View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14473_low_65 (Length: 256)
Name: NF14473_low_65
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14473_low_65 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 46913793 - 46913565
Alignment:
| Q |
18 |
atgaagaggaggagaatgataaagaggaggaggaagataaaatatcaacaagaaggtgagtgaaagcttgaacaatatacttgtgagtatgtgtaggatt |
117 |
Q |
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| T |
46913793 |
atgaagaggaggagaatgataaagaggaggaggaagataaaatatcaacaagaaggtgagtgaaagcttgaacaatatacttgtgagtatgtgtaggatt |
46913694 |
T |
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| Q |
118 |
aagagcaagatagcataagagaagttcatgaagataatcccaatcattagtaacatcaaccacttgttgttgagattgaatcatttcctgcatagaacgg |
217 |
Q |
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| T |
46913693 |
aagagcaagatagcataagagaagttcatgaagataatcccaatcgttagtaacatccaccacttgttgttgagattgaatcatttcctgcatagaacgg |
46913594 |
T |
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| Q |
218 |
aggaaatcaacgtaagggtttacagaata |
246 |
Q |
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| T |
46913593 |
aggaaatcaacgtaagggtttacagaata |
46913565 |
T |
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