View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14475_high_33 (Length: 235)
Name: NF14475_high_33
Description: NF14475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14475_high_33 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 33557129 - 33556908
Alignment:
| Q |
14 |
aggcctatgctccctttcaactccagtatgcgaggagtgattggccgaggtttaatttctggtggtggagcaaatatgtcatgaccactaagctccttgc |
113 |
Q |
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| T |
33557129 |
aggcctatgctccctttcaactccagtatgcgaggagtaattggccgaggtttgatttctggtggtggagcaaatatgtcatgaccactaagctccttgc |
33557030 |
T |
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| Q |
114 |
actttgcatcagaaagctgcttgttcaacttattgtcttcactttccatagttccactgagctcacgctgcttggccacctcaggcaaggaagcaggctt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33557029 |
actttgcatcagaaagctgcttgttcaacttattgtcttcactttccatagttccactgagctcacgctgcttggccacctcaggcaaggaagcaggctt |
33556930 |
T |
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| Q |
214 |
ttttggcgaaacactctcttcc |
235 |
Q |
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|||||||||||||||||||||| |
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| T |
33556929 |
ttttggcgaaacactctcttcc |
33556908 |
T |
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