View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14473_low_66 (Length: 251)
Name: NF14473_low_66
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14473_low_66 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 6945256 - 6945017
Alignment:
| Q |
1 |
ggaaaaaataataattgtttcagtttttcaaatcacaaataaatcaaagaataaagacaattttaataaaccaaagtagtataagtatcatctgttttga |
100 |
Q |
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| T |
6945256 |
ggaaaaaataataattgtttcagtttttcaaatcacaaataaatcaaagaataaagacaattttaataaaccaaagtagtataagtatcatctgttttga |
6945157 |
T |
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| Q |
101 |
ttttttctttccaactaattgtgtgtcaactcaaaacaatacccttagagatggaatttgac--aagaaacaataatatggccaaaaaagtatattttgt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
6945156 |
ttttttctttccaactaattgtgtgtcaactcaaaacaatacccttagagatggaatttgacataagaaacaataatatggccaaaaaagtatattttgt |
6945057 |
T |
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| Q |
199 |
ttctctctttttatgaggttaagaagctgcctttttcctt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
6945056 |
ttctctctttttatgaggttaagaagctgcctttttcctt |
6945017 |
T |
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