View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14473_low_33 (Length: 361)
Name: NF14473_low_33
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14473_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 22 - 354
Target Start/End: Complemental strand, 44542094 - 44541762
Alignment:
| Q |
22 |
tcacatacactgacgaagatacctcaaaagcaactgagactacctcccttgatcacaaggaagggctgatagaacaagaattcaagaaatattactgtga |
121 |
Q |
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| T |
44542094 |
tcacatacaccgacgaagatacctcaaaagcaactgagactacctcccttgatgacaaggaagggctgatagaacaagaattcaagaaatattactgtga |
44541995 |
T |
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| Q |
122 |
aagcaatgtttgcagtgacttatatgcaaacgatggttcacgctatgttggaaatgaagatgcagtacaaaaagaagcaattttgaacgaaacagtgaat |
221 |
Q |
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| T |
44541994 |
aagcaatgtttgcagtgacttatatgcaaacgatggttcacgctatgttggaaatgaagatgcagtacaaaaagaagcaattttgaacgaaacagcgaat |
44541895 |
T |
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| Q |
222 |
ttcactatgctgcaaaaggaacaaccatcaatattgacatcatgggttatgcccatgctgatgttaggattgctaatgctcctagttctgctgacccgtg |
321 |
Q |
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| T |
44541894 |
ttcactatgctgcaaaaggaacaaccatcaatattgacatcctgggttatgcccatgctgatgttaggattgctaatgctcctagttctgctgacccgtg |
44541795 |
T |
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| Q |
322 |
gcttacaggaatctcttaatgtttttgatgatg |
354 |
Q |
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| T |
44541794 |
gcttacaggaatctcttaatgttcttgatgatg |
44541762 |
T |
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