View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14473_low_73 (Length: 235)
Name: NF14473_low_73
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14473_low_73 |
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Alignment Details
Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 48748070 - 48748175
Alignment:
| Q |
117 |
tataatctattatcatttttctagtcaaggaaaa-aatgctcatcttatcttatactaaatatacaggtcttattattttatttgtaaacctatataaga |
215 |
Q |
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| T |
48748070 |
tataatctattatcatttttctagtcaaggaaaaaaatgctcatcttatcttatactaaatatacaggtcttattattttatttgtaaacctatataaga |
48748169 |
T |
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| Q |
216 |
caaaat |
221 |
Q |
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|||||| |
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| T |
48748170 |
caaaat |
48748175 |
T |
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