View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14473_high_46 (Length: 303)

Name: NF14473_high_46
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14473_high_46
NF14473_high_46
[»] chr7 (44 HSPs)
chr7 (1-249)||(36726212-36726459)
chr7 (1-108)||(4089539-4089646)
chr7 (1-101)||(36116287-36116387)
chr7 (7-93)||(37673711-37673797)
chr7 (1-99)||(18122081-18122179)
chr7 (1-107)||(48767524-48767630)
chr7 (1-109)||(49100629-49100737)
chr7 (1-107)||(10685044-10685151)
chr7 (1-107)||(1324668-1324774)
chr7 (1-71)||(20123446-20123516)
chr7 (1-90)||(40211316-40211405)
chr7 (1-73)||(40740944-40741016)
chr7 (1-76)||(25750359-25750434)
chr7 (1-48)||(48193634-48193681)
chr7 (1-71)||(6376172-6376242)
chr7 (7-100)||(35128353-35128444)
chr7 (1-58)||(29636079-29636136)
chr7 (4-71)||(19236109-19236176)
chr7 (1-71)||(2276616-2276686)
chr7 (2-48)||(5334435-5334481)
chr7 (1-71)||(21388238-21388308)
chr7 (1-71)||(21801095-21801165)
chr7 (1-71)||(37048031-37048101)
chr7 (1-71)||(37491658-37491728)
chr7 (1-93)||(48610175-48610267)
chr7 (1-48)||(21392932-21392979)
chr7 (1-76)||(21809686-21809761)
chr7 (1-76)||(27213478-27213553)
chr7 (1-107)||(29723421-29723527)
chr7 (1-60)||(29992982-29993041)
chr7 (106-180)||(23037305-23037378)
chr7 (1-71)||(31373737-31373807)
chr7 (8-50)||(43465189-43465231)
chr7 (1-71)||(46783880-46783950)
chr7 (11-71)||(10595146-10595206)
chr7 (1-73)||(40263705-40263777)
chr7 (1-48)||(26632865-26632912)
chr7 (1-60)||(33181302-33181361)
chr7 (9-48)||(41672614-41672653)
chr7 (68-103)||(47458245-47458280)
chr7 (1-71)||(28663752-28663821)
chr7 (1-71)||(42993227-42993297)
chr7 (1-49)||(21752546-21752594)
chr7 (1-101)||(35960344-35960444)
[»] chr8 (51 HSPs)
chr8 (1-114)||(24512207-24512320)
chr8 (1-92)||(25198264-25198355)
chr8 (6-108)||(37956081-37956182)
chr8 (1-107)||(40337231-40337337)
chr8 (1-98)||(7772481-7772578)
chr8 (1-98)||(25184999-25185096)
chr8 (1-112)||(38773388-38773500)
chr8 (1-107)||(38770227-38770333)
chr8 (1-102)||(57228-57329)
chr8 (1-109)||(37141684-37141792)
chr8 (1-72)||(26878768-26878839)
chr8 (1-71)||(14522644-14522714)
chr8 (1-71)||(14577692-14577762)
chr8 (8-77)||(4273955-4274024)
chr8 (7-92)||(39543709-39543794)
chr8 (7-111)||(16002769-16002873)
chr8 (1-107)||(38203032-38203138)
chr8 (7-76)||(25888586-25888655)
chr8 (1-70)||(41086971-41087040)
chr8 (7-107)||(38761404-38761504)
chr8 (1-71)||(5191589-5191658)
chr8 (9-71)||(16644084-16644146)
chr8 (1-71)||(24962405-24962475)
chr8 (1-43)||(31252695-31252737)
chr8 (1-71)||(31746445-31746515)
chr8 (1-71)||(43980623-43980693)
chr8 (1-49)||(30262578-30262626)
chr8 (3-71)||(45203755-45203822)
chr8 (4-98)||(1769490-1769584)
chr8 (1-43)||(2562770-2562812)
chr8 (1-43)||(3113573-3113615)
chr8 (1-71)||(22590371-22590441)
chr8 (1-47)||(36437521-36437567)
chr8 (1-71)||(40790785-40790854)
chr8 (1-34)||(40517773-40517806)
chr8 (7-71)||(7172215-7172279)
chr8 (1-49)||(12762860-12762908)
chr8 (1-41)||(14906627-14906667)
chr8 (1-72)||(24276597-24276666)
chr8 (140-184)||(32957750-32957794)
chr8 (1-44)||(1177196-1177239)
chr8 (1-60)||(3006821-3006880)
chr8 (4-71)||(14846964-14847031)
chr8 (1-48)||(34882689-34882736)
chr8 (1-40)||(36309636-36309675)
chr8 (1-72)||(37600928-37600999)
chr8 (6-41)||(45283827-45283862)
chr8 (1-42)||(31673621-31673662)
chr8 (1-108)||(10396270-10396375)
chr8 (2-41)||(17933730-17933770)
chr8 (1-77)||(45185307-45185383)
[»] chr6 (25 HSPs)
chr6 (1-107)||(5895691-5895797)
chr6 (6-107)||(4250703-4250804)
chr6 (1-76)||(15981785-15981860)
chr6 (1-77)||(11302845-11302921)
chr6 (1-96)||(34513258-34513353)
chr6 (1-71)||(3729385-3729455)
chr6 (1-71)||(22410883-22410953)
chr6 (1-71)||(31945952-31946022)
chr6 (1-107)||(5084577-5084687)
chr6 (1-109)||(9461252-9461359)
chr6 (1-89)||(16327101-16327189)
chr6 (1-60)||(1763820-1763879)
chr6 (1-49)||(16350539-16350587)
chr6 (1-48)||(10669314-10669361)
chr6 (1-48)||(12514625-12514672)
chr6 (11-102)||(16186538-16186629)
chr6 (1-71)||(19838927-19838997)
chr6 (1-71)||(30466008-30466078)
chr6 (4-48)||(28238357-28238401)
chr6 (1-65)||(30248566-30248629)
chr6 (1-73)||(31536006-31536078)
chr6 (6-70)||(3887987-3888051)
chr6 (1-73)||(11081890-11081962)
chr6 (1-60)||(20522979-20523038)
chr6 (1-49)||(1514268-1514316)
[»] chr4 (49 HSPs)
chr4 (1-107)||(16070391-16070497)
chr4 (1-101)||(5448628-5448728)
chr4 (1-108)||(46729265-46729371)
chr4 (1-93)||(25477199-25477291)
chr4 (1-108)||(48472534-48472642)
chr4 (7-89)||(24072745-24072827)
chr4 (1-103)||(50782742-50782844)
chr4 (1-107)||(39237628-39237738)
chr4 (1-107)||(20262433-20262539)
chr4 (1-93)||(54438484-54438576)
chr4 (1-71)||(30153261-30153331)
chr4 (1-107)||(51787731-51787837)
chr4 (1-107)||(52225979-52226085)
chr4 (1-58)||(13096581-13096638)
chr4 (1-112)||(29584849-29584960)
chr4 (1-71)||(3094178-3094248)
chr4 (1-71)||(14602694-14602764)
chr4 (1-71)||(31486484-31486554)
chr4 (1-71)||(37175061-37175130)
chr4 (1-71)||(38136351-38136421)
chr4 (1-90)||(5536474-5536563)
chr4 (1-58)||(45628113-45628170)
chr4 (1-65)||(34543704-34543768)
chr4 (1-71)||(12624692-12624762)
chr4 (1-71)||(20185695-20185765)
chr4 (1-71)||(22750881-22750951)
chr4 (1-71)||(28116544-28116614)
chr4 (1-51)||(32236847-32236897)
chr4 (1-71)||(41920077-41920147)
chr4 (1-43)||(43800832-43800874)
chr4 (1-71)||(52198767-52198837)
chr4 (1-71)||(56373383-56373453)
chr4 (1-58)||(5932895-5932952)
chr4 (1-58)||(33246536-33246593)
chr4 (1-100)||(52552550-52552649)
chr4 (1-47)||(19654448-19654494)
chr4 (1-71)||(20291336-20291406)
chr4 (7-41)||(31937437-31937471)
chr4 (1-71)||(37625164-37625234)
chr4 (1-58)||(10602245-10602302)
chr4 (6-71)||(20791923-20791988)
chr4 (1-71)||(22651460-22651530)
chr4 (1-71)||(43509079-43509147)
chr4 (10-60)||(54359691-54359741)
chr4 (1-42)||(5168004-5168045)
chr4 (1-65)||(5416908-5416970)
chr4 (1-70)||(10541296-10541365)
chr4 (1-38)||(51918691-51918728)
chr4 (1-48)||(31840117-31840162)
[»] chr2 (54 HSPs)
chr2 (1-107)||(9718211-9718317)
chr2 (1-107)||(17251000-17251106)
chr2 (1-107)||(8065111-8065217)
chr2 (1-107)||(44424555-44424661)
chr2 (1-110)||(41665668-41665776)
chr2 (7-107)||(15851491-15851591)
chr2 (10-102)||(13534380-13534471)
chr2 (1-49)||(14420695-14420743)
chr2 (1-108)||(31644481-31644589)
chr2 (1-93)||(35178832-35178924)
chr2 (1-109)||(3237679-3237789)
chr2 (1-82)||(34329987-34330068)
chr2 (1-78)||(35241747-35241824)
chr2 (1-72)||(37355031-37355102)
chr2 (8-71)||(45214721-45214784)
chr2 (1-71)||(2131753-2131823)
chr2 (1-47)||(27297597-27297643)
chr2 (1-71)||(28264990-28265060)
chr2 (1-58)||(4398563-4398620)
chr2 (1-107)||(28733785-28733889)
chr2 (7-49)||(247678-247720)
chr2 (1-71)||(4033577-4033647)
chr2 (1-71)||(17663620-17663690)
chr2 (1-71)||(27749508-27749578)
chr2 (1-71)||(41865712-41865782)
chr2 (1-71)||(43650030-43650100)
chr2 (1-42)||(7255626-7255667)
chr2 (7-91)||(1246458-1246542)
chr2 (1-45)||(24774887-24774931)
chr2 (20-71)||(2395798-2395849)
chr2 (5-48)||(14527642-14527685)
chr2 (1-60)||(21012860-21012919)
chr2 (1-71)||(3645319-3645389)
chr2 (1-71)||(11459149-11459219)
chr2 (1-71)||(20361979-20362049)
chr2 (1-71)||(44274706-44274776)
chr2 (1-71)||(44421445-44421515)
chr2 (1-46)||(8384011-8384056)
chr2 (1-49)||(375384-375432)
chr2 (1-41)||(38449753-38449793)
chr2 (1-37)||(38982110-38982146)
chr2 (1-59)||(11071676-11071734)
chr2 (6-48)||(20426960-20427002)
chr2 (2-48)||(34042096-34042142)
chr2 (6-48)||(43709938-43709980)
chr2 (67-108)||(23464664-23464705)
chr2 (12-48)||(6275617-6275653)
chr2 (1-41)||(8393234-8393274)
chr2 (1-41)||(15578120-15578160)
chr2 (1-49)||(28190616-28190664)
chr2 (1-45)||(35453772-35453816)
chr2 (1-41)||(36846781-36846821)
chr2 (11-71)||(42250925-42250985)
chr2 (1-41)||(44462620-44462660)
[»] chr5 (42 HSPs)
chr5 (1-109)||(21574918-21575026)
chr5 (1-112)||(25017712-25017823)
chr5 (1-109)||(36177250-36177358)
chr5 (1-108)||(34877625-34877732)
chr5 (1-107)||(5845136-5845242)
chr5 (1-107)||(27798116-27798222)
chr5 (1-108)||(10933965-10934072)
chr5 (1-107)||(4738590-4738696)
chr5 (6-102)||(3631163-3631257)
chr5 (1-92)||(15967150-15967242)
chr5 (1-60)||(15898501-15898560)
chr5 (1-43)||(10523312-10523354)
chr5 (1-71)||(27587834-27587904)
chr5 (3-76)||(7510597-7510670)
chr5 (4-49)||(43060551-43060596)
chr5 (1-89)||(20946065-20946153)
chr5 (3-71)||(29866185-29866253)
chr5 (1-108)||(3247312-3247419)
chr5 (6-49)||(11980734-11980777)
chr5 (1-56)||(12895247-12895302)
chr5 (1-71)||(3559065-3559135)
chr5 (1-71)||(27642498-27642568)
chr5 (1-71)||(32067824-32067894)
chr5 (1-71)||(39690524-39690594)
chr5 (1-95)||(40979250-40979344)
chr5 (1-43)||(129634-129676)
chr5 (1-71)||(30348115-30348185)
chr5 (2-48)||(31642508-31642553)
chr5 (1-71)||(35569043-35569113)
chr5 (2-71)||(43453978-43454047)
chr5 (1-93)||(9946396-9946488)
chr5 (7-71)||(18729584-18729648)
chr5 (7-71)||(21912116-21912180)
chr5 (9-65)||(25690735-25690791)
chr5 (1-45)||(29874200-29874244)
chr5 (1-49)||(36347639-36347687)
chr5 (1-48)||(600784-600831)
chr5 (7-70)||(41521185-41521248)
chr5 (1-71)||(38972165-38972234)
chr5 (1-46)||(4745148-4745193)
chr5 (1-41)||(19281529-19281569)
chr5 (1-49)||(32402095-32402143)
[»] chr3 (54 HSPs)
chr3 (1-93)||(40645647-40645739)
chr3 (1-107)||(30476000-30476106)
chr3 (1-107)||(29645316-29645423)
chr3 (1-114)||(12077784-12077897)
chr3 (1-93)||(41727279-41727371)
chr3 (1-108)||(29676780-29676887)
chr3 (12-87)||(53717578-53717653)
chr3 (1-71)||(46435771-46435841)
chr3 (7-108)||(27638124-27638225)
chr3 (3-72)||(41308819-41308888)
chr3 (1-109)||(50092625-50092733)
chr3 (1-71)||(14645930-14646000)
chr3 (1-71)||(26121327-26121397)
chr3 (1-71)||(26517256-26517326)
chr3 (2-76)||(42891409-42891483)
chr3 (1-93)||(46048494-46048587)
chr3 (3-71)||(25750522-25750590)
chr3 (1-60)||(13084399-13084458)
chr3 (1-71)||(11388116-11388186)
chr3 (5-71)||(20945345-20945411)
chr3 (1-71)||(22659575-22659645)
chr3 (1-71)||(26043014-26043084)
chr3 (1-51)||(29611849-29611899)
chr3 (1-71)||(31531466-31531536)
chr3 (1-92)||(26998869-26998960)
chr3 (1-48)||(33412014-33412061)
chr3 (1-60)||(41825178-41825237)
chr3 (1-76)||(42010858-42010933)
chr3 (1-108)||(43187134-43187241)
chr3 (1-71)||(11344553-11344623)
chr3 (1-47)||(27047219-27047265)
chr3 (1-38)||(28477413-28477450)
chr3 (1-49)||(11393939-11393987)
chr3 (1-65)||(35765687-35765751)
chr3 (1-49)||(39617291-39617339)
chr3 (1-48)||(44083645-44083692)
chr3 (1-48)||(51263100-51263147)
chr3 (22-108)||(5504604-5504690)
chr3 (1-71)||(31819401-31819471)
chr3 (1-47)||(52325544-52325590)
chr3 (1-38)||(41740014-41740051)
chr3 (1-37)||(21932955-21932991)
chr3 (9-65)||(23157096-23157152)
chr3 (7-71)||(33287861-33287925)
chr3 (7-71)||(37729076-37729140)
chr3 (1-33)||(54425997-54426029)
chr3 (1-36)||(35055816-35055851)
chr3 (1-48)||(50363045-50363092)
chr3 (1-43)||(11140728-11140770)
chr3 (106-184)||(31996790-31996867)
chr3 (7-41)||(34055909-34055943)
chr3 (11-76)||(26243462-26243527)
chr3 (1-46)||(48901558-48901603)
chr3 (1-46)||(48903124-48903169)
[»] chr1 (60 HSPs)
chr1 (1-93)||(16582506-16582598)
chr1 (1-107)||(5085127-5085233)
chr1 (1-107)||(33231799-33231905)
chr1 (1-107)||(34696921-34697027)
chr1 (1-102)||(48721906-48722008)
chr1 (1-102)||(32047406-32047507)
chr1 (1-100)||(9675705-9675804)
chr1 (1-100)||(25269343-25269442)
chr1 (1-114)||(3143355-3143468)
chr1 (8-109)||(29302494-29302595)
chr1 (13-88)||(28334265-28334340)
chr1 (1-108)||(29140692-29140799)
chr1 (1-107)||(5322061-5322167)
chr1 (1-71)||(38680470-38680540)
chr1 (1-71)||(44335284-44335354)
chr1 (4-108)||(44652902-44653003)
chr1 (1-102)||(13723516-13723617)
chr1 (1-58)||(28723691-28723748)
chr1 (1-65)||(15911590-15911654)
chr1 (1-49)||(31808010-31808058)
chr1 (7-107)||(36084929-36085029)
chr1 (1-48)||(8984699-8984746)
chr1 (11-110)||(35001318-35001417)
chr1 (1-71)||(4813500-4813570)
chr1 (1-71)||(23982630-23982700)
chr1 (1-71)||(30336054-30336124)
chr1 (1-71)||(30898601-30898671)
chr1 (1-71)||(32152153-32152223)
chr1 (1-60)||(41737131-41737190)
chr1 (1-84)||(44395517-44395600)
chr1 (1-48)||(46495327-46495374)
chr1 (1-71)||(15512819-15512889)
chr1 (1-71)||(28949002-28949072)
chr1 (1-71)||(32144306-32144376)
chr1 (7-69)||(46591099-46591161)
chr1 (1-71)||(47754680-47754750)
chr1 (6-71)||(27531094-27531159)
chr1 (1-46)||(47070999-47071044)
chr1 (1-65)||(13352835-13352899)
chr1 (1-41)||(34102361-34102401)
chr1 (1-48)||(2342922-2342969)
chr1 (1-72)||(24414994-24415065)
chr1 (1-60)||(51996961-51997020)
chr1 (25-107)||(10160678-10160760)
chr1 (1-71)||(31305313-31305383)
chr1 (1-42)||(16395586-16395627)
chr1 (1-70)||(50692405-50692474)
chr1 (1-101)||(8877737-8877837)
chr1 (1-41)||(9684756-9684796)
chr1 (1-49)||(35366022-35366070)
chr1 (7-43)||(44163255-44163291)
chr1 (1-72)||(47643536-47643605)
chr1 (6-60)||(13698594-13698648)
chr1 (5-35)||(25063241-25063271)
chr1 (7-49)||(28679865-28679907)
chr1 (7-49)||(34012074-34012116)
chr1 (1-58)||(25258338-25258395)
chr1 (1-46)||(40261615-40261660)
chr1 (7-48)||(47133483-47133524)
chr1 (9-41)||(12706004-12706036)
[»] scaffold1091 (1 HSPs)
scaffold1091 (1-71)||(1952-2022)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-71)||(214614-214684)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-48)||(38519-38563)
[»] scaffold0182 (1 HSPs)
scaffold0182 (4-107)||(22025-22123)
[»] scaffold0013 (1 HSPs)
scaffold0013 (7-71)||(49132-49196)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-58)||(99856-99913)


Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 36726212 - 36726459
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||| ||||||    
T  36726212 atttggtaatattaacacacaaaacaaacacattaattacactaacaacatctcttaagagatgcgaaaaaggcaatggatgcctacattaagggacgga 36726311  T
Q  101 ggaagtatttttaaacttctatatatctttatctctccaaaataaaagaaatagagagactgataaatggagagaatcttgactttattttttgtagtta 200  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  36726312 ggaagtatttttaaaattctatgtatctttatctctcc-aaataaaagaaatggagagactgataaatggagagaatcctgactttattttttttagcta 36726410  T
Q  201 catttcaatttcatcatttagatggatagaggatctcttgatattagta 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36726411 catttcaatttcatcatttagatggatagaggatctcttgatattagta 36726459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4089539 - 4089646
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||| |||||||||||||||||||| || |||    
T  4089539 atttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagtcaatggatgcctacattaagggaagga 4089638  T
Q  101 ggaagtat 108  Q
    || |||||    
T  4089639 gggagtat 4089646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 36116387 - 36116287
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||||||| |||||||| |||| |||||||||||| |||||||||||||| ||||||    
T  36116387 atttcgtaatattaacacataaaacagacacattaattacaccgacaacatttcttaagaaatgtgaaaaagacaatgaatgcctacattaagggacgga 36116288  T
Q  101 g 101  Q
    |    
T  36116287 g 36116287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 37673797 - 37673711
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||| || ||||||||||    
T  37673797 taatattaacacacaaaacagacacattaattacactcacaacatttcttaagaaatgtgaaaaagacaatgggtgtctacattaag 37673711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18122081 - 18122179
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgg 99  Q
    |||| |||||||||||||| |||||||||||| |||||||||| ||||| | |||||||| |||| ||||||||||||||||  |||||||||||||||    
T  18122081 atttagtaatattaacacataaaacagacacactaattacactcacaacttttcttaagaaatgtgaaaaagacaatggatgtatacattaagagacgg 18122179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 48767630 - 48767524
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | | |||||| |||| |||||  |||||| ||||||||||||| |||| |    
T  48767630 atttcgtaatattaacacacaaaacagacacattaattacactgacaacgttttttaagaaatgtgaaaaaagcaatgggtgcctacattaagggacgta 48767531  T
Q  101 ggaagta 107  Q
    || ||||    
T  48767530 gggagta 48767524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 49100737 - 49100629
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||| | | ||||||||||  |||||| |||||| || |||||||||| ||| ||    
T  49100737 atttcgtaatattaacacataaaacagacacattaattacactgacaacttattttaagagatgcgaaaaaggcaatgggtggctacattaagggacaga 49100638  T
Q  101 ggaagtatt 109  Q
    || ||||||    
T  49100637 gggagtatt 49100629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10685151 - 10685044
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt-aaaaaagacaatggatgcctacattaagagacgg 99  Q
    |||| |||||||||||||| ||||||||||||||||||||||| | ||| | |||||||| || | |||||||||||||  |||||||||||||||| ||    
T  10685151 atttcgtaatattaacacataaaacagacacattaattacactgataacttttcttaagaaatatgaaaaaagacaatgagtgcctacattaagagatgg 10685052  T
Q  100 aggaagta 107  Q
    ||| ||||    
T  10685051 agggagta 10685044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1324774 - 1324668
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| | ||||| |||||||| |||| |||||| |||||  ||  ||||||||| ||| ||    
T  1324774 atttgataagattaacacacaaaacagacacattaattacactgataacatttcttaagaaatgtgaaaaaggcaatgagtggatacattaagggacaga 1324675  T
Q  101 ggaagta 107  Q
    || ||||    
T  1324674 gggagta 1324668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20123516 - 20123446
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||    
T  20123516 atttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 20123446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40211316 - 40211405
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacatt 90  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||  | |||||| | || | ||||||||||||| ||| ||||||    
T  40211316 atttcgtaatattaacacacaaaacagacacattaattacacaaacaatttttcttaaaaaatatgaaaaagacaatgggtgcttacatt 40211405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40741016 - 40740944
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaaga 73  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||| | |||||||| |||| |||||||    
T  40741016 atttggtaatattaacacacaaaatagacatattaattacattaacaacttttcttaagaaatgtgaaaaaga 40740944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25750434 - 25750359
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | | |||||| |||| ||||| ||||    
T  25750434 attttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaatacaa 25750359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48193681 - 48193634
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  48193681 atttggtaatattaacacacaaaatagacacattaattacactaacaa 48193634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6376172 - 6376242
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||  | |||||||| |||| |||||    
T  6376172 atttagtaatattaacacacaaaacagagacattaattacactaacaatttttcttaagaaatgtgaaaaa 6376242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 35128444 - 35128353
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||| | |||||  | |||| ||||||||||| | ||| ||||||||| ||||||    
T  35128444 taatattaacacacaaaacagacatattaattacactgacaacttttctta--aaatgtgaaaaagacaataggtgcttacattaagggacgga 35128353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29636079 - 29636136
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||    
T  29636079 atttggtaatattaacacacaaaacagacacattaattacattgacaacttttcttaa 29636136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 19236109 - 19236176
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| | ||||| || |||| |||||    
T  19236109 tggtaatattaacatacaaaaccgacacattaattacactaacaacttttcttacgaaatgtgaaaaa 19236176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2276616 - 2276686
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||||||||| ||||| |||||| ||||| | | |||||| |||| |||||    
T  2276616 atttggtaatattaacacacaaaacagacaaattaactacactgacaacttttgttaagaaatgtgaaaaa 2276686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 5334435 - 5334481
Alignment:
Q  2 tttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||    
T  5334435 tttggtaatattaacatacaaaacaaacacattaattacactaacaa 5334481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21388308 - 21388238
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||  | |||||||| |||| |||||    
T  21388308 atttagtaatattaacacacaaaacagacacattaattacaccgacaaattttcttaagaaatgtgaaaaa 21388238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21801095 - 21801165
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||||||||||||||||||||||||||||   ||||| | |||||||| |||| |||||    
T  21801095 atttagtaatattaacacacaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaaaaa 21801165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37048101 - 37048031
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||| || ||||||||||||||||||||||||||||||||| | ||| | |||||||| |||| |||||    
T  37048101 atttgggaacattaacacacaaaacagacacattaattacactgataacttttcttaagaaatgtgaaaaa 37048031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37491658 - 37491728
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||| | |||| ||||||||||||| |||||||||| | |||||||| |||| |||||    
T  37491658 atttggtaatattaacatataaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaa 37491728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48610175 - 48610267
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    |||| |||||||||| ||||||||||||||||||||||||| | ||||| | |||||| | |||| |||||  |||| |||  ||||||||||    
T  48610175 atttcgtaatattaatacacaaaacagacacattaattacagtgacaacttttcttaaaaaatgtgaaaaatgcaatagatagctacattaag 48610267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21392932 - 21392979
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||    
T  21392932 atttggtaatattaacactcaaaatagacacattaattgcactaacaa 21392979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21809686 - 21809761
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    |||| |||||||||||||| |||||||||||||||||||||   ||||| | |||||||| |||| ||||| ||||    
T  21809686 atttagtaatattaacacaaaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaaaaatacaa 21809761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27213553 - 27213478
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    |||| ||||||||||||||||||| ||||| |||| || |||||||||| | |||||||| |||| ||||| ||||    
T  27213553 atttagtaatattaacacacaaaatagacatattagttgcactaacaacttttcttaagaaatgtgaaaaatacaa 27213478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29723527 - 29723421
Alignment:
Q  1 atttggtaatattaacacacaaaa-cagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgg 99  Q
    |||| ||||||||| ||||||||| ||| ||||||||||||| | ||||  | ||| || | |||| ||||||||||||| ||||||||||||| |||||    
T  29723527 atttcgtaatattaccacacaaaaacaggcacattaattacaatgacaaattttctaaaaa-atgtgaaaaagacaatgggtgcctacattaagggacgg 29723429  T
Q  100 aggaagta 107  Q
    ||| ||||    
T  29723428 agggagta 29723421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29993041 - 29992982
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    |||||||| |||||||| |||||| ||||||||||||| |||||||||| | ||||||||    
T  29993041 atttggtagtattaacatacaaaatagacacattaattgcactaacaacttttcttaaga 29992982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 23037378 - 23037305
Alignment:
Q  106 tatttttaaacttctatatatctttatctctccaaaataaaagaaatagagagactgataaatggagagaatctt 180  Q
    ||||| ||||||||| | ||| |||||||||| ||||| |||||||| |||||||| ||||| ||||||||||||    
T  23037378 tatttctaaacttctttgtatttttatctctc-aaaatgaaagaaattgagagactaataaagggagagaatctt 23037305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31373737 - 31373807
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||||||||||| ||||||||||||| | |||||||  | |||||||| |||| |||||    
T  31373737 atttagtaatattaacacacaaaatagacacattaattgccctaacaatttttcttaagaaatgtgaaaaa 31373807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 43465189 - 43465231
Alignment:
Q  8 aatattaacacacaaaacagacacattaattacactaacaaca 50  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  43465189 aatactaacacacaaaacagacacattaattacactgacaaca 43465231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46783880 - 46783950
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||| || | ||||||||||||| |||||| ||| | |||||||| |||| |||||    
T  46783880 atttggtaatattaacacataagatagacacattaatttcactaataacttttcttaagaaatgtgaaaaa 46783950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 10595146 - 10595206
Alignment:
Q  11 attaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||| |||||||| ||| ||||| | |||||||| |||| |||||    
T  10595146 attaacacacaaaacagacatattaattatactgacaacttttcttaagaaatgtgaaaaa 10595206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40263777 - 40263705
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaaga 73  Q
    |||| ||||||||||||  |||||||||||||||||||||||  ||||| | |||||| | |||| |||||||    
T  40263777 attttgtaatattaacaatcaaaacagacacattaattacaccgacaacttttcttaaaaaatgtgaaaaaga 40263705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26632912 - 26632865
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||    
T  26632912 atttagtaatattaacacataaaatagacacattaactacactaacaa 26632865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33181361 - 33181302
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||||||||||||| | |||||||| ||||||||| |||||| ||||||| | ||||||    
T  33181361 atttggtaatattaatatacaaaacaaacacattaactacactgacaacattttttaaga 33181302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 41672614 - 41672653
Alignment:
Q  9 atattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  41672614 atattcacacacaaaatagacacattaattacactaacaa 41672653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 47458245 - 47458280
Alignment:
Q  68 aaaagacaatggatgcctacattaagagacggagga 103  Q
    |||||||||||||||||||||||||| |||||||||    
T  47458245 aaaagacaatggatgcctacattaagggacggagga 47458280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28663821 - 28663752
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||||||||||||||| |||||||||||||  | ||||||| | |||||||| |||| |||||    
T  28663821 atttgataatattaacacacaaaatagacacattaattgtattaacaac-tttcttaagaaatgtgaaaaa 28663752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42993227 - 42993297
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| ||||||||||||| |||| |||||| ||||||  | ||||||| | |||||||| ||||||||||    
T  42993227 atttgataatattaacacataaaatagacacgttaattgtattaacaacttttcttaagaaatgtaaaaaa 42993297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21752594 - 21752546
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||||||||||||||| ||||||| | ||| ||||||| ||||||||||    
T  21752594 atttggtaatattaacccacaaaataaacaaattaattgcactaacaac 21752546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35960444 - 35960344
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||| || ||| |||| |||||||||||||  ||||||||  | | |||||  |||| ||||| ||||||||||| |||||| || ||||||    
T  35960444 atttagtaatataaatacataaaatagacacattaattgtactaacaattttttttaaggaatgtgaaaaatacaatggatgcttacattcagggacgga 35960345  T
Q  101 g 101  Q
    |    
T  35960344 g 35960344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24512207 - 24512320
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||  | |||||| | |||| ||||||| ||||||||||||||||||| ||||||    
T  24512207 atttgataatattaacacacaaaacagacacattaattacactgacaaattttcttaaaaaatgtgaaaaagataatggatgcctacattaagggacgga 24512306  T
Q  101 ggaagtatttttaa 114  Q
    ||||||||||||||    
T  24512307 ggaagtatttttaa 24512320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25198355 - 25198264
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaa 92  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| | |||||||| |||| |||||| |||||||||||||||||||    
T  25198355 atttggtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaatggatgcctacattaa 25198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 37956182 - 37956081
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaag 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||| | ||||||||||| |||||||| ||    
T  37956182 gtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatgg-tacctacattaagggacggagggag 37956084  T
Q  106 tat 108  Q
    |||    
T  37956083 tat 37956081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40337231 - 40337337
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||| |||||||| |||||||||||| ||| | ||| | || ||||| |||| ||||||||||||||||||||||||||| ||||||    
T  40337231 attttgtaatattaacatacaaaacatacacattaattatactgataacttttcataagaaatgtgaaaaagacaatggatgcctacattaagggacgga 40337330  T
Q  101 ggaagta 107  Q
    || ||||    
T  40337331 gggagta 40337337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7772578 - 7772481
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacg 98  Q
    |||| |||||||||||||||||||||||||||||||||||| | ||||| | |||||| | |||||||||||||||| |||| |||| ||||| ||||    
T  7772578 atttcgtaatattaacacacaaaacagacacattaattacaatgacaacttttcttaaaaaatgtaaaaaagacaatagatggctacgttaagggacg 7772481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25185096 - 25184999
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacg 98  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||| | |||||||| |||| |||||| |||||| ||| ||||||||| ||||    
T  25185096 atttcgtaatattaacacacaaaacagacacattagttacactgacaacttttcttaagaaatgtgaaaaaggcaatgggtgcatacattaagggacg 25184999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 38773388 - 38773500
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctctt-aagagatgtaaaaaagacaatggatgcctacattaagagacgg 99  Q
    |||| ||||| ||||||||||||||||||||||||||| |||| ||||| | | || |||| |||| ||||||||||||| ||||||||||||| |||||    
T  38773388 atttcgtaatgttaacacacaaaacagacacattaattgcactgacaacttttttttaagaaatgtgaaaaagacaatggttgcctacattaagggacgg 38773487  T
Q  100 aggaagtattttt 112  Q
    ||| |||| ||||    
T  38773488 agggagtaatttt 38773500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38770227 - 38770333
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||| | |||||||||||||||| ||||| | |||||||| || | ||||||||||||  |||||||||||||  |||||    
T  38770227 atttcgtaatattaacacacaaaataaacacattaattacactgacaacttatcttaagaaatatgaaaaagacaatgcgtgcctacattaaggaacgga 38770326  T
Q  101 ggaagta 107  Q
    || ||||    
T  38770327 gggagta 38770333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 57228 - 57329
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||| | |||||||| |||| ||||| |||||   |||||| |||||| ||||||    
T  57228 atttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaaaaaaacaataagtgcctatattaagggacgga 57327  T
Q  101 gg 102  Q
    ||    
T  57328 gg 57329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37141792 - 37141684
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||| | | |||| | |||| |||||  |||| | ||| ||||||||||||||||    
T  37141792 atttcgtaatattaacacacaaaacagatacattaattacactgacaactttttttaaaaaatgtgaaaaatgcaataggtgcttacattaagagacgga 37141693  T
Q  101 ggaagtatt 109  Q
    || ||||||    
T  37141692 gggagtatt 37141684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 26878768 - 26878839
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaag 72  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||||| |||| ||||||    
T  26878768 atttggtaatattaacacacaaaatagacacattaattacattaacaacttttcttaagaaatgtgaaaaag 26878839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14522644 - 14522714
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||  | |||||||| |||| |||||    
T  14522644 atttggtaatattaacacacaaaacatacacattaattacactaacaatttttcttaagaaatgtgaaaaa 14522714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14577692 - 14577762
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||| |||| |||||    
T  14577692 atttggtaatattaacaaacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 14577762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 4273955 - 4274024
Alignment:
Q  8 aatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaat 77  Q
    |||||||||||| |||||| ||||||||||||||||||||| || |||||||| |||| |||||||||||    
T  4273955 aatattaacacataaaacaaacacattaattacactaacaatatttcttaagaaatgtgaaaaagacaat 4274024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 39543709 - 39543794
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaa 92  Q
    |||||||||| |||||||||||||||||||||||||  ||||||| |||||||| || | |||||| |||| | ||||||||||||    
T  39543709 taatattaacgcacaaaacagacacattaattacacggacaacatttcttaagaaatatgaaaaaggcaataggtgcctacattaa 39543794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 16002769 - 16002873
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagt 106  Q
    ||||||||||||||||||| ||||||||||||||||  ||||| | |||||| | |||| ||||||  ||||| || |||||||||| |||||| | |||    
T  16002769 taatattaacacacaaaactgacacattaattacacagacaacttttcttaaaaaatgtgaaaaaggaaatgggtgtctacattaagggacggatggagt 16002868  T
Q  107 atttt 111  Q
    |||||    
T  16002869 atttt 16002873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38203032 - 38203138
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||||| ||| |||||||||||  ||||| | | |||||| |||| ||||||| || || ||||||||||||  ||||||    
T  38203032 atttcgtaatattaacacacaaaacaaacatattaattacaccgacaacttttattaagaaatgtgaaaaagataacgggtgcctacattaaaggacgga 38203131  T
Q  101 ggaagta 107  Q
    || ||||    
T  38203132 gggagta 38203138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 25888655 - 25888586
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    ||||||||||| |||||| ||||| |||||||||||||||||| | |||||||| |||||||||| ||||    
T  25888655 taatattaacatacaaaatagacatattaattacactaacaacttttcttaagaaatgtaaaaaatacaa 25888586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41087040 - 41086971
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaa 70  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| |||| || |||||||| |||| ||||    
T  41087040 atttgataatattaacacacaaatcagacacattaattacactgacaatatttcttaagaaatgtgaaaa 41086971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 38761404 - 38761504
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagt 106  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | | |||| | || | ||||||| |||   ||||||||||||| ||| |||| |||    
T  38761404 taatattaacacacaaaacagacacattaattacactgacaactttttttaataaatatgaaaaagataatatgtgcctacattaagggacagagggagt 38761503  T
Q  107 a 107  Q
    |    
T  38761504 a 38761504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5191589 - 5191658
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||| |||| |||||    
T  5191589 atttggtaatattaacacacaaaacagacacattaattgc-ctaacaatttttcttaagaaatgtgaaaaa 5191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 16644084 - 16644146
Alignment:
Q  9 atattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||| | |||||||||||||||||||||| | |||||||| |||| |||||    
T  16644084 atattaacacacaaaatatacacattaattacactaacaacttttcttaagaaatgtgaaaaa 16644146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24962405 - 24962475
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||| |||||    
T  24962405 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 24962475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31252695 - 31252737
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacact 43  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  31252695 atttcgtaatattaacacacaaaacagacacattaattacact 31252737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31746445 - 31746515
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||  | |||||||| |||| |||||    
T  31746445 attttgtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaagaaatgtgaaaaa 31746515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43980623 - 43980693
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||| |||||    
T  43980623 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 43980693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30262578 - 30262626
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  30262578 atttggtaatattaacatacaaaatagacacattaattgcactaacaac 30262626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 45203822 - 45203755
Alignment:
Q  3 ttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| || || |||||||| ||||||||||    
T  45203822 ttggtaatattaacatacaaaatagacacattaattgcactaa-aaaatttcttaagaaatgtaaaaaa 45203755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 1769490 - 1769584
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacg 98  Q
    |||||||||||||| ||||||     |||||||||||||| | ||||| |||||| | |||| |||||   ||||||||||||||||||||||||    
T  1769490 tggtaatattaacatacaaaaggagtacattaattacactgataacatttcttaaaaaatgtgaaaaaagtaatggatgcctacattaagagacg 1769584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2562770 - 2562812
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacact 43  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  2562770 atttcgtaatattaacatacaaaacagacacattaattacact 2562812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3113573 - 3113615
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacact 43  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  3113573 atttgataatattaacacacaaaacagacatattaattacact 3113615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22590441 - 22590371
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||| ||||||||||| |||| ||||||||||||| |||||||||  | |||||||| |||| |||||    
T  22590441 atttggtgatattaacacaaaaaatagacacattaattgcactaacaaattttcttaagaaatgtgaaaaa 22590371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36437567 - 36437521
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaaca 47  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  36437567 atttggtaatgttaacacacaaaatagacacattaattgcactaaca 36437521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40790854 - 40790785
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||| ||||| | |||||||| |||| |||||    
T  40790854 atttggtaatattaatacacaaa-cagacgcattaattacactgacaacttttcttaagaaatgtgaaaaa 40790785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40517806 - 40517773
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacatt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  40517806 atttggtaatattaacacacaaaacagacacatt 40517773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 7172279 - 7172215
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||| ||||||||||||||||| || ||  | |||||||| |||| |||||    
T  7172279 taatattaacacacaaaatagacacattaattacaccaaaaagttttcttaagaaatgtgaaaaa 7172215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12762908 - 12762860
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||| ||||||||||||||||||| ||||||||||||| || |||||||    
T  12762908 atttagtaatattaacacacaaaatagacacattaattgcattaacaac 12762860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14906667 - 14906627
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  14906667 atttggtaatattaacacacaaaatagacatattaattaca 14906627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24276597 - 24276666
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaag 72  Q
    |||||||||||||||||||||| |  ||||||||||||| ||||||||| | | |||||| |||| ||||||    
T  24276597 atttggtaatattaacacacaata--gacacattaattatactaacaactttttttaagaaatgtgaaaaag 24276666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 32957750 - 32957794
Alignment:
Q  140 aaataaaagaaatagagagactgataaatggagagaatcttgact 184  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||    
T  32957750 aaataaaagaaattgagagactaataaatggagaggatcttgact 32957794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1177196 - 1177239
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacacta 44  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
T  1177196 atttcgtaatattaatatacaaaacagacacattaattacacta 1177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3006821 - 3006880
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    |||| |||||||||||||| |||| ||||| |||||||| ||||||||| | ||||||||    
T  3006821 atttagtaatattaacacataaaatagacatattaattatactaacaacttttcttaaga 3006880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 14846964 - 14847031
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||| |||||| ||||||||||||||||||  ||||| | |||||| | |||| |||||    
T  14846964 tggtaatattaacgcacaaagcagacacattaattacaccgacaacttttcttaaaaaatgtgaaaaa 14847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34882736 - 34882689
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||| |||||||||||||||||| ||||||||||||| || ||||||    
T  34882736 atttgataatattaacacacaaaatagacacattaattgcattaacaa 34882689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36309636 - 36309675
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattac 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  36309636 atttgataatattaacacacaaaatagacacattaattac 36309675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37600928 - 37600999
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaag 72  Q
    |||||| | |||||||||| ||| ||||||||||||||| ||| ||||||| |||||| | |||| ||||||    
T  37600928 atttggcagtattaacacataaatcagacacattaattatacttacaacatttcttaaaaaatgtgaaaaag 37600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 45283827 - 45283862
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattaca 41  Q
    |||||||||||||| |||||||||||||||||||||    
T  45283827 gtaatattaacacataaaacagacacattaattaca 45283862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31673662 - 31673621
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacac 42  Q
    ||||||||||||||||| |||||| | |||||||||||||||    
T  31673662 atttggtaatattaacatacaaaataaacacattaattacac 31673621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10396270 - 10396375
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||||  | |||||||||||| | ||||| | |||||| | |||| |||||   ||||| ||| |||| |||| ||||||    
T  10396270 atttcgtaatattaacacacaaaac--aaacattaattacattgacaacttttcttaataaatgtgaaaaatgaaatgggtgcatacaataagggacgga 10396367  T
Q  101 ggaagtat 108  Q
    || |||||    
T  10396368 gggagtat 10396375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 17933770 - 17933730
Alignment:
Q  2 tttggtaatatt-aacacacaaaacagacacattaattaca 41  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  17933770 tttggtaatatttaacacacaaaatagacacattaattaca 17933730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45185307 - 45185383
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaat 77  Q
    ||||| ||||||||| ||| |||||||||||||| ||||||   ||||| | |||||||| |||| ||||| |||||    
T  45185307 atttgataatattaatacataaaacagacacatttattacaacgacaacttttcttaagaaatgtgaaaaatacaat 45185383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5895797 - 5895691
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||| | |||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  5895797 atttcgtaatattaatacacaaaacagacacattaattacattaacaacttttcttaagaaatgtgaaaaagacaatggatgcctacattaagggacgga 5895698  T
Q  101 ggaagta 107  Q
    || ||||    
T  5895697 gggagta 5895691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 4250703 - 4250804
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaag 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||  | |||||||| ||||||||||||||||  || ||||||||||| ||| |||| ||    
T  4250703 gtaatattaacacacaaaacagacacattaattacactgacaatttttcttaagaaatgtaaaaaagacaataaatacctacattaagggacagagggag 4250802  T
Q  106 ta 107  Q
    ||    
T  4250803 ta 4250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15981860 - 15981785
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| |||| ||||| ||||    
T  15981860 atttggtaatattaacacacaaaacagacacattaattacaccaacaacttttcttaagaaatgtgaaaaatacaa 15981785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11302921 - 11302845
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaat 77  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||| | |||||||| |||| |||||||||||    
T  11302921 attttgtaatattaacacaaaaaacagacacattaattatactaacaacttttcttaagaaatgtgaaaaagacaat 11302845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34513258 - 34513353
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagaga 96  Q
    |||| |||||||||||||||||||||||||||||| |||  || ||||  | |||||| | |||||||||| |||||||| |||||||||||||||    
T  34513258 atttcgtaatattaacacacaaaacagacacattatttatgctgacaaattttcttaaaaaatgtaaaaaaaacaatggacgcctacattaagaga 34513353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3729455 - 3729385
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||  | |||||||| ||||||||||    
T  3729455 atttggtaatattaacacacaaaatagacacattaattacaccaacaatttttcttaagaaatgtaaaaaa 3729385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22410883 - 22410953
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||| |||| |||||    
T  22410883 atttggtaatattaacataaaaaacagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 22410953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31945952 - 31946022
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||| |||| |||||    
T  31945952 atttggtaatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaaaaa 31946022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5084577 - 5084687
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacatt----aattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagaga 96  Q
    ||||| |||||||||||||||||||| |||||||    ||||||||||||||| | |||||||| |||| |||| |||||| |||||||| |||||   |    
T  5084577 atttgataatattaacacacaaaacaaacacatttattaattacactaacaacttttcttaagaaatgtgaaaaggacaatagatgcctatattaaagta 5084676  T
Q  97 cggaggaagta 107  Q
    |||||||||||    
T  5084677 cggaggaagta 5084687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9461359 - 9461252
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||| |||||| |||||||||||||||  ||||||| |||||| | |||| |||||||||||| ||  ||||| |||| ||||||    
T  9461359 atttagtaatattaacacataaaacaaacacattaattacaccgacaacatttcttaataaatgtgaaaaagacaatgaatttctaca-taagggacgga 9461261  T
Q  101 ggaagtatt 109  Q
    || ||||||    
T  9461260 gggagtatt 9461252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16327189 - 16327101
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacat 89  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||||| | |||||||| |||| ||||| |||| ||| || |||||    
T  16327189 atttggtaatattaacacacaaaacagacacattaattatattgacaacttttcttaagaaatgtgaaaaatacaaaggaggcttacat 16327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1763879 - 1763820
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  1763879 atttagtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaga 1763820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16350587 - 16350539
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  16350587 atttggtaatattaacacacaaaacagactcattaattacactgacaac 16350539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10669314 - 10669361
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  10669314 atttggtaatattaacacacaaaatagacacattaattgcactaacaa 10669361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12514625 - 12514672
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  12514625 atttggtaatattaacacacaaaatagacacattaattgcactaacaa 12514672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 16186629 - 16186538
Alignment:
Q  11 attaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggagg 102  Q
    ||||||| ||||||||||||||||||||||||||| ||| | |||||  | |||| ||||||| ||||| || |||||||||| || |||||    
T  16186629 attaacatacaaaacagacacattaattacactaataacttttcttacaaaatgtgaaaaagataatgggtggctacattaagggatggagg 16186538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19838997 - 19838927
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||| |||||    
T  19838997 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 19838927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30466008 - 30466078
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||||| ||| |||||||||||  ||||| | | |||||| ||||||||||    
T  30466008 atttggtaatattaacacacaaaacaaacatattaattacaccgacaacttttgttaagaaatgtaaaaaa 30466078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 28238357 - 28238401
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  28238357 tggtaatattaacacacaaaatagacacattaattatactaacaa 28238401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30248629 - 30248566
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||| | |||||||| ||||    
T  30248629 atttggtaatattaacacacaaaacaaacacattaa-tacacttacaacttttcttaagaaatgt 30248566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31536078 - 31536006
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaaga 73  Q
    ||||| ||||||||||| | |||| ||| | |||||||||||||||||| | |||||||| ||||||||||||    
T  31536078 atttgataatattaacaaataaaatagatatattaattacactaacaacttttcttaagaaatgtaaaaaaga 31536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 3887987 - 3888051
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaa 70  Q
    ||||||||||||||||||| ||||||||||| | || ||||||| | |||||||| |||| ||||    
T  3887987 gtaatattaacacacaaaatagacacattaactgcaataacaacttttcttaagaaatgtgaaaa 3888051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11081962 - 11081890
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaaga 73  Q
    ||||||||| ||||| ||| |||| ||| | |||||||||||||||||| | |||||||| |||| |||||||    
T  11081962 atttggtaacattaatacagaaaatagatatattaattacactaacaacttttcttaagatatgtgaaaaaga 11081890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20523038 - 20522979
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||||||||||| |||||||||  | || |||||||| |||||||||||| ||||||||    
T  20523038 atttggtaatattgacacacaaactaaactcattaattgcactaacaacatttcttaaga 20522979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1514268 - 1514316
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||||||||||||||| |||||| | ||| ||||||| ||||||||||    
T  1514268 atttggtaatattaacatacaaaataaacatattaattgcactaacaac 1514316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16070497 - 16070391
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||| ||||||||||| | ||||||||||||| ||||||    
T  16070497 atttggtaatattaacacacaaaacagacacattaattacactgacagcatttcttaagaaatgtgaaaaagacaataggtgcctacattaagggacgga 16070398  T
Q  101 ggaagta 107  Q
    || ||||    
T  16070397 gggagta 16070391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5448728 - 5448628
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||| | | | ||||| |||||||| |||| |||||| |||||||||||||||||||| ||||||    
T  5448728 atttcgtaatattaacacacaaaacagacacattaattatattgataacatttcttaagaaatgtgaaaaaggcaatggatgcctacattaagggacgga 5448629  T
Q  101 g 101  Q
    |    
T  5448628 g 5448628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 46729371 - 46729265
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| | |||| |||||||||||| ||| |||||||||| |||| |    
T  46729371 atttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaa-aaatgtgaaaaagacaatgaatgtctacattaagggacgaa 46729273  T
Q  101 ggaagtat 108  Q
    ||||||||    
T  46729272 ggaagtat 46729265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25477291 - 25477199
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| |||| |||||  ||||||||||||||||||||    
T  25477291 attttgtaatattaacacataaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaatggatgcctacattaag 25477199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 48472534 - 48472642
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctctt-aagagatgtaaaaaagacaatggatgcctacattaagagacgg 99  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||||| | |||| || | |||| ||||||||||||||||||||||||||| ||| |    
T  48472534 atttcgtaatattaacacacaaaatagacacattaattacactgacaacttttcttaaaaaaatgtgaaaaagacaatggatgcctacattaagggacag 48472633  T
Q  100 aggaagtat 108  Q
    | |||||||    
T  48472634 atgaagtat 48472642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 24072827 - 24072745
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacat 89  Q
    ||||||||||||| ||||||||||||||||||||| | ||||| | |||||||| |||||||||||||||||| |||||||||    
T  24072827 taatattaacacaaaaaacagacacattaattacattgacaacttttcttaagaaatgtaaaaaagacaatgggtgcctacat 24072745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 50782844 - 50782742
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||| | |||||||| |||| ||||||| | ||| |||||| |||||| ||||||    
T  50782844 atttcgtaatattaagacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagatattgggtgcctatattaagggacgga 50782745  T
Q  101 gga 103  Q
    |||    
T  50782744 gga 50782742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39237628 - 39237738
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatgga----tgcctacattaagaga 96  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||| | |||||| | |||| ||||||||||||||    ||||||||||||| ||    
T  39237628 atttcgtaatattaacacacaaaacagatacattaattacactgacaacttttcttaaaaaatgtgaaaaagacaatggatgcgtgcctacattaaggga 39237727  T
Q  97 cggaggaagta 107  Q
    |||||| ||||    
T  39237728 cggagggagta 39237738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20262433 - 20262539
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||| |||||  || ||| |||||| ||| ||    
T  20262433 atttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaatgagtgtctatattaagggacaga 20262532  T
Q  101 ggaagta 107  Q
    || ||||    
T  20262533 gggagta 20262539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 54438576 - 54438484
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    |||| |||||||||||||||||||||||||| ||||||| ||  ||||  | |||||||| |||| ||||||||||||||| |||||||||||    
T  54438576 atttcgtaatattaacacacaaaacagacactttaattatacggacaatttttcttaagaaatgtgaaaaagacaatggatacctacattaag 54438484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30153261 - 30153331
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||    
T  30153261 atttggtaatattatcacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 30153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 51787837 - 51787731
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||| | |||||||| |||| |||||   ||||  |||||||||||||  |||||    
T  51787837 atttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaaaaatggaatgagtgcctacattaaggaacgga 51787738  T
Q  101 ggaagta 107  Q
    || ||||    
T  51787737 gggagta 51787731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 52226085 - 52225979
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||| ||||||||||| | ||||||||||||||||||| ||| ||||||| |||||| | |||| ||||||||||| | | ||||||||||  ||||||    
T  52226085 atttgataatattaacatataaaacagacacattaattatactgacaacatttcttaaaaaatgtgaaaaagacaataggtacctacattaaaggacgga 52225986  T
Q  101 ggaagta 107  Q
    || ||||    
T  52225985 gggagta 52225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13096581 - 13096638
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  13096581 atttggtaatattaacacacaacacagacacattaattacactaacaacttttcttaa 13096638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 29584960 - 29584849
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||  | |||||||| |||| |||||  ||| || ||| |||||  |  ||||||    
T  29584960 atttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaatgcaaagggtgcttacatacatggacgga 29584861  T
Q  101 ggaagtattttt 112  Q
     |||||||||||    
T  29584860 tgaagtattttt 29584849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3094248 - 3094178
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||| | |||||||| |||| |||||    
T  3094248 atttggtaatattaacacacaaaatagacacattaattactttaacaacttttcttaagaaatgtcaaaaa 3094178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14602694 - 14602764
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||| | |||||||| |||| |||||    
T  14602694 atttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 14602764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31486554 - 31486484
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||| |||||    
T  31486554 atttagtaatattaacacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaa 31486484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37175061 - 37175130
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||||| |||| |||||    
T  37175061 atttggtaatattaacacacaaaatagacacattaattacac-aacaacttttcttaagaaatgtgaaaaa 37175130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38136421 - 38136351
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||  | |||||||| |||| |||||    
T  38136421 atttgataatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaaaaa 38136351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5536563 - 5536474
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacatt 90  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| ||||  | |||||||| |||| |||||| | |||| ||||||||||    
T  5536563 atttcgtagtattaacacgcaaaacagacacattaattacactgacaatttttcttaagaaatgtgaaaaaggctatgggtgcctacatt 5536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45628113 - 45628170
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||    
T  45628113 atttggtaatattaatacacaaaacagacacatcaattacactaacaacttttcttaa 45628170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34543768 - 34543704
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| | |||||||| ||||    
T  34543768 atttggtaatattaacacacaaaatagacacattaattacacggacaacttttcttaagaaatgt 34543704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12624762 - 12624692
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| || ||||||||||||||||||||| | |||||||| |||| |||||    
T  12624762 atttagtaatattaacacataaaatagtcacattaattacactaacaacttttcttaagaaatgtgaaaaa 12624692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20185695 - 20185765
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||  | |||||||| |||| |||||    
T  20185695 atttggtaatattaacacacaaaacttgcacattaattacactaacaaattttcttaagaaatgtgaaaaa 20185765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22750881 - 22750951
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||| |||||||||||| |||||||||||||  ||||| | |||||||| |||| |||||    
T  22750881 atttggtaatattaatacacaaaacagatacattaattacacagacaacttttcttaagaaatgtgaaaaa 22750951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28116544 - 28116614
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||| | |||||| | |||| |||||    
T  28116544 atttggcaatattaacacacaaaatagacatattaattacactaacaacttttcttaaaaaatgtgaaaaa 28116614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32236897 - 32236847
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacat 51  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  32236897 atttgataatattaacacacaaaacagacatattaattacactgacaacat 32236847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41920077 - 41920147
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| ||| | ||||||| |||||||||| | |||||||| |||| |||||    
T  41920077 atttggtaatattaacacacaaaatagaaatattaattgcactaacaacttttcttaagaaatgtgaaaaa 41920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43800874 - 43800832
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacact 43  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  43800874 atttggtaatattaacacacaaaacagacaccttaattacact 43800832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 52198767 - 52198837
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||| | |||||||| |||| |||||    
T  52198767 atttggtaatattaatacacagaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaa 52198837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 56373383 - 56373453
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||  | |||||||| |||| |||||    
T  56373383 atttggtaatattaacacacaaaataaacacattaattgcactaacaatttttcttaagaaatgtgaaaaa 56373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5932952 - 5932895
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    ||||| |||||||||||||||||||| |||||||||||||||| ||||| | ||||||    
T  5932952 atttgataatattaacacacaaaacaaacacattaattacactgacaacttttcttaa 5932895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33246536 - 33246593
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||| | ||||||    
T  33246536 atttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaa 33246593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 52552550 - 52552649
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||| ||||| | |||||| | | || |||| | || ||| ||||||||||||| ||||||    
T  52552550 atttggtaatattaacacataaagcagacaaatttattacactgacaacttttcttaaaaaacgtgaaaagggcattgggtgcctacattaagggacgga 52552649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19654494 - 19654448
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaaca 47  Q
    |||||||||||| |||||| |||| ||||||||||||||||||||||    
T  19654494 atttggtaatatcaacacataaaatagacacattaattacactaaca 19654448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20291406 - 20291336
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||| ||||||| |||||||||||||||| || |||| | |||||||| |||| |||||    
T  20291406 atttagtaatattaacccacaaaatagacacattaattacattaccaacttttcttaagaaatgtgaaaaa 20291336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 31937437 - 31937471
Alignment:
Q  7 taatattaacacacaaaacagacacattaattaca 41  Q
    |||||||||||||||||||||||||||||||||||    
T  31937437 taatattaacacacaaaacagacacattaattaca 31937471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37625164 - 37625234
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||||||||||| | |||||||||||| ||| ||||| | |||||||| |||| |||||    
T  37625164 atttagtaatattaacacacaaaataaacacattaattatactgacaacttttcttaagaaatgtgaaaaa 37625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10602245 - 10602302
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||| |||| | ||||||    
T  10602245 atttagtaatattaacacacaaaatagacaaattaattacactaccaacttttcttaa 10602302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 20791988 - 20791923
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||| | |||||||| ||||| ||||    
T  20791988 gtaatattaacacacaaaatagacatattaattgcactaccaacttttcttaagaaatgtagaaaa 20791923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22651530 - 22651460
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||| |||||| | |||||||||||||| ||| ||  | |||||||| |||| |||||    
T  22651530 atttggtaatattaacatacaaaataaacacattaattacattaataaattttcttaagaaatgtgaaaaa 22651460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43509147 - 43509079
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||||||||||||||||| |||||||||||||||  ||||| | |||||||| |||| |||||    
T  43509147 atttgataatattaacacacaaaaca-acacattaattacac-gacaacgtttcttaagaaatgtgaaaaa 43509079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 54359741 - 54359691
Alignment:
Q  10 tattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    |||||||||| ||||||||||||||||||| ||| ||||| | ||||||||    
T  54359741 tattaacacataaaacagacacattaattatactgacaacttttcttaaga 54359691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5168045 - 5168004
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacac 42  Q
    |||| ||||||||||| ||||||||||||| |||||||||||    
T  5168045 atttagtaatattaacgcacaaaacagacatattaattacac 5168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5416908 - 5416970
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    ||||||||||||||||| |||||| ||||||||||  ||||| |||||| | |||||||| ||||    
T  5416908 atttggtaatattaacaaacaaaatagacacatta--tacacaaacaacttttcttaagaaatgt 5416970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10541296 - 10541365
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaa 70  Q
    ||||||||||||||| |||||||| | | ||||||||| || ||||||| | |||| ||| |||||||||    
T  10541296 atttggtaatattaatacacaaaatatatacattaattgcattaacaacttttctttagaaatgtaaaaa 10541365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51918691 - 51918728
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaatt 38  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  51918691 atttggtaatactaacacacaaaatagacacattaatt 51918728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31840162 - 31840117
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||||||  | | |||||||||||||||||||    
T  31840162 atttggtaatattaacacacaaa--aaatacattaattacactaacaa 31840117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9718211 - 9718317
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||  ||||||||| |||||||||| ||||||    
T  9718211 atttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaaaaatgcaatggatggctacattaagggacgga 9718310  T
Q  101 ggaagta 107  Q
    || ||||    
T  9718311 gggagta 9718317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17251000 - 17251106
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| | |||||| | |||| ||||||||||| ||| ||||||||||||||||||    
T  17251000 attttgtaatattaacacacaaaacagacacattaattatactaacaacttttcttaaaaaatgtgaaaaagacaatagatacctacattaagagacgga 17251099  T
Q  101 ggaagta 107  Q
    || ||||    
T  17251100 gggagta 17251106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8065111 - 8065217
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || |||| |||| | ||||||  |||||||||||| ||||||    
T  8065111 atttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaggaaatgtgaaaagggcaatgggagcctacattaagggacgga 8065210  T
Q  101 ggaagta 107  Q
    || ||||    
T  8065211 gggagta 8065217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44424661 - 44424555
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||| | |||||||| |||| |||||  |||||  ||||||||||||| ||||||    
T  44424661 atttcgtaatattaacatacaaaacagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaatgagtgcctacattaagggacgga 44424562  T
Q  101 ggaagta 107  Q
    || ||||    
T  44424561 gggagta 44424555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41665776 - 41665668
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||| ||||||  ||||||||||||| ||||||    
T  41665776 atttgatactattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaaaaa-acaatgagtgcctacattaagggacgga 41665678  T
Q  101 ggaagtattt 110  Q
    |  |||||||    
T  41665677 gagagtattt 41665668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 15851591 - 15851491
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagt 106  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||| |||| |||||||||| ||| |||| |||    
T  15851591 taatattaacacaaaaaacagacacattaattacactcacaacttttcttaagaaatgtgaaaaagacaatagatgtctacattaagggacagagggagt 15851492  T
Q  107 a 107  Q
    |    
T  15851491 a 15851491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 13534471 - 13534380
Alignment:
Q  10 tattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggagg 102  Q
    ||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||  ||||| |||| | ||||||||||||| ||||||||    
T  13534471 tattaacacacaaaacaaacacattaattacactgacaacatttcttaagaaatgt-gaaaaggcaataggtgcctacattaagggacggagg 13534380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14420743 - 14420695
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14420743 atttggtaatattaacacacaaaacagacacattaattacactaacaac 14420695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31644481 - 31644589
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| | ||| | |||||  | |||| ||||||||||||||||||||||||||  ||||||    
T  31644481 attttgtaatattaacacaaaaaacagacacattaattaaactgataacttttcttataaaatgtgaaaaagacaatggatgcctacattaaaggacgga 31644580  T
Q  101 -ggaagtat 108  Q
     ||||||||    
T  31644581 tggaagtat 31644589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 35178832 - 35178924
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    |||| ||||||||| ||||||||||| ||||||||| |||||| ||||| | |||||||| |||| ||||| ||||||| |||||||||||||    
T  35178832 atttcgtaatattatcacacaaaacatacacattaactacactgacaacttttcttaagaaatgtgaaaaaaacaatgggtgcctacattaag 35178924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3237789 - 3237679
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaaca--tctcttaagagatgtaaaaaagacaatggatgcctacattaagagacg 98  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| ||||  | |||||| | |||| ||||||| ||| | | ||||||||||| ||||    
T  3237789 attttgtaatattaacacacaaaacagacacattaattacattaataacacttttcttaaaaaatgtgaaaaagataataggtacctacattaagggacg 3237690  T
Q  99 gaggaagtatt 109  Q
    |||| ||||||    
T  3237689 gagggagtatt 3237679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34330068 - 34329987
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatg 82  Q
    |||| ||||||||||||||||||||||  |||||||||| ||||||||| | | |||||| |||| ||||||||||||||||    
T  34330068 attttgtaatattaacacacaaaacaggtacattaattatactaacaactttttttaagaaatgtgaaaaagacaatggatg 34329987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 35241747 - 35241824
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatg 78  Q
    ||||| ||||||||||| ||||||||||||||||||||||||  ||||||| ||||| || ||||||||||| |||||    
T  35241747 atttgataatattaacaaacaaaacagacacattaattacacagacaacatttcttatgaaatgtaaaaaaggcaatg 35241824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37355102 - 37355031
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaag 72  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||| | |||||||| |||| ||||||    
T  37355102 attttgtaatattaacacacaaaagagacacattaattacacaaacaacttttcttaagaaatgtgaaaaag 37355031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 45214784 - 45214721
Alignment:
Q  8 aatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||    
T  45214784 aatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 45214721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2131823 - 2131753
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||  |||||| |||||||||| | |||||||| ||||||||||    
T  2131823 atttggtaatattaacacacaaaatagacatgttaattgcactaacaacttttcttaagaaatgtaaaaaa 2131753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27297643 - 27297597
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaaca 47  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27297643 attttgtaatattaacacacaaaacagacacattaattacactaaca 27297597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28264990 - 28265060
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||||| | |||||||| |||| |||||    
T  28264990 atttggtaatattaacgcacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaa 28265060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4398563 - 4398620
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  4398563 atttcgtaatattaacacacaaaatagacacattaattacactaacaacttttcttaa 4398620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 28733889 - 28733785
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||| |  |||||||||||||||||||||  ||||  | |||||| | |||| ||||||| ||||| ||||||||||||| |||| |    
T  28733889 atttggtaatattaacata--aaacagacacattaattacaccgacaatttttcttaaaaaatgtgaaaaagaaaatgggtgcctacattaagggacgaa 28733792  T
Q  101 ggaagta 107  Q
    || ||||    
T  28733791 gggagta 28733785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 247720 - 247678
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  247720 taatattaacacacaaaatagacacattaattacactaacaac 247678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4033647 - 4033577
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||||||| |||||||||||||||| ||| | |||||||| || |||||||    
T  4033647 atttagtaatattaacacagaaaacagaaacattaattacactaataacttttcttaagaaatataaaaaa 4033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17663690 - 17663620
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| || ||||||||||||||||||||| | |||||||| |||| |||||    
T  17663690 atttagtaatattaacacataaaataggcacattaattacactaacaacttttcttaagaaatgtgaaaaa 17663620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27749578 - 27749508
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||| |||||||||||||| |||||||||||| ||||| | |||||||| |||| |||||    
T  27749578 atttagtaatattaatacacaaaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaa 27749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41865782 - 41865712
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||| ||||||||||||| |||||||||||||| || |||||| | |||||||| |||| |||||    
T  41865782 atttggtaatgttaacacacaaaatagacacattaattagaccaacaacttttcttaagaaatgtgaaaaa 41865712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43650100 - 43650030
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||||  | ||| |||| ||||||||||    
T  43650100 atttagtaatattaacatacaaaacagacacattaattacactgacaatttttctaaagaaatgtaaaaaa 43650030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7255667 - 7255626
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacac 42  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  7255667 atttggtaatattaatacacaaaacagacacattaattacac 7255626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 1246458 - 1246542
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacatta 91  Q
    |||||||||||||||||||| |||| ||||||| ||| ||||| | | |||||| |||| |||||||||||| || |||| ||||    
T  1246458 taatattaacacacaaaacaaacacgttaattatactgacaactttttttaagaaatgtgaaaaagacaatgaatacctatatta 1246542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24774931 - 24774887
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaa 45  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  24774931 atttggtaatattaacacacaaaatagatacattaattacactaa 24774887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 2395849 - 2395798
Alignment:
Q  20 caaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||||||||||||||||||||| | |||||||| ||||||||||    
T  2395849 caaaatagacacattaattacactaacaacttttcttaagaaatgtaaaaaa 2395798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 14527685 - 14527642
Alignment:
Q  5 ggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  14527685 ggtaatattaacacacaaaatagacacattaattaccctaacaa 14527642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21012919 - 21012860
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||||| | ||||||||    
T  21012919 atttgataatattaacacacaaaataaacacattaattgcactaacaacttttcttaaga 21012860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3645389 - 3645319
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||| |||||||| ||||||||||| || ||||||||| | |||||||| |||| |||||    
T  3645389 atttagtaatattaatacacaaaatagacacattaagtaaactaacaacttttcttaagaaatgtgaaaaa 3645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11459219 - 11459149
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||||||||||||||||||| ||||||  ||||| | || ||||| |||| |||||    
T  11459219 atttagtaatattaacacacaaaacagacacattatttacaccgacaacttttcataagaaatgtgaaaaa 11459149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20362049 - 20361979
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||  | |||||||| |||| |||||    
T  20362049 atttagtaatattaacacataaaatagacacattaactacactaacaatttttcttaagaaatgtgaaaaa 20361979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44274706 - 44274776
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||| |||||||||||| ||||||||||||||||||||| | ||||| | |||||| | |||| |||||    
T  44274706 atttggcaatattaacacataaaacagacacattaattacattgacaacttttcttaaaaaatgtgaaaaa 44274776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44421515 - 44421445
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||| |||||||||| |||||||||||||| ||||  | |||||||| |||| |||||    
T  44421515 atttagtaatattaacaaacaaaacagatacattaattacactgacaatttttcttaagaaatgtgaaaaa 44421445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8384011 - 8384056
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaac 46  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||    
T  8384011 atttggtaatattaacacacaaaataaacacattaattgcactaac 8384056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 375384 - 375432
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||| ||||| |||||||||||| ||||||||||||||||| ||||||    
T  375384 atttgataatactaacacacaaaatagacacattaattacacaaacaac 375432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38449753 - 38449793
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  38449753 atttgataatattaatacacaaaacagacacattaattaca 38449793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38982110 - 38982146
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaat 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  38982110 atttggtaatattaacacacaaaacagatacattaat 38982146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11071734 - 11071676
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaag 59  Q
    |||| |||||||||||||| |||  ||||||||||||| |||||||||| | |||||||    
T  11071734 atttagtaatattaacacataaattagacacattaattgcactaacaacttttcttaag 11071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 20427002 - 20426960
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||| |||||||||||| ||||||||||||| |||||||||    
T  20427002 gtaataataacacacaaaatagacacattaatttcactaacaa 20426960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 34042096 - 34042142
Alignment:
Q  2 tttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||| |||||| |||||||||||||  ||||||||    
T  34042096 tttggtaatattaacatacaaaatagacacattaattgaactaacaa 34042142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 43709980 - 43709938
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  43709980 gtaatattaacacacaaaatagacgcattaattgcactaacaa 43709938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 23464705 - 23464664
Alignment:
Q  67 aaaaagacaatggatgcctacattaagagacggaggaagtat 108  Q
    ||||||||||||||||| ||||||||| |||||||| |||||    
T  23464705 aaaaagacaatggatgcatacattaagggacggagggagtat 23464664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 6275617 - 6275653
Alignment:
Q  12 ttaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  6275617 ttaacacacaaaatagacacattaattgcactaacaa 6275653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8393274 - 8393234
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  8393274 atttgataatattaacacacaaaacaaacacattaactaca 8393234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15578120 - 15578160
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  15578120 atttgataatattaacacacaaaacaaacacattaactaca 15578160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28190664 - 28190616
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||||||||||||||||| |||| | ||| |||||||| |||||||||    
T  28190664 atttggtaatattaacacaaaaaataaacatattaattatactaacaac 28190616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35453772 - 35453816
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaa 45  Q
    |||| |||||||||||| | |||| ||||||||||||||||||||    
T  35453772 atttagtaatattaacatataaaatagacacattaattacactaa 35453816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36846821 - 36846781
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  36846821 atttgataatattaacacacaaaacaaacacattaactaca 36846781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 42250925 - 42250985
Alignment:
Q  11 attaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||||| ||||||||||||||||||| |||| | || ||||| |||| |||||    
T  42250925 attaaaacacaaaatagacacattaattacactaccaacttttcataagaaatgtgaaaaa 42250985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44462620 - 44462660
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  44462620 atttgataatattaacacacaaaacaaacacattaactaca 44462660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21574918 - 21575026
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||| ||||||||||||| ||||||||||||| ||||||    
T  21574918 atttggtaatattaacatacaaaatagacacattaagtacactaaaaacatttcttaagaaatgtgaaaaagacaatgggtgcctacattaagggacgga 21575017  T
Q  101 ggaagtatt 109  Q
    || ||||||    
T  21575018 gggagtatt 21575026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25017712 - 25017823
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| | || ||||||||||||  || |||||||||| ||||||    
T  25017712 atttggtaatattaacacacaaaacagacacattaattatactgacaacatttcttaagaaacgtgaaaaagacaatgagtgtctacattaagggacgga 25017811  T
Q  101 ggaagtattttt 112  Q
    || |||||||||    
T  25017812 gggagtattttt 25017823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36177358 - 36177250
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||| | ||| | |||||||| |||||||||||||||| ||||||||||||||| || |||    
T  36177358 attttgtaatattaacacacaaaatagacacattaattacactgataacttttcttaagaaatgtaaaaaagacaatagatgcctacattaagggatgga 36177259  T
Q  101 ggaagtatt 109  Q
    || ||||||    
T  36177258 gggagtatt 36177250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34877732 - 34877625
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||| |||| |||||| ||||| ||| |||||||||  ||||||    
T  34877732 atttggtaatattaacacacaaaacagacaaattaattacactgacaacatttcttaagaaatgtgaaaaaggcaatgaatgtctacattaaaggacgga 34877633  T
Q  101 ggaagtat 108  Q
    || |||||    
T  34877632 gggagtat 34877625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5845242 - 5845136
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||| ||||||||| |||||||||| | |||||||||||||| ||||||  |||||||| || | |||||| |||||||||||||||| ||||||||||    
T  5845242 atttgataatattaatacacaaaacaaatacattaattacactgacaacaattcttaagaaatatgaaaaaggcaatggatgcctacatcaagagacgga 5845143  T
Q  101 ggaagta 107  Q
    |||||||    
T  5845142 ggaagta 5845136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27798222 - 27798116
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||| || |||||| | |||| ||||| ||||||||||||| ||||||| ||||||    
T  27798222 atttgataatattaacacacaaaacagacaaattaattacactgacaatatttcttaaaaaatgtgaaaaatacaatggatgcctgcattaagggacgga 27798123  T
Q  101 ggaagta 107  Q
    || ||||    
T  27798122 gggagta 27798116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 10934072 - 10933965
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| || | |||| |||||| ||||  ||||||||||||||  |||||    
T  10934072 atttggtaatattaacatacaaaacagacacattaattacactgacaacatttctgaaaaaatgtgaaaaaggcaataaatgcctacattaaggaacgga 10933973  T
Q  101 ggaagtat 108  Q
    || |||||    
T  10933972 gggagtat 10933965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4738696 - 4738590
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||||| | |||||||||||||| |||| || |||||||| |||| ||||||||||||||||| | ||||||| || |||    
T  4738696 atttagtaatattaacacacaaaacaaatacattaattacactgacaatatttcttaagaaatgtgaaaaagacaatggatgcatgcattaagggatgga 4738597  T
Q  101 ggaagta 107  Q
    || ||||    
T  4738596 gggagta 4738590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 3631163 - 3631257
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggagg 102  Q
    |||||||||||||||||||| |||||||||||||||| | |||  | | |||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  3631163 gtaatattaacacacaaaaccgacacattaattacacga-caattttt-ttaagaaatgtgaaaaagacaatggatgcctacattaagggacggagg 3631257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15967150 - 15967242
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt-aaaaaagacaatggatgcctacattaa 92  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||| | |||||||| |||| ||||||| ||||| ||| |||||||||    
T  15967150 atttggtaatattaatacacaaaacagacacattaattacaccgacaacctttcttaagaaatgtgaaaaaaggcaatgaatgtctacattaa 15967242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15898501 - 15898560
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  15898501 atttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaaga 15898560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10523312 - 10523354
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacact 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10523312 atttggtaatattaacacacaaaacagacacattaattacact 10523354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27587904 - 27587834
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||| | |||||||| |||| |||||    
T  27587904 atttagtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaaatgtgaaaaa 27587834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 7510670 - 7510597
Alignment:
Q  3 ttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| | |||||| | |||| ||||| ||||    
T  7510670 ttggtaatattaacacacaaaacatacacattaattacactaataacttttcttaaaaaatgtgaaaaatacaa 7510597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 43060551 - 43060596
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  43060551 tggtaatattaacacacaaaatagacacattaattacactaacaac 43060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20946153 - 20946065
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacat 89  Q
    ||||| |||||||||||||||||| |||||| |||||| |||||||||| | |||||||| || | |||||  |||||||||| |||||    
T  20946153 atttgataatattaacacacaaaatagacacgttaattgcactaacaacgtttcttaagaaatatgaaaaatgcaatggatgcttacat 20946065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 29866253 - 29866185
Alignment:
Q  3 ttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||| | |||||||| |||| |||||    
T  29866253 ttggtaatattaacacacaaaaaagacatattaattgcactaacaacttttcttaagaaatgtgaaaaa 29866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3247312 - 3247419
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||| |||||||||||| ||||||||||||  |||| | |||||||| |||| |||||| |||||| |  |||| |||||  |||||    
T  3247312 atttcgtaatattaacatacaaaacagacatattaattacactgtcaacttttcttaagaaatgtgaaaaaggcaatgggtatctacgttaaggaacgga 3247411  T
Q  101 ggaagtat 108  Q
    || |||||    
T  3247412 gggagtat 3247419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 11980777 - 11980734
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  11980777 gtaatattaacacacaaaatagacacattaattacactaacaac 11980734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12895247 - 12895302
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctctt 56  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||    
T  12895247 atttggtaatattaatacacaaaacagacacattaattacaccgacaacttctctt 12895302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3559065 - 3559135
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||  | |||||||| |||| |||||    
T  3559065 atttggtaatattaacacacaaaatagacacattaattataccaacaatttttcttaagaaatgtgaaaaa 3559135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27642568 - 27642498
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||| |||||    
T  27642568 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 27642498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32067894 - 32067824
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||| |  | |||||||| ||||||||||    
T  32067894 atttggtaatattaacacacaaaatagacacatgaattgcactaactatttttcttaagaaatgtaaaaaa 32067824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39690524 - 39690594
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||| |||||    
T  39690524 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 39690594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40979250 - 40979344
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagag 95  Q
    |||| |||||||||| |||||||||| |||  ||||||||  | ||||| | | |||||| || | |||||||||||||||||||||||||||||    
T  40979250 atttcgtaatattaatacacaaaacatacatgttaattaccttgacaacttttattaagaaatatgaaaaagacaatggatgcctacattaagag 40979344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 129676 - 129634
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacact 43  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  129676 atttggtaatattaatacacaaaatagacacattaattacact 129634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30348115 - 30348185
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| ||||||||||| || | ||||||| | |||| ||| |||| |||||    
T  30348115 atttggtaatattaacacacaaaatagacacattaagtaaattaacaacttttcttcagaaatgtgaaaaa 30348185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 31642508 - 31642553
Alignment:
Q  2 tttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  31642508 tttggtaatattaacacacaaaa-agacacattaattacactgacaa 31642553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35569043 - 35569113
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||| ||| ||||||||||||||||||||||| | ||| | |||||||| |||| |||||    
T  35569043 atttagtaatattaatacataaaacagacacattaattacactgataacttttcttaagaaatgtgaaaaa 35569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 43454047 - 43453978
Alignment:
Q  2 tttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| ||||||||||| ||||||| ||||||||||||| ||||||||| | | |||||| || |||||||    
T  43454047 tttgataatattaacatacaaaactgacacattaattatactaacaactttttttaagaaatataaaaaa 43453978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9946396 - 9946488
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    |||| |||||||||| ||  ||||||||||||||||||| |   ||||| | | |||| | |||| |||||||||||| ||||||||||||||    
T  9946396 atttcgtaatattaatacgtaaaacagacacattaattatatcgacaacttttattaaaaaatgtgaaaaagacaatgaatgcctacattaag 9946488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 18729648 - 18729584
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||| ||||||||||||||||| || ||  | |||||||| |||| |||||    
T  18729648 taatattaacacacaaaatagacacattaattacacaaataatttttcttaagaaatgtgaaaaa 18729584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 21912180 - 21912116
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||| |||| ||||||||||| |||||||||||| | |||||| | |||| |||||    
T  21912180 taatattaacacataaaatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 21912116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25690735 - 25690791
Alignment:
Q  9 atattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    |||||||||||||||||| |||||||||||||||  ||||| | |||||||| ||||    
T  25690735 atattaacacacaaaacatacacattaattacaccgacaacttttcttaagaaatgt 25690791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29874244 - 29874200
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaa 45  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  29874244 atttggtaatattaacacacaaaatagatacattaactacactaa 29874200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36347639 - 36347687
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||| ||||||||| |||||||||||| |||||||||||||| |||||    
T  36347639 atttgataatattaatacacaaaacagatacattaattacactgacaac 36347687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 600831 - 600784
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||| ||||||||||||||| || ||||||||||||| |||||||||    
T  600831 atttgataatattaacacacataatagacacattaattgcactaacaa 600784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 41521248 - 41521185
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaa 70  Q
    |||||||||||||||||| ||||| ||||||| |||||||||  | |||||| | |||||||||    
T  41521248 taatattaacacacaaaatagacatattaatttcactaacaatttttcttaaaaaatgtaaaaa 41521185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38972165 - 38972234
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||   |||  |||||||||||||||||||||||| | |||||||| |||| |||||    
T  38972165 atttggtaatattaacatttaaat-agacacattaattacactaacaacttttcttaagaaatgtgaaaaa 38972234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4745193 - 4745148
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaac 46  Q
    |||||||||||||||| ||||||| | ||||||||||| |||||||    
T  4745193 atttggtaatattaacccacaaaataaacacattaattgcactaac 4745148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19281529 - 19281569
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    |||| |||||||||| |||||||||||| ||||||||||||    
T  19281529 atttagtaatattaatacacaaaacagatacattaattaca 19281569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32402095 - 32402143
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||||||||||| ||||| ||| |||||||||||||||| ||| |||||    
T  32402095 atttggtaatatcaacacgcaacacagacacattaattaaactgacaac 32402143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 6e-31; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 40645739 - 40645647
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||| |||||| ||||||||||||||||||||    
T  40645739 atttggtaatattaacacacaaaacagacacattaattacacagacaacatttcttaagaaatgtgaaaaaggcaatggatgcctacattaag 40645647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30476106 - 30476000
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| | |||| |||||| |||||| ||||||||||||| ||||||    
T  30476106 atttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaatgggtgcctacattaagggacgga 30476007  T
Q  101 ggaagta 107  Q
    || ||||    
T  30476006 gggagta 30476000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29645423 - 29645316
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt-aaaaaagacaatggatgcctacattaagagacgg 99  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||| | |||| |||||| |||| |||||||||||||||| ||| |    
T  29645423 atttcgtaatattaacacataaaacagatacattaattacactaacaacatttcttaataaatgtgaaaaaaaacaacggatgcctacattaagggacag 29645324  T
Q  100 aggaagta 107  Q
    ||||||||    
T  29645323 aggaagta 29645316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12077784 - 12077897
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||||| | |||||||| || | |||||  |||||| ||||||||||||| ||||||    
T  12077784 attttgtaatattaacacacaaaagagacacattaattacactgacaacttttcttaagaaatttgaaaaatgcaatgggtgcctacattaagggacgga 12077883  T
Q  101 ggaagtatttttaa 114  Q
     ||||||| |||||    
T  12077884 tgaagtatatttaa 12077897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 41727279 - 41727371
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | | |||||| |||| |||||| ||||||||| ||||||||||    
T  41727279 attttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaatggatggctacattaag 41727371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29676780 - 29676887
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||| |||| |||||||||||||||||| ||||  | |||||||| || | |||||| |||||| ||||||||||||| ||||||    
T  29676780 atttcgtaatattaacacataaaatagacacattaattacactgacaatttttcttaagaaatatgaaaaaggcaatgggtgcctacattaagggacgga 29676879  T
Q  101 ggaagtat 108  Q
    || |||||    
T  29676880 gggagtat 29676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 53717578 - 53717653
Alignment:
Q  12 ttaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctac 87  Q
    |||||||||||||||||||||||||||||| | |||| || |||||||| |||||||||||| |||||||||||||    
T  53717578 ttaacacacaaaacagacacattaattacattgacaatatttcttaagaaatgtaaaaaagataatggatgcctac 53717653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46435771 - 46435841
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||    
T  46435771 atttggtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 46435841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 27638124 - 27638225
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagt 106  Q
    |||||||||||||||||| ||| |||||||||||||||| ||| | |||||||| |||| ||||||  |||||||||||| |||||  |||||||| |||    
T  27638124 taatattaacacacaaaatagagacattaattacactaataacttttcttaagaaatgtgaaaaaggtaatggatgcctatattaaaggacggaggcagt 27638223  T
Q  107 at 108  Q
    ||    
T  27638224 at 27638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 41308819 - 41308888
Alignment:
Q  3 ttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaag 72  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||| ||||||    
T  41308819 ttggtaatattaacacacaaaacagacacattaattacactgacaacattttttaagaaatgtgaaaaag 41308888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 50092733 - 50092625
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||| |||||||||  ||||||||||||||||  |||| | | |||||| ||||||||||| |||| ||||| ||||||||| ||||||    
T  50092733 attttgtaatattaatacacaaaaccaacacattaattacactgtcaacttttgttaagaaatgtaaaaaaggcaatagatgcttacattaagggacgga 50092634  T
Q  101 ggaagtatt 109  Q
    || ||||||    
T  50092633 gggagtatt 50092625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14645930 - 14646000
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| | |||| |||||    
T  14645930 atttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaaaaaatgtgaaaaa 14646000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26121397 - 26121327
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||||||||||||||||| |||||||||||||||| ||||| | |||||||| ||||||||||    
T  26121397 atttgataatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtaaaaaa 26121327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26517256 - 26517326
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| |||| |||||    
T  26517256 atttggtaatattaacacagaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 26517326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 42891483 - 42891409
Alignment:
Q  2 tttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||| |||| ||||| ||||    
T  42891483 tttggtaatattaacacacaaaacagacaaattaattatactaacaacttttcttaagaaatgtgaaaaatacaa 42891409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 46048587 - 46048494
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt-aaaaaagacaatggatgcctacattaag 93  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||| | |||||||| |||| ||||||| | |||  |||||||||||||    
T  46048587 atttcgtaatattaatacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaaggcgatgagtgcctacattaag 46048494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 25750590 - 25750522
Alignment:
Q  3 ttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| | |||||||| ||||||||||    
T  25750590 ttggtaatattaacacacaaaatagacaaattaattacattaacaacctttcttaagaaatgtaaaaaa 25750522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13084399 - 13084458
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||    
T  13084399 atttggtaatattaacacacaaaacagacacattaattatactgacaacttttcttaaga 13084458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11388186 - 11388116
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||  | |||||||| |||| |||||    
T  11388186 atttggtaatattaacacgcaaaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 11388116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 20945345 - 20945411
Alignment:
Q  5 ggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| | |||||||| |||| |||||    
T  20945345 ggtaatattaacacataaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 20945411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22659645 - 22659575
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| | | |||||||||| ||||||||| | |||||||| ||||||||||    
T  22659645 atttggtaatattaacacacaaaataaatacattaattatactaacaacttttcttaagaaatgtaaaaaa 22659575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26043084 - 26043014
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||| |||||||||||||||||||| |||||||||||| ||||  | |||||||| ||||||||||    
T  26043084 atttggtaacattaacacacaaaacagacatattaattacactgacaatttttcttaagaaatgtaaaaaa 26043014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29611899 - 29611849
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacat 51  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  29611899 atttgataatattaacacacaaaatagacacattaattacactaacaacat 29611849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31531466 - 31531536
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||    
T  31531466 atttgataatatcaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 31531536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26998960 - 26998869
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaa 92  Q
    |||| |||||||||||| |||||| ||| |||||||||| | | ||||| | |||||||| |||| ||||||| ||||||| ||||||||||    
T  26998960 atttcgtaatattaacaaacaaaatagatacattaattataatgacaacttttcttaagaaatgtgaaaaagataatggatacctacattaa 26998869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33412014 - 33412061
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  33412014 atttggtaatattaacacacaaaatagacacattaattgcactaacaa 33412061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41825178 - 41825237
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||| | ||||||||    
T  41825178 atttggtaatattaacacataaaatagacacattaattacactgacaacttttcttaaga 41825237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42010933 - 42010858
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||  | |||||||| |||| ||||| ||||    
T  42010933 atttgataatattaacacacaaaatagacacattaattacattaacaaattttcttaagaaatgtgaaaaaaacaa 42010858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43187134 - 43187241
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||| ||||||||||||||||||||||||| | ||||| | | |||||| || | |||||| |||||  || |||||||||  ||||||    
T  43187134 atttcgtaatattaatacacaaaacagacacattaattacattgacaactttttttaagaaatatgaaaaaggcaatgagtgactacattaacggacgga 43187233  T
Q  101 ggaagtat 108  Q
    || |||||    
T  43187234 gggagtat 43187241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11344623 - 11344553
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||| | |||||||| |||| |||||    
T  11344623 atttggtaatgttaacacacaaaatagacacattaattacaccaataacttttcttaagaaatgtgaaaaa 11344553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27047219 - 27047265
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaaca 47  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  27047219 atttggtaatattaacacacaaaatagacacattaattgcactaaca 27047265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28477450 - 28477413
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaatt 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28477450 atttggtaatattaacacacaaaacagacacattaatt 28477413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11393987 - 11393939
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||    
T  11393987 atttgatagtattaacacacaaaatagacacattaattacactaacaac 11393939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35765687 - 35765751
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    ||||||||||||||| |||||||||||||| |||||||||||| | ||| | |||||||| ||||    
T  35765687 atttggtaatattaatacacaaaacagacatattaattacactgataacttttcttaagaaatgt 35765751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39617291 - 39617339
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  39617291 atttcgtaatattaacatacaaaacagacacattaattacactgacaac 39617339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44083692 - 44083645
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  44083692 atttggtaatattaacacacaaaatagatacattaattacaataacaa 44083645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51263147 - 51263100
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  51263147 atttagtaatactaacacataaaacagacacattaattacactaacaa 51263100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 5504604 - 5504690
Alignment:
Q  22 aaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagtat 108  Q
    ||||||| |||||||||||||| ||||||| |||||||| |||| |||| |  || || ||||||||||||| ||| |||| |||||    
T  5504604 aaacagatacattaattacactgacaacatttcttaagaaatgtgaaaagggaaacgggtgcctacattaagggaccgagggagtat 5504690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31819471 - 31819401
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| ||||||||||||||||||||||  | ||| | |||||||| |||| |||||    
T  31819471 atttcgtaatattaacacataaaacagacacattaattacaccgataacttttcttaagaaatgtgaaaaa 31819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52325544 - 52325590
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaaca 47  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  52325544 atttgataatattaacacataaaatagacacattaattacactaaca 52325590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41740014 - 41740051
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaatt 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  41740014 atttggtaatattaacacacaaaatagacacattaatt 41740051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21932991 - 21932955
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaat 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21932991 atttggtaatattaacacacaaaatagacacattaat 21932955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 23157152 - 23157096
Alignment:
Q  9 atattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    |||||||| |||||||||||||||||||||||||| ||||  | |||||||| ||||    
T  23157152 atattaactcacaaaacagacacattaattacactgacaatttttcttaagaaatgt 23157096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 33287925 - 33287861
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||| ||||| |||||||||||||  ||| | |||||||| |||| |||||    
T  33287925 taatattaacacacaaaatagacaaattaattacactacaaacttttcttaagaaatgtgaaaaa 33287861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 37729076 - 37729140
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||| |||||||||||||| | ||||||  | |||||||| |||| |||||    
T  37729076 taatattaacacacaaaatagacacattaattatattaacaatttttcttaagaaatgtgaaaaa 37729140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 54425997 - 54426029
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacat 33  Q
    |||||||||||||||||||||||||||||||||    
T  54425997 atttggtaatattaacacacaaaacagacacat 54426029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 35055851 - 35055816
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaa 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  35055851 atttggtaatattaacacacaaaatagacacattaa 35055816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 50363092 - 50363045
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||||||||||||| ||| |||||||||| |||||||||||| ||||    
T  50363092 atttggtaatattaatacataaaacagacatattaattacactgacaa 50363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11140770 - 11140728
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacact 43  Q
    ||||||||||| |||||||||||||| |||||||| |||||||    
T  11140770 atttggtaatactaacacacaaaacatacacattatttacact 11140728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 31996867 - 31996790
Alignment:
Q  106 tatttttaaacttctatatatctttatctctccaaaataaaagaaatagagagactgataaatggagagaatcttgact 184  Q
    |||||| |||||||| | ||  |||||||||||||| || ||||||| |||| ||| ||||||||||| ||||||||||    
T  31996867 tattttcaaacttctttgtacttttatctctccaaa-tagaagaaatggagacactaataaatggagaaaatcttgact 31996790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 34055909 - 34055943
Alignment:
Q  7 taatattaacacacaaaacagacacattaattaca 41  Q
    |||||||||||||||||||||||| ||||||||||    
T  34055909 taatattaacacacaaaacagacatattaattaca 34055943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 26243527 - 26243462
Alignment:
Q  11 attaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaa 76  Q
    |||||||||||||||| ||| |||||||||||| ||||| | | |||| | |||||||||| ||||    
T  26243527 attaacacacaaaacaaacatattaattacactgacaaccttttttaaaaaatgtaaaaaatacaa 26243462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48901558 - 48901603
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaac 46  Q
    |||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  48901558 atttagtaatattaacacacaaaatagacaaattaattgcactaac 48901603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48903124 - 48903169
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaac 46  Q
    |||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  48903124 atttagtaatattaacacacaaaatagacaaattaattgcactaac 48903169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16582598 - 16582506
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaag 93  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||| |||||||||||||||| ||||||||||    
T  16582598 atttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatggatggctacattaag 16582506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5085127 - 5085233
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| | |||| |||||| |||||| ||||||||||||| ||||||    
T  5085127 atttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaatgggtgcctacattaagggacgga 5085226  T
Q  101 ggaagta 107  Q
    || ||||    
T  5085227 gggagta 5085233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33231905 - 33231799
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| | | |||||| |||| |||||| ||||||||| |||||||||| ||||||    
T  33231905 atttcgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaatggatggctacattaagggacgga 33231806  T
Q  101 ggaagta 107  Q
    || ||||    
T  33231805 gggagta 33231799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34696921 - 34697027
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||||||||| |||||||||||| ||||| | |||||| | |||| ||||||||| ||||| ||||||||||| ||||||    
T  34696921 atttcgtaatattaacacacaaaacagacatattaattacactgacaacttttcttaaaaaatgtgaaaaagacagtggatccctacattaagggacgga 34697020  T
Q  101 ggaagta 107  Q
    || ||||    
T  34697021 gggagta 34697027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 48721906 - 48722008
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt-aaaaaagacaatggatgcctacattaagagacgg 99  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| | | |||||||| |||| ||||||| |||||| ||||||||||||| |||||    
T  48721906 atttcgtaatattaacacacaaaacagacacattaattacactgacagcttttcttaagaaatgtgaaaaaaggcaatgggtgcctacattaagggacgg 48722005  T
Q  100 agg 102  Q
    |||    
T  48722006 agg 48722008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32047507 - 32047406
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||| | |||||||| |||| |||||  |||||| ||||||||||||| ||||||    
T  32047507 atttcgtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaatgggtgcctacattaagggacgga 32047408  T
Q  101 gg 102  Q
    ||    
T  32047407 gg 32047406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 9675705 - 9675804
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||| |||||| |||||||||||| ||||| | |||||||| | ||||||||| |||||| ||||||||||||| ||||||    
T  9675705 atttcgtaatattaacacacaaatcagacaaattaattacactgacaacttttcttaagaaacgtaaaaaagtcaatgggtgcctacattaagggacgga 9675804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25269442 - 25269343
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||| ||||||||||||||| ||||||| ||||| | |||||| | |||| |||||||||||||||| | |||||||||||||||    
T  25269442 atttcgtaatattaacacataaaacagacacattatttacactgacaacttttcttaaaaaatgtgaaaaagacaatggatggcaacattaagagacgga 25269343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3143468 - 3143355
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||| | |||||||| |||| |||||  |||||| ||||||||||||| ||| ||    
T  3143468 attttgtaatattaacacacaaagcagacacattaattacaatgacaacttttcttaagaaatgtgaaaaaagcaatgggtgcctacattaagggacaga 3143369  T
Q  101 ggaagtatttttaa 114  Q
    || ||||| |||||    
T  3143368 gggagtatctttaa 3143355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 29302494 - 29302595
Alignment:
Q  8 aatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagta 107  Q
    |||||||||| |||||||| | ||||| |||||||| ||||| | |||||||| |||| ||||||  ||||||||||||||||||| | |||||||||||    
T  29302494 aatattaacatacaaaacaaatacattgattacactgacaacttttcttaagaaatgtgaaaaagggaatggatgcctacattaagcgtcggaggaagta 29302593  T
Q  108 tt 109  Q
    ||    
T  29302594 tt 29302595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 28334265 - 28334340
Alignment:
Q  13 taacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctaca 88  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||| |||| ||||||||||||| || |||||    
T  28334265 taacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatgggtgactaca 28334340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29140692 - 29140799
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||   |||| | |||||||| |||| |||||| |||| |||| |||||||||  ||||||    
T  29140692 attttgtaatattaatacacaaaacagacacattaattacaccggcaacttttcttaagaaatgtgaaaaaggcaatagatgactacattaaaggacgga 29140791  T
Q  101 ggaagtat 108  Q
    || |||||    
T  29140792 gggagtat 29140799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5322061 - 5322167
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||| |||||||||||||||||||||||||||| | | ||| | |||||| | || | |||||| |||| ||||||||||||||| ||||||    
T  5322061 atttcgtaatataaacacacaaaacagacacattaattacattgataacttttcttaaaaaatatgaaaaaggcaatagatgcctacattaagggacgga 5322160  T
Q  101 ggaagta 107  Q
    || ||||    
T  5322161 gggagta 5322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38680540 - 38680470
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||| |||| |||||    
T  38680540 atttgataatattaacacacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 38680470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44335354 - 44335284
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| | | |||||| |||| |||||    
T  44335354 atttggtaatattaacacacaaaacagacacattaattacactgacaacttttattaagaaatgtgaaaaa 44335284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 44652902 - 44653003
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggagga 103  Q
    |||||||||||| |||||||||||||||||||||||||||   ||||| |||||||| |||| |||| | ||||| ||| |||||||||  ||||||||     
T  44652902 tggtaatattaaaacacaaaacagacacattaattacact---aacatttcttaagaaatgtgaaaatggcaatgaatggctacattaaaggacggaggg 44652998  T
Q  104 agtat 108  Q
    |||||    
T  44652999 agtat 44653003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13723516 - 13723617
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||||| | |||||||| |||| |||||  ||| || ||| ||||| |||||| |||    
T  13723516 atttggtaatattaatacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaatgcaaagggtgcttacataaagagatgga 13723615  T
Q  101 gg 102  Q
    ||    
T  13723616 gg 13723617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28723691 - 28723748
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  28723691 atttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaa 28723748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15911590 - 15911654
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||| ||||    
T  15911590 atttggtaatattaacacacaaaatagacacattaagtacactaacaacttttcttaagaaatgt 15911654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31808010 - 31808058
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31808010 atttggtaatattaacacacaaaatagacacattaattacactaacaac 31808058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 36085029 - 36084929
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagt 106  Q
    |||||||||||||||||||||| |||||||||||||| | ||  | |||||| | |||| ||||||||||||  ||||||||||||| |||| | |||||    
T  36085029 taatattaacacacaaaacagatacattaattacactgataatttttcttaaaaaatgtgaaaaagacaatgattgcctacattaagggacgaaagaagt 36084930  T
Q  107 a 107  Q
    |    
T  36084929 a 36084929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8984699 - 8984746
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  8984699 atttagtaatattaacacacaaaacagacacattaattacactaacaa 8984746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 35001318 - 35001417
Alignment:
Q  11 attaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagtattt 110  Q
    ||||||||||||||||||||  || |||||||| ||||| | |||||| | |||| ||||||||||||| |||||| |||||| |||||| | |||||||    
T  35001318 attaacacacaaaacagacattttgattacactgacaacttttcttaataaatgtgaaaaagacaatgggtgcctagattaagggacggaaggagtattt 35001417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4813500 - 4813570
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||| | |||||||| |||| |||||    
T  4813500 atttggtaatattaacacacaaaatagacacattaattgcattaacaacttttcttaagaaatgtgaaaaa 4813570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23982630 - 23982700
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||| | |||||||| |||| |||||    
T  23982630 atttgataatattaacacacaaaacagacacattaattacattgacaacttttcttaagaaatgtgaaaaa 23982700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30336124 - 30336054
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| | |||||||| |||| |||||    
T  30336124 atttggtaatattaacacacaaaatagacacattaattacaccgacaacttttcttaagaaatgtgaaaaa 30336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30898601 - 30898671
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||  | |||||||| |||| |||||    
T  30898601 atttggtaatattaacacataaaacagacacattaattacactgacaatttttcttaagaaatgtgaaaaa 30898671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32152223 - 32152153
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||| | |||||||| |||| |||||    
T  32152223 atttggtaatattaacacacaaaatagacacattaattgcaccaacaacttttcttaagaaatgtgaaaaa 32152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41737190 - 41737131
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||| | ||||||||    
T  41737190 atttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaaga 41737131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44395600 - 44395517
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcc 84  Q
    |||| |||||||||||||| |||| | ||| |||||||||||| ||||||| |||||||| |||| |||| |||||||| ||||    
T  44395600 attttgtaatattaacacataaaataaacatattaattacactgacaacatttcttaagaaatgtgaaaaggacaatgggtgcc 44395517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 46495374 - 46495327
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  46495374 atttgataatattaacacacaaaacagacacattaattacactgacaa 46495327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15512819 - 15512889
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||| |||||    
T  15512819 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 15512889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28949002 - 28949072
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||| |||||    
T  28949002 atttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaa 28949072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32144376 - 32144306
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||| ||||||| ||||||||||| | ||| |||||| | |||||||| ||||||||||    
T  32144376 atttggtaatattaacgcacaaaatagacacattaaatgcaccaacaacttttcttaagaaatgtaaaaaa 32144306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 46591161 - 46591099
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaa 69  Q
    |||||||||||||||||||| |||||||||||||||| ||||| | |||||| | ||||||||    
T  46591161 taatattaacacacaaaacaaacacattaattacactcacaacttttcttaaaatatgtaaaa 46591099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47754680 - 47754750
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||  | | |||||| ||||||||||    
T  47754680 atttggtaatattaacacaaaaaatagacacattaattgcactaacaattttttttaagaaatgtaaaaaa 47754750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 27531159 - 27531094
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||| | |||||||| |||| |||||    
T  27531159 gtaatattaacacacaaaacaaacacattaattatactgacaacttttcttaagaaatgtgaaaaa 27531094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47070999 - 47071044
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaac 46  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||    
T  47070999 atttggtaatattaacacataaaatagacacattaattacactaac 47071044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13352899 - 13352835
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgt 65  Q
    ||||| ||||||||||||| ||||||||||||||||||  |||||| |||| |||||||| ||||    
T  13352899 atttgctaatattaacacataaaacagacacattaattgaactaactacatttcttaagaaatgt 13352835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34102401 - 34102361
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  34102401 atttgataatattaacacacaaaacagacacattaattaca 34102361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2342969 - 2342922
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||    
T  2342969 atttggtaatattaacacacaaaatagacacattaagtaaactaacaa 2342922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24415065 - 24414994
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaag 72  Q
    |||||||||||||||||||||||| ||| |||||||||||||  |||| ||  ||||| | |||||||||||    
T  24415065 atttggtaatattaacacacaaaagagatacattaattacaccgacaatattacttaataaatgtaaaaaag 24414994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51997020 - 51996961
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||| | ||||||||    
T  51997020 atttggtaatattaacacagaaaacatacaaattaattacactgacaacttttcttaaga 51996961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 10160760 - 10160678
Alignment:
Q  25 cagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggaggaagta 107  Q
    ||||||||||||||||||| | ||| | |||||||| |||| |||||| ||| ||||||||| |||||| || ||||| ||||    
T  10160760 cagacacattaattacactgataacttttcttaagaaatgtgaaaaaggcaacggatgcctatattaagggatggagggagta 10160678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31305383 - 31305313
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||| || |||||| ||||||||||||||||| |||||| | |||||| | |||| |||||    
T  31305383 atttggtaatattagcatacaaaatagacacattaattacaccaacaacttttcttaataaatgtgaaaaa 31305313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16395586 - 16395627
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacac 42  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  16395586 atttggtaatattaacatacaaaatagacacattaattacac 16395627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50692474 - 50692405
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaa 70  Q
    ||||||||||| |||||||||||| ||||||||||||| || | ||||| | |||||||| |||| ||||    
T  50692474 atttggtaatactaacacacaaaatagacacattaattgcattgacaacttttcttaagaaatgtgaaaa 50692405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8877837 - 8877737
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacgga 100  Q
    |||| ||||||||||||||||||||| |||||||||||| ||| ||||  | |||||| | || | |||||| |||||  || |||||||||  ||||||    
T  8877837 atttcgtaatattaacacacaaaacaaacacattaattatactgacaatttttcttaaaaaatatgaaaaaggcaatgagtgtctacattaaaggacgga 8877738  T
Q  101 g 101  Q
    |    
T  8877737 g 8877737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9684756 - 9684796
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattaca 41  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  9684756 attttgtaatattaacgcacaaaacagacacattaattaca 9684796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35366022 - 35366070
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||| |||||||||||||||||| ||| |||||| |||||||||||||    
T  35366022 atttgataatattaacacacaaaatagatacattacttacactaacaac 35366070  T

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Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 44163291 - 44163255
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacact 43  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44163291 taatattaacacacaaaacaaacacattaattacact 44163255  T

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Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47643605 - 47643536
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaag 72  Q
    |||| ||||||||||||||  ||||| |||||||||||||||| ||||| | |||||||| |||| ||||||    
T  47643605 atttagtaatattaacaca--aaacatacacattaattacactgacaacttttcttaagaaatgtgaaaaag 47643536  T

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Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 13698648 - 13698594
Alignment:
Q  6 gtaatattaacacacaaaacagacacattaattacactaacaacatctcttaaga 60  Q
    ||||||||||||| ||||| | ||| |||||||||||||||||| | ||||||||    
T  13698648 gtaatattaacacgcaaaataaacatattaattacactaacaacttttcttaaga 13698594  T

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Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 25063271 - 25063241
Alignment:
Q  5 ggtaatattaacacacaaaacagacacatta 35  Q
    |||||||||||||||||||||||||||||||    
T  25063271 ggtaatattaacacacaaaacagacacatta 25063241  T

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Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 28679865 - 28679907
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaac 49  Q
    |||||||||||||||||| ||||||||||||| || |||||||    
T  28679865 taatattaacacacaaaatagacacattaattgcattaacaac 28679907  T

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Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 34012116 - 34012074
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaac 49  Q
    ||||||||||||| |||||||||||||||||| |||| |||||    
T  34012116 taatattaacacataaaacagacacattaattgcactgacaac 34012074  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25258395 - 25258338
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    |||||||||||| || ||| |||| ||||||||||||| |||||||||| | ||||||    
T  25258395 atttggtaatatcaagacataaaatagacacattaattgcactaacaacttttcttaa 25258338  T

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Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40261660 - 40261615
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaac 46  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||    
T  40261660 atttgataatattaacacacaaaataaacacattaattgcactaac 40261615  T

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Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 47133483 - 47133524
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaa 48  Q
    |||||||||||||||||| | |||||||||||||| ||||||    
T  47133483 taatattaacacacaaaataaacacattaattacattaacaa 47133524  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 12706004 - 12706036
Alignment:
Q  9 atattaacacacaaaacagacacattaattaca 41  Q
    ||||||| |||||||||||||||||||||||||    
T  12706004 atattaatacacaaaacagacacattaattaca 12706036  T

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Target: scaffold1091 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1952 - 2022
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||| |||| |||||    
T  1952 atttggtaatattaacacacaaaatagacacattaattacactaacaacttatcttaagaaatgtgaaaaa 2022  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 214684 - 214614
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||| | |||||||| |||| |||||    
T  214684 atttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 214614  T

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Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 38519 - 38563
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaa 48  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  38519 tggtaatattaacacacaaaatagacacattaattatactaacaa 38563  T

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Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 22123 - 22025
Alignment:
Q  4 tggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaagacaatggatgcctacattaagagacggagga 103  Q
    |||||||||||| |||||||||| |||||||||||||||| | ||||| ||     | |||| |||||||||||   ||||||||||||| ||||||||     
T  22123 tggtaatattaatacacaaaacaaacacattaattacactgataacatttc-----aaatgtgaaaaagacaatatgtgcctacattaagggacggaggg 22029  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 49196 - 49132
Alignment:
Q  7 taatattaacacacaaaacagacacattaattacactaacaacatctcttaagagatgtaaaaaa 71  Q
    |||||||||||||||||  ||||| |||||||||| ||||||  | |||||||| ||||||||||    
T  49196 taatattaacacacaaagtagacatattaattacattaacaatttttcttaagaaatgtaaaaaa 49132  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 99856 - 99913
Alignment:
Q  1 atttggtaatattaacacacaaaacagacacattaattacactaacaacatctcttaa 58  Q
    |||| ||||||||||||||||||| |||||||| | || |||||||||| | ||||||    
T  99856 atttcgtaatattaacacacaaaatagacacataagttgcactaacaacttttcttaa 99913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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