View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14474_high_24 (Length: 231)

Name: NF14474_high_24
Description: NF14474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14474_high_24
NF14474_high_24
[»] chr3 (58 HSPs)
chr3 (35-119)||(8674531-8674615)
chr3 (120-196)||(8674639-8674715)
chr3 (120-196)||(34673325-34673401)
chr3 (120-196)||(52945672-52945748)
chr3 (120-196)||(3283253-3283329)
chr3 (120-196)||(4126076-4126152)
chr3 (120-196)||(39328515-39328591)
chr3 (120-196)||(54253776-54253852)
chr3 (34-117)||(3283355-3283438)
chr3 (41-107)||(45408247-45408313)
chr3 (120-196)||(9665412-9665488)
chr3 (120-196)||(41355516-41355592)
chr3 (120-196)||(42092911-42092987)
chr3 (124-194)||(50090813-50090883)
chr3 (48-117)||(8351060-8351129)
chr3 (120-193)||(13700234-13700307)
chr3 (41-117)||(21395944-21396020)
chr3 (120-196)||(35280511-35280587)
chr3 (124-196)||(46969879-46969951)
chr3 (41-117)||(54160389-54160465)
chr3 (120-194)||(21395844-21395918)
chr3 (120-196)||(11238769-11238845)
chr3 (120-196)||(35180676-35180752)
chr3 (120-196)||(54411773-54411849)
chr3 (41-117)||(54411875-54411951)
chr3 (34-117)||(54253878-54253961)
chr3 (124-182)||(19228670-19228728)
chr3 (39-89)||(27027331-27027381)
chr3 (41-107)||(35711921-35711987)
chr3 (41-87)||(36418714-36418760)
chr3 (41-95)||(42092808-42092862)
chr3 (41-117)||(6125771-6125847)
chr3 (49-117)||(19855473-19855541)
chr3 (124-196)||(27037964-27038036)
chr3 (43-107)||(34673561-34673625)
chr3 (41-105)||(37702665-37702729)
chr3 (41-101)||(50090929-50090989)
chr3 (120-175)||(20513033-20513088)
chr3 (40-107)||(52945570-52945636)
chr3 (34-87)||(39328406-39328459)
chr3 (124-177)||(45408353-45408406)
chr3 (38-87)||(46770492-46770541)
chr3 (120-196)||(54160491-54160565)
chr3 (41-117)||(13700333-13700409)
chr3 (51-107)||(20513124-20513180)
chr3 (124-196)||(27026618-27026690)
chr3 (120-196)||(38101170-38101246)
chr3 (124-196)||(51614590-51614662)
chr3 (133-180)||(2911652-2911699)
chr3 (34-117)||(5232700-5232783)
chr3 (121-194)||(6125873-6125948)
chr3 (124-196)||(19855571-19855640)
chr3 (71-107)||(4126004-4126040)
chr3 (120-196)||(5232595-5232671)
chr3 (71-107)||(11238697-11238733)
chr3 (73-117)||(19228596-19228640)
chr3 (71-107)||(35280439-35280475)
chr3 (59-107)||(46354034-46354082)
[»] chr6 (21 HSPs)
chr6 (120-196)||(17347024-17347100)
chr6 (120-196)||(6322592-6322668)
chr6 (120-196)||(15081223-15081299)
chr6 (125-195)||(19143673-19143743)
chr6 (120-184)||(12159438-12159502)
chr6 (120-194)||(10075095-10075169)
chr6 (122-196)||(18102549-18102623)
chr6 (120-196)||(29427212-29427288)
chr6 (42-117)||(10074994-10075069)
chr6 (120-196)||(7190698-7190774)
chr6 (124-196)||(14975384-14975456)
chr6 (41-117)||(18096331-18096407)
chr6 (43-117)||(17347126-17347200)
chr6 (122-178)||(18096429-18096485)
chr6 (50-101)||(12159544-12159595)
chr6 (141-196)||(19102062-19102117)
chr6 (58-107)||(15081138-15081187)
chr6 (71-117)||(19104360-19104406)
chr6 (41-117)||(18102451-18102527)
chr6 (120-176)||(28295594-28295650)
chr6 (120-176)||(28516423-28516479)
[»] chr4 (60 HSPs)
chr4 (120-196)||(28589218-28589294)
chr4 (120-196)||(32868087-32868163)
chr4 (120-196)||(34041173-34041249)
chr4 (120-196)||(32089944-32090020)
chr4 (120-196)||(32626043-32626119)
chr4 (120-196)||(34728201-34728277)
chr4 (120-196)||(42434210-42434286)
chr4 (41-117)||(51702457-51702533)
chr4 (42-107)||(38963335-38963400)
chr4 (120-196)||(6137362-6137438)
chr4 (41-117)||(34728303-34728379)
chr4 (120-196)||(40479949-40480025)
chr4 (121-196)||(43837671-43837747)
chr4 (120-196)||(51682540-51682616)
chr4 (124-196)||(52719168-52719240)
chr4 (51-117)||(32626145-32626211)
chr4 (120-194)||(40875314-40875388)
chr4 (41-117)||(6137260-6137336)
chr4 (41-117)||(13386984-13387060)
chr4 (120-196)||(20835809-20835885)
chr4 (120-196)||(27907092-27907168)
chr4 (41-117)||(32090046-32090122)
chr4 (41-117)||(38427152-38427228)
chr4 (41-117)||(42434312-42434388)
chr4 (41-117)||(48860806-48860882)
chr4 (120-196)||(51702559-51702635)
chr4 (34-117)||(20835700-20835783)
chr4 (120-194)||(19329462-19329536)
chr4 (120-194)||(48860709-48860783)
chr4 (120-196)||(7645863-7645939)
chr4 (120-196)||(20503535-20503611)
chr4 (121-196)||(47960276-47960352)
chr4 (41-117)||(47960378-47960454)
chr4 (124-179)||(13387969-13388024)
chr4 (41-107)||(11020441-11020507)
chr4 (38-107)||(33117511-33117580)
chr4 (120-196)||(38427053-38427126)
chr4 (121-181)||(53773681-53773742)
chr4 (41-117)||(20503433-20503509)
chr4 (39-107)||(34041285-34041353)
chr4 (120-196)||(38792248-38792324)
chr4 (120-184)||(38962507-38962571)
chr4 (41-117)||(43837773-43837849)
chr4 (41-117)||(51682642-51682718)
chr4 (42-101)||(5975657-5975716)
chr4 (120-196)||(16467134-16467214)
chr4 (34-117)||(22254216-22254299)
chr4 (120-178)||(11020347-11020405)
chr4 (41-87)||(54158117-54158163)
chr4 (120-169)||(6944568-6944617)
chr4 (62-106)||(6944654-6944698)
chr4 (120-196)||(33117616-33117692)
chr4 (163-195)||(38963311-38963343)
chr4 (122-177)||(13387088-13387143)
chr4 (71-117)||(13372402-13372448)
chr4 (71-117)||(13382603-13382649)
chr4 (71-117)||(32868015-32868061)
chr4 (120-196)||(13372474-13372550)
chr4 (120-196)||(13382675-13382751)
chr4 (41-117)||(38962407-38962483)
[»] chr7 (53 HSPs)
chr7 (34-117)||(5995132-5995215)
chr7 (120-196)||(26927942-26928018)
chr7 (124-196)||(3203264-3203336)
chr7 (120-196)||(9522443-9522519)
chr7 (120-196)||(21993572-21993648)
chr7 (120-196)||(41378348-41378424)
chr7 (120-196)||(48227208-48227284)
chr7 (120-196)||(24611518-24611594)
chr7 (120-196)||(28333740-28333816)
chr7 (124-196)||(41585856-41585928)
chr7 (120-195)||(35983209-35983284)
chr7 (120-195)||(36004621-36004696)
chr7 (120-196)||(41037227-41037303)
chr7 (42-117)||(3961178-3961253)
chr7 (37-108)||(28059313-28059383)
chr7 (41-107)||(35983107-35983173)
chr7 (41-107)||(36004519-36004585)
chr7 (120-194)||(46003711-46003785)
chr7 (124-196)||(5995029-5995102)
chr7 (41-101)||(3203386-3203446)
chr7 (120-196)||(14656556-14656632)
chr7 (120-196)||(20009159-20009234)
chr7 (121-196)||(27131099-27131175)
chr7 (43-107)||(41037127-41037191)
chr7 (34-117)||(27130990-27131073)
chr7 (41-107)||(31953159-31953225)
chr7 (124-196)||(32392214-32392287)
chr7 (120-196)||(31953261-31953337)
chr7 (41-117)||(48227310-48227386)
chr7 (121-186)||(8953274-8953341)
chr7 (42-117)||(21993471-21993546)
chr7 (121-196)||(35221642-35221717)
chr7 (34-117)||(45099964-45100047)
chr7 (124-194)||(3961283-3961353)
chr7 (41-87)||(14313952-14313998)
chr7 (128-181)||(31853769-31853823)
chr7 (41-107)||(41378460-41378526)
chr7 (34-87)||(3875102-3875155)
chr7 (48-117)||(38368167-38368236)
chr7 (77-117)||(26928544-26928584)
chr7 (41-85)||(32392287-32392331)
chr7 (132-196)||(36343104-36343168)
chr7 (36-107)||(46003821-46003893)
chr7 (124-182)||(7596870-7596929)
chr7 (121-194)||(3875241-3875314)
chr7 (41-87)||(42373567-42373613)
chr7 (120-182)||(45100073-45100135)
chr7 (39-88)||(12362940-12362989)
chr7 (42-87)||(20417981-20418026)
chr7 (39-88)||(35221778-35221827)
chr7 (124-196)||(3349991-3350063)
chr7 (41-117)||(9522542-9522618)
chr7 (41-85)||(43077604-43077648)
[»] chr5 (35 HSPs)
chr5 (34-117)||(28038286-28038369)
chr5 (120-196)||(23204479-23204555)
chr5 (120-196)||(17689319-17689395)
chr5 (120-196)||(19995378-19995454)
chr5 (118-184)||(37172384-37172450)
chr5 (120-196)||(18015745-18015821)
chr5 (120-196)||(28813038-28813114)
chr5 (120-196)||(38758601-38758677)
chr5 (41-107)||(27365716-27365782)
chr5 (120-196)||(9741828-9741904)
chr5 (120-196)||(16490899-16490975)
chr5 (41-119)||(38758701-38758778)
chr5 (42-107)||(20269235-20269300)
chr5 (34-107)||(23204370-23204443)
chr5 (41-117)||(9741726-9741802)
chr5 (120-196)||(38293458-38293534)
chr5 (121-194)||(27365818-27365892)
chr5 (41-103)||(33429238-33429300)
chr5 (48-117)||(37172474-37172543)
chr5 (41-117)||(16994221-16994297)
chr5 (132-196)||(41283205-41283269)
chr5 (36-107)||(16273657-16273728)
chr5 (70-117)||(19325120-19325167)
chr5 (41-107)||(17689430-17689496)
chr5 (41-87)||(19323812-19323858)
chr5 (41-107)||(21913838-21913904)
chr5 (42-117)||(15978804-15978879)
chr5 (34-117)||(18015637-18015719)
chr5 (121-195)||(19863089-19863164)
chr5 (41-87)||(5807021-5807067)
chr5 (121-182)||(25593294-25593356)
chr5 (35-101)||(43126949-43127015)
chr5 (159-192)||(19323908-19323941)
chr5 (48-117)||(31042605-31042674)
chr5 (41-86)||(31056485-31056530)
[»] chr1 (46 HSPs)
chr1 (34-117)||(1838741-1838824)
chr1 (120-196)||(25825276-25825352)
chr1 (41-107)||(25825388-25825454)
chr1 (120-186)||(42470603-42470669)
chr1 (120-196)||(24992843-24992919)
chr1 (120-196)||(26284485-26284561)
chr1 (120-196)||(44720167-44720243)
chr1 (124-194)||(43939432-43939502)
chr1 (120-196)||(4105606-4105682)
chr1 (120-196)||(8549540-8549616)
chr1 (118-196)||(1469673-1469751)
chr1 (119-196)||(1838638-1838715)
chr1 (34-107)||(9005422-9005495)
chr1 (42-107)||(14463321-14463386)
chr1 (120-195)||(1627654-1627729)
chr1 (121-196)||(10769747-10769822)
chr1 (120-183)||(49660390-49660453)
chr1 (41-107)||(44720066-44720132)
chr1 (40-117)||(25671057-25671134)
chr1 (48-117)||(41146550-41146619)
chr1 (41-117)||(2964942-2965018)
chr1 (39-107)||(26213789-26213857)
chr1 (120-196)||(26897356-26897431)
chr1 (120-196)||(30414080-30414156)
chr1 (40-107)||(1627764-1627831)
chr1 (50-117)||(17452976-17453043)
chr1 (41-107)||(49659892-49659958)
chr1 (135-196)||(15660854-15660915)
chr1 (42-107)||(40460983-40461048)
chr1 (124-184)||(9005533-9005593)
chr1 (120-196)||(26842851-26842927)
chr1 (41-117)||(30414182-30414258)
chr1 (41-105)||(38509712-38509776)
chr1 (124-179)||(9338831-9338886)
chr1 (41-107)||(1406710-1406776)
chr1 (120-194)||(1406812-1406886)
chr1 (120-194)||(14463422-14463496)
chr1 (119-196)||(48875084-48875161)
chr1 (124-196)||(2964840-2964912)
chr1 (39-107)||(4105511-4105579)
chr1 (51-107)||(30289054-30289110)
chr1 (59-107)||(43939542-43939590)
chr1 (54-117)||(24992945-24993008)
chr1 (42-117)||(30819593-30819668)
chr1 (34-79)||(1469751-1469796)
chr1 (42-107)||(17168157-17168222)
[»] chr8 (58 HSPs)
chr8 (34-107)||(44873906-44873979)
chr8 (34-117)||(10078298-10078381)
chr8 (34-107)||(9479408-9479481)
chr8 (120-196)||(16930782-16930858)
chr8 (124-192)||(44508887-44508955)
chr8 (34-117)||(30774119-30774202)
chr8 (120-196)||(19922613-19922689)
chr8 (41-117)||(28539164-28539240)
chr8 (120-196)||(41624629-41624705)
chr8 (120-183)||(16645471-16645534)
chr8 (40-196)||(16784330-16784501)
chr8 (36-117)||(26912402-26912483)
chr8 (120-185)||(42806314-42806379)
chr8 (120-196)||(3210845-3210921)
chr8 (120-196)||(14916640-14916716)
chr8 (41-117)||(39077363-39077439)
chr8 (120-191)||(22812305-22812376)
chr8 (120-195)||(33568047-33568122)
chr8 (120-182)||(253942-254004)
chr8 (120-182)||(661854-661916)
chr8 (124-194)||(31272755-31272824)
chr8 (127-196)||(10078411-10078480)
chr8 (40-117)||(44473747-44473824)
chr8 (120-196)||(9478814-9478890)
chr8 (41-117)||(16930884-16930960)
chr8 (41-117)||(23472515-23472590)
chr8 (120-196)||(26912301-26912376)
chr8 (120-196)||(28539266-28539342)
chr8 (41-117)||(33568148-33568224)
chr8 (120-179)||(28969095-28969154)
chr8 (120-182)||(847652-847714)
chr8 (123-184)||(12176196-12176258)
chr8 (123-184)||(12420624-12420686)
chr8 (41-107)||(38498340-38498406)
chr8 (34-92)||(42806203-42806261)
chr8 (42-107)||(12295256-12295321)
chr8 (42-107)||(13327020-13327084)
chr8 (34-82)||(3210920-3210968)
chr8 (41-117)||(9478712-9478788)
chr8 (120-192)||(23472616-23472688)
chr8 (120-196)||(30774228-30774304)
chr8 (120-196)||(38092204-38092280)
chr8 (43-94)||(14371607-14371658)
chr8 (121-181)||(1271015-1271076)
chr8 (120-168)||(5224401-5224449)
chr8 (74-117)||(14916742-14916785)
chr8 (157-196)||(42556980-42557019)
chr8 (41-87)||(12176316-12176362)
chr8 (120-154)||(12295186-12295220)
chr8 (41-87)||(12420744-12420790)
chr8 (120-154)||(38498270-38498304)
chr8 (126-196)||(40067460-40067530)
chr8 (162-196)||(44874058-44874092)
chr8 (34-79)||(16645536-16645581)
chr8 (41-82)||(39589991-39590032)
chr8 (51-87)||(10775933-10775969)
chr8 (120-176)||(14041433-14041488)
chr8 (124-176)||(40067550-40067602)
[»] scaffold0002 (2 HSPs)
scaffold0002 (120-196)||(94787-94863)
scaffold0002 (48-117)||(478317-478386)
[»] chr2 (39 HSPs)
chr2 (120-196)||(18924514-18924590)
chr2 (120-196)||(24314317-24314394)
chr2 (120-196)||(29471609-29471685)
chr2 (120-196)||(34450356-34450432)
chr2 (34-117)||(18924616-18924699)
chr2 (124-196)||(10862621-10862693)
chr2 (120-196)||(21950742-21950818)
chr2 (120-196)||(27097074-27097150)
chr2 (121-196)||(9548185-9548260)
chr2 (34-117)||(9548287-9548370)
chr2 (34-117)||(10664768-10664851)
chr2 (125-196)||(12895436-12895506)
chr2 (34-117)||(42090408-42090491)
chr2 (41-107)||(29471721-29471787)
chr2 (120-191)||(6231261-6231332)
chr2 (120-194)||(12725694-12725768)
chr2 (40-117)||(12725794-12725871)
chr2 (120-196)||(10664666-10664742)
chr2 (41-117)||(39089180-39089256)
chr2 (34-117)||(24314208-24314291)
chr2 (51-117)||(21950650-21950716)
chr2 (34-87)||(4206423-4206476)
chr2 (41-117)||(1749995-1750071)
chr2 (37-85)||(39435040-39435088)
chr2 (124-196)||(1749891-1749965)
chr2 (120-183)||(39089091-39089154)
chr2 (34-87)||(33740228-33740281)
chr2 (124-196)||(39961513-39961586)
chr2 (34-82)||(6231214-6231262)
chr2 (41-117)||(25810482-25810558)
chr2 (125-180)||(34125539-34125595)
chr2 (132-196)||(36779779-36779843)
chr2 (34-82)||(36779856-36779904)
chr2 (42-117)||(44539920-44539996)
chr2 (120-195)||(5534265-5534340)
chr2 (41-88)||(16719833-16719880)
chr2 (41-82)||(10862577-10862618)
chr2 (34-87)||(33471424-33471477)
chr2 (120-196)||(42090517-42090593)
[»] scaffold0086 (1 HSPs)
scaffold0086 (120-196)||(8506-8582)
[»] scaffold0246 (1 HSPs)
scaffold0246 (120-196)||(17888-17964)
[»] scaffold0168 (2 HSPs)
scaffold0168 (41-105)||(35054-35118)
scaffold0168 (120-170)||(35156-35206)
[»] scaffold0093 (2 HSPs)
scaffold0093 (124-196)||(9257-9329)
scaffold0093 (48-117)||(9159-9228)
[»] scaffold0057 (1 HSPs)
scaffold0057 (120-196)||(75025-75101)
[»] scaffold0004 (2 HSPs)
scaffold0004 (124-196)||(121611-121683)
scaffold0004 (39-107)||(121723-121791)
[»] scaffold0001 (2 HSPs)
scaffold0001 (41-117)||(392406-392482)
scaffold0001 (125-196)||(392513-392584)
[»] scaffold0009 (1 HSPs)
scaffold0009 (35-107)||(49815-49887)
[»] scaffold0112 (3 HSPs)
scaffold0112 (124-191)||(35882-35949)
scaffold0112 (121-194)||(24563-24637)
scaffold0112 (34-87)||(24631-24684)
[»] scaffold0007 (1 HSPs)
scaffold0007 (43-124)||(77027-77108)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 8674531 - 8674615
Alignment:
Q  35 atatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga 119  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8674531 atatgagttttgctagaagacaccttttatgaaagtgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga 8674615  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 8674639 - 8674715
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8674639 aaagttataactaaaaagtggaaatcacaccttgaggtatgaattgctaaaagacaccttcatggatggcttctagc 8674715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 34673401 - 34673325
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  34673401 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 34673325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 52945672 - 52945748
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||| |||| || ||| ||||||||||||||||||||||||||||||||||    
T  52945672 aaagttataactaaaaagtggaaatcacactttgaggtgtgagttgctaaaagacaccttcatggatggcttctagc 52945748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 3283329 - 3283253
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||| |||||||||||||| ||||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  3283329 aaagctataactaaaaagtaaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 3283253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 4126076 - 4126152
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||| |||||||||||||| || || ||| |||||||||||||||||||||||||||||||    
T  4126076 aaagttataattaaaaagtggaaatcacaccttgaggtgtggattactaaaagacaccttcatggatggcttctagc 4126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 39328515 - 39328591
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || |||| |||||||||||||||| |||||||||||||    
T  39328515 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgttaaaagacaccttcattgatggcttctagc 39328591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 54253852 - 54253776
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  54253852 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 54253776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 3283438 - 3283355
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  3283438 tatatgggttttgctagaagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 3283355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 45408247 - 45408313
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  45408247 gttttgctagaaaacaccttttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaa 45408313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9665412 - 9665488
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||| |||| |||||  |||||||||||||| ||||| | |||||||||||    
T  9665412 aaagttataactaaaaagtgaaaatcacacattgaggtatgggttgctaaaagacacattcataggtggcttctagc 9665488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 41355516 - 41355592
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  |||||||||||||||||||||| |||||||||||    
T  41355516 aaagttataactaaaaagtggaaatcacaccttgagttgtgggttgctaaaagacaccttcatgggtggcttctagc 41355592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 42092911 - 42092987
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || |||||| ||||||| || || |||||||||| ||||||||||||||||||||||||    
T  42092911 aaagttataactaaaaaatggaaatcataccttgaggtgtggattgctaaaaaacaccttcatggatggcttctagc 42092987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 50090883 - 50090813
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||| |||||||||||| | || || |||||||||||||||||||||||||| ||||||    
T  50090883 ttataactaaaaagtggaaatcacaccttaaggtgtggattgctaaaagacaccttcatggatgacttcta 50090813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 8351060 - 8351129
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  8351060 tagaagacactttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 8351129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 13700307 - 13700234
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttct 193  Q
    |||||||||||||||||||| ||||||||| |||| || ||  |||||||||||||||||||||| ||||||||    
T  13700307 aaagttataactaaaaagtggaaatcacacattgaggtgtgggttgctaaaagacaccttcatgggtggcttct 13700234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 21396020 - 21395944
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| | |||||||    
T  21396020 gttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaact 21395944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 35280511 - 35280587
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||||||||| |||||||||||| |||||||||||    
T  35280511 aaagttataactaaaaagtggaaatcacaccttgagttgtgggttgctaaaacacaccttcatgggtggcttctagc 35280587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 46969951 - 46969879
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||| ||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  46969951 ttataactaaaaagtggaaatcataccttgatgtgtgggttgctaaaagacaccttcatgggtggcttctagc 46969879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 54160389 - 54160465
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  54160389 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctataagcatttgttaaaagacaccaact 54160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 21395918 - 21395844
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||||||||||||| |  ||  |||  ||||||||||||||||| |||||||||    
T  21395918 aaagttataactaaaaagtgaaaatcacaccttgaggcgtgggttgtcaaaagacaccttcatgggtggcttcta 21395844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 11238769 - 11238845
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||  |||||||||||||| || ||  |||||||||||||| ||||||||||  |||||||    
T  11238769 aaagttataactaaaaagtagaaatcacaccttgaggtgtgggttgctaaaagacacattcatggatgcgttctagc 11238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 35180676 - 35180752
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||  |||||||||||||| |||||| ||  |||||||||||||||| |||||||| ||||    
T  35180676 aaagttataattaaaaagtagaaatcacaccttgaggtatgagtttttaaaagacaccttcatagatggcttttagc 35180752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 54411849 - 54411773
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || |   |||||||||||||| ||||||  |||||||||||    
T  54411849 aaagttataactaaaaagtggaaatcacaccttgaggtgtaggttgctaaaagacactttcatgagtggcttctagc 54411773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 54411951 - 54411875
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | || |||||||||| |||| ||||| |||||||||||| | |||||||    
T  54411951 gttttgctagaagacaccttttatgaaggtgttttttagcaagatattctatgatcatttgctaaaagacaccaact 54411875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 54253961 - 54253878
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||| | ||||||||| | || ||||||||||||||| ||||||||||| |||||| | |||||||    
T  54253961 tatatgggttttgctagaagacgcattttatgaaggtgtattttagcaagttattctatgagcatttcctaaaagacaccaact 54253878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 19228670 - 19228728
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    |||||| ||||||||||||||||||||||||||| ||| || ||||||||||| |||||    
T  19228670 ttataattaaaaagtgaaaatcacaccttgaagtgtgagtttctaaaagacacattcat 19228728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 27027381 - 27027331
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattt 89  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  27027381 gagttttgctagaagacaccttttatgaaggtgtcttttagcaagttattt 27027331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 35711987 - 35711921
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| ||||| ||  | |||||||||||||||||| ||||||||||||||||||    
T  35711987 gttttgctagaagacacattttacgagggtgtcttttagcaagttattctatgagcatttgctaaaa 35711921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 36418714 - 36418760
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  36418714 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 36418760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 42092808 - 42092862
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgag 95  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||||||    
T  42092808 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgag 42092862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 6125771 - 6125847
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | ||||||||||||||||| ||||   |||||||||||| | |||||||    
T  6125771 gttttgctagaagacacattttatgaaggtgtcttttagcaagttatcttatagacatttgctaaaagacaccaact 6125847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 19855473 - 19855541
Alignment:
Q  49 agaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||| | |||| ||||||||||||| || ||||||||||||||| | |||||||    
T  19855473 agaagaaaccttttatgaaggtgtctattagcaagttattctacgagcatttgctaaaagacaccaact 19855541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 27038036 - 27037964
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||| |||||| ||  |  || ||||||||||||||||||| |||||||||||    
T  27038036 ttataactaaaaagtggaaatcacgccttgaggtgggggtttctaaaagacaccttcatgggtggcttctagc 27037964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 34673625 - 34673561
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||| |||||||||||||||||||| | |||||||||||||||||| ||| || ||||| |||||    
T  34673625 tttgctagaagacaccttttatgaaggtgtcttttagcaagttattatattagtatttgttaaaa 34673561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 37702729 - 37702665
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaa 105  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||  |||  |||||||||||    
T  37702729 gttttgctagaagacaccttttttgaaagtgtcttttagcaagttatcctattggcatttgctaa 37702665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 50090989 - 50090929
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| | ||||||    
T  50090989 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctattaacatttg 50090929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 20513088 - 20513033
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagaca 175  Q
    |||||||||||||||||||| ||||||||||||| ||| ||  |||||||||||||    
T  20513088 aaagttataactaaaaagtggaaatcacaccttggagtgtgggttgctaaaagaca 20513033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 52945570 - 52945636
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||| || ||||||||||| ||||||||||||||||||  ||||||||||| |||||    
T  52945570 agttttgctagaaga-acattttatgaaagtgtcttttagcaagttattcaatgagcatttggtaaaa 52945636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 39328406 - 39328459
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| | |||| |||||||||||||||||||| | |||||||||||||||||    
T  39328406 tatatggggtttgctagaagacaccttttatgaaggtgtcttttagcaagttat 39328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 45408353 - 45408406
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacc 177  Q
    |||||||||||||||| |||||||||||||| || ||  |||||||||||||||    
T  45408353 ttataactaaaaagtggaaatcacaccttgaggtgtgcgttgctaaaagacacc 45408406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 46770492 - 46770541
Alignment:
Q  38 tgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||| ||||||||||| |||||||| | |||||||||||||||||    
T  46770492 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 46770541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 54160491 - 54160565
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| |||||||||||||  |||||||| || || ||| |||||||||| |||||| | |||||||||||    
T  54160491 aaagttataacaaaaaagtgaaaat--caccttgaggtgtggattactaaaagacatcttcattggtggcttctagc 54160565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 13700409 - 13700333
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | || |||||  |||||||| | |||||||||||||||| | |||||||    
T  13700409 gttttgctagaagacacattttatgaaggtgttttttaataagttattctttgagcatttgctaaaagacaccaact 13700333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 20513180 - 20513124
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||||| | |||||||||||| ||||| |||||||||||| |||||    
T  20513180 aagacactttttatgaaggtgtcttttagcaatttattctatgagcatttgttaaaa 20513124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 27026690 - 27026618
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||| ||||||||| ||  |  || ||||||||||| ||||||| |||||||||||    
T  27026690 ttataactaaaaagtggaaattacaccttgaggtgggggtttctaaaagacacattcatgggtggcttctagc 27026618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38101246 - 38101170
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || |   ||||||||| |||| ||||||  |||||| ||||    
T  38101246 aaagttataactaaaaagtggaaatcacaccttgaggtgtaggttgctaaaaaacactttcatgagtggcttatagc 38101170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 51614662 - 51614590
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||  ||||||||| |||| || || |||||||||||| || ||  |||||||||||||||    
T  51614662 ttataactaaaaagtccaaatcacacattgaggtgtggattgctaaaagaaacttttttggatggcttctagc 51614590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 2911652 - 2911699
Alignment:
Q  133 aaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttc 180  Q
    ||||||||||||||||| || | || ||||||||||||||||||||||    
T  2911652 aaaagtgaaaatcacacattaaggtgtgaattgctaaaagacaccttc 2911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 5232783 - 5232700
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || ||||||| ||||||||| | ||| |||||||||||||| ||  |||||||| ||||| | |||||||    
T  5232783 tatatgggttttgctacaagacacattttatgaaggtgtcatttagcaagttattctagaagcatttgttaaaagacaccaact 5232700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 6125873 - 6125948
Alignment:
Q  121 aagttataactaaaaa-gtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||| ||| | ||||||||||||| || | | ||||||||| ||||||||||||||| ||||||    
T  6125873 aagttataactaaaaaagtggataatcacaccttgaggtgtaagttgctaaaaaacaccttcatggatgacttcta 6125948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 19855571 - 19855640
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||   || || || ||||||||||||||||||||  | |||||||||||    
T  19855571 ttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcagaggtggcttctagc 19855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 4126004 - 4126040
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  4126004 gtcttttaacaagttattctatgagcatttgctaaaa 4126040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 5232671 - 5232595
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||| ||||||||||||  ||||||||||| | || ||  |||||||||||||| || || |||| ||||||||    
T  5232671 aaagttacaactaaaaagtgggaatcacaccttaaggtgtgggttgctaaaagacacatttatagatgacttctagc 5232595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 11238697 - 11238733
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||| |||||||||||| |||||    
T  11238697 gtcttttagcaagttattctatgagcatttgttaaaa 11238733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 19228596 - 19228640
Alignment:
Q  73 cttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||| |||||||||||||||||| | |||||||    
T  19228596 cttttagcaaattattctatgagcatttgctaaaagacaccaact 19228640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 35280439 - 35280475
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||| |||||||||||| |||||    
T  35280439 gtcttttagcaagttattatatgagcatttgttaaaa 35280475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 46354034 - 46354082
Alignment:
Q  59 ttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||| |||||||| ||||||||||||| || ||||| |||||    
T  46354034 ttttatgaaagtgtcttttaacaagttattttataagtatttgttaaaa 46354082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 17347100 - 17347024
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  17347100 aaagttataactaaaaagtggaaatcacaccttaaagtatggattgctaaaaaacaccttcatggatggcttctagc 17347024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 6322592 - 6322668
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||| |||||||| | || || |||||||||||||||||||||||||||||||||||    
T  6322592 aaagttataactaaaaagtggaaaccacaccttaaggtgtggattgctaaaagacaccttcatggatggcttctagc 6322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 15081223 - 15081299
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  15081223 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 15081299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 19143673 - 19143743
Alignment:
Q  125 tataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||| |||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||    
T  19143673 tataactaaaaagtggaaatcacaccttgaggtatggatttctaaaagaaaccttcatggatggcttctag 19143743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 12159502 - 12159438
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    ||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||    
T  12159502 aaagttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgg 12159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 10075095 - 10075169
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||| ||||||||| |||||||||||||| || ||| ||||||||||||||||| |||| |||||||||    
T  10075095 aaagttataattaaaaagtggaaatcacaccttgaggtgtgagttgctaaaagacacctttatgggtggcttcta 10075169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 18102549 - 18102623
Alignment:
Q  122 agttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| || ||||||||    
T  18102549 agttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtgacttctagc 18102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 29427288 - 29427212
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || |||||||||| |||| || |||| |||||||||||    
T  29427288 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaaaacacatttatggctggcttctagc 29427212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 10074994 - 10075069
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||||||  ||||| ||||| | |||||||    
T  10074994 ttttgctagaagacaccttttatgaaagtgtcttttaacaagttattttatgaatatttgttaaaagacaccaact 10075069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 7190698 - 7190774
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| ||||||| |||||||||||||||| | || ||  |||||||||||||||||||||  |||||||||||    
T  7190698 aaagttatgactaaaaggtgaaaatcacaccttaaggtgtggtttgctaaaagacaccttcatgagtggcttctagc 7190774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 14975456 - 14975384
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||| |||||||||| ||||| | || ||  |||||||||||||||||||||| |||||||||||    
T  14975456 ttataactaaaaggtgaaaatcataccttaaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 14975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 18096331 - 18096407
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||| ||||| |||| | |||||||||||||||||| |||||||||||| ||||| | |||||||    
T  18096331 gttttgctagaagacatcttttgtgaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaact 18096407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 17347200 - 17347126
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||| |||||||||| ||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  17347200 tttgctagaagacacattttatgaaggtgtcttttagcaagttattatattagcatttgttaaaagacaccaact 17347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 18096429 - 18096485
Alignment:
Q  122 agttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacct 178  Q
    |||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||    
T  18096429 agttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacacct 18096485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 12159595 - 12159544
Alignment:
Q  50 gaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||||||||||||||| | |||||||||||||||||| ||| ||||||||    
T  12159595 gaagacaccttttatgaaggtgtcttttagcaagttattatattagcatttg 12159544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 19102117 - 19102062
Alignment:
Q  141 aaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||| || || |||||||||||||||||||||| ||| ||||||||    
T  19102117 aaatcacaccttgaggtgtggattgctaaaagacaccttcatgtatgacttctagc 19102062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 15081138 - 15081187
Alignment:
Q  58 cttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  15081138 cttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 15081187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 19104406 - 19104360
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||| |||||||||||||||||| ||||| | |||||||    
T  19104406 gtcttttagcaaattattttatgagcatttgttaaaagacaccaact 19104360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 18102451 - 18102527
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||| | |||||  ||| | || ||||||||||||||| |||||||||||| ||||| | |||||||    
T  18102451 gttttgctagaagatatcttttgcgaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaact 18102527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 28295594 - 28295650
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    ||||||||||| |||||||| | |||||||||||| || ||  ||||||||||||||    
T  28295594 aaagttataaccaaaaagtggatatcacaccttgaggtgtggcttgctaaaagacac 28295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 28516479 - 28516423
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    ||||||||||| |||||||| | |||||||||||| || ||  ||||||||||||||    
T  28516479 aaagttataaccaaaaagtggatatcacaccttgaggtgtggcttgctaaaagacac 28516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28589294 - 28589218
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||||||||||    
T  28589294 aaagttataactaaaaagtgaaaatcacaccttgaggtatggattgttaaaagacaccttcatgggtggcttctagc 28589218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 32868087 - 32868163
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || ||| |||||||| ||||||||||||||||||||||    
T  32868087 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattactaaaagataccttcatggatggcttctagc 32868163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 34041249 - 34041173
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||| ||||| || ||  ||||||||||||||||||||||||||||||||||    
T  34041249 aaagttataactaaaaagtgaaaatcacaacttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 34041173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 32090020 - 32089944
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||||| || || ||  ||||||||||||| ||||||||||||||||||||    
T  32090020 aaagttataactaaaaagtgaaaatcacacctcgaggtgtgggttgctaaaagacatcttcatggatggcttctagc 32089944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 32626119 - 32626043
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  32626119 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 32626043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 34728277 - 34728201
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  34728277 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 34728201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 42434286 - 42434210
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || | ||||||||||||| ||||||| |||||||||||    
T  42434286 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggaatgctaaaagacactttcatgggtggcttctagc 42434210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 51702457 - 51702533
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||    
T  51702457 gttttgctagaagacacctcttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaagaaaccaact 51702533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 38963400 - 38963335
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  38963400 ttttgctagaagacaccttttatgaatgtgtcttttagcaagttattctatgagcatttgctaaaa 38963335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 6137362 - 6137438
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||| |||| || ||| |||||||||||||||||||||  |||||||||||    
T  6137362 aaagttataactaaaaagtggaaatcacacattgaggtgtgagttgctaaaagacaccttcatgagtggcttctagc 6137438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 34728379 - 34728303
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||| | |||||||    
T  34728379 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctataagcatttgctaaaagacaccaact 34728303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 40479949 - 40480025
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |  ||| |||||||||||||||||||||| || ||||||||    
T  40479949 aaagttataactaaaaagtggaaatcacaccttgaggcgtgagttgctaaaagacaccttcatgggtgacttctagc 40480025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 43837747 - 43837671
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| | ||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  43837747 aagttataactaaaaagtggataatcacaccttgaggtgtggattgctaaaagacaccttcatgggtggcttctagc 43837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 51682616 - 51682540
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||  |||||||||||    
T  51682616 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgagtggcttctagc 51682540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 52719168 - 52719240
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||| |||||||| | | ||||||||||||| |||||| |||||||||||||    
T  52719168 ttataactaaaaagtgaaaatcacatcttgaagtgtaagttgctaaaagacatcttcatagatggcttctagc 52719240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 32626211 - 32626145
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  32626211 aagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 32626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 40875314 - 40875388
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||||| ||||| | || ||  ||||||||||||||||| ||||||||||||||    
T  40875314 aaagttataactaaaaagtgaaaatcaaaccttaaggtgtgggttgctaaaagacacctttatggatggcttcta 40875388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 6137260 - 6137336
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  6137260 gttttgctagaagacaccttttatgaatgtgtcttttagcaagttattctattagcatttgttaaaagacaccaact 6137336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 13386984 - 13387060
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| |||||| || | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  13386984 gttttgctagaagacacattttataaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 13387060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 20835809 - 20835885
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || ||||||| |||||| || ||  |||||||||||||||||||||| |||||||||||    
T  20835809 aaagttataactaaaaaatggaaatcaccccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 20835885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 27907092 - 27907168
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||   ||||||||||||||||||||| |||||| ||||    
T  27907092 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggctgctaaaagacaccttcatgggtggcttatagc 27907168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 32090122 - 32090046
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||| |||||||||| | |||||||||||||||||||||| |||||||| ||||| | |||||||    
T  32090122 gttttgctagaagacatcttttatgaaggtgtcttttagcaagttattttattagcatttgttaaaagacaccaact 32090046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 38427228 - 38427152
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| ||| | |||||| ||||| | |||||||    
T  38427228 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttattctattaacatttgttaaaagacaccaact 38427152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 42434388 - 42434312
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||||| ||||| | |||||||    
T  42434388 gttttgttagaagacaccttttaggaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaact 42434312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 48860882 - 48860806
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||||||||| || | |||||||||||||||||| |||||||||||| ||||| | |||||||    
T  48860882 gttttgctagaagacaccttttataaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaact 48860806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 51702559 - 51702635
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||   |||||||||||    
T  51702559 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcataagtggcttctagc 51702635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 20835700 - 20835783
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || ||||||||||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  20835700 tatatgggttttgctataagacaccttttatgaaggtgtcttttagcaagttattctattagcatttgttaaaagataccaact 20835783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 19329462 - 19329536
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||||||||||| ||||| ||||||||||||||    
T  19329462 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagagacctttatggatggcttcta 19329536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 48860783 - 48860709
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||| || |||||| |||||||  | ||||||||||||| ||||||||||||||| ||||||    
T  48860783 aaagttataactaaaaaatggaaatcaaaccttgagatgtgaattgctaaaaaacaccttcatggatgacttcta 48860709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 7645939 - 7645863
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||||||||    ||  |||||||||||||| ||||| | |||||||||||    
T  7645939 aaagttataactaaaaagtgaaaatcacaccttgagccgtgggttgctaaaagacacattcattggtggcttctagc 7645863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 20503535 - 20503611
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |  ||  ||||||||| |||||||||||  |||||||||||    
T  20503535 aaagttataactaaaaagtggaaatcacaccttgaggcgtgggttgctaaaaaacaccttcatgagtggcttctagc 20503611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 47960352 - 47960276
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| || | |||| |||||||| || |||||||||||||||||| |||||||||| ||||||||    
T  47960352 aagttataactaaaaaatggataatctcaccttgaggtgtgaattgctaaaagacactttcatggatgacttctagc 47960276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 47960454 - 47960378
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||  |||  ||||||||||||| | |||||||    
T  47960454 gtttggttagaagacaccttttatgaaggtgtcttttagcaagttatcctataggcatttgctaaaagacaccaact 47960378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 13387969 - 13388024
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacctt 179  Q
    |||||||||||||||| | |||||||||||| |||||| |||||||||||||||||    
T  13387969 ttataactaaaaagtggatatcacaccttgaggtatgacttgctaaaagacacctt 13388024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 11020507 - 11020441
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||| ||||||||||||||||| | || ||||||||||||||| ||||| |||||| |||||    
T  11020507 gttttgttaaaagacaccttttatgaaggtgtgttttagcaagttattctatgaacatttgttaaaa 11020441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 33117511 - 33117580
Alignment:
Q  38 tgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||| ||||||| |||||||||||| | || |||||||||| |||| ||||| ||||||||||||    
T  33117511 tgagttttgctagaagataccttttatgaaggtgtattttagcaagatattctatgatcatttgctaaaa 33117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38427126 - 38427053
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||| | || ||  |||||  ||||||| |||||||||||||||||||    
T  38427126 aaagttataactaaaaagtgaaaatcacaccttaaggtgtg-gttgct--aagacactttcatggatggcttctagc 38427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 53773742 - 53773681
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttca 181  Q
    |||||||||||||||||| || |||||||||||||||| |  ||||||||||||||||||||    
T  53773742 aagttataactaaaaagttgataatcacaccttgaagtgttgattgctaaaagacaccttca 53773681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 20503433 - 20503509
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| ||||||||||||| | || |||||||||| |||| ||||| |||||||||||| | |||||||    
T  20503433 gttttgctagaaggcaccttttatgaaggtgttttttagcaagatattctatgatcatttgctaaaagacaccaact 20503509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 34041353 - 34041285
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| |||||||||| ||||||||| | |||||||||||||||| | ||| |||||||| |||||    
T  34041353 gagttttgctagaagacacattttatgaatgtgtcttttagcaagttactctataagcatttgttaaaa 34041285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38792324 - 38792248
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||| |||| |||||||||  ||||  ||||||||| ||||||| || |||||||||||||    
T  38792324 aaagttataactaaaaggtggaaattacaccttgagatatgggttgctaaaaaacacctttattgatggcttctagc 38792248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 38962507 - 38962571
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    |||||||||| |||||||||||||||||||||||| || ||  ||| ||||| ||||||||||||    
T  38962507 aaagttataaataaaaagtgaaaatcacaccttgaggtgtgggttgttaaaaaacaccttcatgg 38962571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 43837849 - 43837773
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | ||| |||||||||||||  |||  ||||||||||||| | |||||||    
T  43837849 gttttgctagaagacaccttttatgaaggtgtcgtttagcaagttatcctataggcatttgctaaaagacaccaact 43837773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 51682718 - 51682642
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||| |||||||||||||| | || ||||||||||||||| ||||| |||||| ||||| | |||||||    
T  51682718 gttttgctagaaaacaccttttatgaaggtgttttttagcaagttattctatgaacatttgttaaaagacaccaact 51682642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 5975657 - 5975716
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||||| ||| ||||||||    
T  5975657 ttttgctagaagacacattttatgaaggtgtcttttagcaagttattatattagcatttg 5975716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 16467214 - 16467134
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagt----atgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| ||    ||| |||||||||| || ||||||| | |||||| ||||    
T  16467214 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggatggattgctaaaaaacgccttcataggtggcttatagc 16467134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 22254216 - 22254299
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||  ||||||||| | |||||||||||||||||| |||  ||||||| ||||| | |||||||    
T  22254216 tatatgggttttgctagaagacattttttatgaaggtgtcttttagcaagttattctattggcatttgttaaaagacaccaact 22254299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 11020405 - 11020347
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacct 178  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||||||||||||||||    
T  11020405 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagacacct 11020347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 54158117 - 54158163
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||    
T  54158117 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 54158163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 6944617 - 6944568
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaa 169  Q
    |||||||||||||||||||| |||||||||||| | || |||||||||||    
T  6944617 aaagttataactaaaaagtggaaatcacaccttaaggtgtgaattgctaa 6944568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 6944698 - 6944654
Alignment:
Q  62 tatgaaagcgtcttttagcaagttattttatgagcatttgctaaa 106  Q
    |||||| | |||||||||||||||||| |||||||||||||||||    
T  6944698 tatgaaggtgtcttttagcaagttattctatgagcatttgctaaa 6944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 33117616 - 33117692
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||  ||||| || | || ||  || ||||||||||||||||||  |||||||||||    
T  33117616 aaagttataactaaaaagtgaaatgcacactttaaggtgtgggtttctaaaagacaccttcatgagtggcttctagc 33117692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 38963343 - 38963311
Alignment:
Q  163 ttgctaaaagacaccttcatggatggcttctag 195  Q
    |||||||||||||||||||||||||||||||||    
T  38963343 ttgctaaaagacaccttcatggatggcttctag 38963311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 13387088 - 13387143
Alignment:
Q  122 agttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacc 177  Q
    |||||||||||||| |||||||||||||||||| || ||  ||| |||||||||||    
T  13387088 agttataactaaaatgtgaaaatcacaccttgaggtgtgtgttgttaaaagacacc 13387143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 13372402 - 13372448
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||  ||||||||||||||||| | |||||||    
T  13372402 gtcttttagcaagttattccatgagcatttgctaaaagacaccaact 13372448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 13382603 - 13382649
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||  ||||||||||||||||| | |||||||    
T  13382603 gtcttttagcaagttattccatgagcatttgctaaaagacaccaact 13382649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 32868015 - 32868061
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||| ||||||||| |||||||||||||||||| | |||||||    
T  32868015 gtcttttaacaagttattctatgagcatttgctaaaagacaccaact 32868061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 13372474 - 13372550
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| |||||||| |||||| ||||||| || |   ||| |||||||||||||||||  ||| |||||||    
T  13372474 aaagttataacaaaaaagtggaaatcataccttgaggtgtaggttgttaaaagacaccttcatgtgtggtttctagc 13372550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 13382675 - 13382751
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| |||||||| |||||| ||||||| || |   ||| |||||||||||||||||  ||| |||||||    
T  13382675 aaagttataacaaaaaagtggaaatcataccttgaggtgtaggttgttaaaagacaccttcatgtgtggtttctagc 13382751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 38962407 - 38962483
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||| ||| || ||||||| | |||||||||||||| | ||||| |||||||| ||||| | |||||||    
T  38962407 gttttgctagaatacaactattatgaaggtgtcttttagcaagtcactttataagcatttgttaaaagacaccaact 38962483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 5995215 - 5995132
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||    
T  5995215 tatatgggttttgctagaagacaccttttatgaaagtgtcttttagcaagttattatatgagcatttgctaaaagacaccaact 5995132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 26928018 - 26927942
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||| |||||||||||    
T  26928018 aaagttataactaaaaagtggaaatcacaccttgaggtgtgagttgctaaaagacaccttcatgggtggcttctagc 26927942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3203336 - 3203264
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||| || ||  |||||||||||||||||||||||||| |||||||    
T  3203336 ttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggtttctagc 3203264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 9522519 - 9522443
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || |||||||| |||||||||||||| |||||||||||    
T  9522519 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaagagacaccttcatgggtggcttctagc 9522443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 21993572 - 21993648
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || ||  ||||||||||||| |||||||| |||||||||||    
T  21993572 aaagttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaacttcatgggtggcttctagc 21993648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 41378424 - 41378348
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  41378424 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 41378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 48227284 - 48227208
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||||||  |||||||||||    
T  48227284 aaagttataactaaaaagtggaaatcacaccttgaagtgtgggttgctaaaagacaccttcatgagtggcttctagc 48227208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 24611518 - 24611594
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||| |||| || ||  |||||||||||||||||||| | |||||||||||    
T  24611518 aaagttataactaaaaagtgaaaatcacacattgaggtgtgggttgctaaaagacaccttcataggtggcttctagc 24611594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28333816 - 28333740
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || |   |||||||||||||||||||||  |||||||||||    
T  28333816 aaagttataactaaaaagtgaaaatcacaccttgacgtgttggttgctaaaagacaccttcatgagtggcttctagc 28333740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 41585928 - 41585856
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  41585928 ttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 41585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 35983209 - 35983284
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||||||||||||||||||||| | || ||  |||||||||||||||||||| | ||||||||||    
T  35983209 aaagttataactaaaaagtgaaaatcacaccttaaggtgtgggttgctaaaagacaccttcataggtggcttctag 35983284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 36004621 - 36004696
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||||||||||||||||||||| | || ||  |||||||||||||||||||| | ||||||||||    
T  36004621 aaagttataactaaaaagtgaaaatcacaccttaaggtgtgggttgctaaaagacaccttcataggtggcttctag 36004696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 41037227 - 41037303
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||| ||||||||||||||||||||| ||||||||    
T  41037227 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgttaaaagacaccttcatggatgacttctagc 41037303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 3961178 - 3961253
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  3961178 ttttgctagaagacacattttatgaaagtgtcttttagcaagttattctatgatcatttgttaaaagacaccaact 3961253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 28059383 - 28059313
Alignment:
Q  37 atgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaac 108  Q
    |||||||||| |||||||||||||||||||| |  |||||||| |||||||| |||||||||||||||||||    
T  28059383 atgagttttgctagaagacaccttttatgaagga-tcttttaggaagttattctatgagcatttgctaaaac 28059313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 35983107 - 35983173
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| |||||||||   |||||||||||||||||| ||||||||||||||||||    
T  35983107 gttttgctagaagacacattttatgaagatgtcttttagcaagttattctatgagcatttgctaaaa 35983173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 36004519 - 36004585
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| |||||||||   |||||||||||||||||| ||||||||||||||||||    
T  36004519 gttttgctagaagacacattttatgaagatgtcttttagcaagttattctatgagcatttgctaaaa 36004585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 46003785 - 46003711
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||| ||||||| |  | ||| |||||||||||||| ||||||| |||||||||    
T  46003785 aaagttataactaaaaagtgaaaattacaccttaagatgtgacttgctaaaagacacattcatgggtggcttcta 46003711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 5995102 - 5995029
Alignment:
Q  124 ttataactaaaaa-gtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||| ||| |||||||||||||| || |  |||||||||||||||||||||||||| ||||||||    
T  5995102 ttataactaaaaaagtgtaaatcacaccttgaggtgtagattgctaaaagacaccttcatggatgacttctagc 5995029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 3203446 - 3203386
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||| ||||||| |||||||||||| | |||||||||||||||||| ||||||||||||    
T  3203446 gttttgctagaagataccttttatgaaggtgtcttttagcaagttattctatgagcatttg 3203386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 14656556 - 14656632
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||||||||| |||| || ||  || ||||||||||||||||||  |||||||||||    
T  14656556 aaagttataactaaaaggtgaaaatcacacattgaggtgtgggtttctaaaagacaccttcatgagtggcttctagc 14656632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 20009234 - 20009159
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| ||||||||||| ||| |||||  |||||||||||    
T  20009234 aaagttataactaaaaagtaaaaatcacatcttgaggtatgagttgctaaaagaaacc-tcatgagtggcttctagc 20009159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 27131099 - 27131175
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||| || ||||||||||||| || || ||||||||||||||||||||||  || ||||||||    
T  27131099 aagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgtgtgtcttctagc 27131175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 41037127 - 41037191
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||||||| | ||||||||| || ||||| |||||||||||| |||||    
T  41037127 tttgttagaagacaccttttatgaaggtgtcttttagtaaattattctatgagcatttggtaaaa 41037191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 27130990 - 27131073
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| ||||||||||| |||||||| | || |||||||||||||| ||||  ||||||||||||| | |||||||    
T  27130990 tatatgggttttgctagaagacaccctttatgaaggtgttttttagcaagttatcttataggcatttgctaaaagacaccaact 27131073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 31953159 - 31953225
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||| |||||||||||||| | |||||||||||||||| | |||||||||||| |||||    
T  31953159 gttttgctagaacacaccttttatgaaggtgtcttttagcaagttagtctatgagcatttgttaaaa 31953225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 32392287 - 32392214
Alignment:
Q  124 ttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| | |||| |||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  32392287 ttataactaaaaagtggataatctcaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 32392214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 31953261 - 31953337
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||| || ||||||  ||| |||||||    
T  31953261 aaagttataactaaaaagtggaaatcacaccttgaggtgtgtgttgctaaaagatacattcatgagtggtttctagc 31953337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 48227386 - 48227310
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| | |||||||||||||||||| | || |||||||||| |||| ||||| |||||||||||| | |||||||    
T  48227386 gttttgctggaagacaccttttatgaaggtgtattttagcaagatattctatgatcatttgctaaaagacaccaact 48227310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 8953341 - 8953274
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgct-aaaagacaccttcatggat 186  Q
    |||||||||||||||||| || ||||||||||||| || ||||||||| |||| ||||||||||||||    
T  8953341 aagttataactaaaaagttgataatcacaccttgatgtgtgaattgctaaaaaaacaccttcatggat 8953274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 21993471 - 21993546
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||||| ||| |||||||  ||||| | |||||||    
T  21993471 ttttgctagaagacacattttatgaaggtgtcttttagcaagttattctattagcattttttaaaagacaccaact 21993546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 35221717 - 35221642
Alignment:
Q  121 aagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||  ||||  |||||||| || ||  |||||||||||||||||||| | |||||||||||    
T  35221717 aagttataactaaaaagtagaaatttcaccttgaggtgtgggttgctaaaagacaccttcattggtggcttctagc 35221642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 45099964 - 45100047
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||| ||||||||| | || ||||| |||||||||  ||||||||||| ||||| | |||||||    
T  45099964 tatatgggttttgctagaagacacattttatgaaggtgttttttaacaagttattcaatgagcatttgttaaaagacaccaact 45100047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 3961283 - 3961353
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||| ||||||| ||| ||||| || ||  |||||||||||||||||||||| || ||||||    
T  3961283 ttataactaaaaattgaaaatgacatcttgaggtgtgggttgctaaaagacaccttcatgggtgacttcta 3961353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 14313952 - 14313998
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||||||||||| |||||||||||| | |||||||||||||||||    
T  14313952 gttttgttagaagataccttttatgaaggtgtcttttagcaagttat 14313998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 31853769 - 31853823
Alignment:
Q  128 aactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttca 181  Q
    |||||||||||| | |||||||||||||||| || ||||||||||||||||||||    
T  31853769 aactaaaaagtggataatcacaccttgaagtgtggattgctaaaagacaccttca 31853823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 41378526 - 41378460
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| |||||| || | || ||||||||||||||| ||||| ||||||||||||    
T  41378526 gttttgctagaagacactttttattaaggtgttttttagcaagttattctatgaacatttgctaaaa 41378460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 3875102 - 3875155
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||| |||||||||| ||||||||||| || ||||||||||||||    
T  3875102 tatatgggttttgctagaagacacattttatgaaagtgtattttagcaagttat 3875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 38368167 - 38368236
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||||||||| | ||||||||||||| |||  ||| | |||||||||||| | |||||||    
T  38368167 tagaagacaccttttatgaatgtgtcttttagcaagatatcatattaacatttgctaaaagacaccaact 38368236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 26928584 - 26928544
Alignment:
Q  77 tagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  26928584 tagcaagttattttatgagcatttgctaaaagacaccaact 26928544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 32392331 - 32392287
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagtt 85  Q
    |||||| |||||||||||||||||||| | |||||||||||||||    
T  32392331 gttttgctagaagacaccttttatgaaggtgtcttttagcaagtt 32392287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 36343104 - 36343168
Alignment:
Q  132 aaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| |||||||| ||||| || ||  ||||||||| ||||||||||||||| ||||||||    
T  36343104 aaaaagtggaaatcacatcttgaggtgtgggttgctaaaaaacaccttcatggatgacttctagc 36343168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 46003893 - 46003821
Alignment:
Q  36 tatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatg-agcatttgctaaaa 107  Q
    |||| |||||| |||||||||| ||| ||||| | |||||||||||||||| | |||| ||||||||||||||    
T  46003893 tatgggttttgctagaagacacatttcatgaaggtgtcttttagcaagttactctatgaagcatttgctaaaa 46003821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 7596929 - 7596870
Alignment:
Q  124 ttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    |||||||||||||||| | |||||||| |||| || ||||||| ||||||||||||||||    
T  7596929 ttataactaaaaagtggataatcacacattgaggtgtgaattgttaaaagacaccttcat 7596870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 3875241 - 3875314
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||| |||||||| || ||||||||||||| ||||| |||| |||||||||| ||||||| || ||||||    
T  3875241 aagttataa-taaaaagttgataatcacaccttgaggtatggattgttaaaagacactttcatgggtgtcttcta 3875314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 42373613 - 42373567
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | |||||||||||| ||||    
T  42373613 gttttgctagaagacaccttttatgaatgtgtcttttagcaaattat 42373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 45100073 - 45100135
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||| |||||||||||| |||||||| ||||| |  ||  ||||||||||||||||||||    
T  45100073 aaagttacaactaaaaagtgtaaatcacatcttgaggcgtgggttgctaaaagacaccttcat 45100135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 12362989 - 12362940
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt 88  Q
    ||||| |||||||||||||| |||||||| | |||||||| |||||||||    
T  12362989 gagttctgttagaagacaccctttatgaatgtgtcttttaacaagttatt 12362940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 20418026 - 20417981
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||| |||||||||||||||||||| | |||||||||||| ||||    
T  20418026 ttttgctagaagacaccttttatgaatgtgtcttttagcaaattat 20417981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 35221827 - 35221778
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt 88  Q
    |||||||| ||||||| || ||||||||| | ||||||||||||||||||    
T  35221827 gagttttgctagaagatactttttatgaaggtgtcttttagcaagttatt 35221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3350063 - 3349991
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||||||||||  | ||  ||||||||| |||| || || | |||||||||||    
T  3350063 ttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaaaacacttttataggtggcttctagc 3349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 9522618 - 9522542
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| |||||||||   |||||||||||||||| | || ||| |||| |||||| | |||||||    
T  9522618 gttttgctagaagacacattttatgaagatgtcttttagcaagttaatctacgaggatttcctaaaagacaccaact 9522542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 43077648 - 43077604
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagtt 85  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  43077648 gttttgctagaagacaccttttatgaaggtgttttttagcaagtt 43077604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 28038369 - 28038286
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  28038369 tatatgggttttgctagaagacacattttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaacacaccaact 28038286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 23204479 - 23204555
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||| |||||||||||    
T  23204479 aaagttataactaaaaagtggaaatcacaccttgaggtgtgacttgctaaaagacaccttcatgggtggcttctagc 23204555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 17689395 - 17689319
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||| | || || |||||||||||||||||| |||| |||||||||||    
T  17689395 aaagttataactaaaaagtgaaaatcacaccttaaggtgtggattgctaaaagacaccttaatgggtggcttctagc 17689319  T

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Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 19995378 - 19995454
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || ||||||||||||| ||||||||| |||||||||||    
T  19995378 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagaccccttcatgggtggcttctagc 19995454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 37172450 - 37172384
Alignment:
Q  118 gaaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    ||||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  37172450 gaaaaattataactaaaaagtgaaaatcacaccttaaggtatggattgctaaaagacaccttcatgg 37172384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 18015745 - 18015821
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||| |||||||| |||||||||||    
T  18015745 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacatcttcatgggtggcttctagc 18015821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28813114 - 28813038
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||  |||||||||||    
T  28813114 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgagtggcttctagc 28813038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38758677 - 38758601
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||||||||  | ||  |||||||||||||||||||||  |||||||||||    
T  38758677 aaagttataactaaaaagtgaaaatcacaccttgagatgtgggttgctaaaagacaccttcatgagtggcttctagc 38758601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 27365716 - 27365782
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  27365716 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 27365782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9741828 - 9741904
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  |||||||||||||||||||||  |||||||||||    
T  9741828 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagacaccttcatgagtggcttctagc 9741904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 16490975 - 16490899
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||| ||| || ||  |||||||||||||    
T  16490975 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaaatacatctccagcgatggcttctagc 16490899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 38758778 - 38758701
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga 119  Q
    |||||| |||||||||| ||||||||| | |||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  38758778 gttttgctagaagacacattttatgaaggtgtcttttagcaagttattctatgagca-ttgctaaaagacaccaactga 38758701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 20269235 - 20269300
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| ||||||||| |||||||||| | |||||||||||||||||| ||||| ||||||||||||    
T  20269235 ttttgctagaagacagcttttatgaaggtgtcttttagcaagttattctatgaacatttgctaaaa 20269300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 23204370 - 23204443
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||| ||||||||| |||||||||| | |||||||| ||||||||| |||||||||||| |||||    
T  23204370 tatatgggttttgctagaagacatcttttatgaaggtgtcttttaacaagttattctatgagcatttgttaaaa 23204443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 9741726 - 9741802
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | |||||||| ||| ||||| |||||||||||||||||| | |||||||    
T  9741726 gttttgctagaagacacattttatgaaggtgtcttttaacaaattattctatgagcatttgctaaaaaacaccaact 9741802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38293534 - 38293458
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||| ||| || || |||| ||||||||| |||||||| |||||| ||||    
T  38293534 aaagttataactaaaaagtggaaatcacaccatgaggtgtggattgttaaaagacatcttcatggctggcttatagc 38293458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 27365818 - 27365892
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||| || ||||||||||||| || || |||||||||| |||||||||||| || ||||||    
T  27365818 aagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaaacaccttcatgggtgtcttcta 27365892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 33429300 - 33429238
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgct 103  Q
    |||||| |||||||||| ||||||||| | | |||||||||||||||| ||||||||||||||    
T  33429300 gttttgctagaagacacattttatgaaggtgccttttagcaagttattctatgagcatttgct 33429238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 37172543 - 37172474
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||||| | |||||||| ||||||||| || ||||||||||||||| | |||||||    
T  37172543 tagaagtcaccttttatgaaggtgtcttttaacaagttattctacgagcatttgctaaaagacaccaact 37172474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 16994297 - 16994221
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | ||  |||||||||||||| |||||||||||| ||||| | |||||||    
T  16994297 gttttgctagaagacacattttatgaaggtgttgtttagcaagttattctatgagcatttgttaaaagacaccaact 16994221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 41283205 - 41283269
Alignment:
Q  132 aaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| |||||||| ||||| || ||| |||||||||||||| |||||||||| ||||||||    
T  41283205 aaaaagtggaaatcacatcttgatgtgtgagttgctaaaagacacattcatggatgacttctagc 41283269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 16273728 - 16273657
Alignment:
Q  36 tatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||| |||||| ||||||||||| |||||||| | ||||||||||||||||| ||||   ||||||||||||    
T  16273728 tatgggttttgctagaagacaccctttatgaaggtgtcttttagcaagttatcttatagacatttgctaaaa 16273657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 19325167 - 19325120
Alignment:
Q  70 cgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||    
T  19325167 cgtcttttagcaagttattctatgagcatttgctaaaagaaaccaact 19325120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 17689496 - 17689430
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||| |||||| ||   ||||||||| | |||||| ||||||||||||||||||    
T  17689496 gttttgttagaagacacattttataaagatgtcttttagtaggttattctatgagcatttgctaaaa 17689430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 19323858 - 19323812
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||    
T  19323858 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 19323812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 21913904 - 21913838
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||||||||| |||||||| | |||||||||||||||||  |||  |||||||||||||    
T  21913904 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttatcctataggcatttgctaaaa 21913838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 15978804 - 15978879
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| ||| |||||| ||||||||| | |||||||||||| ||| | |||||| ||||||||||| | |||||||    
T  15978804 ttttggtaggagacacattttatgaaggtgtcttttagcaaattaatctatgagtatttgctaaaagacaccaact 15978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 18015637 - 18015719
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||| |||||||| |||||| | ||||||||||||||||||  |||| |||||| ||||| | |||||||    
T  18015637 tatatgggttttgctaga-gacaccttatatgaaggtgtcttttagcaagttattgcatgaacatttgttaaaagacaccaact 18015719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 19863164 - 19863089
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    |||||| |||||||||||| | |||||||| ||||  | || ||||||||||||||||||||||| ||| ||||||    
T  19863164 aagttaaaactaaaaagtggataatcacactttgagatgtggattgctaaaagacaccttcatgggtggtttctag 19863089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 5807067 - 5807021
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||||||| |||||| || || ||||||||||||||||    
T  5807067 gttttgttagaagacactttttataaatgcatcttttagcaagttat 5807021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 25593294 - 25593356
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||||||||||||||| | ||| ||||||| | || ||| ||||||||||||||||||||    
T  25593294 aagttataactaaaaagtggataattacaccttaaggtgtgagttgctaaaagacaccttcat 25593356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 43127015 - 43126949
Alignment:
Q  35 atatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||||||||| ||||||| | ||||||| |||| || |||||||||||||| |||| | ||||||    
T  43127015 atatgagttttgctagaagatatcttttataaaagtgttttttagcaagttatcttataaacatttg 43126949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 19323941 - 19323908
Alignment:
Q  159 tgaattgctaaaagacaccttcatggatggcttc 192  Q
    ||||||||||||||||||||| ||||||||||||    
T  19323941 tgaattgctaaaagacacctttatggatggcttc 19323908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 31042674 - 31042605
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||| |||||||| | || |||||||||||||| ||||  ||||||| ||||| | |||||||    
T  31042674 tagaagacaccctttatgaaggtgtattttagcaagttatcttataggcatttgttaaaagacaccaact 31042605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 31056530 - 31056485
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagtta 86  Q
    |||||| |||||||||||||||||||| | || |||||||||||||    
T  31056530 gttttgctagaagacaccttttatgaaggtgtattttagcaagtta 31056485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 1838824 - 1838741
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||| | |||||||    
T  1838824 tatatgagttttgttagaagacacattttatgaaagtgtcttttagtaagttattctatgagcatttgctaaaagacaccaact 1838741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 25825352 - 25825276
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  25825352 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 25825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 25825454 - 25825388
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  25825454 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttattttatgagcatttgttaaaa 25825388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 42470603 - 42470669
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggat 186  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  42470603 aaagttataactaaaaagtggaaatcacaccttgaggtgtgaattgctaaaagacaccttcatggat 42470669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 24992919 - 24992843
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  24992919 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 24992843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 26284561 - 26284485
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || |||| ||||||||| |||||||| |||||||||||    
T  26284561 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgttaaaagacatcttcatgggtggcttctagc 26284485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 44720167 - 44720243
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||| ||| |||||||||    
T  44720167 aaagttataactaaaaagtgaaaatcacaccttaaggtgtgagttgctaaaagacaccttcatagattgcttctagc 44720243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 43939502 - 43939432
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||  |||||||||    
T  43939502 ttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaaagacaccttcatgagtggcttcta 43939432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 4105606 - 4105682
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |||||| |||  |||||||    
T  4105606 aaagttataactaaaaagtgaaaatcacacattaaggtatgaattgctaaaagacactttcatgtatgatttctagc 4105682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 8549616 - 8549540
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| | || ||||||||    
T  8549616 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaaatacaccttcataggtgacttctagc 8549540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 1469751 - 1469673
Alignment:
Q  118 gaaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||| ||||||||||||||| |||||||||||||| || ||  |||||||||||||| ||||||| |||||||||||    
T  1469751 gaaaagctataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacacattcatgggtggcttctagc 1469673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 1838715 - 1838638
Alignment:
Q  119 aaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||| ||||||||| |||| || ||  |||||||||||||||||||||  |||||||||||    
T  1838715 aaaagttataactaaaaagtggaaatcacacattgaggtgtgggttgctaaaagacaccttcatgagtggcttctagc 1838638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 9005422 - 9005495
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||    
T  9005422 tatatgaattttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatcagcatttgttaaaa 9005495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 14463321 - 14463386
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||    
T  14463321 ttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaa 14463386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 1627729 - 1627654
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    |||||||||||||||||||| |||||||||||||| || ||  || ||||||||||||||||||| || |||||||    
T  1627729 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttactaaaagacaccttcatgggtgacttctag 1627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 10769822 - 10769747
Alignment:
Q  121 aagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| |||||||||||| | || || ||||||| ||| ||||||||||| |||||||||||    
T  10769822 aagttataactaaaaagtggaaatcacaccttcaggtgtggattgctataaggcaccttcatgggtggcttctagc 10769747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 49660390 - 49660453
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatg 183  Q
    |||||||||||||||||||| |||||||| ||||| || ||| |||||||||||||||||||||    
T  49660390 aaagttataactaaaaagtggaaatcacaacttgaggtgtgagttgctaaaagacaccttcatg 49660453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 44720066 - 44720132
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||| ||| |||||    
T  44720066 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttattctattagcaattggtaaaa 44720132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 25671134 - 25671057
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||| || ||||||  ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  25671134 agttttgctaaaagacatattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 25671057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 41146550 - 41146619
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||||||||| || ||||| ||||||||| |||||||||||||||||| | |||||||    
T  41146550 tagaagacactttttatgaaagtgttttttaccaagttattctatgagcatttgctaaaaaacaccaact 41146619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 2965018 - 2964942
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||| |||||||| | ||||| |||||||||||| ||||| |||||||||||| | |||||||    
T  2965018 gttttgctagaagacaccgtttatgaaggtgtcttctagcaagttattctatgaacatttgctaaaagacaccaact 2964942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 26213857 - 26213789
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| |||||||||| ||||| ||| | |||||||||||||||||| |||||||||||| |||||    
T  26213857 gagttttgctagaagacacattttacgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 26213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 26897356 - 26897431
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||| | || ||  |||||||||| ||||||||||| |||||||||||    
T  26897356 aaagttataactaaaaagtggaaatcacaccttaaggtgtg-gttgctaaaagtcaccttcatgggtggcttctagc 26897431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 30414156 - 30414080
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || |||| |||||||||  | ||  |||||||||||||||||||||| |||||||||||    
T  30414156 aaagttataactaaaaaatggaaataacaccttgagatgtgggttgctaaaagacaccttcatgggtggcttctagc 30414080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 1627831 - 1627764
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||||||||||||| ||   |||||||||||||||||| ||||| ||||||||||||    
T  1627831 agttttgctagaagacaccttttataaagatgtcttttagcaagttattctatgaacatttgctaaaa 1627764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 17453043 - 17452976
Alignment:
Q  50 gaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||| ||||||||| | ||||||||||||| |||| |||||||||||||||||| | |||||||    
T  17453043 gaagacactttttatgaaggtgtcttttagcaagctattctatgagcatttgctaaaagacaccaact 17452976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 49659892 - 49659958
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||| ||||| | || ||||||||||||||| ||||| |||||| |||||    
T  49659892 gttttgttagaagacacctttcatgaaggtgttttttagcaagttattctatgaacatttgttaaaa 49659958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 15660915 - 15660854
Alignment:
Q  135 aagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||| |||| || ||  |||||||||||||||||||||| |||||||||||    
T  15660915 aagtgaaaatcacactttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 15660854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 40460983 - 40461048
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||||| ||||| |||||| |||||    
T  40460983 ttttgatagaagacactttttatgaaggtgtcttttagcaagttattatatgaacatttgttaaaa 40461048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 9005533 - 9005593
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    ||||||||||||||||||||||||||||||| ||  | ||||||||||||||  |||||||    
T  9005533 ttataactaaaaagtgaaaatcacaccttgaggtgcggattgctaaaagacatattcatgg 9005593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 26842851 - 26842927
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || ||||||||| |||| || ||  |||||||||||| |||| |||| |||||||||||    
T  26842851 aaagttataactaaaaaatggaaatcacacattgaggtgtgggttgctaaaagacgcctttatgggtggcttctagc 26842927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 30414258 - 30414182
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||| |||||||||||||| | || ||||||||||||||| ||| |||||||| ||||| | |||||||    
T  30414258 gttttgctagaatacaccttttatgaaggtgttttttagcaagttattatattagcatttgttaaaagacaccaact 30414182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 38509776 - 38509712
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaa 105  Q
    ||||||||||||||||| ||||||||| | |||||||||||| ||||  ||| ||||||||||||    
T  38509776 gttttgttagaagacacattttatgaaggtgtcttttagcaaattatcctataagcatttgctaa 38509712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 9338831 - 9338886
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacctt 179  Q
    |||||||||||||||  ||||||||||||||||| ||  |||||||||||||||||    
T  9338831 ttataactaaaaagtagaaatcacaccttgaagtgtgggttgctaaaagacacctt 9338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 1406710 - 1406776
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| ||||||||| | |||||||||||| ||||| ||||| |||||| |||||    
T  1406710 gttttgctagaagacacattttatgaaggtgtcttttagcaaattattctatgaacatttggtaaaa 1406776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 1406812 - 1406886
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||||| ||||||||| ||||  | ||| ||| ||||| ||||||||||| ||| ||||||    
T  1406812 aaagttataactaaaaagtggaaatcacactttgagatgtgagttgttaaaaaacaccttcatgaatgacttcta 1406886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 14463422 - 14463496
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||| |||||| |||||||||||| || |  | || |||| ||||||||||||||||||||| ||||||    
T  14463422 aaagttataagtaaaaaatgaaaatcacacattaagatgtggattgttaaaagacaccttcatggatgacttcta 14463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 48875161 - 48875084
Alignment:
Q  119 aaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||  |||||||| ||||| || ||  ||||||||||| ||||| |||| | |||||||||    
T  48875161 aaaagttataactaaaaagtagaaatcacaacttgaggtgtgggttgctaaaagaaacctttatgggttgcttctagc 48875084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 2964912 - 2964840
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||| |||||||||  | || ||||||||||||||| || || | |||||||||||    
T  2964912 ttataactaaaaagtggaaatgacaccttgagatgtggattgctaaaagacacttttataggtggcttctagc 2964840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 4105511 - 4105579
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||| |||||||||| | |  ||||| ||||||||||||| | |||||| |||||    
T  4105511 gagttttgttagaagacatcttttatgaaggtgatttttaacaagttattttatcaacatttgttaaaa 4105579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 30289110 - 30289054
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||  ||||| |||||    
T  30289110 aagacacgttttatgaaggcgtcttttaacaagttattttatgaatatttgttaaaa 30289054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 43939590 - 43939542
Alignment:
Q  59 ttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  43939590 ttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 43939542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 24993008 - 24992945
Alignment:
Q  54 acaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||| | |||||||||||| ||||| ||| |||||||| ||||| | |||||||    
T  24993008 acaccttttatgaaggtgtcttttagcaaattattatattagcatttgttaaaagacaccaact 24992945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 30819668 - 30819593
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||||||||||||| | || ||||||||| ||||  |||  ||||||||||||| | |||||||    
T  30819668 ttttgctagaagacaccttttatgaaggtgttttttagcaaattatcctataggcatttgctaaaagacaccaact 30819593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 1469796 - 1469751
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttag 79  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||    
T  1469796 tatatgggttttgctagaagacaccttttatgaaggtgtcttttag 1469751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 17168157 - 17168222
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||||  ||||||| | |||||||| ||||||||| |||  |||||||||||||    
T  17168157 ttttgctagaagacaccaattatgaaggtgtcttttaacaagttattctatatgcatttgctaaaa 17168222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 44873906 - 44873979
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||    
T  44873906 tatatgagttttgttagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaa 44873979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 10078298 - 10078381
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  10078298 tatatgggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 10078381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 9479408 - 9479481
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  9479408 tatatgggttttgttagaagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaa 9479481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 16930858 - 16930782
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||| || ||||||||    
T  16930858 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagacaccttcatgggtgacttctagc 16930782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 44508955 - 44508887
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttc 192  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  44508955 ttataactaaaaggtgaaaatcacaccttgaggtatgagttgctaaaagacaccttcatgggtggcttc 44508887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 30774119 - 30774202
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||||||||||||| | || ||||||||||||||| |||||||||||||||||| | |||||||    
T  30774119 tatatgggttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaagataccaact 30774202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 19922613 - 19922689
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  19922613 aaagttataactaaaaggtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 19922689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 28539164 - 28539240
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||| ||||| | |||||||    
T  28539164 gttttgttagaagacacattttatgaatatgtcttttagcaagttattttatgagcatttgttaaaagataccaact 28539240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 41624705 - 41624629
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||| ||||||| |||||| ||||    
T  41624705 aaagttataactaaaaagtaaaaatcacaccttgaggtgtgagttgctaaaagacactttcatgggtggcttatagc 41624629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 16645534 - 16645471
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatg 183  Q
    |||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||    
T  16645534 aaagttataactaaaaagtggaaatcacaccttgaggtatgggttgctaaaagacaccttcatg 16645471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 16784330 - 16784501
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga----------------aaag 123  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||| ||| | |||||| ||||| | ||||||| |                ||||    
T  16784330 agttttgctagaagacaccttttatgaaggtgtcttttagcaagttattatattaacatttgttaaaagacaccaactaatttttatgaaggtagcaaag 16784429  T
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||| || |||||||||||||| || ||  ||||||||| ||||||||||||||||||||||||    
T  16784430 ttataactaaaaaatggaaatcacaccttgaggtgtgggttgctaaaa-acaccttcatggatggcttctagc 16784501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 26912483 - 26912402
Alignment:
Q  36 tatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||| |||||| |||||||||| ||||||||| | |||||||| ||||||||| |||||||||||||||||| | |||||||    
T  26912483 tatgggttttgctagaagacacattttatgaatgtgtcttttaacaagttattctatgagcatttgctaaaagacaccaact 26912402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 42806314 - 42806379
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgga 185  Q
    |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| ||||||||    
T  42806314 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagacactttcatgga 42806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 3210921 - 3210845
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||| |||| ||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  3210921 aaagttataattaaaaagtggaaataacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 3210845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 14916716 - 14916640
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| ||||||||||||||||||||| | || ||| ||||||||||||||||||||  |||| |||||||    
T  14916716 aaagttataacaaaaaagtgaaaatcacaccttaaggtgtgagttgctaaaagacaccttcataaatggtttctagc 14916640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 39077439 - 39077363
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  39077439 gtttttttagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgttaaaagacaccaact 39077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 22812376 - 22812305
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggctt 191  Q
    ||||||||||||||||||||||||||||| ||||| || ||  |||||||||| ||||||||||| ||||||    
T  22812376 aaagttataactaaaaagtgaaaatcacatcttgaggtgtgggttgctaaaaggcaccttcatgggtggctt 22812305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 33568122 - 33568047
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||||| | ||||||||||||||| || || |||||||||| |||||||||||| || |||||||    
T  33568122 aaagttataactaaaaaataaaaatcacaccttgaggtgtggattgctaaaaaacaccttcatgggtgacttctag 33568047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 254004 - 253942
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||||||||||||||||||||||||||||||| || |   ||||||||||||||||||||    
T  254004 aaagttataactaaaaagtgaaaatcacaccttgaggtgtaggttgctaaaagacaccttcat 253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 661854 - 661916
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||||||||||||||||||||||||||||||| || |   ||||||||||||||||||||    
T  661854 aaagttataactaaaaagtgaaaatcacaccttgaggtgtaggttgctaaaagacaccttcat 661916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 31272824 - 31272755
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||| |||||||| |||||  ||||| |||||||||||||||||||| |||||||||||    
T  31272824 ttataactaaaaagtggaaatcacatcttgagatatgagttgctaaaagacaccttcat-gatggcttcta 31272755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 10078411 - 10078480
Alignment:
Q  127 taactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||| |||||||||||||| || ||  |||||||||||||||||| ||| |||||||||||    
T  10078411 taactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcttgggtggcttctagc 10078480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 44473747 - 44473824
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| |||| ||||| | |||||||||||||||||| |||||| ||||| ||||| | |||||||    
T  44473747 agttttgttagaagacatctttcatgaaggtgtcttttagcaagttattgtatgagtatttgttaaaagacaccaact 44473824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9478814 - 9478890
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||| |||| || ||  ||||||||||| | |||||||| |||||||||||    
T  9478814 aaagttataactaaaaagtggaaatcacactttgaggtgtgggttgctaaaagatatcttcatgggtggcttctagc 9478890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 16930960 - 16930884
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||| |||||||||||| | |||||||||||||||||| |||||||||||  ||||| | |||||||    
T  16930960 gttttgatagaagataccttttatgaaggtgtcttttagcaagttattctatgagcattttttaaaagacaccaact 16930884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 23472515 - 23472590
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||    
T  23472515 gttttgctagaagacaccttttatgaaggtgtcttttagc-agttattctatgaggatttgctaaaagataccaact 23472590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 26912376 - 26912301
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||| |||||||||||||||||||||| || ||  ||||||||| |||||||||||| |||||| ||||    
T  26912376 aaagttataactgaaaagtgaaaatcacaccttgaggtgtgggttgctaaaa-acaccttcatgggtggcttttagc 26912301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 28539266 - 28539342
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||| || ||||  | ||  |||||||||||||||||||| | |||||||||||    
T  28539266 aaagttataactaaaaagtgaaaatcaaacattgagatgtgggttgctaaaagacaccttcataggtggcttctagc 28539342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 33568224 - 33568148
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| |||||| || | |||||||| ||||||||| |||||||||||| ||||| | |||||||    
T  33568224 gttttgttagaagacacattttataaaggtgtcttttatcaagttattctatgagcatttgttaaaagacaccaact 33568148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 28969154 - 28969095
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacctt 179  Q
    |||||||||||||||||||| ||||||||||||||||| ||  ||||||||| |||||||    
T  28969154 aaagttataactaaaaagtggaaatcacaccttgaagtgtgggttgctaaaatacacctt 28969095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 847652 - 847714
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||| ||||||||||||||||||||||||||| || |   ||||||||||||||||||||    
T  847652 aaagttaaaactaaaaagtgaaaatcacaccttgaggtgtaggttgctaaaagacaccttcat 847714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 12176258 - 12176196
Alignment:
Q  123 gttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    |||||||||||||||| || ||||||||||||| || || |||||||||||||||||||||||    
T  12176258 gttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgg 12176196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 12420686 - 12420624
Alignment:
Q  123 gttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    |||||||||||||||| || ||||||||||||| || || |||||||||||||||||||||||    
T  12420686 gttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgg 12420624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 38498406 - 38498340
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| | |||||| |||||    
T  38498406 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctattaacatttgttaaaa 38498340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 42806203 - 42806261
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttat 92  Q
    ||||||||||||| ||||||||||||||||||||   |||||||||||| |||||||||    
T  42806203 tatatgagttttgctagaagacaccttttatgaagatgtcttttagcaaattattttat 42806261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 12295321 - 12295256
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| || ||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||    
T  12295321 ttttgctataagacaccttttatgaatgtgtcttttagcaagttattctattagcatttgttaaaa 12295256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 13327084 - 13327020
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||| ||||||||| |  ||||||||||||||||||||||| ||||||||||||    
T  13327084 ttttgctagaagacacattttatgaaggtatcttttagcaagttattttatga-catttgctaaaa 13327020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 3210968 - 3210920
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  3210968 tatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaa 3210920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 9478712 - 9478788
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||| ||||||  || ||||||||||||||| ||| | |||||| ||||| | |||||||    
T  9478712 gttttgttagaagacacctttaatgaaaatgttttttagcaagttattctattaacatttgttaaaagacaccaact 9478788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 23472616 - 23472688
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttc 192  Q
    |||||||||||||||||||| ||||||||||||||  | |  |||||||||||||||||| |||  |||||||    
T  23472616 aaagttataactaaaaagtggaaatcacaccttgagttgtagattgctaaaagacaccttaatgagtggcttc 23472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 30774228 - 30774304
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||| ||||||||||||||| |||||||||||| | || ||  |||||||||||||||||| ||  |||||||||||    
T  30774228 aaaggtataactaaaaagtggaaatcacaccttaaggtgtgggttgctaaaagacaccttcgtgagtggcttctagc 30774304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 38092204 - 38092280
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || ||| |||||| ||| ||| || |||| ||||||||    
T  38092204 aaagttataactaaaaagtggaaatcacaccttgatgtgtggattactaaaaaacatctttatagatgacttctagc 38092280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 14371658 - 14371607
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatga 94  Q
    |||| |||||||||||||||||||| | |||||||||||||||||| |||||    
T  14371658 tttgctagaagacaccttttatgaaggtgtcttttagcaagttattatatga 14371607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 1271076 - 1271015
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttca 181  Q
    ||||||||| ||||||||| | |||||||||||||||| ||||||||||||| |||| ||||    
T  1271076 aagttataattaaaaagtggataatcacaccttgaagtgtgaattgctaaaatacacattca 1271015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 5224401 - 5224449
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgcta 168  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||||    
T  5224401 aaagttataactaaaaagtggaaatcacaccttgaggtgtgagttgcta 5224449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 14916785 - 14916742
Alignment:
Q  74 ttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||| |||||||||||||||||| | |||||||    
T  14916785 ttttagcaagttattctatgagcatttgctaaaagataccaact 14916742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 42556980 - 42557019
Alignment:
Q  157 tatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  42556980 tatggattgctaaaagacaccttcatggatgtcttctagc 42557019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 12176362 - 12176316
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||    
T  12176362 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12176316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 12295220 - 12295186
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttga 154  Q
    |||||||||||||||||||| ||||||||||||||    
T  12295220 aaagttataactaaaaagtggaaatcacaccttga 12295186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 12420790 - 12420744
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||    
T  12420790 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 38498304 - 38498270
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttga 154  Q
    |||||||||||||||||||| ||||||||||||||    
T  38498304 aaagttataactaaaaagtggaaatcacaccttga 38498270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 40067530 - 40067460
Alignment:
Q  126 ataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||| ||||||||||||||  | ||  || |||||||||| |||||||| || ||||||||    
T  40067530 ataactaaaaagtggaaatcacaccttgagatgtgggttactaaaagacatcttcatgggtgacttctagc 40067460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 44874058 - 44874092
Alignment:
Q  162 attgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||| |||||||||||    
T  44874058 attgctaaaagacaccttcatgggtggcttctagc 44874092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 16645581 - 16645536
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttag 79  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||    
T  16645581 tatatgggttttgctagaagacaccttttatgaaggtgtcttttag 16645536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 39590032 - 39589991
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    |||||| |||||||||||||||||||| | ||||||||||||    
T  39590032 gttttgctagaagacaccttttatgaaggtgtcttttagcaa 39589991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 10775933 - 10775969
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||||||||| | |||||||||||||||    
T  10775933 aagacaccttttatgaaagtgccttttagcaagttat 10775969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 14041433 - 14041488
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    |||||||||||||||||||| | ||||||||||| ||| ||| || |||||||||||    
T  14041433 aaagttataactaaaaagtggatatcacaccttg-agtgtgacttactaaaagacac 14041488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 40067602 - 40067550
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    |||||||||||||||| |||||||| ||||| || ||| ||||||||| ||||    
T  40067602 ttataactaaaaagtggaaatcacatcttgaggtgtgagttgctaaaaaacac 40067550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 94863 - 94787
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  94863 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 94787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 478317 - 478386
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||||||| | || ||||||||||||||| ||||| |||||| ||||| | |||||||    
T  478317 tagaagacactttttatgaaggtgttttttagcaagttattctatgaacatttgttaaaagacaccaact 478386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 18924590 - 18924514
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||| |||||||||||    
T  18924590 aaagttataactaaaaagtggaaatcacaccttgaggtatgggttgctaaaagacaccttcatgggtggcttctagc 18924514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 24314317 - 24314394
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat-ggatggcttctagc 196  Q
    |||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  24314317 aaagttataactaaaatgtggaaatcacaccttgaggtgtgaattgctaaaagacaccttcatgggatggcttctagc 24314394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 29471685 - 29471609
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||| |||||| || || ||||||||||||||||||||||| |||||||||||    
T  29471685 aaagttataactaaaaagtggaaatcactccttgaggtgtggattgctaaaagacaccttcatgggtggcttctagc 29471609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 34450356 - 34450432
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  34450356 aaagttataaataaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 34450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 18924699 - 18924616
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  18924699 tatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgttaaaagacaccaact 18924616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 10862621 - 10862693
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  10862621 ttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 10862693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 21950742 - 21950818
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||| ||||||| || ||  |||||||||||||| |||||||||| ||||||||    
T  21950742 aaagttataactaaaaagtgaaaatcataccttgaggtgtgggttgctaaaagacactttcatggatgacttctagc 21950818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 27097074 - 27097150
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||| ||||||||||||||||| |||||||||||    
T  27097074 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgccaaaagacaccttcatgggtggcttctagc 27097150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 9548260 - 9548185
Alignment:
Q  121 aagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| |||||||| ||||| || ||  |||||||||||||||||||||| |||||||||||    
T  9548260 aagttataactaaaaagtggaaatcacatcttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 9548185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 9548370 - 9548287
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || |||||| |||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  9548370 tatatgggttttgctataagacatcttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 9548287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 10664851 - 10664768
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||| ||||| || ||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  10664851 tatatgaattttgctataagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 10664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 12895436 - 12895506
Alignment:
Q  125 tataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||    
T  12895436 tataactaaaaagtgaaaatcacatcttgaggtgtggattgctaaaagacaccttcatgg-tggcttctagc 12895506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 42090408 - 42090491
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||| | |||||||    
T  42090408 tatatgagttttgctggaagacaccttttatgaaagtgtcttttagcaaattattctatgaacatttgttaaaagacaccaact 42090491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 29471787 - 29471721
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||||| ||||||||||||    
T  29471787 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgctaaaa 29471721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 6231261 - 6231332
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggctt 191  Q
    ||||||||||||||||||||||||||||||||| || | ||| ||||||||| |||| ||||||| ||||||    
T  6231261 aaagttataactaaaaagtgaaaatcacaccttaaaatgtgagttgctaaaaaacacattcatgggtggctt 6231332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 12725768 - 12725694
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||||| ||||||||| |||| || ||   ||||||||||||||||||||| |||||||||    
T  12725768 aaagttataactaaaaagtggaaatcacactttgaggtgtggcctgctaaaagacaccttcatgggtggcttcta 12725694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 12725871 - 12725794
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||| ||||||||||||||||| ||   |||||||||||||||||| ||||||||||| |||||| | |||||||    
T  12725871 agttttgctagaagacaccttttataaagatgtcttttagcaagttattctatgagcatttactaaaagacaccaact 12725794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 10664742 - 10664666
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  || ||||||||||||||||| | |||||| ||||    
T  10664742 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttactaaaagacaccttcatcggtggcttatagc 10664666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 39089256 - 39089180
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||| ||| | |||||| ||||| | |||||||    
T  39089256 gttttgttagaagacaccttttatgaatgtgtcttttaacaagttattctattaacatttgttaaaagacaccaact 39089180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 24314208 - 24314291
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || || ||||||||||| || | |||||||||||| |||||||||||||||||| ||||| | |||||||    
T  24314208 tatatgggttttgctaaaatacaccttttataaaggtgtcttttagcaaattattttatgagcatttgttaaaagacaccaact 24314291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 21950650 - 21950716
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| | |||||||||||||||||| |||||||||||| ||||| | |||||||    
T  21950650 aagacatcttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaaaacaccaact 21950716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 4206423 - 4206476
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||| |||||||||| ||||||||| | |||||||||||||||||    
T  4206423 tatatgagttttgctagaagacacattttatgaaggtgtcttttagcaagttat 4206476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 1750071 - 1749995
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | ||||||||||| |||||| ||| |||||||| ||||| | |||||||    
T  1750071 gttttgctagaagacacattttatgaaggtgtcttttagcaggttattctattagcatttgttaaaagacaccaact 1749995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 39435088 - 39435040
Alignment:
Q  37 atgagttttgttagaagacaccttttatgaaagcgtcttttagcaagtt 85  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  39435088 atgagttttgctagaagacaccttttatgaaagtgtcttttaacaagtt 39435040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 1749965 - 1749891
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaa--ttgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||| ||||||||| || || |  ||||||||| ||||||||||||||||||| ||||    
T  1749965 ttataactaaaaagtggaaattacaccttgaggtgtgtaggttgctaaaaaacaccttcatggatggcttgtagc 1749891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 39089154 - 39089091
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatg 183  Q
    ||||||||||||||||| || |||||| ||||||| || || |||||||||| |||||||||||    
T  39089154 aaagttataactaaaaaatggaaatcataccttgaggtgtggattgctaaaaaacaccttcatg 39089091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 33740228 - 33740281
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||  |||||||||||||||||||| | |||||||||||||||||    
T  33740228 tatatgggttttactagaagacaccttttatgaaggtgtcttttagcaagttat 33740281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 39961586 - 39961513
Alignment:
Q  124 ttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||| || ||||| || |||| || || |||||||||||||||||||||||||| ||| ||||    
T  39961586 ttataactaaaaagttgataatcatactttgaggtgtggattgctaaaagacaccttcatggatgtcttttagc 39961513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 6231214 - 6231262
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    ||||||||||||| ||||||||||| |||||||| | ||||||||||||    
T  6231214 tatatgagttttgctagaagacaccatttatgaaggtgtcttttagcaa 6231262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 25810558 - 25810482
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||| |||||||||||| | || ||||||||||||||| ||| | |||||| ||||| | |||||||    
T  25810558 gttttgctagaagataccttttatgaaggtgttttttagcaagttattatattatcatttgttaaaagacaccaact 25810482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 34125595 - 34125539
Alignment:
Q  125 tataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttc 180  Q
    |||||||||||||| || ||||||||||||| || || |||||||||||||||||||    
T  34125595 tataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttc 34125539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 36779843 - 36779779
Alignment:
Q  132 aaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| ||||||||| |||| || |  |||||||||||||| ||||||| ||||||||||||    
T  36779843 aaaaagtggaaatcacacattgaggtgtagattgctaaaagacaacttcatgtatggcttctagc 36779779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 36779904 - 36779856
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    ||||||||||||  |||||||||||||||||||| | ||||||||||||    
T  36779904 tatatgagttttcctagaagacaccttttatgaaggtgtcttttagcaa 36779856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 44539996 - 44539920
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt-ttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||| |||||||||| | ||| |||||||||||||| ||||  ||||||| ||||| | |||||||    
T  44539996 ttttgttagaagacatcttttatgaaggtgtcatttagcaagttattcttattggcatttgttaaaagataccaact 44539920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 5534340 - 5534265
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    |||||||||| ||||||||  |||||||| ||||| || || ||| |||||| | ||||||||||||| |||||||    
T  5534340 aaagttataattaaaaagttgaaatcacatcttgaggtgtggattactaaaaaataccttcatggatgacttctag 5534265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 16719880 - 16719833
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt 88  Q
    |||||| |||||||||||||||||||| | |||||||||| |||||||    
T  16719880 gttttgctagaagacaccttttatgaaggtgtcttttagctagttatt 16719833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 10862577 - 10862618
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    |||||| |||||||||||||||||||| | ||||||||||||    
T  10862577 gttttgctagaagacaccttttatgaaggtgtcttttagcaa 10862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 33471424 - 33471477
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||| ||||||| ||||||||  |||||||||| | |||||||||||||||||    
T  33471424 tatataagttttgctagaagacgtcttttatgaatgtgtcttttagcaagttat 33471477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 42090517 - 42090593
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| ||||||||||| ||| | || || ||||  ||||||||| ||||||  |||| ||||||    
T  42090517 aaagttataactaaaaaatgaaaatcacatcttaaggtgtggattgtgaaaagacactttcatgagtggcctctagc 42090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 8582 - 8506
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||| | || || ||||||||||||||||||||||| |||||||||||    
T  8582 aaagttataactaaaaagtggaaatcacaccttcaggtgtggattgctaaaagacaccttcatgggtggcttctagc 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 17888 - 17964
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |  ||| |||||||||||||||||||||| || ||||||||    
T  17888 aaagttataactaaaaagtggaaatcacaccttgaggcgtgagttgctaaaagacaccttcatgggtgacttctagc 17964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 35054 - 35118
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaa 105  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  35054 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaa 35118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 35156 - 35206
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaa 170  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||    
T  35156 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaa 35206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 9257 - 9329
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||||||||| ||||    
T  9257 ttataactaaaaagtggaaatcacaccttgaggtgtggattgcgaaaagacaccttcatggatggcttatagc 9329  T

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Target: scaffold0093; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 9159 - 9228
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||||||||| | || ||||||||||||||| |||||||||||||||||| | |||||||    
T  9159 tagaagacaccttttatgaaggtgtattttagcaagttattctatgagcatttgctaaaagataccaact 9228  T

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Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 75025 - 75101
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||  |||||  ||||||||| |||||||||||| |||||||||||    
T  75025 aaagttataactaaaaagtggaaatcacaccttggggtatgggttgctaaaatacaccttcatgggtggcttctagc 75101  T

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Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 121683 - 121611
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||  |||||||||||    
T  121683 ttataactaaaaagtggaaatcacaccttgaaatatggattgctaaaaaacaccttcatgagtggcttctagc 121611  T

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Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 121791 - 121723
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| || || |||| ||||||||| | |||||||| ||||||||| ||||||||||||||||||    
T  121791 gagttttgctataaaacacattttatgaaggtgtcttttaacaagttattctatgagcatttgctaaaa 121723  T

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Target: scaffold0001 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 392406 - 392482
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||| | |||||||    
T  392406 gttttgctagaagacaccttttatgaagatgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 392482  T

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Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 392513 - 392584
Alignment:
Q  125 tataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||| |||||||||||| | || ||  |||||||||||||||||| | | |||||||||||    
T  392513 tataactaaaaagtggaaatcacaccttaaggtgtgggttgctaaaagacaccttcgtaggtggcttctagc 392584  T

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Target: scaffold0009 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 49815 - 49887
Alignment:
Q  35 atatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||| |||||| ||||||||||||| |  ||||||||||||||||||||||| |||||| |||||    
T  49815 atatgagttttgctagaagccaccttttatgaatgtatcttttagcaagttattttatgaacatttgttaaaa 49887  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 35949 - 35882
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggctt 191  Q
    |||||||||||||||  ||| ||||||| || || | ||||||||||| |||||||||| ||||||||    
T  35949 ttataactaaaaagtagaaaacacacctggaggtgttaattgctaaaaaacaccttcatagatggctt 35882  T

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Target: scaffold0112; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 24637 - 24563
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||| |||||||| || ||||| | ||||| || ||| ||||||||||| ||||||||||||| ||||||    
T  24637 aagttataaataaaaagttgataatcaaatcttgaggtgtgacttgctaaaagagaccttcatggatgtcttcta 24563  T

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Target: scaffold0112; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 24684 - 24631
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||| |||||||||  ||||||||| | ||||| |||||||||||    
T  24684 tatatgagttttgctagaagacattttttatgaaggtgtcttgtagcaagttat 24631  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 77027 - 77108
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactgaaaagt 124  Q
    |||| ||||||||||  |||||||| | || ||||||||||||||| | | | |||||||||||| | ||||||| ||||||    
T  77027 tttgctagaagacactatttatgaaggtgttttttagcaagttattctgtaaacatttgctaaaagacaccaactaaaaagt 77108  T

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