)
chr8 (235-330)||(20001290-20001385)
chr8 (235-318)||(21955070-21955153)
chr8 (267-318)||(21099985-21100036)
chr8 (246-311)||(22290022-22290087)
chr8 (246-318)||(22832033-22832105)
chr8 (246-312)||(21942605-21942671)
chr8 (246-318)||(21826376-21826448)
[»] chr5 (19 HSPs)
chr5 (235-330)||(24218821-24218916)
chr5 (235-325)||(24939527-24939617)
chr5 (235-330)||(18487190-18487285)
chr5 (235-330)||(22827886-22827981)
chr5 (235-330)||(23601767-23601862)
chr5 (235-318)||(15734525-15734608)
chr5 (235-325)||(21282038-21282127)
chr5 (235-323)||(20445975-20446063)
chr5 (235-318)||(23747042-23747125)
chr5 (244-319)||(24954326-24954401)
chr5 (235-318)||(25007923-25008006)
chr5 (246-318)||(25117297-25117369)
chr5 (246-318)||(25176388-25176460)
chr5 (246-318)||(30760793-30760865)
chr5 (235-318)||(22318624-22318707)
chr5 (235-325)||(23711832-23711921)
chr5 (246-318)||(20439315-20439387)
chr5 (235-318)||(20621154-20621237)
chr5 (246-318)||(21387274-21387346)
[»] scaffold0026 (1 HSPs)
scaffold0026 (235-330)||(17349-17444)
[»] scaffold0012 (2 HSPs)
scaffold0012 (235-330)||(8399-8494)
scaffold0012 (235-330)||(12571-12666)
[»] chr1 (8 HSPs)
chr1 (235-330)||(27045859-27045954)
chr1 (235-309)||(21785591-21785665)
chr1 (235-318)||(20236472-20236555)
chr1 (246-318)||(8652015-8652087)
chr1 (246-316)||(8948703-8948773)
chr1 (246-318)||(21799825-21799897)
chr1 (235-318)||(19876814-19876897)
chr1 (246-306)||(20392495-20392555)
[»] scaffold0566 (1 HSPs)
scaffold0566 (236-330)||(1599-1693)
[»] scaffold0035 (1 HSPs)
scaffold0035 (235-325)||(51673-51763)
[»] scaffold0402 (1 HSPs)
scaffold0402 (242-318)||(6877-6953)
[»] scaffold0346 (1 HSPs)
scaffold0346 (235-318)||(4730-4814)
[»] scaffold0220 (1 HSPs)
scaffold0220 (235-330)||(9452-9547)
[»] chr2 (13 HSPs)
chr2 (235-318)||(22045800-22045883)
chr2 (235-318)||(25356503-25356586)
chr2 (235-317)||(12754-12836)
chr2 (246-318)||(25368772-25368844)
chr2 (246-318)||(24796446-24796518)
chr2 (243-315)||(25339250-25339322)
chr2 (246-318)||(116495-116567)
chr2 (246-318)||(16774648-16774720)
chr2 (246-318)||(25372136-25372208)
chr2 (235-318)||(27626585-27626668)
chr2 (246-314)||(24821253-24821321)
chr2 (246-318)||(25145942-25146014)
chr2 (246-318)||(27769952-27770024)
[»] scaffold1620 (1 HSPs)
scaffold1620 (246-318)||(146-218)
[»] scaffold1095 (1 HSPs)
scaffold1095 (246-318)||(2267-2339)
[»] scaffold0116 (1 HSPs)
scaffold0116 (246-318)||(38891-38963)
[»] scaffold0020 (2 HSPs)
scaffold0020 (235-318)||(115637-115720)
scaffold0020 (235-318)||(119941-120024)
[»] scaffold0004 (2 HSPs)
scaffold0004 (247-318)||(253037-253108)
scaffold0004 (246-318)||(19126-19198)
[»] scaffold0974 (1 HSPs)
scaffold0974 (236-318)||(115-197)
[»] scaffold0206 (1 HSPs)
scaffold0206 (235-293)||(17752-17810)
[»] scaffold1879 (1 HSPs)
scaffold1879 (246-318)||(73-145)
[»] scaffold0375 (1 HSPs)
scaffold0375 (246-318)||(11520-11592)
[»] scaffold0156 (1 HSPs)
scaffold0156 (246-318)||(7645-7717)
[»] scaffold0078 (1 HSPs)
scaffold0078 (246-318)||(29485-29557)
[»] scaffold0032 (1 HSPs)
scaffold0032 (242-318)||(90275-90351)
[»] scaffold0577 (1 HSPs)
scaffold0577 (235-318)||(5606-5689)
[»] scaffold0215 (1 HSPs)
scaffold0215 (267-318)||(8156-8207)
[»] scaffold0031 (1 HSPs)
scaffold0031 (271-325)||(22244-22298)
[»] scaffold0506 (1 HSPs)
scaffold0506 (246-318)||(3207-3279)
[»] scaffold0117 (1 HSPs)
scaffold0117 (246-318)||(32729-32801)
[»] scaffold0051 (1 HSPs)
scaffold0051 (250-318)||(25542-25610)
[»] scaffold0473 (1 HSPs)
scaffold0473 (235-318)||(13029-13112)
[»] scaffold0022 (1 HSPs)
scaffold0022 (267-318)||(24561-24612)
[»] scaffold0216 (1 HSPs)
scaffold0216 (280-318)||(10408-10446)
[»] scaffold1225 (1 HSPs)
scaffold1225 (243-291)||(668-716)
[»] scaffold0404 (1 HSPs)
scaffold0404 (246-306)||(30-90)
[»] scaffold0037 (2 HSPs)
scaffold0037 (242-318)||(44424-44499)
scaffold0037 (242-318)||(51813-51888)
[»] scaffold0018 (1 HSPs)
scaffold0018 (246-314)||(19419-19487)


Alignment Details
Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 569300 - 569112
Alignment:
Q  1 ttccatgaaatatttgattgtgattttgtgagtgccaagtttgccgat---gttaccttctttgttctaaaattagtactgttagtattttcaatttctt 97  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  569300 ttccatggaatatttgattgtgattttgtgagtgccaagtttgccaatattgttaccttctttgttctaaaattagtagtgttagtattttcaatttctt 569201  T
Q  98 agtttttgagtgccaggtttgtatgaatgcagagataatacctaatacattaacatggtttggttaaagtatgaacatgaggatggtca 186  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  569200 agtttttgcgtgccaggtttgtatgaatgcagagataatacctaatacattaacatgatttggttaaagtatgaacatgaggatggtca 569112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 235 - 331
Target Start/End: Complemental strand, 18291107 - 18291011
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgattt 331  Q
    |||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||  |||| ||||||||| |||| |||||||||| |||||    
T  18291107 ctcacaattttattgaagtccataaggtggaccttagaggttaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgattt 18291011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 11497740 - 11497835
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||  |||| ||||||||| |||| |||||||||| ||||    
T  11497740 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgatt 11497835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 15348970 - 15349060
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| || ||||| ||||| ||||||||| |||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  15348970 ctcacaattttattgaagttcataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattattttattcatttatt 15349060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 10629834 - 10629744
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  10629834 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 10629744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 14686899 - 14686989
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||  | || ||||||||| |||| ||||||||||    
T  14686899 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatt 14686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 15253420 - 15253337
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  15253420 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccggagcatttggttattctcttc 15253337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 45235358 - 45235453
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||| ||| |||||||| || || ||| ||||| |||||||||||||||||  | || ||||||||| |||| |||||||||| ||||    
T  45235358 ctcacaattttaatgaagtccataaggtagacctttgaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatttgatt 45235453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 13821972 - 13821900
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  13821972 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 13821900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 42710905 - 42711000
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    ||||||||||||| ||  |||| || ||||| ||||||||| |||||||||||||||||   ||| ||||||||| | || |||||||||| ||||    
T  42710905 ctcacaattttatggaaatccacaaggtggaccttggaggtgaaggtgttgcatcatgtattggaacatttgattgtgttattcatttatttgatt 42711000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 22110034 - 22109951
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  | || ||||  | |||||||||||||||||| |||||||| |||||||||||    
T  22110034 ctcacatttttattgaggtccatagggagggccctgaaggtgtaagtgttgcatcatgttccgaagcatttggttattttcttc 22109951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 3353680 - 3353608
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||| |||  | ||| ||||||||| ||  || |||||||||||||| |||||||| |||||||||||    
T  3353680 attgaggtctatagggaggaccttggaggtgaaaatggtgcatcatgttccgaagcatttggttattttcttc 3353608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 11044 - 11139
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  11044 ctcacaattttattgaggtccataaggtggaccttggaggtgaaggtgttgcagcatgttccagagcatttgattattttctacatttattcgatt 11139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 4311811 - 4311716
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    ||||||||||||||||||| ||| | ||||| ||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  4311811 ctcacaattttattgaggttcattaggtggaccttggaggtgaaggtgttgcatcatgtttcggagcatttgattgttttattcatttattcgatt 4311716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 8783228 - 8783319
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattc 326  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||   |||||||||||||||||||||||||||||    
T  8783228 ctcacaattttattgaggtccataaggtggaccttggaggtgaaggtgtagcatcatgttttagagcatttgattattttcttcatttattc 8783319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 539886 - 539981
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| ||||| ||||||||| ||| |||||||||||||  |||| ||||||||| |||| |||||||||| ||||    
T  539886 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgatt 539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 12566090 - 12565995
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| |||||||||| ||||    
T  12566090 ctcacaattttattgaagtccataaggtagaacttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgatt 12565995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 13355326 - 13355236
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  13355326 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 13355236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 14222842 - 14222937
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||  |||||||| ||||| ||||||||| |||||||||||||||||  |||| ||||||||| |||| |||||| ||| ||||    
T  14222842 ctcacaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcattcatttgatt 14222937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 5396216 - 5396126
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| || ||||| ||||| ||||||||| || ||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  5396216 ctcacaattttattgaagttcataaggtggaccttggaggtgaatgtgttgcatcatgtatcggaacatttgattgttttattcatttatt 5396126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 20107339 - 20107267
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||| | ||| |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  20107339 attgaggtccataaggaggaccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 20107267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 8716938 - 8716855
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  8716938 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 8716855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 14550170 - 14550087
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  14550170 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 14550087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 16326906 - 16327001
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||| ||||||||||  |||||||| ||||| ||||||||| |||||||||||||||||  |||| |||| |||| |||| |||||| ||| ||||    
T  16326906 ctcagaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacattggattgttttattcattcatttgatt 16327001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 18286699 - 18286616
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||  |||||||| |||||||||||    
T  18286699 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccaaagcatttggttattttcttc 18286616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 10439465 - 10439555
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| ||||| || || || ||||||||| |||||||||||||||||  | || ||||||||| |||| | ||||||||    
T  10439465 ctcacaattttattgaagtccaaaaggtagaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttatgcatttatt 10439555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 18594420 - 18594492
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  18594420 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 18594492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 18617264 - 18617192
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  18617264 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 18617192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 48803010 - 48803082
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||||||||  | |||||||||||||||||| |||||||||||||| |||||    
T  48803010 attgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttgattattctcttc 48803082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 9581988 - 9581894
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    ||||||||||||| ||  |||| || ||||| ||||||||| |||||||||||||||| | |||| ||||||||| | || |||||||||| ||||    
T  9581988 ctcacaattttatggaaatccacaaggtggaccttggaggtgaaggtgttgcatcatgat-cggaacatttgattgtgttattcatttatttgatt 9581894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 13657007 - 13656924
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||  | ||||| |||||||||||| |||||||| ||||| |||||    
T  13657007 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttccatcatgttccgaagcatttggttattctcttc 13656924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 16466755 - 16466838
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  | |||||||| | |||||||||||||| ||| |||||||| |||||||||||    
T  16466755 ctcacatttttattgaggtccatagggagggccatggaggttgaagtgttgcatcatgtgccgaagcatttggttattttcttc 16466838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 23514155 - 23514060
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| ||| | || ||||| ||| ||||| |||||||||||||||||  |||| |||| |||| | || |||||||||| ||||    
T  23514155 ctcacaattttattgaagtctagaaggtggaccttagaggtgaaggtgttgcatcatgtatcggaacattggattgtgttattcatttatttgatt 23514060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 16531107 - 16531035
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||| | |||||||| |||||||||||    
T  16531107 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttcggaagcatttggttattttcttc 16531035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 16634555 - 16634627
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||| | |||||||| |||||||||||    
T  16634555 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttcggaagcatttggttattttcttc 16634627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 16760942 - 16761014
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| || ||||| |||||||||||    
T  16760942 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttccgaagtatttggttattttcttc 16761014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 13672886 - 13672848
Alignment:
Q  280 gtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  13672886 gtgttgcatcatgttccgaagcatttggttattttcttc 13672848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 23518879 - 23518961
Alignment:
Q  236 tcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||||||||| ||||| |||| |||| ||| |||||||||||||||||||| |||| ||||||||||||    
T  23518879 tcacaattttattgaggtccataaggtggaccttgtaggtgaagttgttgcatcatgttccggagaattttattattttcttc 23518961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 18188700 - 18188790
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  18188700 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 18188790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 18853104 - 18853014
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||  | || ||||||||| |||| ||||||||||    
T  18853104 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatt 18853014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 17818603 - 17818513
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  | || ||||||||| |||| ||||||||||    
T  17818603 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcagaacatttgatttttttattcatttatt 17818513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 22062640 - 22062714
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgatt 309  Q
    |||||||||||||||| |||| ||| ||||| ||||||||| ||| |||||||||||||  |||| |||||||||    
T  22062640 ctcacaattttattgaagtccttaaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgatt 22062714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 11218672 - 11218600
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  11218672 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 11218600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 20017391 - 20017463
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  20017391 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 20017463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 21561601 - 21561673
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  21561601 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 21561673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 22166706 - 22166778
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  22166706 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 22166778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 22768281 - 22768353
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  22768281 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 22768353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 18447266 - 18447198
Alignment:
Q  250 aggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||| | ||| |||||||||  | |||||||||||||||||| |||||||| ||||| |||||    
T  18447266 aggtccataaaggggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctcttc 18447198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 20169296 - 20169224
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||| ||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  20169296 attggggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 20169224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 24856384 - 24856467
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  | || ||||  | |||||||||||||||||| |||||||| |||||||||||    
T  24856384 ctcacatttttattgaggtccatagggagggccctgaaggtgtaagtgttgcatcatgttccgaagcatttggttattttcttc 24856467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 18010909 - 18010841
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattatttt 314  Q
    |||||||||||||  | ||| |||||||||  | ||| |||||||||||||| |||||||| |||||||    
T  18010909 attgaggtccatagggaggaccttggaggtggaagtggtgcatcatgttccgaagcatttggttatttt 18010841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 25966707 - 25966635
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||| | ||| ||||||||| ||  || | |||||||||| | |||||||| |||||||||||    
T  25966707 attgaggtccataaggaggaccttggaggtgaatttgctccatcatgttctgaagcatttggttattttcttc 25966635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 20560116 - 20560026
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  20560116 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 20560026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 20562424 - 20562334
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  20562424 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 20562334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 20564732 - 20564642
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  20564732 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 20564642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 3246643 - 3246738
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||| ||| |||| ||||| ||||| ||||| ||||||||| |||||||||||||||||| | |||||||||||| |||| |||||||||||||||    
T  3246643 ctcaaaatgttatggaggttcataaggtggaccttggaggtgaaggtgttgcatcatgtttcagagcatttgattgttttattcatttattcgatt 3246738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 9362084 - 9362174
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  9362084 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 9362174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 13089934 - 13090024
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  13089934 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 13090024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 6813949 - 6813854
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||| ||| ||||| ||||||||| ||| |||||||||||||  | || ||||||||| |||| |||||||||| ||||    
T  6813949 ctcacaattttattgaagtccttaaagtggaccttggaggtgaagatgttgcatcatgtatcagaacatttgattgttttattcatttatttgatt 6813854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 7599430 - 7599347
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  7599430 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 7599347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 12777631 - 12777726
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| ||||| ||||||||| ||||||||| |||||||  |||| ||||||||| | || | |||||||| ||||    
T  12777631 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgtatcatgtatcggaacatttgattgtcttatgcatttatttgatt 12777726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 13137309 - 13137391
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttctt 317  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| ||||||||||    
T  13137309 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttctt 13137391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 13693942 - 13693870
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||||||||| ||||||| |||||||||||| |||||||||||||| |||||    
T  13693942 attgaggtccatagggaggaccttggaggttgaggtgtttcatcatgttccgaagcatttgattattctcttc 13693870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 15630096 - 15630179
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| || ||||||||    
T  15630096 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggtttttttcttc 15630179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 10161339 - 10161411
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  10161339 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 10161411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 12161215 - 12161287
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  12161215 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 12161287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 13096794 - 13096707
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || |||||||||   |||||| ||||||||  |||| ||||||||| |||| ||||||||||    
T  13096794 ctcacaattttattgaagtccataaggtagaccttggaggt---ggtgttccatcatgtatcggaacatttgattgttttattcatttatt 13096707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 15644142 - 15644070
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  15644142 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 15644070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 13689741 - 13689658
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||  | ||||| |||||||||||| |||||||| ||||| |||||    
T  13689741 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttccatcatgttccgaagcatttggttattctcttc 13689658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 16654759 - 16654708
Alignment:
Q  267 cttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  16654759 cttggaggtgaagatggtgcatcatgttccgaagcatttgattattttcttc 16654708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 20157604 - 20157675
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttctt 317  Q
    |||||||||||||  | ||| ||||||||| || |||||||||||||||| | |||||||| ||||||||||    
T  20157604 attgaggtccatagggaggaccttggaggtgaaagtgttgcatcatgttctgaagcatttggttattttctt 20157675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 15945678 - 15945606
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| || ||||||||    
T  15945678 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttc 15945606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 10603705 - 10603756
Alignment:
Q  267 cttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||| ||| || |||||||||||||| |||||||| |||||||||||    
T  10603705 cttggaggtgaagatggtgcatcatgttccgaagcatttggttattttcttc 10603756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 3278499 - 3278461
Alignment:
Q  280 gtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  3278499 gtgttgcatcatgttccgaagcatttgattattctcttc 3278461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Complemental strand, 10146039 - 10146002
Alignment:
Q  281 tgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  10146039 tgttgcatcatgttccgaagcatttggttattttcttc 10146002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 12188261 - 12188298
Alignment:
Q  281 tgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  12188261 tgttgcatcatgttccgaagcatttggttattttcttc 12188298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 12194675 - 12194712
Alignment:
Q  281 tgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  12194675 tgttgcatcatgttccgaagcatttggttattttcttc 12194712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Original strand, 13188603 - 13188640
Alignment:
Q  281 tgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  13188603 tgttgcatcatgttccgaagcatttggttattttcttc 13188640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 318
Target Start/End: Original strand, 14446755 - 14446788
Alignment:
Q  285 gcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||||||| ||||||||||||||||||||    
T  14446755 gcatcatgttccgaagcatttgattattttcttc 14446788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 3340370 - 3340442
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||| ||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| || ||||||||    
T  3340370 attggggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttc 3340442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 13505666 - 13505738
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||| ||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| || ||||||||    
T  13505666 attgtggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttc 13505738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 22034670 - 22034753
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  22034670 ctcacatttttattgaggtccatagggaggaacttggaggttgaagtgttgcatcatgttccgaagcatttgattattttcttc 22034753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 17619828 - 17619738
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  17619828 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 17619738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 20040196 - 20040291
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| ||||| ||||||||| ||| |||||||||||||  || | ||||||||| |||| |||||||||| ||||    
T  20040196 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgtatcgaaacatttgattgttttattcatttatttgatt 20040291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 22098297 - 22098214
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  22098297 ctcacatttttattgaggtccatagggaggaccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 22098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 22100765 - 22100848
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  22100765 ctcacatttttattgaggtccatagggaggaccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 22100848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 21381167 - 21381084
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  21381167 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 21381084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 21854903 - 21854993
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  || | ||||||||| |||| ||| ||||||    
T  21854903 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcgaaacatttgattgttttattcgtttatt 21854993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 16419740 - 16419823
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||  | |||||||||||||||||| |||||||| ||||| |||||    
T  16419740 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctcttc 16419823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 20001385 - 20001290
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||  |||||||| ||||| ||||||||| |||||||||||||||||  |||| |||| |||| |||  |||||| ||| ||||    
T  20001385 ctcacaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacattggattgtttgattcattcatttgatt 20001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 21955153 - 21955070
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||  |||||||| |||||||||||    
T  21955153 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttcctaagcatttggttattttcttc 21955070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 21099985 - 21100036
Alignment:
Q  267 cttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||  |||||||||||||| ||||| ||||||||||||||||||||    
T  21099985 cttggaggtgtaggtgttgcatcatattccgaagcatttgattattttcttc 21100036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 311
Target Start/End: Complemental strand, 22290087 - 22290022
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattat 311  Q
    |||||||||||||| | ||| |||||||||  | |||||||| ||||||||| |||||||||||||    
T  22290087 attgaggtccataagggggaccttggaggtggaagtgttgcaccatgttccgaagcatttgattat 22290022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 22832105 - 22832033
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||| | ||| |||||||||  | ||||||||||||||| || || ||||||||||| |||||    
T  22832105 attgaggtccataaggaggaccttggaggtggaagtgttgcatcatgtttcgaagtatttgattattctcttc 22832033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 21942605 - 21942671
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattatt 312  Q
    |||||||||||||  | ||| |||||||||  | |||||||||||||||||| |||||||| |||||    
T  21942605 attgaggtccatagaggggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttatt 21942671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 21826448 - 21826376
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||| ||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| || ||||||||    
T  21826448 attggggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttc 21826376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 24218916 - 24218821
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||  | || ||||||||| |||| |||||||||| ||||    
T  24218916 ctcacaattttattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatttgatt 24218821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 325
Target Start/End: Complemental strand, 24939617 - 24939527
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  24939617 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatt 24939527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 18487190 - 18487285
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||  |||||||| ||||| ||||||||| |||||||||||||||||  | || ||||||||| |||| |||||||||| ||||    
T  18487190 ctcacaattttattgtagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattgttttattcatttatttgatt 18487285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 22827886 - 22827981
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||| ||| |||||||| || || ||||||||| |||||||||||||||||  | || |||||||||||||| |||||||||| ||||    
T  22827886 ctcacaattttaatgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcagaacatttgattattttattcatttatttgatt 22827981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 23601767 - 23601862
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| ||||| ||||||| | ||| |||||||||||||  |||| ||||||||| |||| |||||||||| ||||    
T  23601767 ctcacaattttattgaagtccataaggtggaccttggagatgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgatt 23601862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 15734608 - 15734525
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  15734608 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 15734525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 21282038 - 21282127
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    |||||||||||||||| ||||||||  | || ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||||||||    
T  21282038 ctcacaattttattgaagtccataagatagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgatt-ttttattcatttatt 21282127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 323
Target Start/End: Original strand, 20445975 - 20446063
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcattta 323  Q
    ||||||| |||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| |||||||||  ||| ||||||||    
T  20445975 ctcacaagtttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgctttattcattta 20446063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 23747125 - 23747042
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| | |||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  23747125 ctcacattgttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 23747042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 24954326 - 24954401
Alignment:
Q  244 ttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttca 319  Q
    |||||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| ||||||||||||    
T  24954326 ttattgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttca 24954401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 25007923 - 25008006
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| | |||||| |||||||||||    
T  25007923 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaaacatttggttattttcttc 25008006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 25117297 - 25117369
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  25117297 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 25117369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 25176388 - 25176460
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  25176388 attgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 25176460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 30760793 - 30760865
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  30760793 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 30760865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 22318624 - 22318707
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||  | |||||||||||||| ||| |||||||| ||||| |||||    
T  22318624 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgtgccgaagcatttggttattctcttc 22318707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 23711832 - 23711921
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    ||||||||||||| ||  |||| || ||||| ||||||||| |||||||||||||||| | |||| ||||||||| | || ||||||||||    
T  23711832 ctcacaattttatggaaatccacaaggtggaccttggaggtgaaggtgttgcatcatgat-cggaacatttgattgtgttattcatttatt 23711921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 20439315 - 20439387
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||| ||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  20439315 attgaggtccatatggaggaccttcgaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 20439387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 20621237 - 20621154
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  | || ||||  | |||||||||||||||||| |||||||| |||||||||||    
T  20621237 ctcacatttttattgaggtccatagggagggccctgaaggtgtaagtgttgcatcatgttccgaagcatttggttattttcttc 20621154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 21387346 - 21387274
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||| | ||| |||||||||  | ||| | |||||||||||  |||||||||||||| |||||    
T  21387346 attgaggtccataaggaggaccttggaggtggaagtgctccatcatgttccaaagcatttgattattctcttc 21387274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 17444 - 17349
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||  |||| ||||||||| || | |||||||||| ||||    
T  17444 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttgtattcatttatttgatt 17349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 8399 - 8494
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||   ||| ||||||||| |||| |||||||||| ||||    
T  8399 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtattggaacatttgattgttttattcatttatttgatt 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 12571 - 12666
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||||||| || || ||||||||| |||||||||||||||||   ||| ||||||||| |||| |||||||||| ||||    
T  12571 ctcacaattttattgaagtccataaggtagaccttggaggtgaaggtgttgcatcatgtattggaacatttgattgttttattcatttatttgatt 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 27045954 - 27045859
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| |||| ||| ||||| ||||||||| ||| |||||||||||||  |||| ||||||||| |||| |||||||||| ||||    
T  27045954 ctcacaattttattgaagtccttaaggtggaccttggaggtgaagatgttgcatcatgtatcggaacatttgattgttttattcatttatttgatt 27045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 21785591 - 21785665
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgatt 309  Q
    |||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||  |||| |||||||||    
T  21785591 ctcacaattttattgtagtccataaggtggatcttggaggtgaaggtgttgcatcatgtatcggaacatttgatt 21785665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 20236555 - 20236472
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  20236555 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 20236472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 8652087 - 8652015
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||| | | | |||||||||| || ||||||||||||||||| |||||||||||||| |||||    
T  8652087 attgaggtccataaggagaaccttggaggttgagatgttgcatcatgttccgaagcatttgattattctcttc 8652015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 8948703 - 8948773
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttct 316  Q
    |||||||||||||| | |||||||||||||  | |||||||||||||||  | ||||||||||||||||||    
T  8948703 attgaggtccataaggaggatcttggaggtggaagtgttgcatcatgttatgaagcatttgattattttct 8948773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 21799825 - 21799897
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  21799825 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 21799897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 19876814 - 19876897
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||| | ||| |||||||||  | ||| | ||||||||| || ||||||||||| ||||||||    
T  19876814 ctcacatttttattgaggtccataaggaggaccttggaggtggaagtgctccatcatgtttcgaagcatttgattgttttcttc 19876897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 20392555 - 20392495
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttg 306  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| ||||||||    
T  20392555 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttg 20392495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 1693 - 1599
Alignment:
Q  236 tcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    ||||||||||||||  |||||||| |||||  |||||||| |||||||||||||||||  |||| ||||||||| |||| |||||||||| ||||    
T  1693 tcacaattttattgtagtccataaggtggactttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatttatttgatt 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 325
Target Start/End: Original strand, 51673 - 51763
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    ||||||||| |||||| |||||||| ||||| ||||||||| |||||||||||||||||  |||| ||||||||| |||| ||||| ||||    
T  51673 ctcacaattgtattgaagtccataaggtggaccttggaggtgaaggtgttgcatcatgtatcggaacatttgattgttttattcatgtatt 51763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 6953 - 6877
Alignment:
Q  242 ttttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||  ||||| |||||||||| || |||||||||||||| || |||||||||||||| |||||    
T  6953 ttttattgaggtccatagggtggaccttggaggttgagatgttgcatcatgtttcgaagcatttgattattctcttc 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 4730 - 4814
Alignment:
Q  235 ctcacaatttt-attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||||| |||||||||||||  | ||| |||||||||| |||||||||||||||| ||| |||||||||||||| |||||    
T  4730 ctcacaattttcattgaggtccatagggaggaccttggaggtttaggtgttgcatcatgtgccgaagcatttgattattctcttc 4814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 9452 - 9547
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttattcgatt 330  Q
    |||||||||||||||| ||||||||  |||| ||||||||| ||  |||||||||||||  |||| ||||||||| |||| |||||||||| ||||    
T  9452 ctcacaattttattgaagtccataagttggaccttggaggtgaatatgttgcatcatgtatcggaacatttgattgttttattcatttatttgatt 9547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 22045800 - 22045883
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  22045800 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 22045883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 25356586 - 25356503
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| |||||||||||    
T  25356586 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttcttc 25356503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 12754 - 12836
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttctt 317  Q
    |||||| |||||||||||||||||  | ||  |||||||||| | |||||||||||||||||| |||||||| ||||||||||    
T  12754 ctcacatttttattgaggtccatagggagggccttggaggttgaagtgttgcatcatgttccgaagcatttggttattttctt 12836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 25368772 - 25368844
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||| | ||| |||||||||| || ||||||||||||||| | |||||||||||||| |||||    
T  25368772 attgaggtccataaggaggaccttggaggttgagatgttgcatcatgttctgaagcatttgattattctcttc 25368844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 24796446 - 24796518
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  24796446 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 24796518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 25339250 - 25339322
Alignment:
Q  243 tttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttc 315  Q
    ||||||||||||||||| | ||| |||| || | |||||||||||||||||||| ||||||||| || |||||    
T  25339250 tttattgaggtccataagggggaccttgcagatgaaggtgttgcatcatgttccagagcatttggttgttttc 25339322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 116567 - 116495
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| | |||||| |||||||||||    
T  116567 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaaacatttggttattttcttc 116495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 16774720 - 16774648
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| | |||||| |||||||||||    
T  16774720 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaatcatttggttattttcttc 16774648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 25372136 - 25372208
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||| |  || |||||||||  | ||||||||||||| |||| |||||||||||||| |||||    
T  25372136 attgaggtccataaggatgaccttggaggtggaagtgttgcatcatgctccgaagcatttgattattctcttc 25372208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 27626668 - 27626585
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||  | || ||||  | |||||||||||||||||| |||||||| |||||||||||    
T  27626668 ctcacatttttattgaggtccatagggagggccctgaaggtgtaagtgttgcatcatgttccgaagcatttggttattttcttc 27626585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 24821253 - 24821321
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattatttt 314  Q
    |||||||||||||  | ||| ||||||||| ||  || |||||||||||||| |||||||| |||||||    
T  24821253 attgaggtccatagggaggaccttggaggtgaaaatggtgcatcatgttccgaagcatttggttatttt 24821321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 25145942 - 25146014
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||| |||  | ||| |||||||||  | ||| |||||||||||||| |||||||| |||||||||||    
T  25145942 attgaggtcgatagggaggaccttggaggtggaagtggtgcatcatgttccgaagcatttggttattttcttc 25146014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 27769952 - 27770024
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||| ||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| || ||||||||    
T  27769952 attggggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttgttttcttc 27770024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1620 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 146 - 218
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||| ||  | ||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  146 attgaggtccgtagggaggaccttggaggttgaggtgttgcatcatgttccgaagcatttgattattctcttc 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 2339 - 2267
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||||||||| |||||||||||||||||||| | |||||||||||| |||||    
T  2339 attgaggtccatagcgaggaccttggaggttgaggtgttgcatcatgttccgaatcatttgattattctcttc 2267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 38891 - 38963
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||||||||| || ||||||||||||||||| |||||||||||||| |||||    
T  38891 attgaggtccatagggaggaccttggaggttgagatgttgcatcatgttccgaagcatttgattattctcttc 38963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 115720 - 115637
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||  | |||||||||||||||||| |||||||| ||||| |||||    
T  115720 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctcttc 115637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 120024 - 119941
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||||||||||||||  | ||| |||||||||  | |||||||||||||||||| |||||||| ||||| |||||    
T  120024 ctcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttccgaagcatttggttattctcttc 119941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 253037 - 253108
Alignment:
Q  247 ttgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||| || ||| | |||||||| |||||||||||||||||||| | |||||||||||| |||||    
T  253037 ttgaggtccatagtgaggaccgtggaggttgaggtgttgcatcatgttccgaaacatttgattattctcttc 253108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 19126 - 19198
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| ||  || |||||||||||||| |||||||| |||||||||||    
T  19126 attgaggtccatagggaggaccttggaggtgaaaatggtgcatcatgttccgaagcatttggttattttcttc 19198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 197 - 115
Alignment:
Q  236 tcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||| |||||||||||||||||  | ||| |||||||||  | |||||||||||||||| | |||||||| |||||||||||    
T  197 tcacatttttattgaggtccatagggaggaccttggaggtggaagtgttgcatcatgttctgaagcatttggttattttcttc 115  T

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Target: scaffold0206 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 17752 - 17810
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgt 293  Q
    |||||||||||||||| |||||||| ||||| ||||||||| ||| |||||||||||||    
T  17752 ctcacaattttattgaagtccataaggtggaccttggaggtgaagatgttgcatcatgt 17810  T

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Target: scaffold1879 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1879
Description:

Target: scaffold1879; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 73 - 145
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  ||||| |||||||||  | ||| |||||||||||||| |||||||| |||||||||||    
T  73 attgaggtccatagggtggaccttggaggtggaagtggtgcatcatgttccgaagcatttggttattttcttc 145  T

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Target: scaffold0375 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 11592 - 11520
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||||||||| || |||| |||||||||||| |||||| |||||||||||||    
T  11592 attgaggtccatagggaggaccttggaggttgagatgttacatcatgttccgaagcattcgattattttcttc 11520  T

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Target: scaffold0156 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 7645 - 7717
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||||| ||| |||||||||||||||||| | |||||||||||||| |||||    
T  7645 attgaggtccatagggaggaccttggaagttgaggtgttgcatcatgttctgaagcatttgattattctcttc 7717  T

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Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 29557 - 29485
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  29557 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 29485  T

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Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 90351 - 90275
Alignment:
Q  242 ttttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||  | ||| ||||||||| || ||| ||||||||||| || |||||||| |||||||||||    
T  90351 ttttattgaggtccatagggaggaccttggaggtgaaagtggtgcatcatgtttcgaagcatttggttattttcttc 90275  T

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Target: scaffold0577 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 5689 - 5606
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| |||||| ||||||||||  | ||| ||||| |||| | |||||||||||||||||| |||||||  |||||||||||    
T  5689 ctcacatttttatggaggtccatagggaggaccttggcggttgaagtgttgcatcatgttccgaagcattttgttattttcttc 5606  T

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Target: scaffold0215 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 8156 - 8207
Alignment:
Q  267 cttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||  |||||||||||||| ||||| ||||||||||||||||||||    
T  8156 cttggaggtgtaggtgttgcatcatattccgaagcatttgattattttcttc 8207  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 325
Target Start/End: Complemental strand, 22298 - 22244
Alignment:
Q  271 gaggttaaggtgttgcatcatgttccggagcatttgattattttcttcatttatt 325  Q
    ||||| |||||||||||||||||| ||||| |||||||| |||| ||||||||||    
T  22298 gaggtgaaggtgttgcatcatgtttcggagaatttgattgttttattcatttatt 22244  T

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Target: scaffold0506 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 3207 - 3279
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||| |||| || ||| |||||||||||||| |||||||| |||||||||||    
T  3207 attgaggtccatagggaggaccttgaaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 3279  T

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Target: scaffold0117 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 32729 - 32801
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||  | ||| |||||||||| || ||||||||||||||||| || |||| |||||| |||||    
T  32729 attgaggtccatagggaggaccttggaggttgagatgttgcatcatgttccgaagaatttaattattctcttc 32801  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 25542 - 25610
Alignment:
Q  250 aggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||  | ||| ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  25542 aggtccatagggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 25610  T

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Target: scaffold0473 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 318
Target Start/End: Complemental strand, 13112 - 13029
Alignment:
Q  235 ctcacaattttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||| ||||||||||||||||   | ||| |||||||||  | ||||||||||||| |||| |||||||| ||||| |||||    
T  13112 ctcacatttttattgaggtccatcgggaggaccttggaggtggaagtgttgcatcatggtccgaagcatttggttattctcttc 13029  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 24612 - 24561
Alignment:
Q  267 cttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    ||||||||| || ||| |||||||||||||| |||||||| |||||||||||    
T  24612 cttggaggtgaaagtggtgcatcatgttccgaagcatttggttattttcttc 24561  T

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Target: scaffold0216 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 10446 - 10408
Alignment:
Q  280 gtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  10446 gtgttgcatcatgttccgaagcatttggttattttcttc 10408  T

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Target: scaffold1225 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 716 - 668
Alignment:
Q  243 tttattgaggtccataatgtggatcttggaggttaaggtgttgcatcat 291  Q
    ||||||||||||||||| |  || |||||||||||||||| ||||||||    
T  716 tttattgaggtccataagggtgaccttggaggttaaggtgctgcatcat 668  T

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Target: scaffold0404 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 90 - 30
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttg 306  Q
    |||||||||||||  | ||| ||||||||| || ||| |||||||||||||| ||||||||    
T  90 attgaggtccatatggaggaccttggaggtgaaagtggtgcatcatgttccgaagcatttg 30  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 44499 - 44424
Alignment:
Q  242 ttttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||| | ||| |||||||||  | |||||  ||||||||||| |||||||| ||||| |||||    
T  44499 ttttattgaggtccataagg-ggaccttggaggtggaagtgttatatcatgttccgaagcatttggttattctcttc 44424  T

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Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 51888 - 51813
Alignment:
Q  242 ttttattgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattattttcttc 318  Q
    |||||||||||||||||| | ||| |||||||||  | |||||  ||||||||||| |||||||| ||||| |||||    
T  51888 ttttattgaggtccataagg-ggaccttggaggtggaagtgttatatcatgttccgaagcatttggttattctcttc 51813  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 19419 - 19487
Alignment:
Q  246 attgaggtccataatgtggatcttggaggttaaggtgttgcatcatgttccggagcatttgattatttt 314  Q
    |||||||||||||  | ||| ||||||||| ||  || |||||||||||||| |||||||| |||||||    
T  19419 attgaggtccatagggaggaccttggaggtgaaaatggtgcatcatgttccgaagcatttggttatttt 19487  T

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