View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14475_high_30 (Length: 244)
Name: NF14475_high_30
Description: NF14475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14475_high_30 |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 24 - 226
Target Start/End: Complemental strand, 51332744 - 51332542
Alignment:
| Q |
24 |
atcttctcactctgacaccatggctccaccaaaaaagccttctccaagaaagagagaccccaatgatggaggggagggtcgcaagtgccttcattgcgcc |
123 |
Q |
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| T |
51332744 |
atcttctcactctgacaccatggctccaccaaaaaagccttctccaagaaagagagaccccaatgatggaggggagggtcgcaagtgccttcattgcgcc |
51332645 |
T |
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| Q |
124 |
actgataaaactccacaatggcgcactgggccattaggtccaaagacactttgcaatgcctgtggagtcagatacaagtcgggtcgactcgtacctgagt |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51332644 |
actgataaaactccacaatggcgcactgggccattaggtccaaagacactttgcaatgcctgtggagtcagatacaagtcgggtcgactcgtacctgagt |
51332545 |
T |
|
| Q |
224 |
ata |
226 |
Q |
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| T |
51332544 |
ata |
51332542 |
T |
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