View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14473_low_75 (Length: 232)
Name: NF14473_low_75
Description: NF14473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14473_low_75 |
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Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 5208918 - 5209121
Alignment:
| Q |
19 |
cagaagtcaacaacacctttgattttacatctaatgtccatccatttgattcctaaaacacgttttcctttgtggtgagggatgactcaaatgacaattt |
118 |
Q |
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| T |
5208918 |
cagaagtcaacaacacctttgagtttacatctaatgtccatccatttgattcctaaaacacgttttcctttgtggtgagggatgactcaaaagacaattt |
5209017 |
T |
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| Q |
119 |
gcttgagttttctactcacgttgacactaatatttgaccaattaatgaacacttaaactaaatgaattcaaataaaatagac-ggaaaaatgcaatagta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
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| T |
5209018 |
gcttgagttttctactcacgttgacactaatatttgaccaattaatgaacacttaaactaaatgaattcaaataaaatagacgggaaaaatgcaatatta |
5209117 |
T |
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| Q |
218 |
ttat |
221 |
Q |
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|||| |
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| T |
5209118 |
ttat |
5209121 |
T |
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