View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14473_high_77 (Length: 216)
Name: NF14473_high_77
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14473_high_77 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 20 - 200
Target Start/End: Complemental strand, 738578 - 738398
Alignment:
| Q |
20 |
atctccatcagcattggcatctccagtcccagttgccagtacacaggcaccttctccgaacaatgcttcaccattgattgttgcaaagggagcttttggt |
119 |
Q |
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| T |
738578 |
atctccatcagcattggcatctccagtcccagttgccagtacacaggcaccttctccgaacaatgcttcaccattgattgttgcaaagggagcttttggt |
738479 |
T |
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| Q |
120 |
attattggtttggccatgacagttttagtgttttctatttctacttaagcataataaaaagttgtccttgtttgttgttag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
738478 |
attattggtttggccatgacagttttagtgttttctatttctacttaagcataataaaaagttgtccttgtttgttgttag |
738398 |
T |
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