View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14472_high_3 (Length: 487)

Name: NF14472_high_3
Description: NF14472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14472_high_3
NF14472_high_3
[»] chr3 (10 HSPs)
chr3 (117-473)||(49856451-49856807)
chr3 (208-440)||(49972939-49973171)
chr3 (210-469)||(39559575-39559834)
chr3 (200-446)||(50815348-50815600)
chr3 (200-446)||(50860264-50860516)
chr3 (211-322)||(49867988-49868099)
chr3 (9-60)||(49856863-49856914)
chr3 (360-469)||(49867866-49867977)
chr3 (283-396)||(49971654-49971767)
chr3 (280-351)||(49979323-49979394)
[»] scaffold0543 (1 HSPs)
scaffold0543 (141-469)||(1972-2300)
[»] scaffold0492 (1 HSPs)
scaffold0492 (141-469)||(3518-3846)
[»] chr7 (6 HSPs)
chr7 (140-457)||(19369803-19370120)
chr7 (274-320)||(19929349-19929395)
chr7 (279-314)||(19935631-19935666)
chr7 (279-314)||(19966770-19966805)
chr7 (282-399)||(34355270-34355387)
chr7 (292-352)||(35053691-35053751)
[»] chr4 (1 HSPs)
chr4 (208-320)||(31211695-31211807)
[»] chr5 (2 HSPs)
chr5 (282-315)||(4288028-4288061)
chr5 (270-327)||(23961901-23961958)


Alignment Details
Target: chr3 (Bit Score: 324; Significance: 0; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 117 - 473
Target Start/End: Complemental strand, 49856807 - 49856451
Alignment:
Q  117 aacttctatatatttcnnnnnnnttcaattgtgtatcattgttaggttgatactgtacacaatttcggtgctggagggtggacggacccataaattgtac 216  Q
    ||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49856807 aacttctatatatttcaaaaaaattcaattgtgtatctttgttaggttgatactgtacacaatttcggtgctggagggtggacggacccagaaattgtac 49856708  T
Q  217 cagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgcagaattcaag 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49856707 cagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgcagaattcaag 49856608  T
Q  317 agtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaattatcttcgttcccaatgaattcaacc 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49856607 agtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaattatcttcgttcccaatgaattcaacc 49856508  T
Q  417 acatgtcaacttctatttatttgaatgataatgtatagagcatgcgtgcaataactg 473  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49856507 acatgtccacttctatttatttgaatgataatgtatagagcatgcgtgcaataactg 49856451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 208 - 440
Target Start/End: Complemental strand, 49973171 - 49972939
Alignment:
Q  208 aaattgtaccagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgca 307  Q
    ||||||| ||| |||||||||||||  ||||  |||||||||||||||||| |||| |  |||| | ||| |||||||| |||||||||||||| ||| |    
T  49973171 aaattgttccaaaatgccttttatcctatctatcaacatgctcacttagaaattattggggcatcacttgtgagcttcactttgcaaaatatattatgaa 49973072  T
Q  308 gaattcaagagtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaattatcttcgttcccaatg 407  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| || ||||||| ||||||| ||||||||  |  ||||||||||| || || || |    
T  49973071 gaattcaagagtacttagcgccatgaaaattcagagtgccaaattcctagatacaactacaaagctccaaatgaaaaaggaattatctttgtgcctaaag 49972972  T
Q  408 aattcaaccacatgtcaacttctatttatttga 440  Q
    ||||||||||||||| ||||| |||||||||||    
T  49972971 aattcaaccacatgtaaacttttatttatttga 49972939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 210 - 469
Target Start/End: Original strand, 39559575 - 39559834
Alignment:
Q  210 attgtaccagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgcaga 309  Q
    ||||| ||||||||||| ||||||||||| | ||||||||| |||| || |||||||||||| || || ||| |||||||||| |||||||| |||||||    
T  39559575 attgttccagaatgcctcttatctcatctcagaacatgctcgcttataaattatagccgcattaactgtgagtttcaatttgctaaatatataatgcaga 39559674  T
Q  310 attcaagagtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaattatcttcgttcccaatgaa 409  Q
    ||||||||||| |||| | ||||| |||||||||||||||||   | ||    |||||||||  ||||||||   |||||||||||| || ||||| |      
T  39559675 attcaagagtattaaggaccatgacaattcagagtgccaaatccttagagtgcaatacaaagcaccaaatgttcatggaattatctttgtgcccaaaggt 39559774  T
Q  410 ttcaaccacatgtcaacttctatttatttgaatgataatgtatagagcatgcgtgcaata 469  Q
    |||| ||||||| |||||| |||| |||||||| | ||||  ||||||||||||||||||    
T  39559775 ttcagccacatgccaacttttattcatttgaatcacaatgggtagagcatgcgtgcaata 39559834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 200 - 446
Target Start/End: Original strand, 50815348 - 50815600
Alignment:
Q  200 ggacccataaattgtaccagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatat 299  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||| ||||| ||| |||||||||| || |||    
T  50815348 ggacccaacaattgttccagaatgccttttatctcatcttacaacatgctcccttcgaaattatagtcgcatcaattgtgagtttcaatttgctaactat 50815447  T
Q  300 atcatgcagaattcaagagtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaatt---atctt 396  Q
    ||||| | |||||||||||||||||||| ||||| ||||||||||||  |||   | || ||||||||||||  ||||||||   |||| ||   |||||    
T  50815448 atcatccggaattcaagagtactaagcaccatgataattcagagtgcagaatccgtagagacaaatacaaagcaccaaatgttcatggagttgtcatctt 50815547  T
Q  397 cgttcccaatgaattca---accacatgtcaacttctatttatttgaatgata 446  Q
     || ||||| || ||||   ||||||||||||||| |||||||||||| ||||    
T  50815548 tgtgcccaaggatttcagccaccacatgtcaacttttatttatttgaacgata 50815600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 200 - 446
Target Start/End: Complemental strand, 50860516 - 50860264
Alignment:
Q  200 ggacccataaattgtaccagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatat 299  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||| ||||| ||| |||||||||| || |||    
T  50860516 ggacccaacaattgttccagaatgccttttatctcatcttacaacatgctcccttcgaaattatagtcgcatcaattgtgagtttcaatttgctaactat 50860417  T
Q  300 atcatgcagaattcaagagtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaatt---atctt 396  Q
    ||||| | |||||||||||||||||||| ||||| ||||||||||||  |||   | || ||||||||||||  ||||||||   |||| ||   |||||    
T  50860416 atcatccggaattcaagagtactaagcaccatgataattcagagtgcagaatccgtagagacaaatacaaagcaccaaatgttcatggagttgtcatctt 50860317  T
Q  397 cgttcccaatgaattca---accacatgtcaacttctatttatttgaatgata 446  Q
     || ||||| || ||||   ||||||||||||||| |||||||||||| ||||    
T  50860316 tgtgcccaaggatttcagccaccacatgtcaacttttatttatttgaacgata 50860264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 49868099 - 49867988
Alignment:
Q  211 ttgtaccagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgcagaa 310  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| ||| ||||||||||||||| ||||||||    
T  49868099 ttgttccagaatgcctttcatctcatcttacaacttgctcacttagaaattacagccgcataaattgtgagtttccatttgcaaaatatataatgcagaa 49868000  T
Q  311 ttcaagagtact 322  Q
    |||| |||||||    
T  49867999 ttcaggagtact 49867988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 49856914 - 49856863
Alignment:
Q  9 gataatactgcttcaaaatttccccctgcttcaaactcttattattgaggag 60  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49856914 gataaaactgcttcaaaatttccccctgcttcaaactcttattattgaggag 49856863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 469
Target Start/End: Complemental strand, 49867977 - 49867866
Alignment:
Q  360 acaaatacaaagatccaaatgtcattggaattatcttcgttcccaatgaattcaaccacatgtcaactt--ctatttatttgaatgataatgtatagagc 457  Q
    ||||||| |||| |||||||||   |||||||||||   | ||||| ||||||| |||||||| |||||  ||||||||||||||||||||| |||||||    
T  49867977 acaaatataaagctccaaatgttcatggaattatctgtatgcccaaggaattcagccacatgtaaacttttctatttatttgaatgataatggatagagc 49867878  T
Q  458 atgcgtgcaata 469  Q
    ||||| ||||||    
T  49867877 atgcgggcaata 49867866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 396
Target Start/End: Complemental strand, 49971767 - 49971654
Alignment:
Q  283 ttcaatttgcaaaatatatcatgcagaattcaagagtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgtc 382  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||  |||| ||||||| |||||||||  || |||||| || ||||   ||||||||     
T  49971767 ttcaatttgcaaaatatataatgcagaattcaagagcattaagcacaatgacaattcagtgtgccaaatacctagatacagatgcaaaacaccaaatgtt 49971668  T
Q  383 attggaattatctt 396  Q
      ||||||||||||    
T  49971667 catggaattatctt 49971654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 49979394 - 49979323
Alignment:
Q  280 agcttcaatttgcaaaatatatcatgcagaattcaagagtactaagcatcatgaaaattcagagtgccaaat 351  Q
    ||||||||||||| || ||||||||||| |||| |||||||||||| | ||||| ||||||| |||||||||    
T  49979394 agcttcaatttgctaactatatcatgcataattgaagagtactaagaaccatgacaattcagggtgccaaat 49979323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 141 - 469
Target Start/End: Complemental strand, 2300 - 1972
Alignment:
Q  141 tcaattgtgtatcattgttaggttgatactgtacacaatttcggtgctggagggtggacggacccataaattgtaccagaatgccttttatctcatctta 240  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||||    ||| |||  ||||||| || |||| |||  ||| ||||||||||||||||    
T  2300 tcaattgtgtataattgtcaggttgatatagtacacaatttcggtgacaaaggatgggaggacccaaaagttgttccaagatgtcttttatctcatctta 2201  T
Q  241 caacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgcagaattcaagagtactaagcatcatgaaaattca 340  Q
    |||||||||||||||||| ||| || ||||||||||| ||||||| |||||||| |||||||||||||||||||||| || || ||| ||||| ||||||    
T  2200 caacatgctcacttagaaattacagtcgcataaattgtgagcttccatttgcaagatatatcatgcagaattcaagaatattacgcaccatgacaattca 2101  T
Q  341 gagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaattatcttcgttcccaatgaattcaaccacatgtcaacttctatttatttga 440  Q
    ||||||| ||||  | ||||||||||||||| |||||||||   ||||||||| || || ||||| |||||||| ||||||||||||| |||||||||||    
T  2100 gagtgccgaattcttagatacaaatacaaagctccaaatgttcatggaattatatttgtgcccaaggaattcaatcacatgtcaacttttatttatttga 2001  T
Q  441 atgataatgtatagagcatgcgtgcaata 469  Q
    ||||||||| ||| |||| | ||||||||    
T  2000 atgataatggatacagcaagagtgcaata 1972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 141 - 469
Target Start/End: Complemental strand, 3846 - 3518
Alignment:
Q  141 tcaattgtgtatcattgttaggttgatactgtacacaatttcggtgctggagggtggacggacccataaattgtaccagaatgccttttatctcatctta 240  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||||    ||| |||  ||||||| || |||| |||  ||| ||||||||||||||||    
T  3846 tcaattgtgtataattgtcaggttgatatagtacacaatttcggtgacaaaggatgggaggacccaaaagttgttccaagatgtcttttatctcatctta 3747  T
Q  241 caacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgcagaattcaagagtactaagcatcatgaaaattca 340  Q
    |||||||||||||||||| ||| || ||||||||||| ||||||| |||||||| |||||||||||||||||||||| || || ||| ||||| ||||||    
T  3746 caacatgctcacttagaaattacagtcgcataaattgtgagcttccatttgcaagatatatcatgcagaattcaagaatattacgcaccatgacaattca 3647  T
Q  341 gagtgccaaatttctggatacaaatacaaagatccaaatgtcattggaattatcttcgttcccaatgaattcaaccacatgtcaacttctatttatttga 440  Q
    ||||||| ||||  | ||||||||||||||| |||||||||   ||||||||| || || ||||| |||||||| ||||||||||||| |||||||||||    
T  3646 gagtgccgaattcttagatacaaatacaaagctccaaatgttcatggaattatatttgtgcccaaggaattcaatcacatgtcaacttttatttatttga 3547  T
Q  441 atgataatgtatagagcatgcgtgcaata 469  Q
    ||||||||| ||| |||| | ||||||||    
T  3546 atgataatggatacagcaagagtgcaata 3518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 140 - 457
Target Start/End: Complemental strand, 19370120 - 19369803
Alignment:
Q  140 ttcaattgtgtatcattgttaggttgatactgtacacaatttcggtgctggagggtggacggacccataaattgtaccagaatgccttttatctcatctt 239  Q
    ||||||||||||||||||| |||||||||| ||| ||||||| |  | |||  | |||| ||| | | | | |||||||| ||||||||||||||||||     
T  19370120 ttcaattgtgtatcattgtcaggttgatacagtaaacaattttgaagatggcagttggaaggaactacatactgtaccagcatgccttttatctcatctc 19370021  T
Q  240 acaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgcagaattcaagagtactaagcatcatgaaaattc 339  Q
    ||||||||||||||||||| |||  ||||| |||| || ||| |||||||||||||||||||| || |||| |||| |||||||| || ||||| |||||    
T  19370020 acaacatgctcacttagaaattactgccgcctaaactgtgagattcaatttgcaaaatatatcttgaagaactcaacagtactaaacaccatgacaattc 19369921  T
Q  340 agagtgccaaatttctggatacaaatacaaagatccaaatg-tcattggaattatcttcgttcccaatgaattcaaccacatgtcaacttctatttattt 438  Q
    ||| |||| |||   | ||||||||||||||  |||||| | |||  ||||||||||   | || || |||||| ||| ||||||||||| |||||||||    
T  19369920 agattgccgaatcagtagatacaaatacaaaactccaaacgatca-aggaattatctctctgccaaaggaattccaccgcatgtcaacttttatttattt 19369822  T
Q  439 gaatgataatgtatagagc 457  Q
    ||||||||||| |||||||    
T  19369821 gaatgataatggatagagc 19369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 19929349 - 19929395
Alignment:
Q  274 attgcgagcttcaatttgcaaaatatatcatgcagaattcaagagta 320  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  19929349 attgtgagcttcaatttgcaaaatatattatgcagaattcaaaagta 19929395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 314
Target Start/End: Original strand, 19935631 - 19935666
Alignment:
Q  279 gagcttcaatttgcaaaatatatcatgcagaattca 314  Q
    ||||||||||||||||||||||| ||||||||||||    
T  19935631 gagcttcaatttgcaaaatatattatgcagaattca 19935666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 314
Target Start/End: Original strand, 19966770 - 19966805
Alignment:
Q  279 gagcttcaatttgcaaaatatatcatgcagaattca 314  Q
    ||||||||||||||||||||||| ||||||||||||    
T  19966770 gagcttcaatttgcaaaatatattatgcagaattca 19966805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 399
Target Start/End: Complemental strand, 34355387 - 34355270
Alignment:
Q  282 cttcaatttgcaaaatatatcatgcagaattcaagagtactaagcatcatgaaaattcagagtgccaaatttctggatacaaatacaaagatccaaatgt 381  Q
    ||||| |||||||||| ||| ||| |||| ||||||||||| ||| ||||||  ||||||||| || |||||   ||||||||  |||||   | |||||    
T  34355387 cttcactttgcaaaatttattatgaagaactcaagagtacttagcgtcatgaccattcagagtcccgaatttactgatacaaacgcaaagcatcgaatgt 34355288  T
Q  382 cattggaattatcttcgt 399  Q
     | |||||||||||||||    
T  34355287 taatggaattatcttcgt 34355270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 35053691 - 35053751
Alignment:
Q  292 caaaatatatcatgcagaattcaagagtactaagcatcatgaaaattcagagtgccaaatt 352  Q
    |||||||||| ||| |||||||||||||||| ||| ||||||  ||||||| | |||||||    
T  35053691 caaaatatattatgaagaattcaagagtacttagcgtcatgaccattcagattcccaaatt 35053751  T

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Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 31211695 - 31211807
Alignment:
Q  208 aaattgtaccagaatgccttttatctcatcttacaacatgctcacttagaagttatagccgcataaattgcgagcttcaatttgcaaaatatatcatgca 307  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||||||||    ||  ||||||| || |||||||| ||||||||||||||||||||    
T  31211695 aaattgtaccagattgtcttttatatcatcttacaacatgctcacttagaagcataagaagcataaactgtgagcttcagtttgcaaaatatatcatgca 31211794  T
Q  308 gaattcaagagta 320  Q
    ||| ||| |||||    
T  31211795 gaactcaggagta 31211807  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 4288061 - 4288028
Alignment:
Q  282 cttcaatttgcaaaatatatcatgcagaattcaa 315  Q
    |||||||||||||||||||| |||||||||||||    
T  4288061 cttcaatttgcaaaatatattatgcagaattcaa 4288028  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 23961901 - 23961958
Alignment:
Q  270 ataaattgcgagcttcaatttgcaaaatatatcatgcagaattcaagagtactaagca 327  Q
    |||||||| |||||| ||||  |||| || || |||||||||||||||||||||||||    
T  23961901 ataaattgtgagctttaattgtcaaagtaaataatgcagaattcaagagtactaagca 23961958  T

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