View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14474_low_8 (Length: 533)
Name: NF14474_low_8
Description: NF14474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14474_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 478; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 1 - 499
Target Start/End: Original strand, 8887497 - 8887997
Alignment:
| Q |
1 |
gaccgatgttatcttcaagaaataacaagtatcgaacaaatttcccatttcaaataattcgtccaatgtaaaa--acggcttaaaatttcaccatttaat |
98 |
Q |
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| T |
8887497 |
gaccgatgttatcttcaagaaataacaagtatcgaacaaatttcccatttcaaataattcgtccaatgtaaaaaaacggcttaaaatttcaccatttaat |
8887596 |
T |
|
| Q |
99 |
ggtcataacaaattcaaataaatagcgatgagtacgagtacagacatcaaacggcaaaaagttaagccgtttattaaaatttgatacaaagtaccaaaac |
198 |
Q |
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| T |
8887597 |
ggtcataacaaattcaaataaatagcaatgagtacgagtacagacatcaaacggcaaaaatttaagccgtttattaaaatttgatacaaagtaccaaaac |
8887696 |
T |
|
| Q |
199 |
tgctatccagacagccttctgacactaatactccttcaaaatccataagaaacaaagcagccaattggttcaattaaatttcaatacactattaacaaaa |
298 |
Q |
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| T |
8887697 |
tgctatccagacagccttctgacactaatactccttcaaaatccataagaaacaaagcagccaattggttcaattaaatttcaatacactattaacaaaa |
8887796 |
T |
|
| Q |
299 |
gtatgaaacaaagcagccacaaacactagcaaacagggtcgatatgaacattcttcaaagatcaaagttaaaaccatgccaaacacaggatccataaatc |
398 |
Q |
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| T |
8887797 |
gtatgaaacaaagcagccacaaacactagcaaacagggtcgatatgaacattcttcaaagatcaaagttaaaaccatgccaaacacaggatccataaatc |
8887896 |
T |
|
| Q |
399 |
taacacatatacataaaagaaaatccagcatccttgatcaagataatgaacattaacaaaaagagaggcaaaaacttggattgttagaatccttgcagca |
498 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
8887897 |
taacacatatacataaaagaaaatccagcatccttgatcaagataatgaacattaacaaaaagagaggcaaaaacttggattgttagaatccttgaagca |
8887996 |
T |
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| Q |
499 |
c |
499 |
Q |
| |
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| T |
8887997 |
c |
8887997 |
T |
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