View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14474_low_27 (Length: 231)

Name: NF14474_low_27
Description: NF14474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14474_low_27
NF14474_low_27
[»] chr3 (58 HSPs)
chr3 (35-119)||(8674531-8674615)
chr3 (120-196)||(8674639-8674715)
chr3 (120-196)||(34673325-34673401)
chr3 (120-196)||(52945672-52945748)
chr3 (120-196)||(3283253-3283329)
chr3 (120-196)||(4126076-4126152)
chr3 (120-196)||(39328515-39328591)
chr3 (120-196)||(54253776-54253852)
chr3 (34-117)||(3283355-3283438)
chr3 (41-107)||(45408247-45408313)
chr3 (120-196)||(9665412-9665488)
chr3 (120-196)||(41355516-41355592)
chr3 (120-196)||(42092911-42092987)
chr3 (124-194)||(50090813-50090883)
chr3 (48-117)||(8351060-8351129)
chr3 (120-193)||(13700234-13700307)
chr3 (41-117)||(21395944-21396020)
chr3 (120-196)||(35280511-35280587)
chr3 (124-196)||(46969879-46969951)
chr3 (41-117)||(54160389-54160465)
chr3 (120-194)||(21395844-21395918)
chr3 (120-196)||(11238769-11238845)
chr3 (120-196)||(35180676-35180752)
chr3 (120-196)||(54411773-54411849)
chr3 (41-117)||(54411875-54411951)
chr3 (34-117)||(54253878-54253961)
chr3 (124-182)||(19228670-19228728)
chr3 (39-89)||(27027331-27027381)
chr3 (41-107)||(35711921-35711987)
chr3 (41-87)||(36418714-36418760)
chr3 (41-95)||(42092808-42092862)
chr3 (41-117)||(6125771-6125847)
chr3 (49-117)||(19855473-19855541)
chr3 (124-196)||(27037964-27038036)
chr3 (43-107)||(34673561-34673625)
chr3 (41-105)||(37702665-37702729)
chr3 (41-101)||(50090929-50090989)
chr3 (120-175)||(20513033-20513088)
chr3 (40-107)||(52945570-52945636)
chr3 (34-87)||(39328406-39328459)
chr3 (124-177)||(45408353-45408406)
chr3 (38-87)||(46770492-46770541)
chr3 (120-196)||(54160491-54160565)
chr3 (41-117)||(13700333-13700409)
chr3 (51-107)||(20513124-20513180)
chr3 (124-196)||(27026618-27026690)
chr3 (120-196)||(38101170-38101246)
chr3 (124-196)||(51614590-51614662)
chr3 (133-180)||(2911652-2911699)
chr3 (34-117)||(5232700-5232783)
chr3 (121-194)||(6125873-6125948)
chr3 (124-196)||(19855571-19855640)
chr3 (71-107)||(4126004-4126040)
chr3 (120-196)||(5232595-5232671)
chr3 (71-107)||(11238697-11238733)
chr3 (73-117)||(19228596-19228640)
chr3 (71-107)||(35280439-35280475)
chr3 (59-107)||(46354034-46354082)
[»] chr6 (21 HSPs)
chr6 (120-196)||(17347024-17347100)
chr6 (120-196)||(6322592-6322668)
chr6 (120-196)||(15081223-15081299)
chr6 (125-195)||(19143673-19143743)
chr6 (120-184)||(12159438-12159502)
chr6 (120-194)||(10075095-10075169)
chr6 (122-196)||(18102549-18102623)
chr6 (120-196)||(29427212-29427288)
chr6 (42-117)||(10074994-10075069)
chr6 (120-196)||(7190698-7190774)
chr6 (124-196)||(14975384-14975456)
chr6 (41-117)||(18096331-18096407)
chr6 (43-117)||(17347126-17347200)
chr6 (122-178)||(18096429-18096485)
chr6 (50-101)||(12159544-12159595)
chr6 (141-196)||(19102062-19102117)
chr6 (58-107)||(15081138-15081187)
chr6 (71-117)||(19104360-19104406)
chr6 (41-117)||(18102451-18102527)
chr6 (120-176)||(28295594-28295650)
chr6 (120-176)||(28516423-28516479)
[»] chr4 (60 HSPs)
chr4 (120-196)||(28589218-28589294)
chr4 (120-196)||(32868087-32868163)
chr4 (120-196)||(34041173-34041249)
chr4 (120-196)||(32089944-32090020)
chr4 (120-196)||(32626043-32626119)
chr4 (120-196)||(34728201-34728277)
chr4 (120-196)||(42434210-42434286)
chr4 (41-117)||(51702457-51702533)
chr4 (42-107)||(38963335-38963400)
chr4 (120-196)||(6137362-6137438)
chr4 (41-117)||(34728303-34728379)
chr4 (120-196)||(40479949-40480025)
chr4 (121-196)||(43837671-43837747)
chr4 (120-196)||(51682540-51682616)
chr4 (124-196)||(52719168-52719240)
chr4 (51-117)||(32626145-32626211)
chr4 (120-194)||(40875314-40875388)
chr4 (41-117)||(6137260-6137336)
chr4 (41-117)||(13386984-13387060)
chr4 (120-196)||(20835809-20835885)
chr4 (120-196)||(27907092-27907168)
chr4 (41-117)||(32090046-32090122)
chr4 (41-117)||(38427152-38427228)
chr4 (41-117)||(42434312-42434388)
chr4 (41-117)||(48860806-48860882)
chr4 (120-196)||(51702559-51702635)
chr4 (34-117)||(20835700-20835783)
chr4 (120-194)||(19329462-19329536)
chr4 (120-194)||(48860709-48860783)
chr4 (120-196)||(7645863-7645939)
chr4 (120-196)||(20503535-20503611)
chr4 (121-196)||(47960276-47960352)
chr4 (41-117)||(47960378-47960454)
chr4 (124-179)||(13387969-13388024)
chr4 (41-107)||(11020441-11020507)
chr4 (38-107)||(33117511-33117580)
chr4 (120-196)||(38427053-38427126)
chr4 (121-181)||(53773681-53773742)
chr4 (41-117)||(20503433-20503509)
chr4 (39-107)||(34041285-34041353)
chr4 (120-196)||(38792248-38792324)
chr4 (120-184)||(38962507-38962571)
chr4 (41-117)||(43837773-43837849)
chr4 (41-117)||(51682642-51682718)
chr4 (42-101)||(5975657-5975716)
chr4 (120-196)||(16467134-16467214)
chr4 (34-117)||(22254216-22254299)
chr4 (120-178)||(11020347-11020405)
chr4 (41-87)||(54158117-54158163)
chr4 (120-169)||(6944568-6944617)
chr4 (62-106)||(6944654-6944698)
chr4 (120-196)||(33117616-33117692)
chr4 (163-195)||(38963311-38963343)
chr4 (122-177)||(13387088-13387143)
chr4 (71-117)||(13372402-13372448)
chr4 (71-117)||(13382603-13382649)
chr4 (71-117)||(32868015-32868061)
chr4 (120-196)||(13372474-13372550)
chr4 (120-196)||(13382675-13382751)
chr4 (41-117)||(38962407-38962483)
[»] chr7 (53 HSPs)
chr7 (34-117)||(5995132-5995215)
chr7 (120-196)||(26927942-26928018)
chr7 (124-196)||(3203264-3203336)
chr7 (120-196)||(9522443-9522519)
chr7 (120-196)||(21993572-21993648)
chr7 (120-196)||(41378348-41378424)
chr7 (120-196)||(48227208-48227284)
chr7 (120-196)||(24611518-24611594)
chr7 (120-196)||(28333740-28333816)
chr7 (124-196)||(41585856-41585928)
chr7 (120-195)||(35983209-35983284)
chr7 (120-195)||(36004621-36004696)
chr7 (120-196)||(41037227-41037303)
chr7 (42-117)||(3961178-3961253)
chr7 (37-108)||(28059313-28059383)
chr7 (41-107)||(35983107-35983173)
chr7 (41-107)||(36004519-36004585)
chr7 (120-194)||(46003711-46003785)
chr7 (124-196)||(5995029-5995102)
chr7 (41-101)||(3203386-3203446)
chr7 (120-196)||(14656556-14656632)
chr7 (120-196)||(20009159-20009234)
chr7 (121-196)||(27131099-27131175)
chr7 (43-107)||(41037127-41037191)
chr7 (34-117)||(27130990-27131073)
chr7 (41-107)||(31953159-31953225)
chr7 (124-196)||(32392214-32392287)
chr7 (120-196)||(31953261-31953337)
chr7 (41-117)||(48227310-48227386)
chr7 (121-186)||(8953274-8953341)
chr7 (42-117)||(21993471-21993546)
chr7 (121-196)||(35221642-35221717)
chr7 (34-117)||(45099964-45100047)
chr7 (124-194)||(3961283-3961353)
chr7 (41-87)||(14313952-14313998)
chr7 (128-181)||(31853769-31853823)
chr7 (41-107)||(41378460-41378526)
chr7 (34-87)||(3875102-3875155)
chr7 (48-117)||(38368167-38368236)
chr7 (77-117)||(26928544-26928584)
chr7 (41-85)||(32392287-32392331)
chr7 (132-196)||(36343104-36343168)
chr7 (36-107)||(46003821-46003893)
chr7 (124-182)||(7596870-7596929)
chr7 (121-194)||(3875241-3875314)
chr7 (41-87)||(42373567-42373613)
chr7 (120-182)||(45100073-45100135)
chr7 (39-88)||(12362940-12362989)
chr7 (42-87)||(20417981-20418026)
chr7 (39-88)||(35221778-35221827)
chr7 (124-196)||(3349991-3350063)
chr7 (41-117)||(9522542-9522618)
chr7 (41-85)||(43077604-43077648)
[»] chr5 (35 HSPs)
chr5 (34-117)||(28038286-28038369)
chr5 (120-196)||(23204479-23204555)
chr5 (120-196)||(17689319-17689395)
chr5 (120-196)||(19995378-19995454)
chr5 (118-184)||(37172384-37172450)
chr5 (120-196)||(18015745-18015821)
chr5 (120-196)||(28813038-28813114)
chr5 (120-196)||(38758601-38758677)
chr5 (41-107)||(27365716-27365782)
chr5 (120-196)||(9741828-9741904)
chr5 (120-196)||(16490899-16490975)
chr5 (41-119)||(38758701-38758778)
chr5 (42-107)||(20269235-20269300)
chr5 (34-107)||(23204370-23204443)
chr5 (41-117)||(9741726-9741802)
chr5 (120-196)||(38293458-38293534)
chr5 (121-194)||(27365818-27365892)
chr5 (41-103)||(33429238-33429300)
chr5 (48-117)||(37172474-37172543)
chr5 (41-117)||(16994221-16994297)
chr5 (132-196)||(41283205-41283269)
chr5 (36-107)||(16273657-16273728)
chr5 (70-117)||(19325120-19325167)
chr5 (41-107)||(17689430-17689496)
chr5 (41-87)||(19323812-19323858)
chr5 (41-107)||(21913838-21913904)
chr5 (42-117)||(15978804-15978879)
chr5 (34-117)||(18015637-18015719)
chr5 (121-195)||(19863089-19863164)
chr5 (41-87)||(5807021-5807067)
chr5 (121-182)||(25593294-25593356)
chr5 (35-101)||(43126949-43127015)
chr5 (159-192)||(19323908-19323941)
chr5 (48-117)||(31042605-31042674)
chr5 (41-86)||(31056485-31056530)
[»] chr1 (46 HSPs)
chr1 (34-117)||(1838741-1838824)
chr1 (120-196)||(25825276-25825352)
chr1 (41-107)||(25825388-25825454)
chr1 (120-186)||(42470603-42470669)
chr1 (120-196)||(24992843-24992919)
chr1 (120-196)||(26284485-26284561)
chr1 (120-196)||(44720167-44720243)
chr1 (124-194)||(43939432-43939502)
chr1 (120-196)||(4105606-4105682)
chr1 (120-196)||(8549540-8549616)
chr1 (118-196)||(1469673-1469751)
chr1 (119-196)||(1838638-1838715)
chr1 (34-107)||(9005422-9005495)
chr1 (42-107)||(14463321-14463386)
chr1 (120-195)||(1627654-1627729)
chr1 (121-196)||(10769747-10769822)
chr1 (120-183)||(49660390-49660453)
chr1 (41-107)||(44720066-44720132)
chr1 (40-117)||(25671057-25671134)
chr1 (48-117)||(41146550-41146619)
chr1 (41-117)||(2964942-2965018)
chr1 (39-107)||(26213789-26213857)
chr1 (120-196)||(26897356-26897431)
chr1 (120-196)||(30414080-30414156)
chr1 (40-107)||(1627764-1627831)
chr1 (50-117)||(17452976-17453043)
chr1 (41-107)||(49659892-49659958)
chr1 (135-196)||(15660854-15660915)
chr1 (42-107)||(40460983-40461048)
chr1 (124-184)||(9005533-9005593)
chr1 (120-196)||(26842851-26842927)
chr1 (41-117)||(30414182-30414258)
chr1 (41-105)||(38509712-38509776)
chr1 (124-179)||(9338831-9338886)
chr1 (41-107)||(1406710-1406776)
chr1 (120-194)||(1406812-1406886)
chr1 (120-194)||(14463422-14463496)
chr1 (119-196)||(48875084-48875161)
chr1 (124-196)||(2964840-2964912)
chr1 (39-107)||(4105511-4105579)
chr1 (51-107)||(30289054-30289110)
chr1 (59-107)||(43939542-43939590)
chr1 (54-117)||(24992945-24993008)
chr1 (42-117)||(30819593-30819668)
chr1 (34-79)||(1469751-1469796)
chr1 (42-107)||(17168157-17168222)
[»] chr8 (58 HSPs)
chr8 (34-107)||(44873906-44873979)
chr8 (34-117)||(10078298-10078381)
chr8 (34-107)||(9479408-9479481)
chr8 (120-196)||(16930782-16930858)
chr8 (124-192)||(44508887-44508955)
chr8 (34-117)||(30774119-30774202)
chr8 (120-196)||(19922613-19922689)
chr8 (41-117)||(28539164-28539240)
chr8 (120-196)||(41624629-41624705)
chr8 (120-183)||(16645471-16645534)
chr8 (40-196)||(16784330-16784501)
chr8 (36-117)||(26912402-26912483)
chr8 (120-185)||(42806314-42806379)
chr8 (120-196)||(3210845-3210921)
chr8 (120-196)||(14916640-14916716)
chr8 (41-117)||(39077363-39077439)
chr8 (120-191)||(22812305-22812376)
chr8 (120-195)||(33568047-33568122)
chr8 (120-182)||(253942-254004)
chr8 (120-182)||(661854-661916)
chr8 (124-194)||(31272755-31272824)
chr8 (127-196)||(10078411-10078480)
chr8 (40-117)||(44473747-44473824)
chr8 (120-196)||(9478814-9478890)
chr8 (41-117)||(16930884-16930960)
chr8 (41-117)||(23472515-23472590)
chr8 (120-196)||(26912301-26912376)
chr8 (120-196)||(28539266-28539342)
chr8 (41-117)||(33568148-33568224)
chr8 (120-179)||(28969095-28969154)
chr8 (120-182)||(847652-847714)
chr8 (123-184)||(12176196-12176258)
chr8 (123-184)||(12420624-12420686)
chr8 (41-107)||(38498340-38498406)
chr8 (34-92)||(42806203-42806261)
chr8 (42-107)||(12295256-12295321)
chr8 (42-107)||(13327020-13327084)
chr8 (34-82)||(3210920-3210968)
chr8 (41-117)||(9478712-9478788)
chr8 (120-192)||(23472616-23472688)
chr8 (120-196)||(30774228-30774304)
chr8 (120-196)||(38092204-38092280)
chr8 (43-94)||(14371607-14371658)
chr8 (121-181)||(1271015-1271076)
chr8 (120-168)||(5224401-5224449)
chr8 (74-117)||(14916742-14916785)
chr8 (157-196)||(42556980-42557019)
chr8 (41-87)||(12176316-12176362)
chr8 (120-154)||(12295186-12295220)
chr8 (41-87)||(12420744-12420790)
chr8 (120-154)||(38498270-38498304)
chr8 (126-196)||(40067460-40067530)
chr8 (162-196)||(44874058-44874092)
chr8 (34-79)||(16645536-16645581)
chr8 (41-82)||(39589991-39590032)
chr8 (51-87)||(10775933-10775969)
chr8 (120-176)||(14041433-14041488)
chr8 (124-176)||(40067550-40067602)
[»] scaffold0002 (2 HSPs)
scaffold0002 (120-196)||(94787-94863)
scaffold0002 (48-117)||(478317-478386)
[»] chr2 (39 HSPs)
chr2 (120-196)||(18924514-18924590)
chr2 (120-196)||(24314317-24314394)
chr2 (120-196)||(29471609-29471685)
chr2 (120-196)||(34450356-34450432)
chr2 (34-117)||(18924616-18924699)
chr2 (124-196)||(10862621-10862693)
chr2 (120-196)||(21950742-21950818)
chr2 (120-196)||(27097074-27097150)
chr2 (121-196)||(9548185-9548260)
chr2 (34-117)||(9548287-9548370)
chr2 (34-117)||(10664768-10664851)
chr2 (125-196)||(12895436-12895506)
chr2 (34-117)||(42090408-42090491)
chr2 (41-107)||(29471721-29471787)
chr2 (120-191)||(6231261-6231332)
chr2 (120-194)||(12725694-12725768)
chr2 (40-117)||(12725794-12725871)
chr2 (120-196)||(10664666-10664742)
chr2 (41-117)||(39089180-39089256)
chr2 (34-117)||(24314208-24314291)
chr2 (51-117)||(21950650-21950716)
chr2 (34-87)||(4206423-4206476)
chr2 (41-117)||(1749995-1750071)
chr2 (37-85)||(39435040-39435088)
chr2 (124-196)||(1749891-1749965)
chr2 (120-183)||(39089091-39089154)
chr2 (34-87)||(33740228-33740281)
chr2 (124-196)||(39961513-39961586)
chr2 (34-82)||(6231214-6231262)
chr2 (41-117)||(25810482-25810558)
chr2 (125-180)||(34125539-34125595)
chr2 (132-196)||(36779779-36779843)
chr2 (34-82)||(36779856-36779904)
chr2 (42-117)||(44539920-44539996)
chr2 (120-195)||(5534265-5534340)
chr2 (41-88)||(16719833-16719880)
chr2 (41-82)||(10862577-10862618)
chr2 (34-87)||(33471424-33471477)
chr2 (120-196)||(42090517-42090593)
[»] scaffold0086 (1 HSPs)
scaffold0086 (120-196)||(8506-8582)
[»] scaffold0246 (1 HSPs)
scaffold0246 (120-196)||(17888-17964)
[»] scaffold0168 (2 HSPs)
scaffold0168 (41-105)||(35054-35118)
scaffold0168 (120-170)||(35156-35206)
[»] scaffold0093 (2 HSPs)
scaffold0093 (124-196)||(9257-9329)
scaffold0093 (48-117)||(9159-9228)
[»] scaffold0057 (1 HSPs)
scaffold0057 (120-196)||(75025-75101)
[»] scaffold0004 (2 HSPs)
scaffold0004 (124-196)||(121611-121683)
scaffold0004 (39-107)||(121723-121791)
[»] scaffold0001 (2 HSPs)
scaffold0001 (41-117)||(392406-392482)
scaffold0001 (125-196)||(392513-392584)
[»] scaffold0009 (1 HSPs)
scaffold0009 (35-107)||(49815-49887)
[»] scaffold0112 (3 HSPs)
scaffold0112 (124-191)||(35882-35949)
scaffold0112 (121-194)||(24563-24637)
scaffold0112 (34-87)||(24631-24684)
[»] scaffold0007 (1 HSPs)
scaffold0007 (43-124)||(77027-77108)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 8674531 - 8674615
Alignment:
Q  35 atatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga 119  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8674531 atatgagttttgctagaagacaccttttatgaaagtgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga 8674615  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 8674639 - 8674715
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8674639 aaagttataactaaaaagtggaaatcacaccttgaggtatgaattgctaaaagacaccttcatggatggcttctagc 8674715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 34673401 - 34673325
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  34673401 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 34673325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 52945672 - 52945748
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||| |||| || ||| ||||||||||||||||||||||||||||||||||    
T  52945672 aaagttataactaaaaagtggaaatcacactttgaggtgtgagttgctaaaagacaccttcatggatggcttctagc 52945748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 3283329 - 3283253
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||| |||||||||||||| ||||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  3283329 aaagctataactaaaaagtaaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 3283253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 4126076 - 4126152
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||| |||||||||||||| || || ||| |||||||||||||||||||||||||||||||    
T  4126076 aaagttataattaaaaagtggaaatcacaccttgaggtgtggattactaaaagacaccttcatggatggcttctagc 4126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 39328515 - 39328591
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || |||| |||||||||||||||| |||||||||||||    
T  39328515 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgttaaaagacaccttcattgatggcttctagc 39328591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 54253852 - 54253776
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  54253852 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 54253776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 3283438 - 3283355
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  3283438 tatatgggttttgctagaagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 3283355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 45408247 - 45408313
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  45408247 gttttgctagaaaacaccttttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaa 45408313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9665412 - 9665488
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||| |||| |||||  |||||||||||||| ||||| | |||||||||||    
T  9665412 aaagttataactaaaaagtgaaaatcacacattgaggtatgggttgctaaaagacacattcataggtggcttctagc 9665488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 41355516 - 41355592
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  |||||||||||||||||||||| |||||||||||    
T  41355516 aaagttataactaaaaagtggaaatcacaccttgagttgtgggttgctaaaagacaccttcatgggtggcttctagc 41355592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 42092911 - 42092987
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || |||||| ||||||| || || |||||||||| ||||||||||||||||||||||||    
T  42092911 aaagttataactaaaaaatggaaatcataccttgaggtgtggattgctaaaaaacaccttcatggatggcttctagc 42092987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 50090883 - 50090813
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||| |||||||||||| | || || |||||||||||||||||||||||||| ||||||    
T  50090883 ttataactaaaaagtggaaatcacaccttaaggtgtggattgctaaaagacaccttcatggatgacttcta 50090813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 8351060 - 8351129
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  8351060 tagaagacactttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 8351129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 13700307 - 13700234
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttct 193  Q
    |||||||||||||||||||| ||||||||| |||| || ||  |||||||||||||||||||||| ||||||||    
T  13700307 aaagttataactaaaaagtggaaatcacacattgaggtgtgggttgctaaaagacaccttcatgggtggcttct 13700234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 21396020 - 21395944
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| | |||||||    
T  21396020 gttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaact 21395944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 35280511 - 35280587
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||||||||| |||||||||||| |||||||||||    
T  35280511 aaagttataactaaaaagtggaaatcacaccttgagttgtgggttgctaaaacacaccttcatgggtggcttctagc 35280587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 46969951 - 46969879
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||| ||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  46969951 ttataactaaaaagtggaaatcataccttgatgtgtgggttgctaaaagacaccttcatgggtggcttctagc 46969879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 54160389 - 54160465
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  54160389 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctataagcatttgttaaaagacaccaact 54160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 21395918 - 21395844
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||||||||||||| |  ||  |||  ||||||||||||||||| |||||||||    
T  21395918 aaagttataactaaaaagtgaaaatcacaccttgaggcgtgggttgtcaaaagacaccttcatgggtggcttcta 21395844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 11238769 - 11238845
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||  |||||||||||||| || ||  |||||||||||||| ||||||||||  |||||||    
T  11238769 aaagttataactaaaaagtagaaatcacaccttgaggtgtgggttgctaaaagacacattcatggatgcgttctagc 11238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 35180676 - 35180752
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||  |||||||||||||| |||||| ||  |||||||||||||||| |||||||| ||||    
T  35180676 aaagttataattaaaaagtagaaatcacaccttgaggtatgagtttttaaaagacaccttcatagatggcttttagc 35180752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 54411849 - 54411773
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || |   |||||||||||||| ||||||  |||||||||||    
T  54411849 aaagttataactaaaaagtggaaatcacaccttgaggtgtaggttgctaaaagacactttcatgagtggcttctagc 54411773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 54411951 - 54411875
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | || |||||||||| |||| ||||| |||||||||||| | |||||||    
T  54411951 gttttgctagaagacaccttttatgaaggtgttttttagcaagatattctatgatcatttgctaaaagacaccaact 54411875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 54253961 - 54253878
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||| | ||||||||| | || ||||||||||||||| ||||||||||| |||||| | |||||||    
T  54253961 tatatgggttttgctagaagacgcattttatgaaggtgtattttagcaagttattctatgagcatttcctaaaagacaccaact 54253878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 19228670 - 19228728
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    |||||| ||||||||||||||||||||||||||| ||| || ||||||||||| |||||    
T  19228670 ttataattaaaaagtgaaaatcacaccttgaagtgtgagtttctaaaagacacattcat 19228728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 27027381 - 27027331
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattt 89  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  27027381 gagttttgctagaagacaccttttatgaaggtgtcttttagcaagttattt 27027331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 35711987 - 35711921
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| ||||| ||  | |||||||||||||||||| ||||||||||||||||||    
T  35711987 gttttgctagaagacacattttacgagggtgtcttttagcaagttattctatgagcatttgctaaaa 35711921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 36418714 - 36418760
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  36418714 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttat 36418760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 42092808 - 42092862
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgag 95  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||||||    
T  42092808 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgag 42092862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 6125771 - 6125847
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | ||||||||||||||||| ||||   |||||||||||| | |||||||    
T  6125771 gttttgctagaagacacattttatgaaggtgtcttttagcaagttatcttatagacatttgctaaaagacaccaact 6125847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 19855473 - 19855541
Alignment:
Q  49 agaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||| | |||| ||||||||||||| || ||||||||||||||| | |||||||    
T  19855473 agaagaaaccttttatgaaggtgtctattagcaagttattctacgagcatttgctaaaagacaccaact 19855541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 27038036 - 27037964
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||| |||||| ||  |  || ||||||||||||||||||| |||||||||||    
T  27038036 ttataactaaaaagtggaaatcacgccttgaggtgggggtttctaaaagacaccttcatgggtggcttctagc 27037964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 34673625 - 34673561
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||| |||||||||||||||||||| | |||||||||||||||||| ||| || ||||| |||||    
T  34673625 tttgctagaagacaccttttatgaaggtgtcttttagcaagttattatattagtatttgttaaaa 34673561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 37702729 - 37702665
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaa 105  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||  |||  |||||||||||    
T  37702729 gttttgctagaagacaccttttttgaaagtgtcttttagcaagttatcctattggcatttgctaa 37702665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 50090989 - 50090929
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| | ||||||    
T  50090989 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctattaacatttg 50090929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 20513088 - 20513033
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagaca 175  Q
    |||||||||||||||||||| ||||||||||||| ||| ||  |||||||||||||    
T  20513088 aaagttataactaaaaagtggaaatcacaccttggagtgtgggttgctaaaagaca 20513033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 52945570 - 52945636
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||| || ||||||||||| ||||||||||||||||||  ||||||||||| |||||    
T  52945570 agttttgctagaaga-acattttatgaaagtgtcttttagcaagttattcaatgagcatttggtaaaa 52945636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 39328406 - 39328459
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| | |||| |||||||||||||||||||| | |||||||||||||||||    
T  39328406 tatatggggtttgctagaagacaccttttatgaaggtgtcttttagcaagttat 39328459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 45408353 - 45408406
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacc 177  Q
    |||||||||||||||| |||||||||||||| || ||  |||||||||||||||    
T  45408353 ttataactaaaaagtggaaatcacaccttgaggtgtgcgttgctaaaagacacc 45408406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 46770492 - 46770541
Alignment:
Q  38 tgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||| ||||||||||| |||||||| | |||||||||||||||||    
T  46770492 tgagttttgctagaagacaccctttatgaaggtgtcttttagcaagttat 46770541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 54160491 - 54160565
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| |||||||||||||  |||||||| || || ||| |||||||||| |||||| | |||||||||||    
T  54160491 aaagttataacaaaaaagtgaaaat--caccttgaggtgtggattactaaaagacatcttcattggtggcttctagc 54160565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 13700409 - 13700333
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | || |||||  |||||||| | |||||||||||||||| | |||||||    
T  13700409 gttttgctagaagacacattttatgaaggtgttttttaataagttattctttgagcatttgctaaaagacaccaact 13700333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 20513180 - 20513124
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||||| | |||||||||||| ||||| |||||||||||| |||||    
T  20513180 aagacactttttatgaaggtgtcttttagcaatttattctatgagcatttgttaaaa 20513124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 27026690 - 27026618
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||| ||||||||| ||  |  || ||||||||||| ||||||| |||||||||||    
T  27026690 ttataactaaaaagtggaaattacaccttgaggtgggggtttctaaaagacacattcatgggtggcttctagc 27026618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38101246 - 38101170
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || |   ||||||||| |||| ||||||  |||||| ||||    
T  38101246 aaagttataactaaaaagtggaaatcacaccttgaggtgtaggttgctaaaaaacactttcatgagtggcttatagc 38101170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 51614662 - 51614590
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||  ||||||||| |||| || || |||||||||||| || ||  |||||||||||||||    
T  51614662 ttataactaaaaagtccaaatcacacattgaggtgtggattgctaaaagaaacttttttggatggcttctagc 51614590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 2911652 - 2911699
Alignment:
Q  133 aaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttc 180  Q
    ||||||||||||||||| || | || ||||||||||||||||||||||    
T  2911652 aaaagtgaaaatcacacattaaggtgtgaattgctaaaagacaccttc 2911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 5232783 - 5232700
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || ||||||| ||||||||| | ||| |||||||||||||| ||  |||||||| ||||| | |||||||    
T  5232783 tatatgggttttgctacaagacacattttatgaaggtgtcatttagcaagttattctagaagcatttgttaaaagacaccaact 5232700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 6125873 - 6125948
Alignment:
Q  121 aagttataactaaaaa-gtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||| ||| | ||||||||||||| || | | ||||||||| ||||||||||||||| ||||||    
T  6125873 aagttataactaaaaaagtggataatcacaccttgaggtgtaagttgctaaaaaacaccttcatggatgacttcta 6125948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 19855571 - 19855640
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||   || || || ||||||||||||||||||||  | |||||||||||    
T  19855571 ttataactaaaaagtggaaatcacac---gaggtgtggattgctaaaagacaccttcagaggtggcttctagc 19855640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 4126004 - 4126040
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  4126004 gtcttttaacaagttattctatgagcatttgctaaaa 4126040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 5232671 - 5232595
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||| ||||||||||||  ||||||||||| | || ||  |||||||||||||| || || |||| ||||||||    
T  5232671 aaagttacaactaaaaagtgggaatcacaccttaaggtgtgggttgctaaaagacacatttatagatgacttctagc 5232595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 11238697 - 11238733
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||| |||||||||||| |||||    
T  11238697 gtcttttagcaagttattctatgagcatttgttaaaa 11238733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 19228596 - 19228640
Alignment:
Q  73 cttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||| |||||||||||||||||| | |||||||    
T  19228596 cttttagcaaattattctatgagcatttgctaaaagacaccaact 19228640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 35280439 - 35280475
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||| |||||||||||| |||||    
T  35280439 gtcttttagcaagttattatatgagcatttgttaaaa 35280475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 46354034 - 46354082
Alignment:
Q  59 ttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||| |||||||| ||||||||||||| || ||||| |||||    
T  46354034 ttttatgaaagtgtcttttaacaagttattttataagtatttgttaaaa 46354082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 17347100 - 17347024
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  17347100 aaagttataactaaaaagtggaaatcacaccttaaagtatggattgctaaaaaacaccttcatggatggcttctagc 17347024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 6322592 - 6322668
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||| |||||||| | || || |||||||||||||||||||||||||||||||||||    
T  6322592 aaagttataactaaaaagtggaaaccacaccttaaggtgtggattgctaaaagacaccttcatggatggcttctagc 6322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 15081223 - 15081299
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  15081223 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 15081299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 19143673 - 19143743
Alignment:
Q  125 tataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||| |||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||    
T  19143673 tataactaaaaagtggaaatcacaccttgaggtatggatttctaaaagaaaccttcatggatggcttctag 19143743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 12159502 - 12159438
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    ||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||    
T  12159502 aaagttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgg 12159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 10075095 - 10075169
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||| ||||||||| |||||||||||||| || ||| ||||||||||||||||| |||| |||||||||    
T  10075095 aaagttataattaaaaagtggaaatcacaccttgaggtgtgagttgctaaaagacacctttatgggtggcttcta 10075169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 18102549 - 18102623
Alignment:
Q  122 agttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| || ||||||||    
T  18102549 agttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtgacttctagc 18102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 29427288 - 29427212
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || |||||||||| |||| || |||| |||||||||||    
T  29427288 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaaaacacatttatggctggcttctagc 29427212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 10074994 - 10075069
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||||||  ||||| ||||| | |||||||    
T  10074994 ttttgctagaagacaccttttatgaaagtgtcttttaacaagttattttatgaatatttgttaaaagacaccaact 10075069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 7190698 - 7190774
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| ||||||| |||||||||||||||| | || ||  |||||||||||||||||||||  |||||||||||    
T  7190698 aaagttatgactaaaaggtgaaaatcacaccttaaggtgtggtttgctaaaagacaccttcatgagtggcttctagc 7190774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 14975456 - 14975384
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||| |||||||||| ||||| | || ||  |||||||||||||||||||||| |||||||||||    
T  14975456 ttataactaaaaggtgaaaatcataccttaaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 14975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 18096331 - 18096407
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||| ||||| |||| | |||||||||||||||||| |||||||||||| ||||| | |||||||    
T  18096331 gttttgctagaagacatcttttgtgaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaact 18096407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 17347200 - 17347126
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||| |||||||||| ||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  17347200 tttgctagaagacacattttatgaaggtgtcttttagcaagttattatattagcatttgttaaaagacaccaact 17347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 18096429 - 18096485
Alignment:
Q  122 agttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacct 178  Q
    |||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||    
T  18096429 agttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacacct 18096485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 12159595 - 12159544
Alignment:
Q  50 gaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||||||||||||||| | |||||||||||||||||| ||| ||||||||    
T  12159595 gaagacaccttttatgaaggtgtcttttagcaagttattatattagcatttg 12159544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 19102117 - 19102062
Alignment:
Q  141 aaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||| || || |||||||||||||||||||||| ||| ||||||||    
T  19102117 aaatcacaccttgaggtgtggattgctaaaagacaccttcatgtatgacttctagc 19102062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 15081138 - 15081187
Alignment:
Q  58 cttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  15081138 cttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 15081187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 19104406 - 19104360
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||| |||||||||||||||||| ||||| | |||||||    
T  19104406 gtcttttagcaaattattttatgagcatttgttaaaagacaccaact 19104360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 18102451 - 18102527
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||| | |||||  ||| | || ||||||||||||||| |||||||||||| ||||| | |||||||    
T  18102451 gttttgctagaagatatcttttgcgaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaact 18102527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 28295594 - 28295650
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    ||||||||||| |||||||| | |||||||||||| || ||  ||||||||||||||    
T  28295594 aaagttataaccaaaaagtggatatcacaccttgaggtgtggcttgctaaaagacac 28295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 28516479 - 28516423
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    ||||||||||| |||||||| | |||||||||||| || ||  ||||||||||||||    
T  28516479 aaagttataaccaaaaagtggatatcacaccttgaggtgtggcttgctaaaagacac 28516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28589294 - 28589218
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||||||||||    
T  28589294 aaagttataactaaaaagtgaaaatcacaccttgaggtatggattgttaaaagacaccttcatgggtggcttctagc 28589218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 32868087 - 32868163
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || ||| |||||||| ||||||||||||||||||||||    
T  32868087 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattactaaaagataccttcatggatggcttctagc 32868163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 34041249 - 34041173
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||| ||||| || ||  ||||||||||||||||||||||||||||||||||    
T  34041249 aaagttataactaaaaagtgaaaatcacaacttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 34041173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 32090020 - 32089944
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||||| || || ||  ||||||||||||| ||||||||||||||||||||    
T  32090020 aaagttataactaaaaagtgaaaatcacacctcgaggtgtgggttgctaaaagacatcttcatggatggcttctagc 32089944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 32626119 - 32626043
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  32626119 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 32626043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 34728277 - 34728201
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  34728277 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 34728201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 42434286 - 42434210
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || | ||||||||||||| ||||||| |||||||||||    
T  42434286 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggaatgctaaaagacactttcatgggtggcttctagc 42434210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 51702457 - 51702533
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||    
T  51702457 gttttgctagaagacacctcttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaagaaaccaact 51702533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 38963400 - 38963335
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  38963400 ttttgctagaagacaccttttatgaatgtgtcttttagcaagttattctatgagcatttgctaaaa 38963335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 6137362 - 6137438
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||| |||| || ||| |||||||||||||||||||||  |||||||||||    
T  6137362 aaagttataactaaaaagtggaaatcacacattgaggtgtgagttgctaaaagacaccttcatgagtggcttctagc 6137438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 34728379 - 34728303
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||| | |||||||    
T  34728379 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctataagcatttgctaaaagacaccaact 34728303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 40479949 - 40480025
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |  ||| |||||||||||||||||||||| || ||||||||    
T  40479949 aaagttataactaaaaagtggaaatcacaccttgaggcgtgagttgctaaaagacaccttcatgggtgacttctagc 40480025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 43837747 - 43837671
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| | ||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  43837747 aagttataactaaaaagtggataatcacaccttgaggtgtggattgctaaaagacaccttcatgggtggcttctagc 43837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 51682616 - 51682540
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||  |||||||||||    
T  51682616 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgagtggcttctagc 51682540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 52719168 - 52719240
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||| |||||||| | | ||||||||||||| |||||| |||||||||||||    
T  52719168 ttataactaaaaagtgaaaatcacatcttgaagtgtaagttgctaaaagacatcttcatagatggcttctagc 52719240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 32626211 - 32626145
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  32626211 aagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 32626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 40875314 - 40875388
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||||| ||||| | || ||  ||||||||||||||||| ||||||||||||||    
T  40875314 aaagttataactaaaaagtgaaaatcaaaccttaaggtgtgggttgctaaaagacacctttatggatggcttcta 40875388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 6137260 - 6137336
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  6137260 gttttgctagaagacaccttttatgaatgtgtcttttagcaagttattctattagcatttgttaaaagacaccaact 6137336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 13386984 - 13387060
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| |||||| || | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  13386984 gttttgctagaagacacattttataaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 13387060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 20835809 - 20835885
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || ||||||| |||||| || ||  |||||||||||||||||||||| |||||||||||    
T  20835809 aaagttataactaaaaaatggaaatcaccccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 20835885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 27907092 - 27907168
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||   ||||||||||||||||||||| |||||| ||||    
T  27907092 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggctgctaaaagacaccttcatgggtggcttatagc 27907168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 32090122 - 32090046
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||| |||||||||| | |||||||||||||||||||||| |||||||| ||||| | |||||||    
T  32090122 gttttgctagaagacatcttttatgaaggtgtcttttagcaagttattttattagcatttgttaaaagacaccaact 32090046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 38427228 - 38427152
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| ||| | |||||| ||||| | |||||||    
T  38427228 gttttgctagaagacaccttttatgaaagtgtcttttagcaagttattctattaacatttgttaaaagacaccaact 38427152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 42434388 - 42434312
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||||| ||| | || ||||||||||||||| |||||||||||| ||||| | |||||||    
T  42434388 gttttgttagaagacaccttttaggaaggtgttttttagcaagttattctatgagcatttgttaaaagacaccaact 42434312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 48860882 - 48860806
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||||||||| || | |||||||||||||||||| |||||||||||| ||||| | |||||||    
T  48860882 gttttgctagaagacaccttttataaaggtgtcttttagcaagttattctatgagcatttgttaaaagacaccaact 48860806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 51702559 - 51702635
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||   |||||||||||    
T  51702559 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcataagtggcttctagc 51702635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 20835700 - 20835783
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || ||||||||||||||||| | |||||||||||||||||| ||| |||||||| ||||| | |||||||    
T  20835700 tatatgggttttgctataagacaccttttatgaaggtgtcttttagcaagttattctattagcatttgttaaaagataccaact 20835783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 19329462 - 19329536
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||||||||||| ||||| ||||||||||||||    
T  19329462 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagagacctttatggatggcttcta 19329536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 48860783 - 48860709
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||| || |||||| |||||||  | ||||||||||||| ||||||||||||||| ||||||    
T  48860783 aaagttataactaaaaaatggaaatcaaaccttgagatgtgaattgctaaaaaacaccttcatggatgacttcta 48860709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 7645939 - 7645863
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||||||||    ||  |||||||||||||| ||||| | |||||||||||    
T  7645939 aaagttataactaaaaagtgaaaatcacaccttgagccgtgggttgctaaaagacacattcattggtggcttctagc 7645863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 20503535 - 20503611
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |  ||  ||||||||| |||||||||||  |||||||||||    
T  20503535 aaagttataactaaaaagtggaaatcacaccttgaggcgtgggttgctaaaaaacaccttcatgagtggcttctagc 20503611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 47960352 - 47960276
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| || | |||| |||||||| || |||||||||||||||||| |||||||||| ||||||||    
T  47960352 aagttataactaaaaaatggataatctcaccttgaggtgtgaattgctaaaagacactttcatggatgacttctagc 47960276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 47960454 - 47960378
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||  |||  ||||||||||||| | |||||||    
T  47960454 gtttggttagaagacaccttttatgaaggtgtcttttagcaagttatcctataggcatttgctaaaagacaccaact 47960378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 13387969 - 13388024
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacctt 179  Q
    |||||||||||||||| | |||||||||||| |||||| |||||||||||||||||    
T  13387969 ttataactaaaaagtggatatcacaccttgaggtatgacttgctaaaagacacctt 13388024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 11020507 - 11020441
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||| ||||||||||||||||| | || ||||||||||||||| ||||| |||||| |||||    
T  11020507 gttttgttaaaagacaccttttatgaaggtgtgttttagcaagttattctatgaacatttgttaaaa 11020441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 33117511 - 33117580
Alignment:
Q  38 tgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||| ||||||| |||||||||||| | || |||||||||| |||| ||||| ||||||||||||    
T  33117511 tgagttttgctagaagataccttttatgaaggtgtattttagcaagatattctatgatcatttgctaaaa 33117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38427126 - 38427053
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||| | || ||  |||||  ||||||| |||||||||||||||||||    
T  38427126 aaagttataactaaaaagtgaaaatcacaccttaaggtgtg-gttgct--aagacactttcatggatggcttctagc 38427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 53773742 - 53773681
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttca 181  Q
    |||||||||||||||||| || |||||||||||||||| |  ||||||||||||||||||||    
T  53773742 aagttataactaaaaagttgataatcacaccttgaagtgttgattgctaaaagacaccttca 53773681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 20503433 - 20503509
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| ||||||||||||| | || |||||||||| |||| ||||| |||||||||||| | |||||||    
T  20503433 gttttgctagaaggcaccttttatgaaggtgttttttagcaagatattctatgatcatttgctaaaagacaccaact 20503509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 34041353 - 34041285
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| |||||||||| ||||||||| | |||||||||||||||| | ||| |||||||| |||||    
T  34041353 gagttttgctagaagacacattttatgaatgtgtcttttagcaagttactctataagcatttgttaaaa 34041285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38792324 - 38792248
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||| |||| |||||||||  ||||  ||||||||| ||||||| || |||||||||||||    
T  38792324 aaagttataactaaaaggtggaaattacaccttgagatatgggttgctaaaaaacacctttattgatggcttctagc 38792248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 38962507 - 38962571
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    |||||||||| |||||||||||||||||||||||| || ||  ||| ||||| ||||||||||||    
T  38962507 aaagttataaataaaaagtgaaaatcacaccttgaggtgtgggttgttaaaaaacaccttcatgg 38962571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 43837849 - 43837773
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | ||| |||||||||||||  |||  ||||||||||||| | |||||||    
T  43837849 gttttgctagaagacaccttttatgaaggtgtcgtttagcaagttatcctataggcatttgctaaaagacaccaact 43837773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 51682718 - 51682642
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||| |||||||||||||| | || ||||||||||||||| ||||| |||||| ||||| | |||||||    
T  51682718 gttttgctagaaaacaccttttatgaaggtgttttttagcaagttattctatgaacatttgttaaaagacaccaact 51682642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 5975657 - 5975716
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||||| ||| ||||||||    
T  5975657 ttttgctagaagacacattttatgaaggtgtcttttagcaagttattatattagcatttg 5975716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 16467214 - 16467134
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagt----atgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| ||    ||| |||||||||| || ||||||| | |||||| ||||    
T  16467214 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggatggattgctaaaaaacgccttcataggtggcttatagc 16467134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 22254216 - 22254299
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||  ||||||||| | |||||||||||||||||| |||  ||||||| ||||| | |||||||    
T  22254216 tatatgggttttgctagaagacattttttatgaaggtgtcttttagcaagttattctattggcatttgttaaaagacaccaact 22254299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 11020405 - 11020347
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacct 178  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||||||||||||||||    
T  11020405 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagacacct 11020347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 54158117 - 54158163
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||    
T  54158117 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 54158163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 6944617 - 6944568
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaa 169  Q
    |||||||||||||||||||| |||||||||||| | || |||||||||||    
T  6944617 aaagttataactaaaaagtggaaatcacaccttaaggtgtgaattgctaa 6944568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 6944698 - 6944654
Alignment:
Q  62 tatgaaagcgtcttttagcaagttattttatgagcatttgctaaa 106  Q
    |||||| | |||||||||||||||||| |||||||||||||||||    
T  6944698 tatgaaggtgtcttttagcaagttattctatgagcatttgctaaa 6944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 33117616 - 33117692
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||  ||||| || | || ||  || ||||||||||||||||||  |||||||||||    
T  33117616 aaagttataactaaaaagtgaaatgcacactttaaggtgtgggtttctaaaagacaccttcatgagtggcttctagc 33117692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 38963343 - 38963311
Alignment:
Q  163 ttgctaaaagacaccttcatggatggcttctag 195  Q
    |||||||||||||||||||||||||||||||||    
T  38963343 ttgctaaaagacaccttcatggatggcttctag 38963311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 13387088 - 13387143
Alignment:
Q  122 agttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacc 177  Q
    |||||||||||||| |||||||||||||||||| || ||  ||| |||||||||||    
T  13387088 agttataactaaaatgtgaaaatcacaccttgaggtgtgtgttgttaaaagacacc 13387143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 13372402 - 13372448
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||  ||||||||||||||||| | |||||||    
T  13372402 gtcttttagcaagttattccatgagcatttgctaaaagacaccaact 13372448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 13382603 - 13382649
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||  ||||||||||||||||| | |||||||    
T  13382603 gtcttttagcaagttattccatgagcatttgctaaaagacaccaact 13382649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 32868015 - 32868061
Alignment:
Q  71 gtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||| ||||||||| |||||||||||||||||| | |||||||    
T  32868015 gtcttttaacaagttattctatgagcatttgctaaaagacaccaact 32868061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 13372474 - 13372550
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| |||||||| |||||| ||||||| || |   ||| |||||||||||||||||  ||| |||||||    
T  13372474 aaagttataacaaaaaagtggaaatcataccttgaggtgtaggttgttaaaagacaccttcatgtgtggtttctagc 13372550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 13382675 - 13382751
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| |||||||| |||||| ||||||| || |   ||| |||||||||||||||||  ||| |||||||    
T  13382675 aaagttataacaaaaaagtggaaatcataccttgaggtgtaggttgttaaaagacaccttcatgtgtggtttctagc 13382751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 38962407 - 38962483
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||| ||| || ||||||| | |||||||||||||| | ||||| |||||||| ||||| | |||||||    
T  38962407 gttttgctagaatacaactattatgaaggtgtcttttagcaagtcactttataagcatttgttaaaagacaccaact 38962483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 5995215 - 5995132
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||    
T  5995215 tatatgggttttgctagaagacaccttttatgaaagtgtcttttagcaagttattatatgagcatttgctaaaagacaccaact 5995132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 26928018 - 26927942
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||| |||||||||||    
T  26928018 aaagttataactaaaaagtggaaatcacaccttgaggtgtgagttgctaaaagacaccttcatgggtggcttctagc 26927942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3203336 - 3203264
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||| || ||  |||||||||||||||||||||||||| |||||||    
T  3203336 ttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggtttctagc 3203264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 9522519 - 9522443
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || |||||||| |||||||||||||| |||||||||||    
T  9522519 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaagagacaccttcatgggtggcttctagc 9522443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 21993572 - 21993648
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || ||  ||||||||||||| |||||||| |||||||||||    
T  21993572 aaagttataactaaaaagtgaaaatcacaccttgaggtgtgggttgctaaaagacaacttcatgggtggcttctagc 21993648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 41378424 - 41378348
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  41378424 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 41378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 48227284 - 48227208
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||||| ||  |||||||||||||||||||||  |||||||||||    
T  48227284 aaagttataactaaaaagtggaaatcacaccttgaagtgtgggttgctaaaagacaccttcatgagtggcttctagc 48227208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 24611518 - 24611594
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||| |||| || ||  |||||||||||||||||||| | |||||||||||    
T  24611518 aaagttataactaaaaagtgaaaatcacacattgaggtgtgggttgctaaaagacaccttcataggtggcttctagc 24611594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28333816 - 28333740
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || |   |||||||||||||||||||||  |||||||||||    
T  28333816 aaagttataactaaaaagtgaaaatcacaccttgacgtgttggttgctaaaagacaccttcatgagtggcttctagc 28333740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 41585928 - 41585856
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  41585928 ttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 41585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 35983209 - 35983284
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||||||||||||||||||||| | || ||  |||||||||||||||||||| | ||||||||||    
T  35983209 aaagttataactaaaaagtgaaaatcacaccttaaggtgtgggttgctaaaagacaccttcataggtggcttctag 35983284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 36004621 - 36004696
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||||||||||||||||||||| | || ||  |||||||||||||||||||| | ||||||||||    
T  36004621 aaagttataactaaaaagtgaaaatcacaccttaaggtgtgggttgctaaaagacaccttcataggtggcttctag 36004696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 41037227 - 41037303
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  ||| ||||||||||||||||||||| ||||||||    
T  41037227 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgttaaaagacaccttcatggatgacttctagc 41037303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 3961178 - 3961253
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  3961178 ttttgctagaagacacattttatgaaagtgtcttttagcaagttattctatgatcatttgttaaaagacaccaact 3961253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 28059383 - 28059313
Alignment:
Q  37 atgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaac 108  Q
    |||||||||| |||||||||||||||||||| |  |||||||| |||||||| |||||||||||||||||||    
T  28059383 atgagttttgctagaagacaccttttatgaagga-tcttttaggaagttattctatgagcatttgctaaaac 28059313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 35983107 - 35983173
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| |||||||||   |||||||||||||||||| ||||||||||||||||||    
T  35983107 gttttgctagaagacacattttatgaagatgtcttttagcaagttattctatgagcatttgctaaaa 35983173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 36004519 - 36004585
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| |||||||||   |||||||||||||||||| ||||||||||||||||||    
T  36004519 gttttgctagaagacacattttatgaagatgtcttttagcaagttattctatgagcatttgctaaaa 36004585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 46003785 - 46003711
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||| ||||||| |  | ||| |||||||||||||| ||||||| |||||||||    
T  46003785 aaagttataactaaaaagtgaaaattacaccttaagatgtgacttgctaaaagacacattcatgggtggcttcta 46003711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 5995102 - 5995029
Alignment:
Q  124 ttataactaaaaa-gtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||| ||| |||||||||||||| || |  |||||||||||||||||||||||||| ||||||||    
T  5995102 ttataactaaaaaagtgtaaatcacaccttgaggtgtagattgctaaaagacaccttcatggatgacttctagc 5995029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 3203446 - 3203386
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||| ||||||| |||||||||||| | |||||||||||||||||| ||||||||||||    
T  3203446 gttttgctagaagataccttttatgaaggtgtcttttagcaagttattctatgagcatttg 3203386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 14656556 - 14656632
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||||||||| |||| || ||  || ||||||||||||||||||  |||||||||||    
T  14656556 aaagttataactaaaaggtgaaaatcacacattgaggtgtgggtttctaaaagacaccttcatgagtggcttctagc 14656632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 20009234 - 20009159
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| ||||||||||| ||| |||||  |||||||||||    
T  20009234 aaagttataactaaaaagtaaaaatcacatcttgaggtatgagttgctaaaagaaacc-tcatgagtggcttctagc 20009159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 27131099 - 27131175
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||| || ||||||||||||| || || ||||||||||||||||||||||  || ||||||||    
T  27131099 aagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgtgtgtcttctagc 27131175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 41037127 - 41037191
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||||||| | ||||||||| || ||||| |||||||||||| |||||    
T  41037127 tttgttagaagacaccttttatgaaggtgtcttttagtaaattattctatgagcatttggtaaaa 41037191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 27130990 - 27131073
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| ||||||||||| |||||||| | || |||||||||||||| ||||  ||||||||||||| | |||||||    
T  27130990 tatatgggttttgctagaagacaccctttatgaaggtgttttttagcaagttatcttataggcatttgctaaaagacaccaact 27131073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 31953159 - 31953225
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||| |||||||||||||| | |||||||||||||||| | |||||||||||| |||||    
T  31953159 gttttgctagaacacaccttttatgaaggtgtcttttagcaagttagtctatgagcatttgttaaaa 31953225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 32392287 - 32392214
Alignment:
Q  124 ttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| | |||| |||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  32392287 ttataactaaaaagtggataatctcaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 32392214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 31953261 - 31953337
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||| || ||||||  ||| |||||||    
T  31953261 aaagttataactaaaaagtggaaatcacaccttgaggtgtgtgttgctaaaagatacattcatgagtggtttctagc 31953337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 48227386 - 48227310
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| | |||||||||||||||||| | || |||||||||| |||| ||||| |||||||||||| | |||||||    
T  48227386 gttttgctggaagacaccttttatgaaggtgtattttagcaagatattctatgatcatttgctaaaagacaccaact 48227310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 8953341 - 8953274
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgct-aaaagacaccttcatggat 186  Q
    |||||||||||||||||| || ||||||||||||| || ||||||||| |||| ||||||||||||||    
T  8953341 aagttataactaaaaagttgataatcacaccttgatgtgtgaattgctaaaaaaacaccttcatggat 8953274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 21993471 - 21993546
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||||| ||| |||||||  ||||| | |||||||    
T  21993471 ttttgctagaagacacattttatgaaggtgtcttttagcaagttattctattagcattttttaaaagacaccaact 21993546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 35221717 - 35221642
Alignment:
Q  121 aagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||  ||||  |||||||| || ||  |||||||||||||||||||| | |||||||||||    
T  35221717 aagttataactaaaaagtagaaatttcaccttgaggtgtgggttgctaaaagacaccttcattggtggcttctagc 35221642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 45099964 - 45100047
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||| ||||||||| | || ||||| |||||||||  ||||||||||| ||||| | |||||||    
T  45099964 tatatgggttttgctagaagacacattttatgaaggtgttttttaacaagttattcaatgagcatttgttaaaagacaccaact 45100047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 3961283 - 3961353
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||| ||||||| ||| ||||| || ||  |||||||||||||||||||||| || ||||||    
T  3961283 ttataactaaaaattgaaaatgacatcttgaggtgtgggttgctaaaagacaccttcatgggtgacttcta 3961353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 14313952 - 14313998
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||||||||||| |||||||||||| | |||||||||||||||||    
T  14313952 gttttgttagaagataccttttatgaaggtgtcttttagcaagttat 14313998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 31853769 - 31853823
Alignment:
Q  128 aactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttca 181  Q
    |||||||||||| | |||||||||||||||| || ||||||||||||||||||||    
T  31853769 aactaaaaagtggataatcacaccttgaagtgtggattgctaaaagacaccttca 31853823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 41378526 - 41378460
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| |||||| || | || ||||||||||||||| ||||| ||||||||||||    
T  41378526 gttttgctagaagacactttttattaaggtgttttttagcaagttattctatgaacatttgctaaaa 41378460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 3875102 - 3875155
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||| |||||||||| ||||||||||| || ||||||||||||||    
T  3875102 tatatgggttttgctagaagacacattttatgaaagtgtattttagcaagttat 3875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 38368167 - 38368236
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||||||||| | ||||||||||||| |||  ||| | |||||||||||| | |||||||    
T  38368167 tagaagacaccttttatgaatgtgtcttttagcaagatatcatattaacatttgctaaaagacaccaact 38368236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 26928584 - 26928544
Alignment:
Q  77 tagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  26928584 tagcaagttattttatgagcatttgctaaaagacaccaact 26928544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 32392331 - 32392287
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagtt 85  Q
    |||||| |||||||||||||||||||| | |||||||||||||||    
T  32392331 gttttgctagaagacaccttttatgaaggtgtcttttagcaagtt 32392287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 36343104 - 36343168
Alignment:
Q  132 aaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| |||||||| ||||| || ||  ||||||||| ||||||||||||||| ||||||||    
T  36343104 aaaaagtggaaatcacatcttgaggtgtgggttgctaaaaaacaccttcatggatgacttctagc 36343168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 46003893 - 46003821
Alignment:
Q  36 tatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatg-agcatttgctaaaa 107  Q
    |||| |||||| |||||||||| ||| ||||| | |||||||||||||||| | |||| ||||||||||||||    
T  46003893 tatgggttttgctagaagacacatttcatgaaggtgtcttttagcaagttactctatgaagcatttgctaaaa 46003821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 7596929 - 7596870
Alignment:
Q  124 ttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    |||||||||||||||| | |||||||| |||| || ||||||| ||||||||||||||||    
T  7596929 ttataactaaaaagtggataatcacacattgaggtgtgaattgttaaaagacaccttcat 7596870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 3875241 - 3875314
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||| |||||||| || ||||||||||||| ||||| |||| |||||||||| ||||||| || ||||||    
T  3875241 aagttataa-taaaaagttgataatcacaccttgaggtatggattgttaaaagacactttcatgggtgtcttcta 3875314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 42373613 - 42373567
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | |||||||||||| ||||    
T  42373613 gttttgctagaagacaccttttatgaatgtgtcttttagcaaattat 42373567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 45100073 - 45100135
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||| |||||||||||| |||||||| ||||| |  ||  ||||||||||||||||||||    
T  45100073 aaagttacaactaaaaagtgtaaatcacatcttgaggcgtgggttgctaaaagacaccttcat 45100135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 12362989 - 12362940
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt 88  Q
    ||||| |||||||||||||| |||||||| | |||||||| |||||||||    
T  12362989 gagttctgttagaagacaccctttatgaatgtgtcttttaacaagttatt 12362940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 20418026 - 20417981
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||| |||||||||||||||||||| | |||||||||||| ||||    
T  20418026 ttttgctagaagacaccttttatgaatgtgtcttttagcaaattat 20417981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 35221827 - 35221778
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt 88  Q
    |||||||| ||||||| || ||||||||| | ||||||||||||||||||    
T  35221827 gagttttgctagaagatactttttatgaaggtgtcttttagcaagttatt 35221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3350063 - 3349991
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||||||||||  | ||  ||||||||| |||| || || | |||||||||||    
T  3350063 ttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaaaacacttttataggtggcttctagc 3349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 9522618 - 9522542
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| |||||||||   |||||||||||||||| | || ||| |||| |||||| | |||||||    
T  9522618 gttttgctagaagacacattttatgaagatgtcttttagcaagttaatctacgaggatttcctaaaagacaccaact 9522542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 43077648 - 43077604
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagtt 85  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  43077648 gttttgctagaagacaccttttatgaaggtgttttttagcaagtt 43077604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 28038369 - 28038286
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  28038369 tatatgggttttgctagaagacacattttatgaaagtgtcttttagcaagttattctatgagcatttgctaaaacacaccaact 28038286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 23204479 - 23204555
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||| |||||||||||    
T  23204479 aaagttataactaaaaagtggaaatcacaccttgaggtgtgacttgctaaaagacaccttcatgggtggcttctagc 23204555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 17689395 - 17689319
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||| | || || |||||||||||||||||| |||| |||||||||||    
T  17689395 aaagttataactaaaaagtgaaaatcacaccttaaggtgtggattgctaaaagacaccttaatgggtggcttctagc 17689319  T

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Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 19995378 - 19995454
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || ||||||||||||| ||||||||| |||||||||||    
T  19995378 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagaccccttcatgggtggcttctagc 19995454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 37172450 - 37172384
Alignment:
Q  118 gaaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    ||||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  37172450 gaaaaattataactaaaaagtgaaaatcacaccttaaggtatggattgctaaaagacaccttcatgg 37172384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 18015745 - 18015821
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||| |||||||| |||||||||||    
T  18015745 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacatcttcatgggtggcttctagc 18015821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28813114 - 28813038
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||  |||||||||||    
T  28813114 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgagtggcttctagc 28813038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38758677 - 38758601
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||||||||  | ||  |||||||||||||||||||||  |||||||||||    
T  38758677 aaagttataactaaaaagtgaaaatcacaccttgagatgtgggttgctaaaagacaccttcatgagtggcttctagc 38758601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 27365716 - 27365782
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  27365716 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 27365782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9741828 - 9741904
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||||||||  | ||  |||||||||||||||||||||  |||||||||||    
T  9741828 aaagttataactaaaaagtggaaatcacaccttgagatgtgggttgctaaaagacaccttcatgagtggcttctagc 9741904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 16490975 - 16490899
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||| ||| || ||  |||||||||||||    
T  16490975 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaaatacatctccagcgatggcttctagc 16490899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 38758778 - 38758701
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga 119  Q
    |||||| |||||||||| ||||||||| | |||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  38758778 gttttgctagaagacacattttatgaaggtgtcttttagcaagttattctatgagca-ttgctaaaagacaccaactga 38758701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 20269235 - 20269300
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| ||||||||| |||||||||| | |||||||||||||||||| ||||| ||||||||||||    
T  20269235 ttttgctagaagacagcttttatgaaggtgtcttttagcaagttattctatgaacatttgctaaaa 20269300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 23204370 - 23204443
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||| ||||||||| |||||||||| | |||||||| ||||||||| |||||||||||| |||||    
T  23204370 tatatgggttttgctagaagacatcttttatgaaggtgtcttttaacaagttattctatgagcatttgttaaaa 23204443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 9741726 - 9741802
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | |||||||| ||| ||||| |||||||||||||||||| | |||||||    
T  9741726 gttttgctagaagacacattttatgaaggtgtcttttaacaaattattctatgagcatttgctaaaaaacaccaact 9741802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 38293534 - 38293458
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||| ||| || || |||| ||||||||| |||||||| |||||| ||||    
T  38293534 aaagttataactaaaaagtggaaatcacaccatgaggtgtggattgttaaaagacatcttcatggctggcttatagc 38293458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 27365818 - 27365892
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||| || ||||||||||||| || || |||||||||| |||||||||||| || ||||||    
T  27365818 aagttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaaaacaccttcatgggtgtcttcta 27365892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 33429300 - 33429238
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgct 103  Q
    |||||| |||||||||| ||||||||| | | |||||||||||||||| ||||||||||||||    
T  33429300 gttttgctagaagacacattttatgaaggtgccttttagcaagttattctatgagcatttgct 33429238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 37172543 - 37172474
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||||| | |||||||| ||||||||| || ||||||||||||||| | |||||||    
T  37172543 tagaagtcaccttttatgaaggtgtcttttaacaagttattctacgagcatttgctaaaagacaccaact 37172474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 16994297 - 16994221
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | ||  |||||||||||||| |||||||||||| ||||| | |||||||    
T  16994297 gttttgctagaagacacattttatgaaggtgttgtttagcaagttattctatgagcatttgttaaaagacaccaact 16994221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 41283205 - 41283269
Alignment:
Q  132 aaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| |||||||| ||||| || ||| |||||||||||||| |||||||||| ||||||||    
T  41283205 aaaaagtggaaatcacatcttgatgtgtgagttgctaaaagacacattcatggatgacttctagc 41283269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 16273728 - 16273657
Alignment:
Q  36 tatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||| |||||| ||||||||||| |||||||| | ||||||||||||||||| ||||   ||||||||||||    
T  16273728 tatgggttttgctagaagacaccctttatgaaggtgtcttttagcaagttatcttatagacatttgctaaaa 16273657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 19325167 - 19325120
Alignment:
Q  70 cgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||    
T  19325167 cgtcttttagcaagttattctatgagcatttgctaaaagaaaccaact 19325120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 17689496 - 17689430
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||| |||||| ||   ||||||||| | |||||| ||||||||||||||||||    
T  17689496 gttttgttagaagacacattttataaagatgtcttttagtaggttattctatgagcatttgctaaaa 17689430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 19323858 - 19323812
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||    
T  19323858 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttat 19323812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 21913904 - 21913838
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||||||||| |||||||| | |||||||||||||||||  |||  |||||||||||||    
T  21913904 gttttgctagaagacaccctttatgaaggtgtcttttagcaagttatcctataggcatttgctaaaa 21913838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 15978804 - 15978879
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| ||| |||||| ||||||||| | |||||||||||| ||| | |||||| ||||||||||| | |||||||    
T  15978804 ttttggtaggagacacattttatgaaggtgtcttttagcaaattaatctatgagtatttgctaaaagacaccaact 15978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 18015637 - 18015719
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||| |||||||| |||||| | ||||||||||||||||||  |||| |||||| ||||| | |||||||    
T  18015637 tatatgggttttgctaga-gacaccttatatgaaggtgtcttttagcaagttattgcatgaacatttgttaaaagacaccaact 18015719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 19863164 - 19863089
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    |||||| |||||||||||| | |||||||| ||||  | || ||||||||||||||||||||||| ||| ||||||    
T  19863164 aagttaaaactaaaaagtggataatcacactttgagatgtggattgctaaaagacaccttcatgggtggtttctag 19863089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 5807067 - 5807021
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||||||| |||||| || || ||||||||||||||||    
T  5807067 gttttgttagaagacactttttataaatgcatcttttagcaagttat 5807021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 25593294 - 25593356
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||||||||||||||| | ||| ||||||| | || ||| ||||||||||||||||||||    
T  25593294 aagttataactaaaaagtggataattacaccttaaggtgtgagttgctaaaagacaccttcat 25593356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 43127015 - 43126949
Alignment:
Q  35 atatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttg 101  Q
    |||||||||||| ||||||| | ||||||| |||| || |||||||||||||| |||| | ||||||    
T  43127015 atatgagttttgctagaagatatcttttataaaagtgttttttagcaagttatcttataaacatttg 43126949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 19323941 - 19323908
Alignment:
Q  159 tgaattgctaaaagacaccttcatggatggcttc 192  Q
    ||||||||||||||||||||| ||||||||||||    
T  19323941 tgaattgctaaaagacacctttatggatggcttc 19323908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 31042674 - 31042605
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||| |||||||| | || |||||||||||||| ||||  ||||||| ||||| | |||||||    
T  31042674 tagaagacaccctttatgaaggtgtattttagcaagttatcttataggcatttgttaaaagacaccaact 31042605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 31056530 - 31056485
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagtta 86  Q
    |||||| |||||||||||||||||||| | || |||||||||||||    
T  31056530 gttttgctagaagacaccttttatgaaggtgtattttagcaagtta 31056485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 1838824 - 1838741
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||| | |||||||    
T  1838824 tatatgagttttgttagaagacacattttatgaaagtgtcttttagtaagttattctatgagcatttgctaaaagacaccaact 1838741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 25825352 - 25825276
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  25825352 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 25825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 25825454 - 25825388
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  25825454 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttattttatgagcatttgttaaaa 25825388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 42470603 - 42470669
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggat 186  Q
    |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  42470603 aaagttataactaaaaagtggaaatcacaccttgaggtgtgaattgctaaaagacaccttcatggat 42470669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 24992919 - 24992843
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  24992919 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 24992843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 26284561 - 26284485
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || |||| ||||||||| |||||||| |||||||||||    
T  26284561 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgttaaaagacatcttcatgggtggcttctagc 26284485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 44720167 - 44720243
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||| ||| |||||||||    
T  44720167 aaagttataactaaaaagtgaaaatcacaccttaaggtgtgagttgctaaaagacaccttcatagattgcttctagc 44720243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 43939502 - 43939432
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||  |||||||||    
T  43939502 ttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaaagacaccttcatgagtggcttcta 43939432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 4105606 - 4105682
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |||||| |||  |||||||    
T  4105606 aaagttataactaaaaagtgaaaatcacacattaaggtatgaattgctaaaagacactttcatgtatgatttctagc 4105682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 8549616 - 8549540
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| | || ||||||||    
T  8549616 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaaatacaccttcataggtgacttctagc 8549540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 1469751 - 1469673
Alignment:
Q  118 gaaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||| ||||||||||||||| |||||||||||||| || ||  |||||||||||||| ||||||| |||||||||||    
T  1469751 gaaaagctataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacacattcatgggtggcttctagc 1469673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 1838715 - 1838638
Alignment:
Q  119 aaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||| ||||||||| |||| || ||  |||||||||||||||||||||  |||||||||||    
T  1838715 aaaagttataactaaaaagtggaaatcacacattgaggtgtgggttgctaaaagacaccttcatgagtggcttctagc 1838638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 9005422 - 9005495
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||| |||||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||    
T  9005422 tatatgaattttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatcagcatttgttaaaa 9005495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 14463321 - 14463386
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||    
T  14463321 ttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaa 14463386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 1627729 - 1627654
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    |||||||||||||||||||| |||||||||||||| || ||  || ||||||||||||||||||| || |||||||    
T  1627729 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttactaaaagacaccttcatgggtgacttctag 1627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 10769822 - 10769747
Alignment:
Q  121 aagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| |||||||||||| | || || ||||||| ||| ||||||||||| |||||||||||    
T  10769822 aagttataactaaaaagtggaaatcacaccttcaggtgtggattgctataaggcaccttcatgggtggcttctagc 10769747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 49660390 - 49660453
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatg 183  Q
    |||||||||||||||||||| |||||||| ||||| || ||| |||||||||||||||||||||    
T  49660390 aaagttataactaaaaagtggaaatcacaacttgaggtgtgagttgctaaaagacaccttcatg 49660453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 44720066 - 44720132
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||| ||| |||||    
T  44720066 gttttgttagaagacaccttttatgaaggtgtcttttagcaagttattctattagcaattggtaaaa 44720132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 25671134 - 25671057
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||| || ||||||  ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  25671134 agttttgctaaaagacatattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 25671057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 41146550 - 41146619
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||||||||| || ||||| ||||||||| |||||||||||||||||| | |||||||    
T  41146550 tagaagacactttttatgaaagtgttttttaccaagttattctatgagcatttgctaaaaaacaccaact 41146619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 2965018 - 2964942
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||| |||||||| | ||||| |||||||||||| ||||| |||||||||||| | |||||||    
T  2965018 gttttgctagaagacaccgtttatgaaggtgtcttctagcaagttattctatgaacatttgctaaaagacaccaact 2964942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 26213857 - 26213789
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| |||||||||| ||||| ||| | |||||||||||||||||| |||||||||||| |||||    
T  26213857 gagttttgctagaagacacattttacgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 26213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 26897356 - 26897431
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||| | || ||  |||||||||| ||||||||||| |||||||||||    
T  26897356 aaagttataactaaaaagtggaaatcacaccttaaggtgtg-gttgctaaaagtcaccttcatgggtggcttctagc 26897431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 30414156 - 30414080
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || |||| |||||||||  | ||  |||||||||||||||||||||| |||||||||||    
T  30414156 aaagttataactaaaaaatggaaataacaccttgagatgtgggttgctaaaagacaccttcatgggtggcttctagc 30414080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 1627831 - 1627764
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||||||||||||| ||   |||||||||||||||||| ||||| ||||||||||||    
T  1627831 agttttgctagaagacaccttttataaagatgtcttttagcaagttattctatgaacatttgctaaaa 1627764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 17453043 - 17452976
Alignment:
Q  50 gaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||| ||||||||| | ||||||||||||| |||| |||||||||||||||||| | |||||||    
T  17453043 gaagacactttttatgaaggtgtcttttagcaagctattctatgagcatttgctaaaagacaccaact 17452976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 49659892 - 49659958
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||||||||||||||| ||||| | || ||||||||||||||| ||||| |||||| |||||    
T  49659892 gttttgttagaagacacctttcatgaaggtgttttttagcaagttattctatgaacatttgttaaaa 49659958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 15660915 - 15660854
Alignment:
Q  135 aagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||| |||| || ||  |||||||||||||||||||||| |||||||||||    
T  15660915 aagtgaaaatcacactttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 15660854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 40460983 - 40461048
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||||| ||||| |||||| |||||    
T  40460983 ttttgatagaagacactttttatgaaggtgtcttttagcaagttattatatgaacatttgttaaaa 40461048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 9005533 - 9005593
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    ||||||||||||||||||||||||||||||| ||  | ||||||||||||||  |||||||    
T  9005533 ttataactaaaaagtgaaaatcacaccttgaggtgcggattgctaaaagacatattcatgg 9005593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 26842851 - 26842927
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| || ||||||||| |||| || ||  |||||||||||| |||| |||| |||||||||||    
T  26842851 aaagttataactaaaaaatggaaatcacacattgaggtgtgggttgctaaaagacgcctttatgggtggcttctagc 26842927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 30414258 - 30414182
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||| |||||||||||||| | || ||||||||||||||| ||| |||||||| ||||| | |||||||    
T  30414258 gttttgctagaatacaccttttatgaaggtgttttttagcaagttattatattagcatttgttaaaagacaccaact 30414182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 38509776 - 38509712
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaa 105  Q
    ||||||||||||||||| ||||||||| | |||||||||||| ||||  ||| ||||||||||||    
T  38509776 gttttgttagaagacacattttatgaaggtgtcttttagcaaattatcctataagcatttgctaa 38509712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 9338831 - 9338886
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacctt 179  Q
    |||||||||||||||  ||||||||||||||||| ||  |||||||||||||||||    
T  9338831 ttataactaaaaagtagaaatcacaccttgaagtgtgggttgctaaaagacacctt 9338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 1406710 - 1406776
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||| ||||||||| | |||||||||||| ||||| ||||| |||||| |||||    
T  1406710 gttttgctagaagacacattttatgaaggtgtcttttagcaaattattctatgaacatttggtaaaa 1406776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 1406812 - 1406886
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||||| ||||||||| ||||  | ||| ||| ||||| ||||||||||| ||| ||||||    
T  1406812 aaagttataactaaaaagtggaaatcacactttgagatgtgagttgttaaaaaacaccttcatgaatgacttcta 1406886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 14463422 - 14463496
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||| |||||| |||||||||||| || |  | || |||| ||||||||||||||||||||| ||||||    
T  14463422 aaagttataagtaaaaaatgaaaatcacacattaagatgtggattgttaaaagacaccttcatggatgacttcta 14463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 48875161 - 48875084
Alignment:
Q  119 aaaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||  |||||||| ||||| || ||  ||||||||||| ||||| |||| | |||||||||    
T  48875161 aaaagttataactaaaaagtagaaatcacaacttgaggtgtgggttgctaaaagaaacctttatgggttgcttctagc 48875084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 2964912 - 2964840
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||| |||||||||  | || ||||||||||||||| || || | |||||||||||    
T  2964912 ttataactaaaaagtggaaatgacaccttgagatgtggattgctaaaagacacttttataggtggcttctagc 2964840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 4105511 - 4105579
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||| |||||||||| | |  ||||| ||||||||||||| | |||||| |||||    
T  4105511 gagttttgttagaagacatcttttatgaaggtgatttttaacaagttattttatcaacatttgttaaaa 4105579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 30289110 - 30289054
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||  ||||| |||||    
T  30289110 aagacacgttttatgaaggcgtcttttaacaagttattttatgaatatttgttaaaa 30289054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 43939590 - 43939542
Alignment:
Q  59 ttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  43939590 ttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaa 43939542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 24993008 - 24992945
Alignment:
Q  54 acaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||| | |||||||||||| ||||| ||| |||||||| ||||| | |||||||    
T  24993008 acaccttttatgaaggtgtcttttagcaaattattatattagcatttgttaaaagacaccaact 24992945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 30819668 - 30819593
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| |||||||||||||||||||| | || ||||||||| ||||  |||  ||||||||||||| | |||||||    
T  30819668 ttttgctagaagacaccttttatgaaggtgttttttagcaaattatcctataggcatttgctaaaagacaccaact 30819593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 1469796 - 1469751
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttag 79  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||    
T  1469796 tatatgggttttgctagaagacaccttttatgaaggtgtcttttag 1469751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 17168157 - 17168222
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||||  ||||||| | |||||||| ||||||||| |||  |||||||||||||    
T  17168157 ttttgctagaagacaccaattatgaaggtgtcttttaacaagttattctatatgcatttgctaaaa 17168222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 44873906 - 44873979
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||    
T  44873906 tatatgagttttgttagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaa 44873979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 10078298 - 10078381
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  10078298 tatatgggttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 10078381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 9479408 - 9479481
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| ||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  9479408 tatatgggttttgttagaagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaa 9479481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 16930858 - 16930782
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||| || ||||||||    
T  16930858 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagacaccttcatgggtgacttctagc 16930782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 44508955 - 44508887
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttc 192  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  44508955 ttataactaaaaggtgaaaatcacaccttgaggtatgagttgctaaaagacaccttcatgggtggcttc 44508887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 30774119 - 30774202
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| |||||||||||||||||||| | || ||||||||||||||| |||||||||||||||||| | |||||||    
T  30774119 tatatgggttttgctagaagacaccttttatgaaggtgttttttagcaagttattctatgagcatttgctaaaagataccaact 30774202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 19922613 - 19922689
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  19922613 aaagttataactaaaaggtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 19922689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 28539164 - 28539240
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||| ||||| | |||||||    
T  28539164 gttttgttagaagacacattttatgaatatgtcttttagcaagttattttatgagcatttgttaaaagataccaact 28539240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 41624705 - 41624629
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||| ||||||| |||||| ||||    
T  41624705 aaagttataactaaaaagtaaaaatcacaccttgaggtgtgagttgctaaaagacactttcatgggtggcttatagc 41624629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 16645534 - 16645471
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatg 183  Q
    |||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||    
T  16645534 aaagttataactaaaaagtggaaatcacaccttgaggtatgggttgctaaaagacaccttcatg 16645471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 16784330 - 16784501
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactga----------------aaag 123  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||| ||| | |||||| ||||| | ||||||| |                ||||    
T  16784330 agttttgctagaagacaccttttatgaaggtgtcttttagcaagttattatattaacatttgttaaaagacaccaactaatttttatgaaggtagcaaag 16784429  T
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||| || |||||||||||||| || ||  ||||||||| ||||||||||||||||||||||||    
T  16784430 ttataactaaaaaatggaaatcacaccttgaggtgtgggttgctaaaa-acaccttcatggatggcttctagc 16784501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 26912483 - 26912402
Alignment:
Q  36 tatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||| |||||| |||||||||| ||||||||| | |||||||| ||||||||| |||||||||||||||||| | |||||||    
T  26912483 tatgggttttgctagaagacacattttatgaatgtgtcttttaacaagttattctatgagcatttgctaaaagacaccaact 26912402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 185
Target Start/End: Original strand, 42806314 - 42806379
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgga 185  Q
    |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| ||||||||    
T  42806314 aaagttataactaaaaagtggaaatcacaccttgaggtgtggattgctaaaagacactttcatgga 42806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 3210921 - 3210845
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||| |||| ||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  3210921 aaagttataattaaaaagtggaaataacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 3210845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 14916716 - 14916640
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||| ||||||||||||||||||||| | || ||| ||||||||||||||||||||  |||| |||||||    
T  14916716 aaagttataacaaaaaagtgaaaatcacaccttaaggtgtgagttgctaaaagacaccttcataaatggtttctagc 14916640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 39077439 - 39077363
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  39077439 gtttttttagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgttaaaagacaccaact 39077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 22812376 - 22812305
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggctt 191  Q
    ||||||||||||||||||||||||||||| ||||| || ||  |||||||||| ||||||||||| ||||||    
T  22812376 aaagttataactaaaaagtgaaaatcacatcttgaggtgtgggttgctaaaaggcaccttcatgggtggctt 22812305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 33568122 - 33568047
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    ||||||||||||||||| | ||||||||||||||| || || |||||||||| |||||||||||| || |||||||    
T  33568122 aaagttataactaaaaaataaaaatcacaccttgaggtgtggattgctaaaaaacaccttcatgggtgacttctag 33568047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 254004 - 253942
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||||||||||||||||||||||||||||||| || |   ||||||||||||||||||||    
T  254004 aaagttataactaaaaagtgaaaatcacaccttgaggtgtaggttgctaaaagacaccttcat 253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 661854 - 661916
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||||||||||||||||||||||||||||||| || |   ||||||||||||||||||||    
T  661854 aaagttataactaaaaagtgaaaatcacaccttgaggtgtaggttgctaaaagacaccttcat 661916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 31272824 - 31272755
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||| |||||||| |||||  ||||| |||||||||||||||||||| |||||||||||    
T  31272824 ttataactaaaaagtggaaatcacatcttgagatatgagttgctaaaagacaccttcat-gatggcttcta 31272755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 10078411 - 10078480
Alignment:
Q  127 taactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||| |||||||||||||| || ||  |||||||||||||||||| ||| |||||||||||    
T  10078411 taactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcttgggtggcttctagc 10078480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 44473747 - 44473824
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| |||| ||||| | |||||||||||||||||| |||||| ||||| ||||| | |||||||    
T  44473747 agttttgttagaagacatctttcatgaaggtgtcttttagcaagttattgtatgagtatttgttaaaagacaccaact 44473824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9478814 - 9478890
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||||| |||| || ||  ||||||||||| | |||||||| |||||||||||    
T  9478814 aaagttataactaaaaagtggaaatcacactttgaggtgtgggttgctaaaagatatcttcatgggtggcttctagc 9478890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 16930960 - 16930884
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||| |||||||||||| | |||||||||||||||||| |||||||||||  ||||| | |||||||    
T  16930960 gttttgatagaagataccttttatgaaggtgtcttttagcaagttattctatgagcattttttaaaagacaccaact 16930884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 23472515 - 23472590
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||||||||||||| | |||||||||| ||||||| |||||| ||||||||||| | |||||||    
T  23472515 gttttgctagaagacaccttttatgaaggtgtcttttagc-agttattctatgaggatttgctaaaagataccaact 23472590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 26912376 - 26912301
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||| |||||||||||||||||||||| || ||  ||||||||| |||||||||||| |||||| ||||    
T  26912376 aaagttataactgaaaagtgaaaatcacaccttgaggtgtgggttgctaaaa-acaccttcatgggtggcttttagc 26912301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 28539266 - 28539342
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||| || ||||  | ||  |||||||||||||||||||| | |||||||||||    
T  28539266 aaagttataactaaaaagtgaaaatcaaacattgagatgtgggttgctaaaagacaccttcataggtggcttctagc 28539342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 33568224 - 33568148
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||| |||||| || | |||||||| ||||||||| |||||||||||| ||||| | |||||||    
T  33568224 gttttgttagaagacacattttataaaggtgtcttttatcaagttattctatgagcatttgttaaaagacaccaact 33568148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 28969154 - 28969095
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacacctt 179  Q
    |||||||||||||||||||| ||||||||||||||||| ||  ||||||||| |||||||    
T  28969154 aaagttataactaaaaagtggaaatcacaccttgaagtgtgggttgctaaaatacacctt 28969095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 847652 - 847714
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat 182  Q
    ||||||| ||||||||||||||||||||||||||| || |   ||||||||||||||||||||    
T  847652 aaagttaaaactaaaaagtgaaaatcacaccttgaggtgtaggttgctaaaagacaccttcat 847714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 12176258 - 12176196
Alignment:
Q  123 gttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    |||||||||||||||| || ||||||||||||| || || |||||||||||||||||||||||    
T  12176258 gttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgg 12176196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 12420686 - 12420624
Alignment:
Q  123 gttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatgg 184  Q
    |||||||||||||||| || ||||||||||||| || || |||||||||||||||||||||||    
T  12420686 gttataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttcatgg 12420624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 38498406 - 38498340
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||| | |||||| |||||    
T  38498406 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctattaacatttgttaaaa 38498340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 42806203 - 42806261
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttat 92  Q
    ||||||||||||| ||||||||||||||||||||   |||||||||||| |||||||||    
T  42806203 tatatgagttttgctagaagacaccttttatgaagatgtcttttagcaaattattttat 42806261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 12295321 - 12295256
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| || ||||||||||||||||| | |||||||||||||||||| ||| |||||||| |||||    
T  12295321 ttttgctataagacaccttttatgaatgtgtcttttagcaagttattctattagcatttgttaaaa 12295256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 13327084 - 13327020
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    ||||| |||||||||| ||||||||| |  ||||||||||||||||||||||| ||||||||||||    
T  13327084 ttttgctagaagacacattttatgaaggtatcttttagcaagttattttatga-catttgctaaaa 13327020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 3210968 - 3210920
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  3210968 tatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaa 3210920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 9478712 - 9478788
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||| ||||||  || ||||||||||||||| ||| | |||||| ||||| | |||||||    
T  9478712 gttttgttagaagacacctttaatgaaaatgttttttagcaagttattctattaacatttgttaaaagacaccaact 9478788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 23472616 - 23472688
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttc 192  Q
    |||||||||||||||||||| ||||||||||||||  | |  |||||||||||||||||| |||  |||||||    
T  23472616 aaagttataactaaaaagtggaaatcacaccttgagttgtagattgctaaaagacaccttaatgagtggcttc 23472688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 30774228 - 30774304
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||| ||||||||||||||| |||||||||||| | || ||  |||||||||||||||||| ||  |||||||||||    
T  30774228 aaaggtataactaaaaagtggaaatcacaccttaaggtgtgggttgctaaaagacaccttcgtgagtggcttctagc 30774304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 38092204 - 38092280
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || || ||| |||||| ||| ||| || |||| ||||||||    
T  38092204 aaagttataactaaaaagtggaaatcacaccttgatgtgtggattactaaaaaacatctttatagatgacttctagc 38092280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 14371658 - 14371607
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatga 94  Q
    |||| |||||||||||||||||||| | |||||||||||||||||| |||||    
T  14371658 tttgctagaagacaccttttatgaaggtgtcttttagcaagttattatatga 14371607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 1271076 - 1271015
Alignment:
Q  121 aagttataactaaaaagtgaa-aatcacaccttgaagtatgaattgctaaaagacaccttca 181  Q
    ||||||||| ||||||||| | |||||||||||||||| ||||||||||||| |||| ||||    
T  1271076 aagttataattaaaaagtggataatcacaccttgaagtgtgaattgctaaaatacacattca 1271015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 5224401 - 5224449
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgcta 168  Q
    |||||||||||||||||||| |||||||||||||| || ||| ||||||    
T  5224401 aaagttataactaaaaagtggaaatcacaccttgaggtgtgagttgcta 5224449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 14916785 - 14916742
Alignment:
Q  74 ttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||| |||||||||||||||||| | |||||||    
T  14916785 ttttagcaagttattctatgagcatttgctaaaagataccaact 14916742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 42556980 - 42557019
Alignment:
Q  157 tatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  42556980 tatggattgctaaaagacaccttcatggatgtcttctagc 42557019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 12176362 - 12176316
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||    
T  12176362 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12176316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 12295220 - 12295186
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttga 154  Q
    |||||||||||||||||||| ||||||||||||||    
T  12295220 aaagttataactaaaaagtggaaatcacaccttga 12295186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 12420790 - 12420744
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||    
T  12420790 gttttgctagaagacaccttttatgaaggtgtgttttagcaagttat 12420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 38498304 - 38498270
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttga 154  Q
    |||||||||||||||||||| ||||||||||||||    
T  38498304 aaagttataactaaaaagtggaaatcacaccttga 38498270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 40067530 - 40067460
Alignment:
Q  126 ataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||| ||||||||||||||  | ||  || |||||||||| |||||||| || ||||||||    
T  40067530 ataactaaaaagtggaaatcacaccttgagatgtgggttactaaaagacatcttcatgggtgacttctagc 40067460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 44874058 - 44874092
Alignment:
Q  162 attgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||| |||||||||||    
T  44874058 attgctaaaagacaccttcatgggtggcttctagc 44874092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 16645581 - 16645536
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttag 79  Q
    |||||| |||||| |||||||||||||||||||| | |||||||||    
T  16645581 tatatgggttttgctagaagacaccttttatgaaggtgtcttttag 16645536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 39590032 - 39589991
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    |||||| |||||||||||||||||||| | ||||||||||||    
T  39590032 gttttgctagaagacaccttttatgaaggtgtcttttagcaa 39589991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 10775933 - 10775969
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||||||||| | |||||||||||||||    
T  10775933 aagacaccttttatgaaagtgccttttagcaagttat 10775969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 14041433 - 14041488
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    |||||||||||||||||||| | ||||||||||| ||| ||| || |||||||||||    
T  14041433 aaagttataactaaaaagtggatatcacaccttg-agtgtgacttactaaaagacac 14041488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 40067602 - 40067550
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacac 176  Q
    |||||||||||||||| |||||||| ||||| || ||| ||||||||| ||||    
T  40067602 ttataactaaaaagtggaaatcacatcttgaggtgtgagttgctaaaaaacac 40067550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 94863 - 94787
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  94863 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 94787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 478317 - 478386
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||| ||||||||| | || ||||||||||||||| ||||| |||||| ||||| | |||||||    
T  478317 tagaagacactttttatgaaggtgttttttagcaagttattctatgaacatttgttaaaagacaccaact 478386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 18924590 - 18924514
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||| |||||||||||    
T  18924590 aaagttataactaaaaagtggaaatcacaccttgaggtatgggttgctaaaagacaccttcatgggtggcttctagc 18924514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 24314317 - 24314394
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcat-ggatggcttctagc 196  Q
    |||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  24314317 aaagttataactaaaatgtggaaatcacaccttgaggtgtgaattgctaaaagacaccttcatgggatggcttctagc 24314394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 29471685 - 29471609
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| ||||||| |||||| || || ||||||||||||||||||||||| |||||||||||    
T  29471685 aaagttataactaaaaagtggaaatcactccttgaggtgtggattgctaaaagacaccttcatgggtggcttctagc 29471609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 34450356 - 34450432
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||| ||||||||| |||||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  34450356 aaagttataaataaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatggatggcttctagc 34450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 18924699 - 18924616
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||| |||||| ||||| | |||||||    
T  18924699 tatatgagttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgttaaaagacaccaact 18924616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 10862621 - 10862693
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||||||| || ||  |||||||||||||||||||||| |||||||||||    
T  10862621 ttataactaaaaagtggaaatcacaccttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 10862693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 21950742 - 21950818
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||||||||||| ||||||| || ||  |||||||||||||| |||||||||| ||||||||    
T  21950742 aaagttataactaaaaagtgaaaatcataccttgaggtgtgggttgctaaaagacactttcatggatgacttctagc 21950818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 27097074 - 27097150
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  |||| ||||||||||||||||| |||||||||||    
T  27097074 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttgccaaaagacaccttcatgggtggcttctagc 27097150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 9548260 - 9548185
Alignment:
Q  121 aagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||||| |||||||| ||||| || ||  |||||||||||||||||||||| |||||||||||    
T  9548260 aagttataactaaaaagtggaaatcacatcttgaggtgtgggttgctaaaagacaccttcatgggtggcttctagc 9548185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 9548370 - 9548287
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || |||||| |||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  9548370 tatatgggttttgctataagacatcttttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 9548287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 10664851 - 10664768
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||| ||||| || ||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||| | |||||||    
T  10664851 tatatgaattttgctataagacacattttatgaaggtgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 10664768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 12895436 - 12895506
Alignment:
Q  125 tataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||    
T  12895436 tataactaaaaagtgaaaatcacatcttgaggtgtggattgctaaaagacaccttcatgg-tggcttctagc 12895506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 42090408 - 42090491
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||| | |||||||    
T  42090408 tatatgagttttgctggaagacaccttttatgaaagtgtcttttagcaaattattctatgaacatttgttaaaagacaccaact 42090491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 29471787 - 29471721
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||||| ||||||||||||    
T  29471787 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgaacatttgctaaaa 29471721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 6231261 - 6231332
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggctt 191  Q
    ||||||||||||||||||||||||||||||||| || | ||| ||||||||| |||| ||||||| ||||||    
T  6231261 aaagttataactaaaaagtgaaaatcacaccttaaaatgtgagttgctaaaaaacacattcatgggtggctt 6231332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 12725768 - 12725694
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    |||||||||||||||||||| ||||||||| |||| || ||   ||||||||||||||||||||| |||||||||    
T  12725768 aaagttataactaaaaagtggaaatcacactttgaggtgtggcctgctaaaagacaccttcatgggtggcttcta 12725694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 12725871 - 12725794
Alignment:
Q  40 agttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||| ||||||||||||||||| ||   |||||||||||||||||| ||||||||||| |||||| | |||||||    
T  12725871 agttttgctagaagacaccttttataaagatgtcttttagcaagttattctatgagcatttactaaaagacaccaact 12725794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 10664742 - 10664666
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| || ||  || ||||||||||||||||| | |||||| ||||    
T  10664742 aaagttataactaaaaagtggaaatcacaccttgaggtgtgggttactaaaagacaccttcatcggtggcttatagc 10664666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 39089256 - 39089180
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||| ||| | |||||| ||||| | |||||||    
T  39089256 gttttgttagaagacaccttttatgaatgtgtcttttaacaagttattctattaacatttgttaaaagacaccaact 39089180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 24314208 - 24314291
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||| || || ||||||||||| || | |||||||||||| |||||||||||||||||| ||||| | |||||||    
T  24314208 tatatgggttttgctaaaatacaccttttataaaggtgtcttttagcaaattattttatgagcatttgttaaaagacaccaact 24314291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 21950650 - 21950716
Alignment:
Q  51 aagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| | |||||||||||||||||| |||||||||||| ||||| | |||||||    
T  21950650 aagacatcttttatgaaggtgtcttttagcaagttattctatgagcatttgttaaaaaacaccaact 21950716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 4206423 - 4206476
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||| |||||||||| ||||||||| | |||||||||||||||||    
T  4206423 tatatgagttttgctagaagacacattttatgaaggtgtcttttagcaagttat 4206476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 1750071 - 1749995
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| |||||||||| ||||||||| | ||||||||||| |||||| ||| |||||||| ||||| | |||||||    
T  1750071 gttttgctagaagacacattttatgaaggtgtcttttagcaggttattctattagcatttgttaaaagacaccaact 1749995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 39435088 - 39435040
Alignment:
Q  37 atgagttttgttagaagacaccttttatgaaagcgtcttttagcaagtt 85  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  39435088 atgagttttgctagaagacaccttttatgaaagtgtcttttaacaagtt 39435040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 1749965 - 1749891
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaa--ttgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||| ||||||||| || || |  ||||||||| ||||||||||||||||||| ||||    
T  1749965 ttataactaaaaagtggaaattacaccttgaggtgtgtaggttgctaaaaaacaccttcatggatggcttgtagc 1749891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 39089154 - 39089091
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatg 183  Q
    ||||||||||||||||| || |||||| ||||||| || || |||||||||| |||||||||||    
T  39089154 aaagttataactaaaaaatggaaatcataccttgaggtgtggattgctaaaaaacaccttcatg 39089091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 33740228 - 33740281
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    |||||| |||||  |||||||||||||||||||| | |||||||||||||||||    
T  33740228 tatatgggttttactagaagacaccttttatgaaggtgtcttttagcaagttat 33740281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 39961586 - 39961513
Alignment:
Q  124 ttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||| || ||||| || |||| || || |||||||||||||||||||||||||| ||| ||||    
T  39961586 ttataactaaaaagttgataatcatactttgaggtgtggattgctaaaagacaccttcatggatgtcttttagc 39961513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 6231214 - 6231262
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    ||||||||||||| ||||||||||| |||||||| | ||||||||||||    
T  6231214 tatatgagttttgctagaagacaccatttatgaaggtgtcttttagcaa 6231262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 25810558 - 25810482
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||| |||||||||||| | || ||||||||||||||| ||| | |||||| ||||| | |||||||    
T  25810558 gttttgctagaagataccttttatgaaggtgttttttagcaagttattatattatcatttgttaaaagacaccaact 25810482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 34125595 - 34125539
Alignment:
Q  125 tataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttc 180  Q
    |||||||||||||| || ||||||||||||| || || |||||||||||||||||||    
T  34125595 tataactaaaaagttgataatcacaccttgaggtgtggattgctaaaagacaccttc 34125539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 36779843 - 36779779
Alignment:
Q  132 aaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||| ||||||||| |||| || |  |||||||||||||| ||||||| ||||||||||||    
T  36779843 aaaaagtggaaatcacacattgaggtgtagattgctaaaagacaacttcatgtatggcttctagc 36779779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 36779904 - 36779856
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    ||||||||||||  |||||||||||||||||||| | ||||||||||||    
T  36779904 tatatgagttttcctagaagacaccttttatgaaggtgtcttttagcaa 36779856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 44539996 - 44539920
Alignment:
Q  42 ttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt-ttatgagcatttgctaaaacagaccaact 117  Q
    ||||||||||||||| |||||||||| | ||| |||||||||||||| ||||  ||||||| ||||| | |||||||    
T  44539996 ttttgttagaagacatcttttatgaaggtgtcatttagcaagttattcttattggcatttgttaaaagataccaact 44539920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 5534340 - 5534265
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctag 195  Q
    |||||||||| ||||||||  |||||||| ||||| || || ||| |||||| | ||||||||||||| |||||||    
T  5534340 aaagttataattaaaaagttgaaatcacatcttgaggtgtggattactaaaaaataccttcatggatgacttctag 5534265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 16719880 - 16719833
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttatt 88  Q
    |||||| |||||||||||||||||||| | |||||||||| |||||||    
T  16719880 gttttgctagaagacaccttttatgaaggtgtcttttagctagttatt 16719833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 10862577 - 10862618
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaa 82  Q
    |||||| |||||||||||||||||||| | ||||||||||||    
T  10862577 gttttgctagaagacaccttttatgaaggtgtcttttagcaa 10862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 33471424 - 33471477
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||| ||||||| ||||||||  |||||||||| | |||||||||||||||||    
T  33471424 tatataagttttgctagaagacgtcttttatgaatgtgtcttttagcaagttat 33471477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 42090517 - 42090593
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||||| ||||||||||| ||| | || || ||||  ||||||||| ||||||  |||| ||||||    
T  42090517 aaagttataactaaaaaatgaaaatcacatcttaaggtgtggattgtgaaaagacactttcatgagtggcctctagc 42090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 8582 - 8506
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||| | || || ||||||||||||||||||||||| |||||||||||    
T  8582 aaagttataactaaaaagtggaaatcacaccttcaggtgtggattgctaaaagacaccttcatgggtggcttctagc 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 17888 - 17964
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||| |  ||| |||||||||||||||||||||| || ||||||||    
T  17888 aaagttataactaaaaagtggaaatcacaccttgaggcgtgagttgctaaaagacaccttcatgggtgacttctagc 17964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 35054 - 35118
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaa 105  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  35054 gttttgctagaagacaccttttatgaaggtgtcttttagcaagttattctatgagcatttgctaa 35118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 35156 - 35206
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaa 170  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||    
T  35156 aaagttataactaaaaagtgaaaatcacaccttgaggtgtggattgctaaa 35206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 9257 - 9329
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||||||||| ||||    
T  9257 ttataactaaaaagtggaaatcacaccttgaggtgtggattgcgaaaagacaccttcatggatggcttatagc 9329  T

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Target: scaffold0093; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 9159 - 9228
Alignment:
Q  48 tagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||||||||||||||||| | || ||||||||||||||| |||||||||||||||||| | |||||||    
T  9159 tagaagacaccttttatgaaggtgtattttagcaagttattctatgagcatttgctaaaagataccaact 9228  T

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Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 75025 - 75101
Alignment:
Q  120 aaagttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||||||| |||||||||||||  |||||  ||||||||| |||||||||||| |||||||||||    
T  75025 aaagttataactaaaaagtggaaatcacaccttggggtatgggttgctaaaatacaccttcatgggtggcttctagc 75101  T

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Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 121683 - 121611
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||  |||||||||||    
T  121683 ttataactaaaaagtggaaatcacaccttgaaatatggattgctaaaaaacaccttcatgagtggcttctagc 121611  T

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Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 121791 - 121723
Alignment:
Q  39 gagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||| || || |||| ||||||||| | |||||||| ||||||||| ||||||||||||||||||    
T  121791 gagttttgctataaaacacattttatgaaggtgtcttttaacaagttattctatgagcatttgctaaaa 121723  T

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Target: scaffold0001 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 392406 - 392482
Alignment:
Q  41 gttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaact 117  Q
    |||||| ||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||| | |||||||    
T  392406 gttttgctagaagacaccttttatgaagatgtcttttagcaagttattctatgagcatttgctaaaagacaccaact 392482  T

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Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 392513 - 392584
Alignment:
Q  125 tataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttctagc 196  Q
    ||||||||||||||| |||||||||||| | || ||  |||||||||||||||||| | | |||||||||||    
T  392513 tataactaaaaagtggaaatcacaccttaaggtgtgggttgctaaaagacaccttcgtaggtggcttctagc 392584  T

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Target: scaffold0009 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 49815 - 49887
Alignment:
Q  35 atatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaa 107  Q
    |||||||||||| |||||| ||||||||||||| |  ||||||||||||||||||||||| |||||| |||||    
T  49815 atatgagttttgctagaagccaccttttatgaatgtatcttttagcaagttattttatgaacatttgttaaaa 49887  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 35949 - 35882
Alignment:
Q  124 ttataactaaaaagtgaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggctt 191  Q
    |||||||||||||||  ||| ||||||| || || | ||||||||||| |||||||||| ||||||||    
T  35949 ttataactaaaaagtagaaaacacacctggaggtgttaattgctaaaaaacaccttcatagatggctt 35882  T

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Target: scaffold0112; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 24637 - 24563
Alignment:
Q  121 aagttataactaaaaagt-gaaaatcacaccttgaagtatgaattgctaaaagacaccttcatggatggcttcta 194  Q
    ||||||||| |||||||| || ||||| | ||||| || ||| ||||||||||| ||||||||||||| ||||||    
T  24637 aagttataaataaaaagttgataatcaaatcttgaggtgtgacttgctaaaagagaccttcatggatgtcttcta 24563  T

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Target: scaffold0112; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 24684 - 24631
Alignment:
Q  34 tatatgagttttgttagaagacaccttttatgaaagcgtcttttagcaagttat 87  Q
    ||||||||||||| |||||||||  ||||||||| | ||||| |||||||||||    
T  24684 tatatgagttttgctagaagacattttttatgaaggtgtcttgtagcaagttat 24631  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 77027 - 77108
Alignment:
Q  43 tttgttagaagacaccttttatgaaagcgtcttttagcaagttattttatgagcatttgctaaaacagaccaactgaaaagt 124  Q
    |||| ||||||||||  |||||||| | || ||||||||||||||| | | | |||||||||||| | ||||||| ||||||    
T  77027 tttgctagaagacactatttatgaaggtgttttttagcaagttattctgtaaacatttgctaaaagacaccaactaaaaagt 77108  T

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