View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14473_low_13 (Length: 474)

Name: NF14473_low_13
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14473_low_13
NF14473_low_13
[»] chr4 (35 HSPs)
chr4 (1-437)||(28790875-28791312)
chr4 (292-436)||(33696279-33696425)
chr4 (239-437)||(54127341-54127540)
chr4 (239-437)||(40058851-40059050)
chr4 (292-437)||(27528794-27528941)
chr4 (299-436)||(34723857-34723996)
chr4 (292-437)||(34844757-34844904)
chr4 (292-435)||(52983670-52983815)
chr4 (292-434)||(20077986-20078130)
chr4 (239-437)||(32986196-32986395)
chr4 (286-368)||(38740895-38740977)
chr4 (292-436)||(49287909-49288054)
chr4 (376-436)||(7093508-7093568)
chr4 (292-386)||(33992677-33992773)
chr4 (239-333)||(34835528-34835621)
chr4 (299-382)||(18875571-18875655)
chr4 (299-436)||(20566408-20566547)
chr4 (310-437)||(55961753-55961881)
chr4 (313-373)||(25969566-25969625)
chr4 (239-365)||(25852213-25852338)
chr4 (267-361)||(12710206-12710299)
chr4 (299-437)||(45787703-45787843)
chr4 (292-361)||(22630263-22630332)
chr4 (293-369)||(10125872-10125948)
chr4 (299-387)||(21387534-21387624)
chr4 (291-437)||(7391964-7392110)
chr4 (326-373)||(42281169-42281216)
chr4 (302-368)||(16339691-16339757)
chr4 (320-436)||(35229246-35229365)
chr4 (299-361)||(39288917-39288978)
chr4 (292-429)||(9517648-9517787)
chr4 (294-387)||(32990488-32990583)
chr4 (310-369)||(13771551-13771611)
chr4 (241-297)||(31334545-31334600)
chr4 (301-437)||(44343574-44343712)
[»] chr7 (36 HSPs)
chr7 (238-436)||(28646971-28647170)
chr7 (239-437)||(21574101-21574301)
chr7 (291-437)||(654704-654851)
chr7 (239-383)||(8435750-8435893)
chr7 (275-437)||(23330738-23330901)
chr7 (286-436)||(11909954-11910106)
chr7 (239-437)||(2751274-2751473)
chr7 (299-437)||(21835213-21835353)
chr7 (239-437)||(22119891-22120090)
chr7 (239-437)||(40542909-40543108)
chr7 (233-436)||(22696317-22696522)
chr7 (292-437)||(22703541-22703688)
chr7 (292-437)||(29861725-29861872)
chr7 (267-437)||(11997880-11998051)
chr7 (239-436)||(7275280-7275478)
chr7 (292-436)||(17196950-17197096)
chr7 (239-437)||(7175861-7176060)
chr7 (310-437)||(28089889-28090021)
chr7 (239-437)||(21217832-21218031)
chr7 (316-427)||(1766153-1766265)
chr7 (239-387)||(10091191-10091340)
chr7 (292-387)||(23012557-23012654)
chr7 (267-365)||(42814895-42814992)
chr7 (239-437)||(2344302-2344501)
chr7 (239-344)||(12211629-12211733)
chr7 (234-386)||(13332475-13332626)
chr7 (292-437)||(16374049-16374196)
chr7 (299-436)||(18044169-18044308)
chr7 (239-387)||(2103058-2103207)
chr7 (272-344)||(25956258-25956329)
chr7 (350-437)||(31274027-31274115)
chr7 (310-437)||(23092169-23092298)
chr7 (320-390)||(21373793-21373865)
chr7 (272-333)||(40332135-40332195)
chr7 (267-387)||(19421262-19421383)
chr7 (294-373)||(39145716-39145796)
[»] chr5 (27 HSPs)
chr5 (239-436)||(19145412-19145609)
chr5 (239-437)||(32059439-32059638)
chr5 (299-436)||(6014280-6014419)
chr5 (292-437)||(27498730-27498877)
chr5 (310-437)||(19456210-19456338)
chr5 (267-436)||(36895452-36895622)
chr5 (239-436)||(11926501-11926700)
chr5 (292-437)||(38684259-38684405)
chr5 (239-437)||(8484660-8484859)
chr5 (292-437)||(30485879-30486026)
chr5 (292-436)||(34310193-34310339)
chr5 (292-390)||(15971168-15971268)
chr5 (292-429)||(42193536-42193673)
chr5 (300-437)||(7085625-7085764)
chr5 (292-437)||(15641105-15641251)
chr5 (292-437)||(18207258-18207405)
chr5 (309-437)||(35425081-35425211)
chr5 (292-437)||(33709502-33709647)
chr5 (239-437)||(4603776-4603975)
chr5 (291-437)||(12398447-12398595)
chr5 (293-436)||(24158166-24158311)
chr5 (239-386)||(25586931-25587080)
chr5 (404-436)||(930486-930518)
chr5 (350-437)||(41351103-41351191)
chr5 (370-436)||(23290727-23290793)
chr5 (287-324)||(30700603-30700640)
chr5 (292-367)||(37495098-37495173)
[»] chr2 (37 HSPs)
chr2 (239-437)||(8192351-8192549)
chr2 (239-437)||(44946052-44946251)
chr2 (234-436)||(17324760-17324961)
chr2 (272-365)||(4618758-4618850)
chr2 (239-436)||(11941210-11941408)
chr2 (299-387)||(24196062-24196150)
chr2 (267-344)||(28194227-28194303)
chr2 (239-436)||(30466830-30467028)
chr2 (292-437)||(43374329-43374471)
chr2 (291-437)||(5394067-5394215)
chr2 (239-437)||(15037958-15038157)
chr2 (267-436)||(19605846-19606015)
chr2 (292-369)||(41314043-41314120)
chr2 (292-437)||(33827572-33827719)
chr2 (292-437)||(35171851-35171998)
chr2 (292-437)||(2140485-2140629)
chr2 (310-436)||(29698216-29698343)
chr2 (292-387)||(36242361-36242458)
chr2 (239-390)||(38784227-38784377)
chr2 (292-384)||(10582043-10582136)
chr2 (311-365)||(35797532-35797586)
chr2 (294-387)||(4567486-4567581)
chr2 (314-367)||(9641095-9641148)
chr2 (350-436)||(41329951-41330039)
chr2 (292-387)||(44976202-44976300)
chr2 (291-387)||(36390617-36390715)
chr2 (314-437)||(28668946-28669071)
chr2 (354-437)||(8259010-8259095)
chr2 (375-437)||(14486961-14487023)
chr2 (286-379)||(14946824-14946918)
chr2 (239-333)||(25293165-25293258)
chr2 (292-373)||(27290639-27290720)
chr2 (321-437)||(34516413-34516530)
chr2 (404-437)||(28194137-28194170)
chr2 (350-436)||(31778140-31778228)
chr2 (285-345)||(19525489-19525549)
chr2 (272-344)||(40591215-40591286)
[»] chr3 (43 HSPs)
chr3 (239-437)||(40133448-40133647)
chr3 (239-437)||(48977387-48977586)
chr3 (239-437)||(25289714-25289912)
chr3 (313-437)||(1178244-1178368)
chr3 (239-436)||(21362942-21363140)
chr3 (292-436)||(49258262-49258408)
chr3 (239-413)||(50582991-50583165)
chr3 (239-436)||(31537838-31538036)
chr3 (292-437)||(15566499-15566645)
chr3 (239-436)||(52821636-52821833)
chr3 (292-437)||(8456149-8456296)
chr3 (350-436)||(32151533-32151621)
chr3 (239-436)||(35492910-35493108)
chr3 (239-437)||(30807152-30807351)
chr3 (350-435)||(48104986-48105073)
chr3 (239-437)||(53424176-53424374)
chr3 (310-437)||(10083818-10083947)
chr3 (239-437)||(46576347-46576546)
chr3 (299-436)||(18176887-18177026)
chr3 (292-437)||(26174164-26174311)
chr3 (310-387)||(1242042-1242121)
chr3 (239-427)||(4252405-4252594)
chr3 (310-437)||(10190741-10190870)
chr3 (292-383)||(26108343-26108436)
chr3 (239-382)||(40940824-40940968)
chr3 (239-437)||(45529754-45529952)
chr3 (351-437)||(8097278-8097366)
chr3 (275-344)||(31766726-31766794)
chr3 (350-436)||(33398468-33398556)
chr3 (311-436)||(39041852-39041979)
chr3 (272-332)||(53863845-53863904)
chr3 (291-365)||(8958109-8958183)
chr3 (238-357)||(33417904-33418021)
chr3 (310-437)||(45272415-45272544)
chr3 (294-437)||(53233910-53234054)
chr3 (291-424)||(53288725-53288859)
chr3 (239-437)||(30257623-30257822)
chr3 (316-387)||(1692909-1692981)
chr3 (311-436)||(24407331-24407458)
chr3 (239-436)||(34492575-34492773)
chr3 (272-373)||(34844410-34844510)
chr3 (239-427)||(25379760-25379949)
chr3 (272-344)||(26158850-26158921)
[»] chr8 (47 HSPs)
chr8 (238-437)||(24018384-24018585)
chr8 (292-437)||(4718700-4718847)
chr8 (239-435)||(15259407-15259604)
chr8 (291-436)||(18128567-18128714)
chr8 (299-436)||(264400-264538)
chr8 (299-436)||(651383-651521)
chr8 (299-436)||(837118-837256)
chr8 (239-437)||(34694574-34694774)
chr8 (239-437)||(3734622-3734821)
chr8 (291-437)||(20305962-20306110)
chr8 (291-437)||(21092595-21092743)
chr8 (233-435)||(28193471-28193674)
chr8 (239-437)||(34237654-34237853)
chr8 (291-389)||(3403549-3403649)
chr8 (313-386)||(21239425-21239498)
chr8 (239-369)||(28908824-28908955)
chr8 (242-373)||(41070767-41070897)
chr8 (239-436)||(34639208-34639404)
chr8 (239-382)||(27746390-27746533)
chr8 (292-437)||(39349311-39349458)
chr8 (292-436)||(21603285-21603431)
chr8 (285-434)||(24339625-24339776)
chr8 (310-437)||(42328077-42328206)
chr8 (239-437)||(2618189-2618388)
chr8 (299-437)||(8765525-8765665)
chr8 (239-437)||(32879282-32879481)
chr8 (292-437)||(14633009-14633156)
chr8 (239-437)||(19471612-19471812)
chr8 (239-437)||(19542536-19542736)
chr8 (239-437)||(19589960-19590160)
chr8 (349-437)||(2639410-2639500)
chr8 (285-436)||(6953008-6953160)
chr8 (239-390)||(18532110-18532262)
chr8 (311-382)||(30482612-30482683)
chr8 (294-437)||(34610686-34610831)
chr8 (275-373)||(1372466-1372563)
chr8 (292-368)||(4698793-4698869)
chr8 (350-436)||(10292167-10292255)
chr8 (260-436)||(12312870-12313046)
chr8 (291-356)||(33121043-33121107)
chr8 (299-437)||(33746944-33747084)
chr8 (239-436)||(42643118-42643316)
chr8 (311-361)||(11956133-11956183)
chr8 (267-333)||(23361625-23361691)
chr8 (272-361)||(13749091-13749179)
chr8 (239-384)||(28964036-28964182)
chr8 (286-346)||(36094733-36094793)
[»] chr6 (25 HSPs)
chr6 (239-437)||(9843937-9844136)
chr6 (267-387)||(33499501-33499623)
chr6 (291-434)||(10377765-10377911)
chr6 (239-437)||(15360097-15360296)
chr6 (292-436)||(9690638-9690784)
chr6 (292-437)||(3222635-3222781)
chr6 (239-338)||(8479311-8479409)
chr6 (239-387)||(9208251-9208400)
chr6 (294-437)||(34147399-34147544)
chr6 (294-437)||(34160015-34160160)
chr6 (267-434)||(17149458-17149626)
chr6 (239-436)||(654146-654344)
chr6 (239-436)||(28672066-28672264)
chr6 (292-436)||(11448922-11449068)
chr6 (292-437)||(1344986-1345133)
chr6 (267-427)||(28741850-28742011)
chr6 (292-436)||(11840952-11841097)
chr6 (292-436)||(5360071-5360217)
chr6 (292-387)||(12390476-12390573)
chr6 (239-387)||(11007164-11007313)
chr6 (319-436)||(14504082-14504201)
chr6 (239-369)||(12591636-12591765)
chr6 (310-437)||(17081053-17081182)
chr6 (311-436)||(17225737-17225863)
chr6 (292-437)||(21148510-21148656)
[»] chr1 (36 HSPs)
chr1 (239-437)||(46607809-46608008)
chr1 (292-437)||(15059401-15059548)
chr1 (292-436)||(9500355-9500501)
chr1 (239-437)||(4621236-4621435)
chr1 (292-437)||(8254751-8254898)
chr1 (239-436)||(24674392-24674590)
chr1 (239-437)||(32729544-32729742)
chr1 (292-436)||(24122074-24122220)
chr1 (352-435)||(37351454-37351538)
chr1 (301-390)||(1378958-1379048)
chr1 (239-436)||(7197247-7197444)
chr1 (299-423)||(16899561-16899687)
chr1 (286-365)||(34965374-34965453)
chr1 (292-437)||(7766726-7766873)
chr1 (286-362)||(809267-809343)
chr1 (239-355)||(24216977-24217092)
chr1 (292-427)||(18646904-18647041)
chr1 (291-437)||(30677226-30677374)
chr1 (292-435)||(17935820-17935965)
chr1 (299-357)||(19034467-19034525)
chr1 (267-357)||(25237070-25237159)
chr1 (272-357)||(1138611-1138695)
chr1 (286-436)||(1486463-1486617)
chr1 (292-437)||(7578460-7578607)
chr1 (292-390)||(7946895-7946994)
chr1 (239-387)||(8077646-8077795)
chr1 (312-436)||(9926146-9926272)
chr1 (350-436)||(26513148-26513235)
chr1 (239-373)||(27454931-27455064)
chr1 (291-361)||(16539658-16539728)
chr1 (239-369)||(29057407-29057535)
chr1 (285-436)||(31162794-31162947)
chr1 (370-436)||(35138119-35138185)
chr1 (272-333)||(39964544-39964604)
chr1 (239-347)||(46113492-46113600)
chr1 (239-335)||(52135129-52135224)
[»] scaffold0576 (1 HSPs)
scaffold0576 (239-437)||(5081-5280)
[»] scaffold0070 (1 HSPs)
scaffold0070 (239-437)||(40324-40522)
[»] scaffold0026 (1 HSPs)
scaffold0026 (291-436)||(97366-97513)
[»] scaffold0049 (1 HSPs)
scaffold0049 (350-436)||(66863-66951)
[»] scaffold0217 (1 HSPs)
scaffold0217 (299-436)||(7309-7448)
[»] scaffold0102 (1 HSPs)
scaffold0102 (292-437)||(39143-39290)
[»] scaffold0019 (1 HSPs)
scaffold0019 (292-437)||(161860-162007)
[»] scaffold0459 (1 HSPs)
scaffold0459 (239-437)||(10694-10891)
[»] scaffold0366 (2 HSPs)
scaffold0366 (239-437)||(9299-9497)
scaffold0366 (239-387)||(12050-12198)
[»] scaffold0051 (1 HSPs)
scaffold0051 (299-437)||(52870-53010)
[»] scaffold1175 (1 HSPs)
scaffold1175 (350-436)||(2426-2514)
[»] scaffold0623 (1 HSPs)
scaffold0623 (239-436)||(1057-1254)
[»] scaffold0199 (1 HSPs)
scaffold0199 (239-337)||(8508-8605)
[»] scaffold0079 (1 HSPs)
scaffold0079 (302-368)||(53103-53169)
[»] scaffold0300 (1 HSPs)
scaffold0300 (274-331)||(4381-4438)


Alignment Details
Target: chr4 (Bit Score: 307; Significance: 1e-173; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 437
Target Start/End: Original strand, 28790875 - 28791312
Alignment:
Q  1 gctttgtttaaatcaagatcacctnnnnnnngtttaagagtgacactaaatttgtggaagacgtttagtgatcgagcaataaagtagctaacaaagacta 100  Q
    ||||||| ||||||||||||||||       |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  28790875 gctttgtataaatcaagatcacctaaaaaaagtttaagagtgacactaaatttgtggaacacgtttagtgatcgagcaacaaagtagctaacaaagacta 28790974  T
Q  101 aataagggtctttccgtcgagaaccagatgattaacatcaaatgagtgtttttacatttcnnnnnnngttatgagtcttagatattttaattgagnnnnn 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||       ||||| ||||||||||||||||||||||         
T  28790975 aataagggtctttccgtcgagaaccagatgattaacatcaaatgagattttttacatttcaaaaaaagttattagtcttagatattttaattgagttttt 28791074  T
Q  201 nnaatagaaagttagtataatatgacgataggtaacttatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttag 300  Q
      ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28791075 ttaatagaaagttagtatagtatgacgatacgtaacttatttggggttggtctagtgactgatttaggatattggagtatgctctctcttaaggtcttag 28791174  T
Q  301 gttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagttctt 399  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | ||||||    
T  28791175 gttccattacctctggtgtcaatttcggtgggtaagtctatacaaaactttgctctggctttaaacgggtctccacaagtgggcggtgagattggttctt 28791274  T
Q  400 tcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28791275 tcgaattagtcggtccttgaatcggatatcgagttttc 28791312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 436
Target Start/End: Complemental strand, 33696425 - 33696279
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||||||| ||||||||| |||||||||||||| ||||| ||||| | ||| |||||||||||||| |||  |||| ||||||||||||||    
T  33696425 aggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtga 33696327  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || || ||| |||||||  | ||||||||||||||||||||||    
T  33696326 gattggtcctctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 54127540 - 54127341
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||||||| ||||| ||| |||||||||||||| ||||    
T  54127540 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagt 54127442  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    ||||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||||| |||||| ||||||  ||||||    
T  54127441 ctatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttt 54127343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 40059050 - 40058851
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| ||||  |||||| |||||| |||  |||||||| |||||||||||||| ||||    
T  40059050 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagt 40058952  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  40058951 ccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 40058853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 27528941 - 27528794
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | ||| |||||||||||| |||||  |||| ||||||||||||||    
T  27528941 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttatacggggcccccgcaagtgggcggtga 27528843  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  27528842 gattggtcccctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 34723857 - 34723996
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| ||||||||| |||||||||||||| ||||| ||||||| | ||||||||||||||||||||  |||| |||||||| |||| || | ||    
T  34723857 aggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagc-ttgctctggctttaaacggggcccccgcaagtgggtggtgggattggt 34723955  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     || ||| |||||||| | ||||||||||||| ||||||||    
T  34723956 cctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 34844904 - 34844757
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| |||  |||||||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||| |||||||||||||     
T  34844904 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgg 34844806  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  34844805 gattggtcccctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 435
Target Start/End: Original strand, 52983670 - 52983815
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| ||||||| |||||| ||||| ||||| | ||| ||||||||||||||||||  |||| |||||||||||||     
T  52983670 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgg 52983768  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  52983769 gattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 434
Target Start/End: Complemental strand, 20078130 - 20077986
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccccac--aagtgggcggtga 388  Q
    |||||| |||||  ||| || |||||| |||||||||||||| ||||| ||||| | ||| |||||||||||||||||| ||| |  ||||||||||||     
T  20078130 aggtctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgtaagtgggcggtgg 20078032  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    || ||||||  ||| |||||||| | ||||||||||||| ||||||    
T  20078031 gattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 32986196 - 32986395
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||||||| ||||||||| |||||||||||||| ||||    
T  32986196 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagt 32986294  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | |||||||| ||||||| |||  |||| ||||||||||||| || | || |  ||| | |||||| | ||||||||||||| |||||||    
T  32986295 ccatacagagc-ttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttt 32986393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 38740895 - 38740977
Alignment:
Q  286 ctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgg 368  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||| || ||||||||| || |||||| || ||| ||||||    
T  38740895 ctcttaaggtctcaggttcgattccctctggtgtcaatttcggtggacaggtctatacagaattttgctttgacttaaaacgg 38740977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 49287909 - 49288054
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggc-cccacaagtgggcggtgag 389  Q
    |||||| |||||| |||  |||||||| |||||||||||||| ||||| |||||||| |||||| ||||||||||||||| ||| |||||||||| ||||    
T  49287909 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaa-tttgctatggctttaaacgggctcccgcaagtgggcgctgag 49288007  T
Q  390 actagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    | | || |  ||| |||||||| | |||||||| ||||  |||||||    
T  49288008 attggtcccctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 436
Target Start/End: Original strand, 7093508 - 7093568
Alignment:
Q  376 aagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||||||||||| || | || | ||||||||||||||||||||||||||||||||||||||    
T  7093508 aagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagtttt 7093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 33992677 - 33992773
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggt 386  Q
    ||||||||||||| |||  |||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| ||||||||||||    
T  33992677 aggtcttaggttcgattctctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaacggggcccccgcaagtgggcggt 33992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 34835528 - 34835621
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc 333  Q
    |||||||||||||||||||  ||  || |||| || |||| ||||| |||||||||||| | |||| ||| ||||||||||||||||||||||||    
T  34835528 atttggggttggtctagtggttggcttgggatcttagagtttgctc-ctcttaaggtctcatgttcgattccctctggtgtcaatttcggtgggc 34835621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 18875655 - 18875571
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtggg 382  Q
    |||||| ||| |||||| ||||||||||||||||| ||||| ||||| | ||| |||||||||||||||||| |||||||||||||    
T  18875655 aggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccacaagtggg 18875571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 20566408 - 20566547
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacg--ggccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||  | |||| |||||||||| || || | ||    
T  20566408 aggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcgctgggattggt 20566506  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     |  ||  |||||||| | ||||||||||||||||||||||    
T  20566507 cccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 55961881 - 55961753
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagttctttcgaatta 407  Q
    ||||||||| |||||||||||||| ||||| ||||| | ||| |||||| ||||||||||| |||||||||||||||||| || | |||| |||| ||||    
T  55961881 cctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggccccacaagtgggcggtgggattggttccttcggatta 55961783  T
Q  408 gtcggtccttggatcggatatcgagttttc 437  Q
     ||| | |||| |||| ||| ||| |||||    
T  55961782 atcgattcttgaatcgaataccgaattttc 55961753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 25969625 - 25969566
Alignment:
Q  313 ctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgggcccc 373  Q
    |||||| |||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||    
T  25969625 ctggtgccaatttcggtggccaagtccatacagaactt-gctctggctttaaacgggcccc 25969566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 365
Target Start/End: Original strand, 25852213 - 25852338
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  25852213 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 25852311  T
Q  338 ctatacaaaactttgctctggctttaaa 365  Q
    | ||||| | | ||||||||||||||||    
T  25852312 ccatacagagc-ttgctctggctttaaa 25852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 12710206 - 12710299
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctt 361  Q
    |||| ||||||| |||| ||||||||||||| |||||| ||| ||| |  ||||||||||||||| |||||| |||||   ||||||||||||||    
T  12710206 ggatcttggagtatgct-tctcttaaggtctcaggttcgattccctttaatgtcaatttcggtggacaagtccatacagtgctttgctctggctt 12710299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 437
Target Start/End: Complemental strand, 45787843 - 45787703
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| |||||| || ||||||| |||||| ||||| ||||| | ||| ||||||||||||||| ||  |||| ||||||| ||||| || | ||    
T  45787843 aggttcgattccctctgatgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtggacggtgggattggt 45787745  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     |  |||||||||||| | ||||||||||||| |||||||||    
T  45787744 cccctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 22630332 - 22630263
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctt 361  Q
    |||||| |||||| ||| ||||||||| |||||| |||||||||||| |||||||  |||||| ||||||    
T  22630332 aggtctcaggttcgattccctctggtgccaattttggtgggcaagtccatacaaagttttgctttggctt 22630263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 369
Target Start/End: Original strand, 10125872 - 10125948
Alignment:
Q  293 ggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg 369  Q
    |||||||||||  ||| || |||||| ||||||| ||||||||| | ||||| | ||||||||| ||||||||||||    
T  10125872 ggtcttaggtttgattccccctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggg 10125948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 21387624 - 21387534
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    |||||| ||| ||| | |||||||||| ||||||| ||||||||||| | ||| ||||||||||||||||||  |||| |||||||||||||    
T  21387624 aggttcgattccctatagtgtcaattttggtgggctaagtctatacagagctt-gctctggctttaaacgggatccccgcaagtgggcggtg 21387534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 437
Target Start/End: Complemental strand, 7392110 - 7391964
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgggccccaca-agtgggcggtgag 389  Q
    ||||||| |||||| ||| ||| ||||| ||||||||||||  ||||| |||| | | ||||||||||||||||| ||| ||| || ||||||||||| |    
T  7392110 aaggtctcaggttcgattccctatggtgccaatttcggtggttaagtccatac-agagtttgctctggctttaaatgggacccccatagtgggcggtggg 7392012  T
Q  390 actagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    | |  | |  ||| |||||||||| ||| ||| ||||| |||||||||    
T  7392011 attgttcccctcggattagtcggttcttcgattggataccgagttttc 7391964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 373
Target Start/End: Complemental strand, 42281216 - 42281169
Alignment:
Q  326 cggtgggcaagtctatacaaaactttgctctggctttaaacgggcccc 373  Q
    |||||||| |||| ||||| |||||||||||||||||||| |||||||    
T  42281216 cggtgggctagtccatacataactttgctctggctttaaatgggcccc 42281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 16339757 - 16339691
Alignment:
Q  302 ttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgg 368  Q
    ||||||| ||||||||  |||||||| ||| |||||| |||||||||||| || |||||| ||||||    
T  16339757 ttcaatttcctctggtaccaatttcgatggacaagtccatacaaaactttactttggcttaaaacgg 16339691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 436
Target Start/End: Original strand, 35229246 - 35229365
Alignment:
Q  320 caatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtgagactagttctttcgaattagtcggtcc 415  Q
    |||||||||||||| ||||| ||||| | ||| |||||| |||||||||||   ||||||||||| |||||| || | || |  |||||||||||| | |    
T  35229246 caatttcggtgggctaagtccatacatagctt-gctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgattc 35229344  T
Q  416 ttggatcggatatcgagtttt 436  Q
    |||||||||||| ||| ||||    
T  35229345 ttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 39288917 - 39288978
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctt 361  Q
    |||||||||| || ||| |||||||||||||||||||||| ||||| | | ||||||||||||    
T  39288917 aggttcaattcccactgatgtcaatttcggtgggcaagtccatacagagc-ttgctctggctt 39288978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 429
Target Start/End: Complemental strand, 9517787 - 9517648
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| |||  |||||||| ||||||| |||||| ||||| ||||| | ||| |||||| |||||||||||  |||| || ||||| |||||    
T  9517787 aggtctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaggtgggtggtga 9517689  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatc 429  Q
    || | || |  ||| |||||||| | |||||||||||||||    
T  9517688 gattggtcccctcggattagtcgattcttggatcggatatc 9517648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 387
Target Start/End: Original strand, 32990488 - 32990583
Alignment:
Q  294 gtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    |||| |||||| ||| ||| | ||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||| |||||||||||||    
T  32990488 gtctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtg 32990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 13771611 - 13771551
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg 369  Q
    |||||| ||||||| ||||||||| ||||| |||| || || |||||||||||||||||||    
T  13771611 cctctgatgtcaatctcggtgggctaagtccatacgaagctatgctctggctttaaacggg 13771551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 31334545 - 31334600
Alignment:
Q  241 ttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtct 297  Q
    |||||||| | ||||||  |||||| ||||||||||||||||| |||||||||||||    
T  31334545 ttggggttcgcctagtggttgatttgggatattggagtgtgct-tctcttaaggtct 31334600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 437
Target Start/End: Original strand, 44343574 - 44343712
Alignment:
Q  301 gttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggcc--ccacaagtgggcggtgagactagttc 397  Q
    |||| ||| |||||||||  ||||| ||||||| ||||| ||||| | ||| |||||| ||||||||||| |  || ||||||||||||| || | || |    
T  44343574 gttcgattccctctggtgctaattttggtgggctaagtccatacagagctt-gctctgactttaaacggggctcccgcaagtgggcggtgggattggtcc 44343672  T
Q  398 tttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
      |||||||||||| | |||| |||||||| |||||||||    
T  44343673 cctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 436
Target Start/End: Original strand, 28646971 - 28647170
Alignment:
Q  238 tatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagt 337  Q
    ||||||||||||| ||||||| ||| || |||| |||||||||||| ||||| ||||||| |||||| ||| ||||||||| ||||||||||||||||||    
T  28646971 tatttggggttggcctagtgattgacttgggatcttggagtgtgct-tctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggcaagt 28647069  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| |  |||||||||||||  ||||||  |||||||||||||||||| || | ||||  ||||||||||| ||||||||||||||||||||||||    
T  28647070 caatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagttt 28647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 21574301 - 21574101
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacc-tctggtgtcaatttcggtgggcaagt 337  Q
    |||||||||||| ||||||  || ||| |||| ||||||||||||| |||| ||||||  |||||| ||| || | ||||| ||| ||||||||||||||    
T  21574301 atttggggttggcctagtggttggtttgggattttggagtgtgctc-ctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggcaagt 21574203  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | |||||| | |||||  ||||||  |||||||||| |||||||||| | || |  ||| |||||||||||||||||||||||| |||||||    
T  21574202 ccatacagagctttgcccaggcttagaacggggcccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttt 21574103  T
Q  436 tc 437  Q
    ||    
T  21574102 tc 21574101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 437
Target Start/End: Complemental strand, 654851 - 654704
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtga 388  Q
    ||||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | |||||||||||||||||||| |||| |||||||||||||     
T  654851 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggcccccgcaagtgggcggtgg 654753  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||||| ||||||||||||| |||||||||    
T  654752 gattggtcccctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 383
Target Start/End: Complemental strand, 8435893 - 8435750
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||||||||||  ||| || |||| ||||||| ||||| || | ||| |||||||||| ||| ||||||||| |||||||||||||||||||    
T  8435893 atttggggttggtctagtggttgacttgggatcttggagtttgctc-ctttgaagatcttaggttcgatttcctctggtgccaatttcggtgggcaagtc 8435795  T
Q  339 tatacaaaactttgctctggctttaaacgggccccacaagtgggc 383  Q
     ||||||| ||||| | |||||||||  || |||| |||||||||    
T  8435794 catacaaagctttgttttggctttaatgggcccccgcaagtgggc 8435750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 275 - 437
Target Start/End: Complemental strand, 23330901 - 23330738
Alignment:
Q  275 gagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccc 372  Q
    |||||||||| |||| ||||||| |||||| | | |||| |||| ||||||||||||||||||| ||||| | |||||||||||||| |||||||  | |    
T  23330901 gagtgtgctc-ctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacgggacctc 23330803  T
Q  373 cacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    | |||||||||||| ||| | || |  || ||||||||  ||||||||||||||| |||||||||    
T  23330802 cgcaagtgggcggtaagattggtcccctcaaattagtcaatccttggatcggataccgagttttc 23330738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 11910106 - 11909954
Alignment:
Q  286 ctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacg-ggcccc-acaagtgggc 383  Q
    |||| ||||||| ||||||||||  ||||||||||||||| ||||| |||||| |||| || ||||| ||| |||||||||| |||||| |||||||| |    
T  11910106 ctctcaaggtctcaggttcaattttctctggtgtcaattttggtggtcaagtccatacgaagctttgttctagctttaaacgaggcccctacaagtggac 11910007  T
Q  384 ggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||| || | || || |||||||||||| |||||| ||  |||||||||||||    
T  11910006 ggtgggattggtcctctcgaattagtcgatccttgaattagatatcgagtttt 11909954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 2751274 - 2751473
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  2751274 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 2751372  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||| ||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  2751373 ccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 2751471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 437
Target Start/End: Original strand, 21835213 - 21835353
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||| ||||||||||||| || | ||    
T  21835213 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 21835311  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     |  ||| |||||||| | |||||||||||||||||||||||    
T  21835312 cccctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 22119891 - 22120090
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  22119891 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 22119989  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  22119990 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 22120088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 40543108 - 40542909
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  40543108 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 40543010  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  40543009 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 40542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 436
Target Start/End: Original strand, 22696317 - 22696522
Alignment:
Q  233 taacttatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtggg 332  Q
    ||||| ||| |||||||| ||||||  |||||| |||| ||||||||||||| |||| ||||||| |||||  ||| ||||||||| |||||||||||||    
T  22696317 taactcattaggggttggcctagtggttgatttgggatcttggagtgtgctc-ctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg 22696415  T
Q  333 caagtctatacaaaactttgctctggctttaaacg-ggccc---cacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatat 428  Q
      | || ||||| | ||||||||||||||  |||| |||||   | ||||| ||||| | || | || || ||| ||||||||||||||||||||||||     
T  22696416 -gactccatacagagctttgctctggcttagaacgaggcccccgcgcaagtaggcggcgggattggtcctctcggattagtcggtccttggatcggatac 22696514  T
Q  429 cgagtttt 436  Q
    ||||||||    
T  22696515 cgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 22703541 - 22703688
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||  |||| |||||||||||||     
T  22703541 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagc-ttgctctggctttaaacgggacccccgcaagtgggcggtgg 22703639  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||| ||||||||| | |||||||    
T  22703640 gattggtcccctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 29861725 - 29861872
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| ||| ||||||||||||||||||||  |||| |||||||||||||     
T  29861725 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 29861823  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || |  | |  |||||||||||| | ||| ||||||||| |||||||||    
T  29861824 gattgatcccctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 437
Target Start/End: Original strand, 11997880 - 11998051
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaa 365  Q
    |||| ||||||| ||||| ||||  |||||| |||||| ||| ||||||||| |||||||||| ||| ||||| ||||| | ||| ||||||||||||||    
T  11997880 ggatcttggagtttgctc-ctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagctt-gctctggctttaaa 11997977  T
Q  366 cggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    | ||  |||| ||||||||||||| || | || |  |||||||||||| | ||||||||||||| |||||||||    
T  11997978 ctgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 436
Target Start/End: Original strand, 7275280 - 7275478
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  7275280 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 7275378  T
Q  338 ctatacaaaactttgctctggctttaaac--gggccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | |||||||||||||||||  || |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  7275379 ccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 7275477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 436
Target Start/End: Complemental strand, 17197096 - 17196950
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| | |||| ||| ||||||||| ||||||||||| || ||||| ||||| | ||| ||||||||||||||||||  |||| |||||||||||||     
T  17197096 aggtctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgg 17196998  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || |  |||||||||||| | ||||||||||||| ||||||||    
T  17196997 gattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 7176060 - 7175861
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  7176060 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 7175962  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||| ||  |||| ||||||||||||| || | || |  ||| |||||||| | |||||||||||||  ||||||    
T  7175961 ccatacagagc-ttgctctggctttaaacaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttt 7175863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 28089889 - 28090021
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaa---actttgctctggctttaaacgggcccca-caagtgggcggtgagactagttctttcgaa 404  Q
    |||||||||||||||||||||||| ||||| |||||||   |  |||||||||||||||| |||||||  |||||||||| ||||| | || |  ||| |    
T  28089889 cctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcgga 28089988  T
Q  405 ttagtcggtccttggatcggatatcgagttttc 437  Q
    ||||||| | ||||||||||||| |||||||||    
T  28089989 ttagtcgattcttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 21218031 - 21217832
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| |||||| || |||||||||||||| ||||    
T  21218031 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagt 21217933  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||| ||||||||||||  |||||||||||||||||| || |  | |  ||| |||||| | | ||||||||||||| |||||||    
T  21217932 ccatacagagc-ttgctctagctttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagttt 21217834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 427
Target Start/End: Complemental strand, 1766265 - 1766153
Alignment:
Q  316 gtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaac-gggccccacaagtgggcggtgagactagttctttcgaattagtcggtc 414  Q
    ||||||||||||||||| ||||| ||||| ||||||||  ||||||  ||| ||||||||||||||||||||  || | || |  ||| ||||||||||     
T  1766265 gtgtcaatttcggtgggtaagtccatacagaactttgccttggcttagaacggggccccacaagtgggcggttggattggtcccctcggattagtcggta 1766166  T
Q  415 cttggatcggata 427  Q
    |||| ||||||||    
T  1766165 cttgaatcggata 1766153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 387
Target Start/End: Original strand, 10091191 - 10091340
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||| | |||||||||||||| ||||    
T  10091191 atttggggttggtctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagt 10091289  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    | ||||| | | |||||||||||||||| |||  |||| |||||||||||||    
T  10091290 ccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtg 10091340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 23012654 - 23012557
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||||||||  ||| ||||| ||| |||||||||||||| ||||| ||||| | | |||||||||||||||| |||  ||||||||||||||||||    
T  23012654 aggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatggggcccccacaagtgggcggtg 23012557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 365
Target Start/End: Original strand, 42814895 - 42814992
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaa 365  Q
    |||| ||||||| ||||| ||||| | |||| |||||| ||| |||||||||||||||||||||||| ||||| ||||||| | |||||||| |||||||    
T  42814895 ggatcttggagtttgctc-ctcttgaagtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagc-ttgctctgactttaaa 42814992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 2344302 - 2344501
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||| ||| || ||| ||| | ||||||| |||||| ||||||| ||||    
T  2344302 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagt 2344400  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||||  | ||||||||||||||  |||| |||||| |||||| || | || |  ||| |||||||||||||||||||||||| |||||||    
T  2344401 ccatacagagctttttt-tggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 2344499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 344
Target Start/End: Complemental strand, 12211733 - 12211629
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  ||  ||||||| ||||||||||||| |||| ||| ||| |||||  ||| ||||||||| |||||||| ||| ||||||    
T  12211733 atttggggttggcctagtggttggcttaggatcttggagtgtgctc-ctctcaagatctcaggtttgatttcctctggtgccaatttcgatggacaagtc 12211635  T
Q  339 tataca 344  Q
     |||||    
T  12211634 cataca 12211629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 386
Target Start/End: Complemental strand, 13332626 - 13332475
Alignment:
Q  234 aacttatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc 333  Q
    |||| |||||||||||| ||||||  ||  || |||| ||||||| ||||| ||| | |||||| |||| | ||| ||||||| | ||||||||||||||    
T  13332626 aactcatttggggttggcctagtggttggcttgggatcttggagtttgctc-ctcctgaggtctcaggtacgattccctctggagccaatttcggtgggc 13332528  T
Q  334 -aagtctatacaaaactttgctctggctttaaacgggccccacaagtgggcggt 386  Q
     ||||| ||||| | |||  |||||||||||||| |||||| ||||||| ||||    
T  13332527 taagtccatacagagctta-ctctggctttaaacaggccccgcaagtggccggt 13332475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 16374049 - 16374196
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| || ||| ||| ||||||||| |||||||||||||  ||||| ||||| || |||||| ||||||||||||||  |||| ||| ||| |||||     
T  16374049 aggtctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaa-tttgctatggctttaaacgggacccccgcaaatggacggtgg 16374147  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  16374148 gattggtcccctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 18044169 - 18044308
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| ||||| ||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  ||||||||||||| ||||  | | ||    
T  18044169 aggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggtggtggaattggt 18044267  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     |  ||  |||||||| | ||||||||||||| ||||||||    
T  18044268 cccctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 387
Target Start/End: Original strand, 2103058 - 2103207
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||| | |||||||||||||| ||||    
T  2103058 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagt 2103156  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    | ||||| | | |||||||||||||||| |||  |||| |||||||||||||    
T  2103157 ccatacagagc-ttgctctggctttaaatggggcccccgcaagtgggcggtg 2103207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 25956329 - 25956258
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctataca 344  Q
    ||||||||||||| |||| ||||||||||||||||||  | ||||||||||| |||||||  ||||| |||||    
T  25956329 ttggagtgtgctc-ctctcaaggtcttaggttcaattctccctggtgtcaatgtcggtggctaagtccataca 25956258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 437
Target Start/End: Original strand, 31274027 - 31274115
Alignment:
Q  350 ttgctctggctttaaacgggcc-ccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    |||||||||||||||||||| | || ||||||||| |||||| | || |  |||||||||||| | |||||| |||||| |||||||||    
T  31274027 ttgctctggctttaaacggggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 23092169 - 23092298
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaatt 406  Q
    ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| ||| ||| ||||| || | || |  ||| |||    
T  23092169 cctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggatt 23092267  T
Q  407 agtcggtccttggatcggatatcgagttttc 437  Q
    ||||| | | ||||||||||| |||||||||    
T  23092268 agtcgattcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 390
Target Start/End: Original strand, 21373793 - 21373865
Alignment:
Q  320 caatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgaga 390  Q
    |||||||||||||| ||||||||||| | ||| ||||||||||||||||||  |||| ||||||| ||||||||    
T  21373793 caatttcggtgggctaagtctatacagagctt-gctctggctttaaacggggcccccgcaagtggacggtgaga 21373865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 40332135 - 40332195
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc 333  Q
    ||||||| ||||| |||| ||||||| |||||| ||| |||||||||||||||||| |||||    
T  40332135 ttggagtttgctc-ctctaaaggtctcaggttcgatttcctctggtgtcaatttcgatgggc 40332195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 387
Target Start/End: Original strand, 19421262 - 19421383
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaa 365  Q
    |||| ||||||| ||||| ||||  |||||| |||||| ||| | |||||||||||||||| ||||| ||||| ||||| | | |||||||| |||||||    
T  19421262 ggatcttggagtttgctc-ctctagaggtctcaggttcgatttcttctggtgtcaatttcgatgggctaagtccatacagagc-ttgctctgactttaaa 19421359  T
Q  366 cggg--ccccacaagtgggcggtg 387  Q
     |||   |||||||||||||||||    
T  19421360 tggggcgcccacaagtgggcggtg 19421383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 373
Target Start/End: Complemental strand, 39145796 - 39145716
Alignment:
Q  294 gtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggcccc 373  Q
    ||||| ||||| ||| ||| ||||| |||||||||||||| ||||| |||  | |  ||||||||||||||||||||||||    
T  39145796 gtcttcggttcgattccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggctttaaacgggcccc 39145716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 19145609 - 19145412
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  ||| || |||| ||||||| ||||| |||| |||||||  ||||| ||| ||||||||| |||||||||||||||||||    
T  19145609 atttggggttggcctagtggttgacttgggatcttggagtatgctc-ctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaagtc 19145511  T
Q  339 tatacaaaactttgctctggctttaaacgg-gccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     ||||| | |||||||||||||||||| ||  |||| ||||||||||||| || | || |  ||| |||||| ||| ||||||||||||| ||||||||    
T  19145510 catacagagctttgctctggctttaaatggtcccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 32059638 - 32059439
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| | ||||||| |||||||||||||| ||||    
T  32059638 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagt 32059540  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||||||||||||||||||| |||||||    
T  32059539 ccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 32059441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 436
Target Start/End: Complemental strand, 6014419 - 6014280
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccccac--aagtgggcggtgagactagt 395  Q
    |||||| ||||| ||||||| |||||||||||||  ||||| ||||| | ||| ||||||||||||||||||  ||||  ||||||||||||||| ||||    
T  6014419 aggttcgattacttctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggtccacgcaagtgggcggtgagattagt 6014321  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     |  |||||||||||| | ||||||||||||||||||||||    
T  6014320 cccctcgaattagtcgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 27498877 - 27498730
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| |||||||||||||     
T  27498877 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 27498779  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  27498778 gattggtcccctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 19456338 - 19456210
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagttctttcgaatta 407  Q
    ||||||||| |||||||||||||| ||||| ||||| | ||| |||||||||||||||||| |||| ||||||||||||| || | || |  ||| ||||    
T  19456338 cctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattggtcccctcggatta 19456240  T
Q  408 gtcggtccttggatcggatatcgagttttc 437  Q
    |||| | ||||||||||||| |||||||||    
T  19456239 gtcgattcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 267 - 436
Target Start/End: Original strand, 36895452 - 36895622
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaac 366  Q
    |||| ||||||||||||| |||| ||||| | | |||| ||| ||||||||  |||||||||||| |||||| ||||||| ||||||||||||||  |||    
T  36895452 ggatcttggagtgtgctc-ctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggcttagaac 36895550  T
Q  367 g--ggccccacaagtgggcggtgagactagttct-ttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |  | | || ||||||||||| | || | |||||  |||||||||||||| ||||||||||||| ||||||||    
T  36895551 gtagccgccgcaagtgggcgggggga-ttgttctcctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 11926700 - 11926501
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  || ||| |||| ||||||| ||||| |||   |||||| |||||  ||| ||||||||| |||||||||||||| ||||    
T  11926700 atttggggttggcctagtggttggtttgggatcttggagtttgctc-ctccagaggtctcaggttagattccctctggtgccaatttcggtgggctaagt 11926602  T
Q  338 ctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    | ||||| | | ||||||||||||||||||||   |||| |||||||| |||| || | || |  ||| |||||||| | ||||||||||||| ||||||    
T  11926601 ccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagtt 11926503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 38684259 - 38684405
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgag 389  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | |||||||||||||||||||| |||| |||||| |||||| |    
T  38684259 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggcccccgcaagtgagcggtggg 38684357  T
Q  390 actagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    | | || |  ||| |||||||| | ||||||||||||| ||| |||||    
T  38684358 attggtcccctcggattagtcgattcttggatcggataccgatttttc 38684405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 8484859 - 8484660
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||  ||| ||||||||| |||||||||||||| ||||    
T  8484859 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagt 8484761  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
      ||||| | ||| ||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  8484760 tcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 8484662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 30485879 - 30486026
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacg--ggccccacaagtgggcggtga 388  Q
    |||||| |||||| |||  ||||||||||||||||||||||| ||||| ||||| | | ||||||||||||||||||  | |||| |||||||||||||     
T  30485879 aggtctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgatgcccccgcaagtgggcggtgg 30485977  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||  | ||||||||||||| |||||||||    
T  30485978 gattggtcccctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 34310193 - 34310339
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||| ||||||| ||||| ||||| | ||| ||||||||||||||||||  ||||| |||||| |||||     
T  34310193 aggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagctt-gctctggctttaaacgggacccccataagtggacggtgg 34310291  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || |  |||||||| ||| | ||||||||||||| ||||||||    
T  34310292 gattggtcccctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 390
Target Start/End: Complemental strand, 15971268 - 15971168
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| |||||| ||||||||||||||||| ||||| ||||| | | |||||||| |||||||||||  |||| ||||||||||||||    
T  15971268 aggtctcaggttcgatttcctctgatgtcaatttcggtgggctaagtccatacatagc-ttgctctgactttaaacgggacccccgcaagtgggcggtga 15971170  T
Q  389 ga 390  Q
    ||    
T  15971169 ga 15971168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 429
Target Start/End: Original strand, 42193536 - 42193673
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccccacaagtgggcggtgaga 390  Q
    |||||| |||||| ||| |||||| || |||||||||||||| ||||||||||| |  |||||| |||||||||| || |||| ||||||||||||| |     
T  42193536 aggtctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagag-tttgctttggctttaaatggaccccgcaagtgggcggtgggg 42193634  T
Q  391 ctagttctttcgaattagtcggtccttggatcggatatc 429  Q
     | || || ||| |||||||| | |||||||| ||||||    
T  42193635 ttggtcctctcggattagtcgattcttggatcagatatc 42193673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 437
Target Start/End: Complemental strand, 7085764 - 7085625
Alignment:
Q  300 ggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagtt 396  Q
    ||||| ||| ||||| |||||||||||||||||| ||||| ||||| | | |||||||| |||||||||||  |||| ||||||||||||| || | ||     
T  7085764 ggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacggggtccccgcaagtgggcggtgggattggtc 7085666  T
Q  397 ctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    |  ||| |||||||| | |||| |||||||| |||||||||    
T  7085665 ccctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 15641251 - 15641105
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||| | |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| |||||||||||||     
T  15641251 aggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 15641153  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||| ||||||||| |||||||||    
T  15641152 gattggtcccctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 18207258 - 18207405
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaac--gggccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| |||| |||| |||||||||||||| ||||| ||||| | | ||| |||||||||||||  || |||| |||||||||||||     
T  18207258 aggtctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagc-ttgttctggctttaaacgaggcccccgcaagtgggcggtgg 18207356  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  18207357 gattggtcccctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 437
Target Start/End: Original strand, 35425081 - 35425211
Alignment:
Q  309 acctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaat 405  Q
    |||||| ||| |||||||||||||| ||||| ||||| | ||  ||||||||||||||||||  |||| ||||||||||||| || | || || ||| ||    
T  35425081 acctctagtgccaatttcggtgggctaagtccatacagagctc-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggat 35425179  T
Q  406 tagtcggtccttggatcggatatcgagttttc 437  Q
    |||||| | ||||||||||||| ||| |||||    
T  35425180 tagtcgattcttggatcggataccgaattttc 35425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 33709647 - 33709502
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| | |||| ||| ||||||||| |||||||||||||| ||||| ||||| |     ||||||||||||||||||  ||||||||||||||||||     
T  33709647 aggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagaga---gctctggctttaaacgggacccccacaagtgggcggtgg 33709551  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| || ||||||    
T  33709550 gattggtcccctcggattagtcgattcttggatcggataccgtgttttc 33709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 4603776 - 4603975
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||| ||| | |||| ||| | ||||||| |||||||| ||||| ||||    
T  4603776 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagt 4603874  T
Q  338 ctatacaaaactttgctctggctttaaacgggcccca--caagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||  |||||||||||||||||| |||   ||||||| ||||| || | || |  ||| |||||||||||||||||||||||| |||||||    
T  4603875 ccatacagagctc-gctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 4603973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 437
Target Start/End: Complemental strand, 12398595 - 12398447
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||| |||||| ||| ||| |||||||||||||||||| | ||||  ||||| | | |||||||||||||||| |||  |||| ||| ||| |||||    
T  12398595 aaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagagc-ttgctctggctttaaatggggcccccgcaaatggacggtg 12398497  T
Q  388 agactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    ||| |  | || || ||||||||||| ||||||| ||||| |||||||||    
T  12398496 agattgatcctctcaaattagtcggttcttggattggataccgagttttc 12398447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 436
Target Start/End: Complemental strand, 24158311 - 24158166
Alignment:
Q  293 ggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgaga 390  Q
    ||||| |||||| ||| | |||||||||||||||| |||| ||||| ||||| | |||| |||||||||  ||||||  | |  ||||||||||||||||    
T  24158311 ggtctcaggttcgattccttctggtgtcaatttcgatgggtaagtccatacatagctttactctggcttagaacggggcctctgcaagtgggcggtgaga 24158212  T
Q  391 ctagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     | || |  ||  ||||||||||||||| |||||||| ||| ||||    
T  24158211 ttggtcccctcagattagtcggtccttgaatcggataccgaatttt 24158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 386
Target Start/End: Original strand, 25586931 - 25587080
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  25586931 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggctaagt 25587029  T
Q  338 ctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggt 386  Q
    | ||||| | | ||||||||||||||||| ||   |||| ||||||||||||    
T  25587030 ccatacagagc-ttgctctggctttaaacaggaccccccccaagtgggcggt 25587080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 930518 - 930486
Alignment:
Q  404 attagtcggtccttggatcggatatcgagtttt 436  Q
    |||||||||||||||||||||||||||||||||    
T  930518 attagtcggtccttggatcggatatcgagtttt 930486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 437
Target Start/End: Complemental strand, 41351191 - 41351103
Alignment:
Q  350 ttgctctggctttaaacgggcc-ccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    |||||||||||||||||||| | || ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  41351191 ttgctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 23290727 - 23290793
Alignment:
Q  370 ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||| |||||||||||||||| ||||| |||   |||||||||||||||||||| ||| | ||||||    
T  23290727 ccccgcaagtgggcggtgagattagtttttttagattagtcggtccttggatcgaataccaagtttt 23290793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 30700640 - 30700603
Alignment:
Q  287 tcttaaggtcttaggttcaattacctctggtgtcaatt 324  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  30700640 tcttaaggtctcaggttcaattatctctggtgtcaatt 30700603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 37495098 - 37495173
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacg 367  Q
    |||||| |||||| ||| ||||||||| |||||| ||||||| ||||| ||||| | ||| ||||||||||||||||    
T  37495098 aggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagctt-gctctggctttaaacg 37495173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 9e-28; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 8192549 - 8192351
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  ||  || |||| ||||||||||||| |||| ||||||| |||||| ||| ||||||||| |||| ||||||||||||||    
T  8192549 atttggggttggcctagtggttggcttgggatcttggagtgtgctc-ctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggcaagtc 8192451  T
Q  339 tatacaaaactttgctctggctttaaacgggccc-cacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     ||| | | ||||||||||||||  ||||| ||| | ||||||||||||| || | |  |  ||| |||||||||||||||||||||||| |||||||||    
T  8192450 catatagagctttgctctggcttagaacggcccctcgcaagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagttttc 8192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 44946251 - 44946052
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||| ||||| |||||||||||||| ||||    
T  44946251 atttggggttggtctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 44946153  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| ||||| ||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  44946152 ccatacagaactt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 44946054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 436
Target Start/End: Original strand, 17324760 - 17324961
Alignment:
Q  234 aacttatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc 333  Q
    |||| |||||||||||| ||||||  || ||| | || ||||||| ||||| |||   |||||| |||||| ||| ||||||||| ||||||||||||||    
T  17324760 aactcatttggggttggcctagtggttggtttggtatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggc 17324858  T
Q  334 -aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcga 431  Q
     ||||| ||||| | | |||||||||||||||| ||| |||||||||||||||||| || |||| |  || ||||||||| | ||| |||||||||||||    
T  17324859 taagtccatacagagc-ttgctctggctttaaatgggcccccacaagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggatatcga 17324956  T
Q  432 gtttt 436  Q
    |||||    
T  17324957 gtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 272 - 365
Target Start/End: Complemental strand, 4618850 - 4618758
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaa 365  Q
    ||||||| ||||| |||| ||||| | |||||| ||| || |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4618850 ttggagtatgctc-ctctcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccatacaaaactttgctctggctttaaa 4618758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 11941408 - 11941210
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||||||| ||| ||||| |||||| ||||||  ||||    
T  11941408 atttggggttggtctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcaattccctatggtgccaattttggtgggttaagt 11941310  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  11941309 ccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 11941211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 24196062 - 24196150
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccccacaagtgggcggtg 387  Q
    |||||| ||| |||||||||  ||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  24196062 aggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggccccgcaagtgggcggtg 24196150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 267 - 344
Target Start/End: Complemental strand, 28194303 - 28194227
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctataca 344  Q
    |||| ||||||||||||| ||||||||||||||||||| |||  |||||||| ||||||||||||||||||| |||||    
T  28194303 ggatcttggagtgtgctc-ctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggcaagtccataca 28194227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 30467028 - 30466830
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  || ||| |||||||||||| || || ||||  |||||| |||||| |||  ||||| || |||||||||||||| ||||    
T  30467028 atttggggttggcctagtggttggtttgggatattggagtttgttc-ctctagaggtctcaggttcgattctctctgctgccaatttcggtgggctaagt 30466930  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||| ||  |||| ||||||||| ||| || | || | |||| |||||||| | ||||||||||||| |||||||    
T  30466929 ccatacagagctt-gctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagttt 30466831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 43374471 - 43374329
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccccacaagtgggcggtgaga 390  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| |||| |||||||| | |||||||||||||||   | |||| |||||| |||||| ||    
T  43374471 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaagc-ttgctctggctttaa---gcccccgcaagtgagcggtggga 43374376  T
Q  391 ctagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     | || | |||| |||||||| | ||||||||||||| |||||||||    
T  43374375 ttggtcccttcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 5394067 - 5394215
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||| |||||| ||| |||||||||||||||||| ||||| ||||| |||| | | ||||||||| ||||||| |||  | || |||||||||||||    
T  5394067 aaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatac-agagtttgctctgactttaaatggggccgccgcaagtgggcggtg 5394165  T
Q  388 agactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     || | || | |||| |||||||||||||| ||||||||| ||| |||||    
T  5394166 ggattggtccgttcggattagtcggtccttagatcggataccgaattttc 5394215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 15037958 - 15038157
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||| |  |||| ||||||| ||||| |||  ||||||| |||||| ||| ||| ||||| |||||||||||||| ||||    
T  15037958 atttggggttggcctagtggttgactcgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 15038056  T
Q  338 ctatacaaaactttgctctggctttaaacg--ggccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||| ||||||||||||  | |||| ||||||||||||| || | || |  ||  |||||||| | ||||||||||||| |||||||    
T  15038057 ccatacagagc-ttgctttggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 15038155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 267 - 436
Target Start/End: Complemental strand, 19606015 - 19605846
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggcttt-aaa 365  Q
    |||| |||||||| |||| |||| ||||||| |||||| ||| |||||  ||  |||||||||||||||||| ||||| |   |||||||  |||  |||    
T  19606015 ggatcttggagtgcgctc-ctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggcaagtccatacagagtcttgctctcacttagaaa 19605917  T
Q  366 cgggccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     ||| |||||||||||||||||||| | || |  |||||||||| |   ||||||||||||||||||||||    
T  19605916 gggggcccacaagtgggcggtgagattggtcccctcgaattagttgacacttggatcggatatcgagtttt 19605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 41314043 - 41314120
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg 369  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||||||||| | | |||||||| |||||||||||    
T  41314043 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtctatacagagc-ttgctctgactttaaacggg 41314120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 33827719 - 33827572
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||| ||||| ||||| ||||| | ||| ||||||||||||||||||  |||  |||||||||||||     
T  33827719 aggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacgggacccctgcaagtgggcggtgg 33827621  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  | | |||||||| | ||||||||||||| |||||||||    
T  33827620 gattggtccccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 35171851 - 35171998
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| |||||||   |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||| |||||||||||||     
T  35171851 aggtctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgg 35171949  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | |||| |||||||| |||||||||    
T  35171950 gattggtcccctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 2140629 - 2140485
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||||||||||||||||   |||| ||||| | | |||||||||||||||| |||   |||| |||||||||||||     
T  2140629 aggtctcaggttcgattccctctggtgtcaatttcggtgg---agtccatacagagc-ttgctctggctttaaatgggcccccccgcaagtgggcggtgg 2140534  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| |  |||||||||||| |||||||||    
T  2140533 gattggtcccctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 436
Target Start/End: Original strand, 29698216 - 29698343
Alignment:
Q  310 cctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaac-gggccccacaagtgggcggtgagactagttctttcgaattag 408  Q
    ||||||||||||||||||||||||||||  ||||| | |||| ||||| ||| |||| || |||| ||| |||||| ||||| | || |  |||||| ||    
T  29698216 cctctggtgtcaatttcggtgggcaagttcatacagagctttactctgacttaaaacaggaccccgcaaatgggcgatgagattggtcccctcgaataag 29698315  T
Q  409 tcggtccttggatcggatatcgagtttt 436  Q
    | ||||||| ||||| ||| ||||||||    
T  29698316 ttggtccttagatcgtataccgagtttt 29698343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 36242458 - 36242361
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||| |  || | | ||||||||||||||||||||  |||| |||||||||||||    
T  36242458 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagc-ttgctctggctttaaacggggtccccgcaagtgggcggtg 36242361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 390
Target Start/End: Complemental strand, 38784377 - 38784227
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    ||||||||||| |||||||  ||  ||||||| ||||||| ||||| |||| ||| ||| |||||| ||| ||| ||||  | |||||||||| ||||||    
T  38784377 atttggggttgatctagtgtttgggttaggatcttggagtttgctc-ctctcaagttctaaggttcgattgcctttggtcacgatttcggtggacaagtc 38784279  T
Q  339 tatacaaaactttgctctggctttaaacgggccccacaagtgggcggtgaga 390  Q
     |||| |||||||  | || |||||||  |||||| ||||||| ||||||||    
T  38784278 catactaaactttaatttgactttaaataggccccgcaagtggacggtgaga 38784227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 384
Target Start/End: Complemental strand, 10582136 - 10582043
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccc-cacaagtgggcg 384  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||| ||||||||||||||| | ||||||||||    
T  10582136 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctagctttaaacgggccctcgcaagtgggcg 10582043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 35797532 - 35797586
Alignment:
Q  311 ctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaa 365  Q
    ||||||||||||||| |||||||||||  ||||||||||||| | ||||||||||    
T  35797532 ctctggtgtcaattttggtgggcaagttcatacaaaactttggtttggctttaaa 35797586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 4567581 - 4567486
Alignment:
Q  294 gtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    |||| |||||| ||| ||||||||| |||||||||||||| || || ||||| | | ||| ||||||||||||||||  ||||||||||||||||||    
T  4567581 gtctcaggttcgatttcctctggtgccaatttcggtgggctaaatccatacagagc-ttgttctggctttaaacggggcccccacaagtgggcggtg 4567486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 9641095 - 9641148
Alignment:
Q  314 tggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacg 367  Q
    |||| ||||||| |||||| ||||| ||||||||||||||| ||||||||||||    
T  9641095 tggtatcaattttggtgggtaagtccatacaaaactttgctttggctttaaacg 9641148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 41329951 - 41330039
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||||||||||||||| |||  ||||||||||||||||||||| | || |  ||  |||||||||| |||||| |||||| ||||||||    
T  41329951 ttgctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 44976300 - 44976202
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtg 387  Q
    |||||| |||||| ||| ||||||||| |||||| ||||||| ||||| ||||| |  |||||||||||||||||||||   |||| |||||||||||||    
T  44976300 aggtctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagag-tttgctctggctttaaacggggctccccgcaagtgggcggtg 44976202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 387
Target Start/End: Complemental strand, 36390715 - 36390617
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||| |||||| ||| ||||||||| |||||||||||| | ||||| ||||||| | |||||||| ||||||| |||  |||| |||||||||||||    
T  36390715 aaggtctcaggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagc-ttgctctgactttaaatgggacccccgcaagtgggcggtg 36390617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 437
Target Start/End: Original strand, 28668946 - 28669071
Alignment:
Q  314 tggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtc 410  Q
    ||||| |||||||||||| | ||||| ||||| | ||| ||| ||||||||||||||  |||||||||||||||||| || | || |  ||| |||||||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagctt-gctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtc 28669044  T
Q  411 ggtccttggatcggatatcgagttttc 437  Q
    | |  |||||||||||| |||||||||    
T  28669045 gatttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 437
Target Start/End: Original strand, 8259010 - 8259095
Alignment:
Q  354 tctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    ||||||||||| ||||  |||| ||||| ||||||| || |||||| |||| |||||||| | |||||||||||||  ||||||||    
T  8259010 tctggctttaatcggggcccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatactgagttttc 8259095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 437
Target Start/End: Original strand, 14486961 - 14487023
Alignment:
Q  375 caagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    ||||||||||||| || | || |  ||| |||||||||||||||||||||||| |||||||||    
T  14486961 caagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 379
Target Start/End: Original strand, 14946824 - 14946918
Alignment:
Q  286 ctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccccacaagt 379  Q
    |||| ||||| |||||||| |||  |||||||||||||||| |||||| ||||| ||||  | || |||||| ||||||||||| |||| |||||    
T  14946824 ctctcaaggttttaggttcgattttctctggtgtcaatttcagtgggctaagtccatacggagctatgctctagctttaaacggaccccccaagt 14946918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 25293165 - 25293258
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc 333  Q
    ||||| |||||||||||||  ||| || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| ||||||||||||||    
T  25293165 atttgaggttggtctagtggttgacttgggatcttggagtttgctc-ctcgagaggtctcaggttcgattccctctggtgccaatttcggtgggc 25293258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 27290639 - 27290720
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggcccc 373  Q
    |||||| |||||| ||| |||  |||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||||||    
T  27290639 aggtctcaggttcgattcccttcggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccc 27290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 34516530 - 34516413
Alignment:
Q  321 aatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggcccc-acaagtgggcggtgagactagttctttcgaattagtcggtccttg 418  Q
    ||||||||||||| ||||| ||||| | ||| ||||| ||||||||||||||||  ||||||||||||| || | || |  ||| |||||||| | ||||    
T  34516530 aatttcggtgggctaagtccatacagagctt-gctctcgctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34516432  T
Q  419 gatcggatatcgagttttc 437  Q
    ||||||||| | |||||||    
T  34516431 gatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Complemental strand, 28194170 - 28194137
Alignment:
Q  404 attagtcggtccttggatcggatatcgagttttc 437  Q
    |||||||||||||||||||||||| |||||||||    
T  28194170 attagtcggtccttggatcggataccgagttttc 28194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 31778140 - 31778228
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||||||||||||||| |||  |||| ||||||| |||||||| | || || ||  ||||||| || ||||||||||||| ||||||||    
T  31778140 ttgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 19525549 - 19525489
Alignment:
Q  285 tctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaa 345  Q
    ||||| ||| ||| |||||| ||| ||||||||| |||||| |||||||||||| ||||||    
T  19525549 tctctcaagatctcaggttcgattccctctggtgccaattttggtgggcaagtccatacaa 19525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 40591215 - 40591286
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctataca 344  Q
    ||||||||||||| |||| || |||| |||||  ||| | ||||||| ||||||||||||||||||| |||||    
T  40591215 ttggagtgtgctc-ctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggcaagtccataca 40591286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 40133647 - 40133448
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  40133647 atttggggttggcctagtggttggcttgggattttggagtttgctc-ctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagt 40133549  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | || |  |||||||||||| | ||||||||||||| |||||||    
T  40133548 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttt 40133450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 48977387 - 48977586
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||| || |||| ||||||| ||||| |||  ||||||| |||||| ||| | ||||||| |||||||||||||  ||||    
T  48977387 atttggggttggcctagtggttgacttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagt 48977485  T
Q  338 ctatacaaaactttgctctggctttaaacgggcccca--caagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| |||||||||||||||||| |||   ||||||||||||| || | || |  ||| |||||||||||||||||||||||| |||||||    
T  48977486 ccatacagagctt-gctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 48977584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 25289912 - 25289714
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||| ||| |||||||||||||| ||||    
T  25289912 atttggggttggtctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagt 25289814  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | | ||  |||||||||||| | ||||||||||||| |||||||    
T  25289813 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtggga-ttggtccctcgaattagtcgattcttggatcggataccgagttt 25289716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 1178244 - 1178368
Alignment:
Q  313 ctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaa-cgggccccacaagtgggcggtgagactagttctttcgaattagtcg 411  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||| |||||||||| || | | ||  ||| ||||||||    
T  1178244 ctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggggccccacacgtgggcggtggga-ttggtccctcggattagtcg 1178342  T
Q  412 gtccttggatcggatatcgagttttc 437  Q
       ||||||||||||| |||||||||    
T  1178343 aatcttggatcggataccgagttttc 1178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 436
Target Start/End: Original strand, 21362942 - 21363140
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||| || |||| ||||||| ||||| |||   |||||| |||||| ||| |||||||||||||||||||| ||| ||||    
T  21362942 atttggggttggcctagtggttgacttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgtcaatttcggtaggctaagt 21363040  T
Q  338 ctatacaaaactttgctctggctttaaacg--ggccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||  | |||| ||||||||||||| || | ||||  ||| |||| ||| | ||||||||||||| |||||||    
T  21363041 ccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagttt 21363139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 292 - 436
Target Start/End: Complemental strand, 49258408 - 49258262
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||| ||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  ||||||||||||||||||     
T  49258408 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccacaagtgggcggtgg 49258310  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || |  ||| |||||||| | ||||||||||||| ||||||||    
T  49258309 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 413
Target Start/End: Original strand, 50582991 - 50583165
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  || ||| |||| ||||||| ||||| |||||||||| | |||||| ||| |||||| || |||||||| |||| |||||    
T  50582991 atttggggttggcctagtggttggtttgggatcttggagtttgctc-ctcttaaggtttcaggttcgatttcctctgttgccaatttcgttgggtaagtc 50583089  T
Q  339 tatacaaaactttgctctggctttaaacgg-gccccacaagtgggcggtgagactagttctttcgaattagtcggt 413  Q
     ||||||||||||| | || ||||||| || |||||  ||||| |||||| || | || || ||||||||||||||    
T  50583090 catacaaaactttgatttgactttaaatggagccccgtaagtgagcggtgggattggtcctctcgaattagtcggt 50583165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 31538036 - 31537838
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  ||||||| ||||||| ||||| |||   |||||| | |||  ||| ||||||||| |||||| ||||||| ||||    
T  31538036 atttggggttggcctagtggttggcttaggatcttggagtttgctc-ctccagaggtctcatgtttgattccctctggtgccaattttggtgggctaagt 31537938  T
Q  338 ctatacaaaactttgctctggctttaaacgg-gcccca-caagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    ||||||| | |||  |||||||||||||||| |||||  |||||||||||||||| | || |  |||||||||||  | |||||||||||||||||||||    
T  31537937 ctatacagagctta-ctctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagttt 31537839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 15566645 - 15566499
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgag 389  Q
    |||||| |||||| ||| ||||| ||| |||||||||||||| ||||| ||||| | ||| |||||||||||||||||| |||| ||||||||||||| |    
T  15566645 aggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtggg 15566547  T
Q  390 actagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    | | || |  ||  |||||||| | ||||||||||||| |||||||||    
T  15566546 attggtcccctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 52821833 - 52821636
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||| ||||| ||||||  ||| || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| ||||||||||| || ||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgagctaagt 52821735  T
Q  338 ctatacaaaactttgctctggctttaaac-gggccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    | ||||| | | ||||||||||||||||| |||||||  |||||||||||| || | || |  ||| |||||||| | ||||||||||||| ||||||||    
T  52821734 ccatacagagc-ttgctctggctttaaacggggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 8456296 - 8456149
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| ||||||||| |||     
T  8456296 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcagtgg 8456198  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | |||| |||||||| |||||||||    
T  8456197 gattggtcccctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 32151533 - 32151621
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    ||||||||||||||||||||  |||| |||||||||||||||| | || |  |||||||||||| | ||||||||||||| ||||||||    
T  32151533 ttgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 436
Target Start/End: Original strand, 35492910 - 35493108
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  35492910 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 35493008  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||| | ||| |||||||    
T  35493009 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagttt 35493107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 30807351 - 30807152
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  30807351 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 30807253  T
Q  338 ctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    | ||||| | | ||||||||||||||||||||   |||| |||||||||||| ||  | | ||  ||| |||||||| | ||||||||||||| ||||||    
T  30807252 ccatacagagc-ttgctctggctttaaacggggccccccgcaagtgggcggt-aggattggtccctcggattagtcgattcttggatcggataccgagtt 30807155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 435
Target Start/End: Original strand, 48104986 - 48105073
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| | || | |||| |||||||| | ||||||||||||| |||||||    
T  48104986 ttgctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 53424374 - 53424176
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||| ||||| |||||||||||||| ||||    
T  53424374 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 53424276  T
Q  338 ctatacaaaactttgctctggctttaaacgggcccca-caagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    | ||||| |  |||||| ||||||||||||||||||  |||||| |||||| || | || |  ||| |||||||| | ||||||||||||| ||||||||    
T  53424275 ccatacagag-tttgctatggctttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 10083947 - 10083818
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaatt 406  Q
    ||||| ||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||||||||||| ||||| || | || |  ||| |||    
T  10083947 cctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggatt 10083849  T
Q  407 agtcggtccttggatcggatatcgagttttc 437  Q
    ||||| | ||||||||||||| |||||||||    
T  10083848 agtcgattcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 46576347 - 46576546
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| ||||||| |||||| ||||    
T  46576347 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagt 46576445  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||||||  |||| ||||||||||||  || | || |  | | |||||||| | ||||||||||||| |||||||    
T  46576446 ccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttt 46576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 436
Target Start/End: Complemental strand, 18177026 - 18176887
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| ||||||||| |||||||||||| | ||||| ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | ||    
T  18177026 aggttcgattccctctggtgccaatttcggtggactaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 18176928  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     |  ||| |||||||| | |||||||||||||  |||||||    
T  18176927 cccatcggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 26174164 - 26174311
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtggg-caagtctatacaaaactttgctctggctttaa--acgggccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||  ||||| ||||| | | |||||||||||||||  | || |||| |||||||||||||     
T  26174164 aggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagc-ttgctctggctttaaatagggcccccgcaagtgggcggtgg 26174262  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  26174263 gattggtcccctcggattagtcgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 1242042 - 1242121
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaac-gggccccacaagtgggcggtg 387  Q
    ||||||||| |||||| ||||||| ||||| ||||| | ||||||||||||||||||| ||| ||| |||||||||||||    
T  1242042 cctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtg 1242121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 427
Target Start/End: Complemental strand, 4252594 - 4252405
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  ||  ||  ||| ||||||||||||| |||| ||||||| | |||  ||| ||||||||| ||||||| |||  ||||||    
T  4252594 atttggggttggcctagtggttggcttgagatcttggagtgtgctc-ctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatcaagtc 4252496  T
Q  339 tatacaaaactttgctctggctttaaacgggcccc--acaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggata 427  Q
     ||||||| |||| |||||| ||  ||||| ||||  |||||||| ||||| || | || |  ||| |||||||| |||||||||||||||    
T  4252495 catacaaagctttactctggtttagaacggcccccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggata 4252405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 10190870 - 10190741
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaatt 406  Q
    ||||| ||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||| ||||||| ||||| || | || |  ||| |||    
T  10190870 cctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggatt 10190772  T
Q  407 agtcggtccttggatcggatatcgagttttc 437  Q
    ||||| | ||||||||||||| |||||||||    
T  10190771 agtcgattcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 383
Target Start/End: Original strand, 26108343 - 26108436
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggc 383  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| |||||||||    
T  26108343 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggc 26108436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 382
Target Start/End: Original strand, 40940824 - 40940968
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||| | ||||    
T  40940824 atttggggttggtctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtggactaagt 40940922  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtggg 382  Q
    | ||||| | | |||||||| |||||||||||  |||||||||||||    
T  40940923 ccatacagagc-ttgctctgactttaaacggggcccccacaagtggg 40940968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 45529952 - 45529754
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||| | |||||||| ||||| ||||    
T  45529952 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggagccaatttcgatgggctaagt 45529854  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||| ||||||||| |||||||    
T  45529853 ccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttt 45529756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 437
Target Start/End: Complemental strand, 8097366 - 8097278
Alignment:
Q  351 tgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    |||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  8097366 tgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 31766726 - 31766794
Alignment:
Q  275 gagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctataca 344  Q
    |||||||||| |||||||||||| |||||| ||| |||||| ||||||||||||||| ||  ||||||||    
T  31766726 gagtgtgctc-ctcttaaggtctcaggttcgatttcctctgatgtcaatttcggtggacagatctataca 31766794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 33398556 - 33398468
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    ||||||| ||||||||||||  |||| ||||||||||||| || | ||||  |||||||||||| | ||||||||||||| ||| ||||    
T  33398556 ttgctctagctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 39041979 - 39041852
Alignment:
Q  311 ctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaatta 407  Q
    |||||||| |||||||||||||| ||||| || || | ||| ||||||||||||||||||  |||| |||||||| |||| || | || |  ||| ||||    
T  39041979 ctctggtgccaatttcggtgggctaagtccatgcagagctt-gctctggctttaaacggggcccccgcaagtgggtggtgggattggtccactcggatta 39041881  T
Q  408 gtcggtccttggatcggatatcgagtttt 436  Q
    |||| | ||||||||||||| ||||||||    
T  39041880 gtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 53863904 - 53863845
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtggg 332  Q
    ||||||||||||| |||| ||||||||||||||||||  |||||||| |||||||| ||||    
T  53863904 ttggagtgtgctc-ctctcaaggtcttaggttcaattctctctggtgccaatttcgttggg 53863845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Complemental strand, 8958183 - 8958109
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaa 365  Q
    ||||||||| |||| ||| |||||||||||||||| ||||||| ||||| ||||||| | ||||||| ||||||||    
T  8958183 aaggtcttatgttcgatttcctctggtgtcaattttggtgggctaagtccatacaaagc-ttgctctagctttaaa 8958109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 357
Target Start/End: Complemental strand, 33418021 - 33417904
Alignment:
Q  238 tatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagt 337  Q
    |||||||||||| |||||||  || |||  ||| || ||||||| | || |||||||||| | ||||||||  ||||| || | ||||||| || |||||    
T  33418021 tatttggggttgatctagtggttggtttgagattttagagtgtgttttc-cttaaggtctcaagttcaattctctctgatgccgatttcgg-ggacaagt 33417924  T
Q  338 ctatacaaaactttgctctg 357  Q
    ||||||||||||||||||||    
T  33417923 ctatacaaaactttgctctg 33417904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 45272544 - 45272415
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaatt 406  Q
    ||||||||| |||||||||||||| ||||| ||||  | ||| ||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||    
T  45272544 cctctggtgccaatttcggtgggctaagtccatacggagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggatt 45272446  T
Q  407 agtcggtccttggatcggatatcgagttttc 437  Q
    ||| |   ||||||||||||| |||||||||    
T  45272445 agttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 437
Target Start/End: Complemental strand, 53234054 - 53233910
Alignment:
Q  294 gtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgaga 390  Q
    |||| |||||| |||  |||||||| |||||||||||||| ||||| ||||| | | ||||||||||| ||||||||  |||| ||||||||||||| ||    
T  53234054 gtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctctaaacggggcccccgcaagtgggcggtggga 53233956  T
Q  391 ctagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     | || |  ||| |||||||| | ||| ||||||||| |||||||||    
T  53233955 ttggtcccctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 424
Target Start/End: Complemental strand, 53288859 - 53288725
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaac-gggccccacaagtgggcggtga 388  Q
    ||||||| ||| || ||| ||||||||| |||||||||||| | ||||| ||||||| | ||||| ||||||||||| ||||||| |||  || ||||||    
T  53288859 aaggtctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagc-ttgctttggctttaaacggggccccgcaaacggacggtga 53288761  T
Q  389 gactagttctttcgaattagtcggtccttggatcgg 424  Q
    || |||| |  |||||||||||| |  |||||||||    
T  53288760 gattagtcccctcgaattagtcgattattggatcgg 53288725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 30257623 - 30257822
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||| ||||| |||||||| ||| | ||||    
T  30257623 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagt 30257721  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| |||||||||||||| |||  |||| |||||||||||||  | | || |  ||| |||||||| | ||||||||||||| ||| |||    
T  30257722 ccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaattt 30257820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 387
Target Start/End: Original strand, 1692909 - 1692981
Alignment:
Q  316 gtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaac-gggccccacaagtgggcggtg 387  Q
    |||||||||||||||| | ||||||||||| ||| |||||||||||||| || || |||| |||||||||||||    
T  1692909 gtgtcaatttcggtggactaagtctatacagaac-ttgctctggctttagacaggcccccgcaagtgggcggtg 1692981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 24407331 - 24407458
Alignment:
Q  311 ctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccc--cacaagtgggcggtgagactagttctttcgaatta 407  Q
    ||||||||  ||||||||||||  |||| |||||| || ||||||||| ||||||||||| ||  | ||||||||||||| || | || |  ||| ||||    
T  24407331 ctctggtgctaatttcggtgggttaagtatatacagaa-tttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctcggatta 24407429  T
Q  408 gtcggtccttggatcggatatcgagtttt 436  Q
    |||| | ||||||||||||| ||||||||    
T  24407430 gtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 34492773 - 34492575
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| | |||| ||| |||||| || |||||||| ||||| ||||    
T  34492773 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcatgttcgattccctctgctgccaatttcgttgggctaagt 34492675  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||||||  |||| ||||||||||||| || | || | |||  |||||| | | |||||||| |||| |||||||    
T  34492674 ccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagttt 34492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 373
Target Start/End: Original strand, 34844410 - 34844510
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgggcc 371  Q
    ||||||||||||| |||| ||||||| |||||| ||| ||||  | | |||||||||||| | |||  ||||| | ||||||| |||||||||| |||||    
T  34844410 ttggagtgtgctc-ctctcaaggtctcaggttcgattccctccagagccaatttcggtggactagtacatacagagctttgctatggctttaaatgggcc 34844508  T
Q  372 cc 373  Q
    ||    
T  34844509 cc 34844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 427
Target Start/End: Original strand, 25379760 - 25379949
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| | ||| ||| ||||||||| |||| ||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagt 25379858  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggata 427  Q
    | ||||| | ||| ||||||||||||||||||  |||| |||| |||||||| || | || |  ||| |||||||| | |||||||||||||    
T  25379859 ccatacagagctt-gctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggata 25379949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 26158850 - 26158921
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctataca 344  Q
    ||||||||||||| |||| ||||||| |||||  ||| ||| ||||| ||||||||||||| ||||| |||||    
T  26158850 ttggagtgtgctc-ctctcaaggtctcaggtttcattccctttggtgccaatttcggtgggtaagtccataca 26158921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 437
Target Start/End: Original strand, 24018384 - 24018585
Alignment:
Q  238 tatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aag 336  Q
    |||||||||||| |||||||  ||| || |||| ||||||| ||||| |||  ||||||| |||||| ||| |||||  |||||||||| |||||| |||    
T  24018384 tatttggggttgatctagtggttgacttgggatcttggagtttgctc-ctccaaaggtctgaggttcgatttcctctaatgtcaatttcagtgggctaag 24018482  T
Q  337 tctatacaaaactttgctctggctttaaacgggcc---ccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagt 433  Q
    || ||||| | ||| ||||||||||||||||||||   ||||||||||||||||||| | || |  | |||||||||||| |||||| ||||||||||||    
T  24018483 tccatacagagctt-gctctggctttaaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttcttggaccggatatcgagt 24018581  T
Q  434 tttc 437  Q
    ||||    
T  24018582 tttc 24018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 4718700 - 4718847
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| |||||||||||||     
T  4718700 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 4718798  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  4718799 gattggtcccctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 239 - 435
Target Start/End: Complemental strand, 15259604 - 15259407
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  || ||| |||| ||||| | ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  15259604 atttggggttggtctagtggttggtttgggatcttggattttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 15259506  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| |||||||||||||  | | || |  |||||||||||| | ||||||||||||  |||||||    
T  15259505 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 291 - 436
Target Start/End: Original strand, 18128567 - 18128714
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||||||| ||| |||  |||||||| |||||||||||||| | || ||| | | ||||||||||||||||||||||  |||| |||||||||||||     
T  18128567 aaggtcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggtgg 18128666  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || || ||  |||||||||| ||||||||| ||| ||||||||    
T  18128667 gattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 436
Target Start/End: Complemental strand, 264538 - 264400
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagtt 396  Q
    |||||| ||| ||||| ||| |||||||||||||| ||||||||||| | ||| |||||||||||||||||| |||||||| |||||||||||| |  |     
T  264538 aggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatc 264440  T
Q  397 ctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |  |||||||||||| | ||||||||||||| ||| ||||    
T  264439 ccctcgaattagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 651383 - 651521
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagtt 396  Q
    |||||| ||| ||||| ||| |||||||||||||| ||||||||||| | ||| |||||||||||||||||| |||||||| |||||||||||| |  |     
T  651383 aggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatc 651481  T
Q  397 ctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |  |||||||||||| | ||||||||||||| ||| ||||    
T  651482 ccctcgaattagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 837118 - 837256
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagtt 396  Q
    |||||| ||| ||||| ||| |||||||||||||| ||||||||||| | ||| |||||||||||||||||| |||||||| |||||||||||| |  |     
T  837118 aggttcgattccctctagtgccaatttcggtgggctaagtctatacatagctt-gctctggctttaaacgggcccccacaaatgggcggtgagattgatc 837216  T
Q  397 ctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |  |||||||||||| | ||||||||||||| ||| ||||    
T  837217 ccctcgaattagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 34694774 - 34694574
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||||||||||  ||| ||  ||| ||||||| ||||| |||| |||||||||||||| ||| | ||||||| |||||||||||||||| |     
T  34694774 atttggggttggtctagtggttgacttgtgatcttggagtttgctc-ctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggcaaatt 34694676  T
Q  339 tatacaaaactttgctctggctttaaacgg---gccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
     ||||||| |||||||| |||||  |||||    |||| | ||||| ||||| || | || |  ||  ||||||| |||||||||||||||| |||||||    
T  34694675 catacaaagctttgctccggcttagaacggaatccccctctagtggacggtgggattggtcccctcagattagtctgtccttggatcggataacgagttt 34694576  T
Q  436 tc 437  Q
    ||    
T  34694575 tc 34694574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 3734821 - 3734622
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  3734821 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 3734723  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||| ||||| ||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  3734722 ccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 3734624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 20305962 - 20306110
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||| || ||| ||| | ||||||| |||||||| ||||| ||||| ||||| | ||| ||||||||||||||||||  |||| |||||||||||||    
T  20305962 aaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtg 20306060  T
Q  388 agactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     || | || |  |||||||||||| ||||||||||||||| |||||||||    
T  20306061 ggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 20306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 21092595 - 21092743
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||| || ||| ||| | ||||||| |||||||| ||||| ||||| ||||| | ||| ||||||||||||||||||  |||| |||||||||||||    
T  21092595 aaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtg 21092693  T
Q  388 agactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     || | || |  |||||||||||| ||||||||||||||| |||||||||    
T  21092694 ggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 21092743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 435
Target Start/End: Original strand, 28193471 - 28193674
Alignment:
Q  233 taacttatttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtggg 332  Q
    |||| ||||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||    
T  28193471 taacctatttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtggg 28193569  T
Q  333 -caagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatc 429  Q
      ||||| ||||| | | ||||||||||||||||||||  ||| |||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |    
T  28193570 ttaagtccatacagagc-ttgctctggctttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 28193668  T
Q  430 gagttt 435  Q
    ||||||    
T  28193669 gagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 34237853 - 34237654
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  34237853 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 34237755  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| |||||| |||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  34237754 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 34237656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 3403649 - 3403549
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgggccccac--aagtgggcggtga 388  Q
    ||||||||| |||| ||| | ||||||| ||||||||||||||||||| ||||||||||||| | |||||||||| ||| ||| |  |||||||||||||    
T  3403649 aaggtcttatgttcgattccatctggtgccaatttcggtgggcaagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcggtga 3403550  T
Q  389 g 389  Q
    |    
T  3403549 g 3403549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 21239425 - 21239498
Alignment:
Q  313 ctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgggccccacaagtgggcggt 386  Q
    |||||| ||||||||||||||| ||| ||| ||||||||||| |||||||||| ||||||||||||||| ||||    
T  21239425 ctggtgccaatttcggtgggcatgtccatataaaactttgctttggctttaaatgggccccacaagtggacggt 21239498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 369
Target Start/End: Original strand, 28908824 - 28908955
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtctt--aggttcaattacctctggtgtcaatttcggtgggcaag 336  Q
    |||||| ||||||||||||  || ||| | || ||||||| ||||| |||| ||||| ||  |||||||||| ||||||||||||||| | |||||||||    
T  28908824 atttggagttggtctagtggttggtttggaattttggagtttgctc-ctctcaaggtgtttcaggttcaattccctctggtgtcaattacagtgggcaag 28908922  T
Q  337 tctatacaaaactttgctctggctttaaacggg 369  Q
    || ||||| | ||||| ||||||||||||||||    
T  28908923 tccatacagagctttgttctggctttaaacggg 28908955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 373
Target Start/End: Original strand, 41070767 - 41070897
Alignment:
Q  242 tggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctat 341  Q
    ||||||||| ||||||  ||| || |||| ||||||||||||  |||| ||||||| | |||| ||| ||| ||||||||||||||||||||||||  ||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgcta-ctctcaaggtctcaagttcgattccctttggtgtcaatttcggtgggcaagttcat 41070865  T
Q  342 acaaaactttgctctggctttaaacgggcccc 373  Q
    ||| | |||| |||||||||  ||||||||||    
T  41070866 acatagctttactctggcttagaacgggcccc 41070897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 34639404 - 34639208
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||| ||||||||  ||  || |||| ||||||||||||| |||| ||||||| ||| || ||  ||||||||| ||||||||||||| |||||    
T  34639404 atttggggttagtctagtggttggcttgggatcttggagtgtgctc-ctctcaaggtctcaggctcgatc-cctctggtgccaatttcggtgggtaagtc 34639307  T
Q  339 tatacaaaactttgctctggctttaaacgggcc-ccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     ||||| | ||||||||||||||  |||||||| |  ||||||| ||||  || | || | ||||||||| |||||||||| || ||||| | ||||||    
T  34639306 catacagagctttgctctggcttagaacgggcctctgcaagtggacggtaggattggtcccttcgaattaatcggtccttgaattggataccaagtttt 34639208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 382
Target Start/End: Complemental strand, 27746533 - 27746390
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  || ||| |||| ||||||| ||||| |||  ||||||| |||||| ||| ||| ||||| |||||||||||||| ||||    
T  27746533 atttggggttggcctagtggttggtttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggctaagt 27746435  T
Q  338 ctatacaaaactttgctctggcttt-aaacgggccccacaagtggg 382  Q
    | ||||| | | ||||||||||||| ||| ||||||||||||||||    
T  27746434 ccatacagagc-ttgctctggctttaaaaggggccccacaagtggg 27746390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 39349311 - 39349458
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| |||||||||||||     
T  39349311 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 39349409  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || |  | |  ||| |||||||| | ||||||||||||| | |||||||    
T  39349410 gattgatcccctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 21603285 - 21603431
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||| ||||| |||||||||||||| ||| | ||||| | | ||||||||||||||||||||  |||| |||||||||||||     
T  21603285 aggtctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 21603383  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || |  ||| |||||||| | ||||||||||||| ||||||||    
T  21603384 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 434
Target Start/End: Complemental strand, 24339776 - 24339625
Alignment:
Q  285 tctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccccacaagtggg 382  Q
    ||||| |||||||||||||| |||  |||| ||  ||||||||||||  ||||  ||||||| ||||||| ||||||||||||||  | ||| |||||||    
T  24339776 tctctcaaggtcttaggttcgattttctcttgtaccaatttcggtggataagttcatacaaagctttgctttggctttaaacggggtctccataagtggg 24339677  T
Q  383 cggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    ||||  || | ||||| ||| |||| ||||||||| ||| ||||| ||||||    
T  24339676 cggtaggatttgttctctcgtattaatcggtccttagattggataccgagtt 24339625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 42328077 - 42328206
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaatt 406  Q
    |||||| || |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||||||||||| || || || | || |  |||||||    
T  42328077 cctctgttgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaatt 42328175  T
Q  407 agtcggtccttggatcggatatcgagttttc 437  Q
    ||||| | ||||||||||||| |||||||||    
T  42328176 agtcgattcttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 2618189 - 2618388
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   ||||||| ||||| ||| ||||||||| ||||||| |||||| ||||    
T  2618189 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtcttgggttcgattccctctggtgccaatttcagtgggctaagt 2618287  T
Q  338 ctatacaaaactttgctctggctttaaacg--ggccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| ||||||||||||||||  | |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||  |||||||    
T  2618288 ccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttt 2618386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 437
Target Start/End: Complemental strand, 8765665 - 8765525
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggcc--ccacaagtgggcggtgagactagt 395  Q
    |||||| ||| ||||||||| |||||||| ||||| ||||| ||||| | ||| |||||||||||||||||| |  || ||||||||||||| || | ||    
T  8765665 aggttcgattccctctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacggggctcccgcaagtgggcggtgggattggt 8765567  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     |  ||| |||||||| | ||||||||||||| |||||||||    
T  8765566 cccctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 32879282 - 32879481
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||| || |||| || |||| || || |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  32879282 atttggggttggtctagtggttgacttgggatcttcgagtttggtc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 32879380  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
      ||||| | | |||||||| | |||||||||  |||||||||||||||||| || | || |  ||| |||||||| | ||||||| ||||| |||||||    
T  32879381 tcatacagagc-ttgctctgacattaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttt 32879479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 14633009 - 14633156
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggcc--ccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||||||||| | | ||||||||||||| |||||  |  ||||||||||||||||     
T  14633009 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgctctggctttgaacggagcgtccacaagtgggcggtgg 14633107  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  | | |||||||| | ||||||||||||| | |||||||    
T  14633108 gattggtccccttggattagtcgattcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 19471612 - 19471812
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||  ||| ||||||||| |||||| |||| || ||||    
T  19471612 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagt 19471710  T
Q  338 ctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    | ||||| | ||| ||||||||||||||||||   |||| |||||||||| || || | || |  |||||||||||| | ||||||||||||| ||||||    
T  19471711 ccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtt 19471809  T
Q  435 ttc 437  Q
    |||    
T  19471810 ttc 19471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 19542536 - 19542736
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||  ||| ||||||||| |||||| |||| || ||||    
T  19542536 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagt 19542634  T
Q  338 ctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    | ||||| | ||| ||||||||||||||||||   |||| |||||||||| || || | || |  |||||||||||| | ||||||||||||| ||||||    
T  19542635 ccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtt 19542733  T
Q  435 ttc 437  Q
    |||    
T  19542734 ttc 19542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 19590160 - 19589960
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||  ||| ||||||||| |||||| |||| || ||||    
T  19590160 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggtttgattccctctggtgccaattttggtgagctaagt 19590062  T
Q  338 ctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    | ||||| | ||| ||||||||||||||||||   |||| |||||||||| || || | || |  |||||||||||| | ||||||||||||| ||||||    
T  19590061 ccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtt 19589963  T
Q  435 ttc 437  Q
    |||    
T  19589962 ttc 19589960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 437
Target Start/End: Complemental strand, 2639500 - 2639410
Alignment:
Q  349 tttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    |||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  2639500 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 436
Target Start/End: Complemental strand, 6953160 - 6953008
Alignment:
Q  285 tctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaac--gggccccacaagtgg 381  Q
    ||||| ||||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | |||||||||||||||||  || |||| ||||| |    
T  6953160 tctctaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagttg 6953062  T
Q  382 gcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||||| || | | ||  ||| |||||||| | ||||||||| ||| ||||||||    
T  6953061 gcggtggga-ttggtccctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 390
Target Start/End: Original strand, 18532110 - 18532262
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| |||| | ||||||||||||||||| ||||    
T  18532110 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctcagatgtcaatttcggtgggctaagt 18532208  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgaga 390  Q
    | ||||| ||| ||||||||| ||||||||||  |||  ||||||||||||||||    
T  18532209 ccatacagaac-ttgctctggatttaaacggggcccctgcaagtgggcggtgaga 18532262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 30482612 - 30482683
Alignment:
Q  311 ctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgggccccacaagtggg 382  Q
    ||||| |||||| || |||||| || || ||||| ||||| |||||| ||||||||||||||||||||||||    
T  30482612 ctctgatgtcaaatttggtgggtaaatccatacagaacttggctctgtctttaaacgggccccacaagtggg 30482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 437
Target Start/End: Complemental strand, 34610831 - 34610686
Alignment:
Q  294 gtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgggccc--cacaagtgggcggtgaga 390  Q
    |||| |||||| ||| |||||| || |||||||||||| | ||||||||||| | ||| |||||||||||||||| ||||  | ||||||||||||   |    
T  34610831 gtctgaggttcgattccctctgatgccaatttcggtggtctaagtctatacagagctt-gctctggctttaaacgagcccctcgcaagtgggcggtagaa 34610733  T
Q  391 ctagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     | || |  |||||||||||| | ||||||||||||| |||||||||    
T  34610732 ttggtcccctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 373
Target Start/End: Complemental strand, 1372563 - 1372466
Alignment:
Q  275 gagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgggcccc 373  Q
    |||||||||| |||||||||||| |||||| ||| |||||| ||||||||| | ||| || ||||||||| |  |||||| || ||| |||||||||||    
T  1372563 gagtgtgctc-ctcttaaggtctcaggttcgattccctctgatgtcaattttgatggacaggtctatacagagttttgctttgacttaaaacgggcccc 1372466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 4698869 - 4698793
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgg 368  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||| ||  | ||| |||||||||||||||||||    
T  4698869 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaac-ttgctctggctttaaacgg 4698793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 10292167 - 10292255
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    ||||||||||||||||||||  |||||||||||||||||| || | || | |||| |||||| | | ||||||||| ||| ||||||||    
T  10292167 ttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 436
Target Start/End: Original strand, 12312870 - 12313046
Alignment:
Q  260 tgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggc 359  Q
    |||||| |||| ||||||| |||||| ||| ||  ||| | |||| ||| ||||||||| |||||| | |||||||| | | ||||| ||||| | ||||    
T  12312870 tgatttgggatcttggagtttgctct-tctcaaaatctcaagttcgatttcctctggtgccaattttgatgggcaaggccacacaaagctttgatttggc 12312968  T
Q  360 tttaaacgggcccc-acaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||||| ||||||| |||||||||||||| || |  | |  |||||||||||||| ||| || |||| | ||||||||    
T  12312969 tttaaatgggcccccacaagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagtttt 12313046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 33121043 - 33121107
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctct 356  Q
    |||||||||||||||||| |||| |||| ||||||| || ||| |||||||||||| |||||||||    
T  33121043 aaggtcttaggttcaatt-cctccggtgccaatttcagtaggctagtctatacaaagctttgctct 33121107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 437
Target Start/End: Original strand, 33746944 - 33747084
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagtt 396  Q
    |||||| ||| ||||| |||| ||||||||||||||| |  ||| ||| ||||| ||||| ||  |||||   |||| ||||||| |||||  | | |||    
T  33746944 aggttcgattccctctagtgttaatttcggtgggcaaattcatataaagctttgttctggtttagaacggagcccccgcaagtggacggtggaattggtt 33747043  T
Q  397 ctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || ||| |||||||| ||||||||||||||| |||||||||    
T  33747044 ctctcggattagtcgatccttggatcggataccgagttttc 33747084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 42643316 - 42643118
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||| || |||| ||||||| ||||| |||   |||||| || ||| ||| ||||| ||| |||||||||||||| ||||    
T  42643316 atttggggttggcctagtggttgacttgggatcttggagtttgctc-ctccagaggtctcagattcgattccctctagtgccaatttcggtgggctaagt 42643218  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| |||||| ||| |||||||  |||| ||||||||||||| || | || |  ||| |||||| | | ||||||||||||| |||||||    
T  42643217 ccatacagagctt-gctctgtcttgaaacgggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagttt 42643119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 11956183 - 11956133
Alignment:
Q  311 ctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctt 361  Q
    ||||||||||||||||||||| |||||||| ||| | ||||||||| ||||    
T  11956183 ctctggtgtcaatttcggtggacaagtctacacagagctttgctctagctt 11956133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 23361691 - 23361625
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc 333  Q
    |||||| |||||||||||   || ||||||| ||||||||||  ||||||||||||||| |||||||    
T  23361691 ggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggc 23361625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 13749091 - 13749179
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctt 361  Q
    ||||||| ||||| |||| ||||| | |||||| ||| |||  |||| |||||| |||||||||||  ||||||| ||||||||||||||    
T  13749091 ttggagtctgctc-ctctcaaggtttcaggttcgatttccttcggtgccaattttggtgggcaagttcatacaaagctttgctctggctt 13749179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 384
Target Start/End: Original strand, 28964036 - 28964182
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  || |||  ||| || |||| ||||| |||||||||| | | |||| ||| | ||||||| |||||||||||||| ||||    
T  28964036 atttggggttggtctagtggttggtttgagatcttagagtttgctc-ctcttaaggtttcatgttcgattccatctggtgccaatttcggtgggctaagt 28964134  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcg 384  Q
    | ||||  | || || ||||||||||||||||  |||| ||||||||||    
T  28964135 ccatacggagctatg-tctggctttaaacggggcccccgcaagtgggcg 28964182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 36094733 - 36094793
Alignment:
Q  286 ctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaa 346  Q
    |||| ||||||| |||||| ||| |||||||| ||||||||||| | |||||| |||||||    
T  36094733 ctctcaaggtctcaggttcgattccctctggtatcaatttcggtagacaagtccatacaaa 36094793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 9843937 - 9844136
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||  || |||| ||||||| ||||| ||||  |||||| |||||| | | |||||||||||||||| ||||||  ||||    
T  9843937 atttggggttggtctagtggttggcttgggatcttggagtttgctc-ctctagaggtctcaggttcgacttcctctggtgtcaattttggtgggttaagt 9844035  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | ||| | ||||||||||||||||  |||| |||||||||||||||| | || | |||| |||||||| | |||||||||||||||||||||    
T  9844036 ccatacagagctt-gttctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttt 9844134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 387
Target Start/End: Original strand, 33499501 - 33499623
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttca-attacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaa 365  Q
    |||| ||||||| ||||| |||| ||||||| ||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||    
T  33499501 ggatcttggagtttgctc-ctctcaaggtctcaggttcagattccctctggtgtcaatttcggtgggctagtccatacaaatctttgctttggctttaaa 33499599  T
Q  366 cgggcc--ccacaagtgggcggtg 387  Q
     |||||  ||||||||||||||||    
T  33499600 tgggccctccacaagtgggcggtg 33499623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 434
Target Start/End: Original strand, 10377765 - 10377911
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg---ccccacaagtgggcggtg 387  Q
    ||||||| |||||||||| ||| ||||| ||||||||||||||||||| ||||| | |||||||||| ||| |||||||   ||||||||||||||||||    
T  10377765 aaggtctcaggttcaattccctatggtgccaatttcggtgggcaagtccatacatagctttgctctgacttaaaacggggccccccacaagtgggcggtg 10377864  T
Q  388 agactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
      | | || |  ||| | |||||||||||||||| ||||| ||||||    
T  10377865 gcattggtcccctcggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 15360296 - 15360097
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  15360296 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 15360198  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||| ||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  15360197 ccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 15360099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 292 - 436
Target Start/End: Complemental strand, 9690784 - 9690638
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    ||||||||||||| ||| | ||| |||||||||||||||||| ||||| ||||| | | ||||||||||||||||||||  || ||||||||| |||||     
T  9690784 aggtcttaggttcgatttcttctagtgtcaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggccctcacaagtggacggtgg 9690686  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || || ||| |||||||| | ||||||||||||| ||||||||    
T  9690685 gattggtcctctcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 3222781 - 3222635
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaac-gggccccacaagtgggcggtgag 389  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | |||||||| |||||||| ||||||| ||||||||||||| |    
T  3222781 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgtctttaaacggggccccgcaagtgggcggtggg 3222683  T
Q  390 actagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    | | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  3222682 attggtcccctcggattagtcgattcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 338
Target Start/End: Original strand, 8479311 - 8479409
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  ||| || |||| ||||||||||||| |||||||| | | |||||| ||| |||||||||||||||||||||||||||||    
T  8479311 atttggggttggcctagtggttgacttgggatcttggagtgtgctc-ctcttaagatttcaggttcgatttcctctggtgtcaatttcggtgggcaagtc 8479409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 387
Target Start/End: Original strand, 9208251 - 9208400
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    ||||||||||| |||||||  ||  || |||| ||||||| ||||| |||| ||||||| |||||| ||| || |||||| |||||||||||||||||||    
T  9208251 atttggggttgttctagtggttggattgggatcttggagtttgctc-ctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggcaagtc 9208349  T
Q  339 tatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
     ||||| | | ||||| |||||||||| |||  |||| |||||||||||||    
T  9208350 catacagagccttgctttggctttaaatggggcccccgcaagtgggcggtg 9208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 437
Target Start/End: Original strand, 34147399 - 34147544
Alignment:
Q  294 gtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgaga 390  Q
    |||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| ||||||||||||| ||    
T  34147399 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggccccccgcaagtgggcggtggga 34147497  T
Q  391 ctagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  34147498 ttggtcccctcggattagtcgattcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 437
Target Start/End: Original strand, 34160015 - 34160160
Alignment:
Q  294 gtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgaga 390  Q
    |||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| ||||||||||||| ||    
T  34160015 gtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggccccccgcaagtgggcggtggga 34160113  T
Q  391 ctagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     | || |  ||| |||||||| | ||||||||||||| |||||||||    
T  34160114 ttggtcccctcggattagtcgattcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 434
Target Start/End: Complemental strand, 17149626 - 17149458
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaac 366  Q
    |||| ||||||||||||| |||| ||||||| |||||| ||| |||||||||  ||||||||| |||||||| ||||| | | ||||| ||||||||||     
T  17149626 ggatcttggagtgtgctc-ctctcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaat 17149528  T
Q  367 ggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtt 434  Q
    |||  |||| ||||||  ||||| || | || |  ||||||||||||||||||| ||| |||| ||||||    
T  17149527 ggggcccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 654344 - 654146
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    ||||||| |||| |||||| |||| || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  654344 atttgggtttggcctagtggctgacttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 654246  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||   ||| ||||||||||||| || | || |  ||| |||||||| |  |||||||||||| |||||||    
T  654245 ccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttt 654147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 436
Target Start/End: Original strand, 28672066 - 28672264
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||| ||  ||| ||||||| ||||| ||||  ||||||||||||| ||| |||||||||||||||| ||||||| ||||    
T  28672066 atttggggttggcctagtggttgacttgagatcttggagtttgctc-ctctagaggtcttaggttcgattccctctggtgtcaattttggtgggctaagt 28672164  T
Q  338 ctatacaaaactttgctctggctttaaacgggccc--cacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||| | |||||||||||||||||  | ||||||||||||| || | || |  ||| |||||||| | |||||||| |||| |||||||    
T  28672165 ccatacagagc-ttgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttt 28672263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 11448922 - 11449068
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| |||  |||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||  |||| |||||||||||||     
T  11448922 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 11449020  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || |  ||| |||||||| | |||| |||||||||||||||||    
T  11449021 gattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 1344986 - 1345133
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| ||||||| |||||| ||||| ||||||| ||| ||||||||||||||||||  |||| ||||||| |||||     
T  1344986 aggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagctt-gctctggctttaaacgggccccccgcaagtggacggtgg 1345084  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  | | |||||||| | ||||||||||||| |||||||||    
T  1345085 gattggtccccttggattagtcgattcttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 427
Target Start/End: Complemental strand, 28742011 - 28741850
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaac 366  Q
    |||| ||||||||||||| |||| ||||||| |||||| |||   |||||||| ||||| |||||   |||| ||| | |||| ||||||||||| ||||    
T  28742011 ggatcttggagtgtgctc-ctctcaaggtctcaggttcgattcgttctggtgttaattttggtggatgagtccatatagaactctgctctggcttaaaac 28741913  T
Q  367 ggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggata 427  Q
    ||   |||||||| |||  |||| || | || || ||||||||||||||||||||||||||||    
T  28741912 ggaacccccacaaatggatggtgtgattggtcctctcgaattagtcggtccttggatcggata 28741850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 11840952 - 11841097
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgag 389  Q
    |||||| ||| || ||| ||||||||| |||||||||||||  ||||| ||||||| ||| ||| ||| |||||||||| ||||| |||||| ||||| |    
T  11840952 aggtctcaggctcgattccctctggtgccaatttcggtgggttaagtccatacaaagctt-gctttggttttaaacggggccccataagtggacggtggg 11841050  T
Q  390 actagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    | |||| |  |||||||||||| |  |||||||||||| ||||||||    
T  11841051 attagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 436
Target Start/End: Complemental strand, 5360217 - 5360071
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| |||||  || |||||||||||||| ||||| ||||| | ||| |||||| ||||||||||   ||||||||||||||||||     
T  5360217 aggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggaacccccacaagtgggcggtgg 5360119  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || |  |||||||||||| | ||| ||||||||| ||||||||    
T  5360118 gattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 387
Target Start/End: Original strand, 12390476 - 12390573
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaac--gggccccacaagtgggcggtg 387  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | |||||||||||||||||  || |||| |||||||||||||    
T  12390476 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtg 12390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 387
Target Start/End: Original strand, 11007164 - 11007313
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    ||||||||||| |||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| |||  ||||| | ||||||||||||||| ||||    
T  11007164 atttggggttgatctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggctaagt 11007262  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    | ||||||| | ||||||| ||||||| ||||  |||| |||||||||||||    
T  11007263 ccatacaaagc-ttgctctagctttaagcggggcccccgcaagtgggcggtg 11007313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 14504201 - 14504082
Alignment:
Q  319 tcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtcct 416  Q
    ||||||||| |||| ||||| |||||    |||||||||| |||||| |||  |||| ||||||||||||| || |  | || |||||||||||| ||||    
T  14504201 tcaatttcgatgggtaagtccatacagtgttttgctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatcct 14504102  T
Q  417 tggatcggatatcgagtttt 436  Q
    || |||||||| ||||||||    
T  14504101 tgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 369
Target Start/End: Original strand, 12591636 - 12591765
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||||| ||| ||||||| |||||| ||||    
T  12591636 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggctaagt 12591734  T
Q  338 ctatacaaaactttgctctggctttaaacggg 369  Q
    | ||||| | ||| ||||||||||||||||||    
T  12591735 ccatacagagctt-gctctggctttaaacggg 12591765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Complemental strand, 17081182 - 17081053
Alignment:
Q  310 cctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaatt 406  Q
    |||||||||||||||||||||||| ||||| ||||| | | |||||||| ||||||| |||  |||| ||||||||||||| || | || |  ||||||     
T  17081182 cctctggtgtcaatttcggtgggctaagtccatacagagc-ttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcgaata 17081084  T
Q  407 agtcggtccttggatcggatatcgagttttc 437  Q
    ||| | | ||||||||| ||| |||||||||    
T  17081083 agttgtttcttggatcgaataccgagttttc 17081053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 17225737 - 17225863
Alignment:
Q  311 ctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgagactagttctt-tcgaattag 408  Q
    |||||||| ||||||||| ||||||||| ||||| | ||||||||| | ||  |||||| |||| ||| ||||||||| || | | |||  ||  |||||    
T  17225737 ctctggtgccaatttcggcgggcaagtccatacagagctttgctctcgtttagaacggggccccgcaaatgggcggtgggatt-gatctcctcagattag 17225835  T
Q  409 tcggtccttggatcggatatcgagtttt 436  Q
    ||||||||| ||||||||||||||||||    
T  17225836 tcggtccttagatcggatatcgagtttt 17225863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 21148656 - 21148510
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgag 389  Q
    |||||| | |||| ||| ||||| ||| |||||||| ||||| ||||| ||||| | ||| |||||| ||||||||||| |||| ||||||||||||| |    
T  21148656 aggtctcaagttcgattccctctagtgccaatttcgatgggctaagtccatacagagctt-gctctgactttaaacggggccccgcaagtgggcggtggg 21148558  T
Q  390 actagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    | | || |  ||| |||||||| | |||| |||||||| |||||||||    
T  21148557 attggtcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 46607809 - 46608008
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||| || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  46607809 atttggggttggcctagtggttgacttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 46607907  T
Q  338 ctatacaaaactttgctctggctttaaacgg--gccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | |||||||| ||||||| ||   |||| ||||||||||||| || |  | |  ||| ||||||||||||||||||||||||||||||||    
T  46607908 ccatacagagc-ttgctctgactttaaaaggcccccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatatcgagttt 46608006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 15059548 - 15059401
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| |||  |||||||| |||||||||||||| ||||| ||||| | ||| ||||||||||||||||||  |||| ||||||||||||||    
T  15059548 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtga 15059450  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  |||||||||||| | ||||||||||||| |||||||||    
T  15059449 gattggtcccctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 436
Target Start/End: Complemental strand, 9500501 - 9500355
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| |||  |||||||| |||||||||||||| ||||| ||||| | ||| |||||||||||||||||   |||||||||||||||||||    
T  9500501 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggagcccccacaagtgggcggtga 9500403  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | ||   |||| |||||||| | ||||||||||||||||||||||    
T  9500402 gattggtctcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 4621435 - 4621236
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  4621435 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 4621337  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  4621336 ccatacagagc-ttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 4621238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 8254898 - 8254751
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| |||| ||||||||||||||||||||||| ||||  ||||| ||| ||||||||||||||||||||  |||| |||||||||||||     
T  8254898 aggtctcaggttcgattatctctggtgtcaatttcggtgggctaagttcatacagaac-ttgctctggctttaaacggggcccccgcaagtgggcggtgg 8254800  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || |  | |  | |||||||||| | |||| |||||||| |||||||||    
T  8254799 gattgatccccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 436
Target Start/End: Original strand, 24674392 - 24674590
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  24674392 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 24674490  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||| | ||||||||||||| ||| |||    
T  24674491 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaattt 24674589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 32729544 - 32729742
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  ||  || |||| || |||| ||||| |||| || |||| |||||| ||| ||| ||||| |||||||||||||||||||    
T  32729544 atttggggttggcctagtggttggcttgggatcttcgagtttgctc-ctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggcaagtc 32729642  T
Q  339 tatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     ||||| | | |||||||||||||||| |||  |||| ||||||||||||| || |  | |  | | ||||||||||| |||||||||||| ||||||||    
T  32729643 catacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagtttt 32729741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 436
Target Start/End: Original strand, 24122074 - 24122220
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||||||||||   ||| |||||||||||||     
T  24122074 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtgg 24122172  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    || | || |  ||| |||||||| | ||||||||||||| ||||||||    
T  24122173 gattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 435
Target Start/End: Complemental strand, 37351538 - 37351454
Alignment:
Q  352 gctctggctttaaacgggcccc-acaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    |||||||||||||||||||||| |||||||||||||| || | || |  ||| |||||||||||||||||||||||| |||||||    
T  37351538 gctctggctttaaacgggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 1378958 - 1379048
Alignment:
Q  301 gttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg-ccccacaagtgggcggtgaga 390  Q
    |||| ||| |||||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||| |||| ||||||| ||||||||    
T  1378958 gttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacgggcccccgcaagtggacggtgaga 1379048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 7197444 - 7197247
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| |||||| || ||||||||||||| |||||    
T  7197444 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctgatgccaatttcggtgggtaagtc 7197346  T
Q  339 tatacaaaactttgctctggctttaaacg-ggcccc-acaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     |||| | || |||||||||||||||||| ||||||  |||||||||||||||| | || |  ||| |||||||| | | ||||||||||| ||||||||    
T  7197345 aatac-agaccttgctctggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 423
Target Start/End: Original strand, 16899561 - 16899687
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagtt 396  Q
    |||||| ||| ||||||||| |||||||||||||| |||| ||||||| ||||||||||| ||  ||||||  |||  ||||||| |||||||| | ||     
T  16899561 aggttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctggtttagaacggggcccctgcaagtggacggtgagattggtc 16899660  T
Q  397 ctttcgaattagtcggtccttggatcg 423  Q
    |  ||| ||||||||||||||||||||    
T  16899661 ccctcggattagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 34965374 - 34965453
Alignment:
Q  286 ctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaa 365  Q
    |||||||||| | | |||| ||| ||||||||| |||||| |||| ||||||||||| ||||||||||||||||||||||    
T  34965374 ctcttaaggtttcatgttcgatttcctctggtgccaattttggtgagcaagtctatagaaaactttgctctggctttaaa 34965453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 7766873 - 7766726
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| |||||||||  ||||||||||||| ||||| ||||| | ||| |||||| |||||||||||  |||| |||||||||||||     
T  7766873 aggtctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaagtgggcggtgg 7766775  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | |||| ||||||||||||||||||    
T  7766774 gattggtcccctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 809267 - 809343
Alignment:
Q  286 ctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggcttt 362  Q
    |||||||||||| |||||  |||||| || ||||||||||||||||||||||| ||||||| | ||| |||||||||    
T  809267 ctcttaaggtctcaggtttgattacccctagtgtcaatttcggtgggcaagtccatacaaagccttgatctggcttt 809343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 355
Target Start/End: Original strand, 24216977 - 24217092
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||  ||||||  ||| || |||| ||||||||||||| |||| ||||||| |||||| ||||||| ||||| ||||||||||||| || ||    
T  24216977 atttggggttgacctagtggttgacttgggatcttggagtgtgctc-ctctcaaggtctcaggttcgattacctttggtgccaatttcggtgggtaaatc 24217075  T
Q  339 tatacaaaactttgctc 355  Q
     |||||||  |||||||    
T  24217076 catacaaagatttgctc 24217092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 427
Target Start/End: Original strand, 18646904 - 18647041
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacgg-gcccc-acaagtgggcggtga 388  Q
    |||||| |||||| |||  |||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||| |||||   |||||||||||||    
T  18646904 aggtctcaggttcgattctctctggtgccaatttcggtgggctaagtctatac-aaagtttgctctggctttaaacggagcccctgtaagtgggcggtga 18647002  T
Q  389 gactagttctttcgaattagtcggtccttggatcggata 427  Q
    || |  | |  |||||||||||| | |||| ||||||||    
T  18647003 gattgatcccctcgaattagtcgattcttgaatcggata 18647041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 30677226 - 30677374
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||| |||||  ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||| |||||||||| |||  |||| |||||||||||||    
T  30677226 aaggtctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctttggctttaaatgggacccccgcaagtgggcggtg 30677324  T
Q  388 agactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     || | || |  ||  |||||||||| |||||| ||||||||||||||||    
T  30677325 ggattggtcccctcagattagtcggttcttggaccggatatcgagttttc 30677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 435
Target Start/End: Original strand, 17935820 - 17935965
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| | ||| ||| |||||||||||||| ||||| ||||| |  |||||||||||||||||||||  |||| |||||||||| ||     
T  17935820 aggtctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagag-tttgctctggctttaaacggggcccccgcaagtgggcgatgg 17935918  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  17935919 gattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 357
Target Start/End: Complemental strand, 19034525 - 19034467
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctg 357  Q
    |||||| |||| |||||||| ||||||||||||||||||| ||||| | ||||||||||    
T  19034525 aggttcgattatctctggtgccaatttcggtgggcaagtccatacagagctttgctctg 19034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 25237159 - 25237070
Alignment:
Q  267 ggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctg 357  Q
    |||| ||||||| |||| ||||| ||||||| |||||| ||| ||||| ||| ||||||||||||||||||| ||||| |  |||||||||    
T  25237159 ggatcttggagtttgct-tctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctctg 25237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 357
Target Start/End: Original strand, 1138611 - 1138695
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctg 357  Q
    ||||||||||||| |||| |||||||||||||| | |  |||| ||| |||||||||||| |||||| ||||| | ||||||||||    
T  1138611 ttggagtgtgctc-ctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggacaagtccatacagagctttgctctg 1138695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 1486463 - 1486617
Alignment:
Q  286 ctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg----ccccacaagtgg 381  Q
    |||| ||||||| |||||| ||| ||| ||||| |||||||| |||| ||||| ||||| | |||||||||| |||  ||||||    |||| |||||||    
T  1486463 ctctcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctgacttagaacggggcccccccgcaagtgg 1486562  T
Q  382 gcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     ||||| ||   || |  ||  |||||||||||||||||||||||| ||||||||    
T  1486563 acggtgggatcggtcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 7578460 - 7578607
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||| ||||| |||||||||||||| ||||| ||||||| | |||||||| |||||||||||  || | |||||||| ||||     
T  7578460 aggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagc-ttgctctgactttaaacggggccctcgcaagtgggtggtgg 7578558  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | ||||  ||| |||||| | |  |||||||||||| |||||||||    
T  7578559 gattggttccctcggattagttgatttttggatcggataccgagttttc 7578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 7946895 - 7946994
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaa-cgggccccacaagtgggcggtgag 389  Q
    |||||| | |||| ||| ||||||||| |||||||||||||| ||||||||||| | | ||||||| ||||||||  ||||||| |||||||| ||||||    
T  7946895 aggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgctctcgctttaaatggggccccgcaagtgggtggtgag 7946993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 387
Target Start/End: Original strand, 8077646 - 8077795
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| |||  |||||||| |||||||||||||| ||||    
T  8077646 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagt 8077744  T
Q  338 ctatacaaaactttgctctggctttaaac--gggccccacaagtgggcggtg 387  Q
    | ||||| | | |||||||||||||||||  || |||| |||||||||||||    
T  8077745 ccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtg 8077795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 436
Target Start/End: Complemental strand, 9926272 - 9926146
Alignment:
Q  312 tctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacg--ggccccacaagtgggcggtgagactagttctttcgaattagt 409  Q
    |||||||||||||| ||||||||| || |||||||  |||||||||||||  ||||  | |||| ||| ||||||||| || |  | | ||   ||||||    
T  9926272 tctggtgtcaattttggtgggcaaatccatacaaagttttgctctggcttagaacggagcccccgcaactgggcggtgggattgatccctttagattagt 9926173  T
Q  410 cggtccttggatcggatatcgagtttt 436  Q
    |||||||| ||||||||| ||||||||    
T  9926172 cggtccttcgatcggataccgagtttt 9926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 26513235 - 26513148
Alignment:
Q  350 ttgctctggctttaaacggg-ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||||||| ||||||||||| |||||||||||||||||| || | || |  ||| |||||||| | ||||||||| ||| ||||||||    
T  26513235 ttgctctgactttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 373
Target Start/End: Complemental strand, 27455064 - 27454931
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||||||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| |||  ||||| || ||||||||||| || ||||    
T  27455064 atttggggttggtctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattcactctgatgccaatttcggtgagctaagt 27454966  T
Q  338 ctatacaaaactttgctctggctttaaacgggcccc 373  Q
    | ||||| | ||| ||||||||||||||||||||||    
T  27454965 ccatacagagctt-gctctggctttaaacgggcccc 27454931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 16539658 - 16539728
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctt 361  Q
    ||||||| |||||  ||| ||||||||| |||||| |||||||||||| ||||| | |||||| |||||||    
T  16539658 aaggtctcaggtttgattccctctggtgccaattttggtgggcaagtccatacagagctttgcgctggctt 16539728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 369
Target Start/End: Complemental strand, 29057535 - 29057407
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtc 338  Q
    |||||||||||| ||||||  || ||| |||| ||||||| ||||  |||  ||||||| |||||| ||| ||||| ||| |||||||| |||  |||||    
T  29057535 atttggggttggcctagtggttggtttgggatcttggagtttgctg-ctccaaaggtctcaggttcgattccctcttgtgccaatttcgatggtaaagtc 29057437  T
Q  339 tatacaaaactttgctctggctttaaacggg 369  Q
    |||||| | | ||||||||||||| ||||||    
T  29057436 tatacagagc-ttgctctggctttcaacggg 29057407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 436
Target Start/End: Original strand, 31162794 - 31162947
Alignment:
Q  285 tctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacggg--ccccacaagtggg 382  Q
    ||||||||||| ||||| || |||  |||||||  |||||||||||| || ||  |||||   ||||||||| |||||||| |||  || |||||||| |    
T  31162794 tctcttaaggttttaggctcgattcactctggtaccaatttcggtggacaggtacatacagtgctttgctctagctttaaatggggcccacacaagtgag 31162893  T
Q  383 cggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    | |||||| | ||  | || ||||||||| |||||| |||||||| ||||||||    
T  31162894 cagtgagattggtcatctctaattagtcgatccttgaatcggataccgagtttt 31162947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 35138119 - 35138185
Alignment:
Q  370 ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    |||| ||||||||||||| || |  |||  ||| |||||||||||||||||||||||| ||||||||    
T  35138119 ccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 39964544 - 39964604
Alignment:
Q  272 ttggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc 333  Q
    ||||||||||||| |||| ||||||| |||||  ||| ||||||||| ||||||||||||||    
T  39964544 ttggagtgtgctc-ctctcaaggtctcaggtttgattccctctggtgccaatttcggtgggc 39964604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 46113600 - 46113492
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  || ||| |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||||  |||||||||||||| ||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggtaccaatttcggtgggctaagt 46113502  T
Q  338 ctatacaaaa 347  Q
    | ||||||||    
T  46113501 ccatacaaaa 46113492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 52135129 - 52135224
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaa 335  Q
    |||||||||||||||||||  ||| || |||| ||||||| |||||  ||| || |||| |||||| |||| |||| ||| ||||| ||||||||||    
T  52135129 atttggggttggtctagtggttgacttgggatcttggagtttgctc-atctcaatgtctcaggttcgattatctctagtgccaattccggtgggcaa 52135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 5280 - 5081
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||  ||||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  5280 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 5182  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||| ||||||||| || | || |  ||| |||||||| | ||||||||||||| |||||||    
T  5181 ccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 437
Target Start/End: Original strand, 40324 - 40522
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  ||||||| ||||||| |||||  ||  | ||||| |||||| ||| ||||||||| |||||||||||||| ||||    
T  40324 atttggggttggcctagtggttggcttaggatcttggagtttgctccttcaga-ggtctcaggttcgattccctctggtgccaatttcggtgggctaagt 40422  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | ||||||||||||||||||||  |||| ||||||||||||| || | | ||  ||| |||||||| | ||||||||||||| |||||||    
T  40423 ccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtggga-ttggtccctcggattagtcgattcttggatcggataccgagttt 40520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 97513 - 97366
Alignment:
Q  291 aaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtg 387  Q
    ||||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | |||||||| |||||||||||  |||| |||||||||||||    
T  97513 aaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacgggacccccgcaagtgggcggtg 97415  T
Q  388 agactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     || | || || ||| ||||||||||  ||||| |||||| ||||||||    
T  97414 ggattggtcctctcgtattagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 66863 - 66951
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| |||||||||||||||||||||||| ||||||||    
T  66863 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 436
Target Start/End: Complemental strand, 7448 - 7309
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| |||| |||| |||||||||||||| ||||| ||||| | |||| |||||||||||||||||  |||| ||||||||||||| || | ||    
T  7448 aggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttt-ctctggctttaaacggggcccccgcaagtgggcggtgggattggt 7350  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
     |  ||| |||||||| | ||||||||||||| | ||||||    
T  7349 cccctcggattagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 39143 - 39290
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| | |||| ||| ||||||||| |||||||||||||| | ||| ||||| ||| ||| ||||||||||||||||  |||| |||||||||||||     
T  39143 aggtctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaac-ttgttctggctttaaacggggcccccgcaagtgggcggtgg 39241  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | |||||||| |||| |||||||||    
T  39242 gattggtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 161860 - 162007
Alignment:
Q  292 aggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtga 388  Q
    |||||| |||||| ||| ||||||||| |||||||||||||| ||||| ||||| | | ||||||||||||| || |||  |||| |||||||||||||     
T  161860 aggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggcttttaatggggcccccgcaagtgggcggtgg 161958  T
Q  389 gactagttctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
    || | || |  ||| |||||||| | |||||||| |||| |||||||||    
T  161959 gattggtcccctcggattagtcgattcttggatcagataccgagttttc 162007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 10891 - 10694
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||| | |||||||||||||| ||||    
T  10891 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagt 10793  T
Q  338 ctatacaaaactttgctctggctttaaa-cgggccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    | ||||| | | ||||||||||||||||  ||||||||||||||| ||||| || | || |  |||||||||||  | ||| ||||||||| ||||||||    
T  10792 ccatacagagc-ttgctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccgagtttt 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 437
Target Start/End: Complemental strand, 9497 - 9299
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||| | |||||||||||||| ||||    
T  9497 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagt 9399  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | |||||||||||||||| |||  |||| ||||||| ||||| || | || |  |||||||||||| | ||| ||||||||| |||||||    
T  9398 ccatacagagc-ttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagttt 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 387
Target Start/End: Complemental strand, 12198 - 12050
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||| | |||||||||||||| ||||    
T  12198 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgatttcctctggagccaatttcggtgggctaagt 12100  T
Q  338 ctatacaaaactttgctctggctttaaa-cgggccccacaagtgggcggtg 387  Q
    | ||||| | | ||||||||||||||||  ||||||||||||||| |||||    
T  12099 ccatacagagc-ttgctctggctttaaatggggccccacaagtggacggtg 12050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 437
Target Start/End: Complemental strand, 53010 - 52870
Alignment:
Q  299 aggttcaattacctctggtgtcaatttcggtgggc-aagtctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagt 395  Q
    |||||| ||| ||||||||| |||||||||||||| || || ||||| | | ||||||||||||||||||||  |||| || |||||||||  || | ||    
T  53010 aggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagc-ttgctctggctttaaacggggcccccgcaggtgggcggtaggattggt 52912  T
Q  396 tctttcgaattagtcggtccttggatcggatatcgagttttc 437  Q
     || ||| |||||||| | |||| |||||||| |||||||||    
T  52911 cctctcggattagtcgattcttgaatcggataccgagttttc 52870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 2514 - 2426
Alignment:
Q  350 ttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagtttt 436  Q
    ||||||||||||||||||||  |||| ||||||||||||| || | || |  ||| ||||||| ||||||| |||||||| ||||||||    
T  2514 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagtttt 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 436
Target Start/End: Complemental strand, 1254 - 1057
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggc-aagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| ||| ||||||| | |||||||||||||| ||||    
T  1254 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagt 1156  T
Q  338 ctatacaaaactttgctctggctttaaacggg--ccccacaagtgggcggtgagactagttctttcgaattagtcggtccttggatcggatatcgagttt 435  Q
    | ||||| | | |||||||||||||||| |||  |||| ||||||| ||||| || | || |  |||||||||||| | ||| ||||||||| |||||||    
T  1155 ccatacagagc-ttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagttt 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 8605 - 8508
Alignment:
Q  239 atttggggttggtctagtgactgatttaggatattggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgggcaagt 337  Q
    |||||||||||| ||||||  ||  || |||| ||||||| ||||| |||   |||||| |||||| |||| |||||||| ||||||||||||||||||    
T  8605 atttggggttggcctagtggttggcttgggatcttggagtttgctc-ctccagaggtctcaggttcgattatctctggtgccaatttcggtgggcaagt 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 53103 - 53169
Alignment:
Q  302 ttcaattacctctggtgtcaatttcggtgggcaagtctatacaaaactttgctctggctttaaacgg 368  Q
    ||||||| ||||||||  |||||||| ||| |||||| |||||||||||| || |||||| ||||||    
T  53103 ttcaatttcctctggtaccaatttcgatggacaagtccatacaaaactttactttggcttaaaacgg 53169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 331
Target Start/End: Original strand, 4381 - 4438
Alignment:
Q  274 ggagtgtgctctctcttaaggtcttaggttcaattacctctggtgtcaatttcggtgg 331  Q
    |||||||||||  ||||||||| |||||||| ||| ||||| |||||||||| |||||    
T  4381 ggagtgtgctccttcttaaggttttaggttcgattccctctagtgtcaatttgggtgg 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University