View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14475_high_37 (Length: 227)

Name: NF14475_high_37
Description: NF14475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14475_high_37
NF14475_high_37
[»] chr7 (38 HSPs)
chr7 (61-124)||(19934317-19934380)
chr7 (61-124)||(19965456-19965519)
chr7 (146-227)||(48628964-48629045)
chr7 (151-227)||(47294197-47294273)
chr7 (152-227)||(47294510-47294585)
chr7 (149-227)||(31684353-31684431)
chr7 (149-227)||(39033876-39033954)
chr7 (150-227)||(11476461-11476538)
chr7 (193-227)||(42888763-42888797)
chr7 (149-226)||(43968508-43968585)
chr7 (193-227)||(44544268-44544302)
chr7 (151-227)||(31684040-31684116)
chr7 (194-227)||(47219304-47219337)
chr7 (152-227)||(40851130-40851205)
chr7 (148-179)||(47281422-47281453)
chr7 (193-223)||(1469745-1469775)
chr7 (193-227)||(11050209-11050243)
chr7 (193-227)||(30876418-30876452)
chr7 (193-227)||(30972160-30972194)
chr7 (193-227)||(34378556-34378590)
chr7 (193-227)||(37393946-37393980)
chr7 (193-227)||(37394245-37394279)
chr7 (193-227)||(43968478-43968512)
chr7 (193-227)||(44544568-44544602)
chr7 (150-227)||(47218961-47219038)
chr7 (193-227)||(48628664-48628698)
chr7 (194-227)||(2960589-2960622)
chr7 (151-227)||(27772982-27773058)
chr7 (194-227)||(33884214-33884247)
chr7 (194-227)||(45233677-45233710)
chr7 (151-227)||(45723397-45723473)
chr7 (194-227)||(47119880-47119913)
chr7 (195-227)||(221434-221466)
chr7 (151-179)||(2960546-2960574)
chr7 (151-179)||(11476852-11476880)
chr7 (195-227)||(35600370-35600402)
chr7 (194-226)||(42979587-42979619)
chr7 (151-179)||(47119837-47119865)
[»] chr1 (50 HSPs)
chr1 (147-227)||(16508147-16508227)
chr1 (151-227)||(28425269-28425345)
chr1 (152-227)||(7651821-7651896)
chr1 (152-227)||(19274377-19274452)
chr1 (152-227)||(22351032-22351107)
chr1 (152-227)||(41105834-41105909)
chr1 (150-227)||(48802236-48802313)
chr1 (193-227)||(52350143-52350177)
chr1 (146-179)||(19274765-19274798)
chr1 (151-227)||(24204377-24204453)
chr1 (151-227)||(25800800-25800876)
chr1 (194-227)||(37216756-37216789)
chr1 (151-227)||(46051609-46051685)
chr1 (195-227)||(23767662-23767694)
chr1 (152-227)||(24204718-24204793)
chr1 (151-226)||(49594868-49594943)
chr1 (193-225)||(50689832-50689864)
chr1 (195-226)||(33673878-33673909)
chr1 (149-179)||(6711678-6711708)
chr1 (193-227)||(9974701-9974735)
chr1 (193-227)||(12142953-12142987)
chr1 (150-227)||(36157925-36158002)
chr1 (150-227)||(37217055-37217132)
chr1 (193-227)||(44978716-44978750)
chr1 (149-226)||(45670390-45670467)
chr1 (193-227)||(46825690-46825724)
chr1 (193-227)||(50099079-50099113)
chr1 (193-227)||(50690102-50690136)
chr1 (193-227)||(52146881-52146915)
chr1 (153-226)||(52350173-52350246)
chr1 (194-227)||(6710961-6710994)
chr1 (193-226)||(7553265-7553298)
chr1 (194-227)||(17990015-17990048)
chr1 (194-227)||(19274718-19274751)
chr1 (194-227)||(19315799-19315832)
chr1 (193-226)||(24036620-24036653)
chr1 (150-179)||(26549204-26549233)
chr1 (194-227)||(38473874-38473907)
chr1 (194-227)||(43396834-43396867)
chr1 (194-227)||(45350666-45350699)
chr1 (142-179)||(45670753-45670790)
chr1 (193-226)||(46051338-46051371)
chr1 (194-227)||(49973802-49973835)
chr1 (194-226)||(19315500-19315532)
chr1 (195-227)||(25988520-25988552)
chr1 (194-226)||(26070052-26070084)
chr1 (195-227)||(26549547-26549579)
chr1 (195-227)||(33194870-33194902)
chr1 (151-179)||(34971275-34971303)
chr1 (195-227)||(36781391-36781423)
[»] chr3 (34 HSPs)
chr3 (144-227)||(21656677-21656760)
chr3 (149-227)||(50287381-50287459)
chr3 (151-227)||(1016890-1016966)
chr3 (152-227)||(29677635-29677710)
chr3 (150-227)||(20760319-20760396)
chr3 (193-227)||(27070987-27071021)
chr3 (150-227)||(33151884-33151961)
chr3 (194-227)||(22851856-22851889)
chr3 (151-227)||(36315220-36315296)
chr3 (152-227)||(1687498-1687573)
chr3 (193-224)||(1017206-1017237)
chr3 (149-227)||(19664356-19664434)
chr3 (193-227)||(3697005-3697039)
chr3 (193-227)||(19268686-19268720)
chr3 (193-227)||(20760019-20760053)
chr3 (150-227)||(20813689-20813766)
chr3 (193-227)||(21564655-21564689)
chr3 (193-227)||(27070687-27070721)
chr3 (193-227)||(28699824-28699858)
chr3 (193-227)||(47329422-47329456)
chr3 (150-179)||(1687858-1687887)
chr3 (150-179)||(21564341-21564370)
chr3 (145-178)||(31122870-31122903)
chr3 (194-227)||(35608349-35608382)
chr3 (194-227)||(39069616-39069649)
chr3 (193-226)||(53926229-53926262)
chr3 (151-179)||(1448641-1448669)
chr3 (151-179)||(8097228-8097256)
chr3 (195-227)||(10618699-10618731)
chr3 (195-227)||(35346421-35346453)
chr3 (151-179)||(38446294-38446322)
chr3 (151-179)||(44152517-44152545)
chr3 (151-179)||(44152880-44152908)
chr3 (151-179)||(49799017-49799045)
[»] chr4 (46 HSPs)
chr4 (149-227)||(28264802-28264880)
chr4 (150-227)||(26017268-26017345)
chr4 (152-227)||(31208566-31208641)
chr4 (193-227)||(17993236-17993270)
chr4 (193-227)||(19496393-19496427)
chr4 (193-227)||(44490478-44490512)
chr4 (193-227)||(49118770-49118804)
chr4 (151-227)||(28264489-28264565)
chr4 (194-227)||(48707952-48707985)
chr4 (143-179)||(2055094-2055130)
chr4 (149-227)||(5227549-5227627)
chr4 (141-227)||(12196628-12196714)
chr4 (152-226)||(25734472-25734546)
chr4 (193-227)||(12196337-12196371)
chr4 (150-227)||(17847372-17847449)
chr4 (153-226)||(17993266-17993339)
chr4 (150-227)||(22298335-22298412)
chr4 (193-227)||(25730399-25730433)
chr4 (149-179)||(30141373-30141403)
chr4 (193-227)||(31590936-31590970)
chr4 (193-227)||(31591234-31591268)
chr4 (193-227)||(32118573-32118607)
chr4 (193-227)||(55517133-55517167)
chr4 (194-227)||(9339072-9339105)
chr4 (194-227)||(10588739-10588772)
chr4 (194-227)||(11795103-11795136)
chr4 (194-227)||(15985169-15985202)
chr4 (150-179)||(19169062-19169091)
chr4 (150-179)||(19496442-19496471)
chr4 (146-179)||(20534402-20534435)
chr4 (150-179)||(28160251-28160280)
chr4 (151-227)||(33173926-33174002)
chr4 (194-227)||(33808028-33808061)
chr4 (150-179)||(42273647-42273676)
chr4 (194-227)||(44490070-44490103)
chr4 (143-227)||(48551965-48552049)
chr4 (194-227)||(48707682-48707715)
chr4 (194-227)||(49118500-49118533)
chr4 (150-179)||(50276431-50276460)
chr4 (195-227)||(8881963-8881995)
chr4 (150-178)||(8882311-8882339)
chr4 (195-227)||(9800398-9800430)
chr4 (151-179)||(17847003-17847031)
chr4 (151-179)||(36444588-36444616)
chr4 (151-179)||(51371372-51371400)
chr4 (151-179)||(56555440-56555468)
[»] scaffold0338 (1 HSPs)
scaffold0338 (152-227)||(5759-5834)
[»] chr8 (31 HSPs)
chr8 (152-227)||(22684207-22684282)
chr8 (149-227)||(35443470-35443548)
chr8 (193-227)||(259866-259900)
chr8 (193-227)||(656021-656055)
chr8 (193-227)||(841756-841790)
chr8 (193-227)||(3876067-3876101)
chr8 (193-227)||(22683936-22683970)
chr8 (193-227)||(36400018-36400052)
chr8 (193-227)||(37933530-37933564)
chr8 (193-226)||(2533131-2533164)
chr8 (143-179)||(24430868-24430904)
chr8 (147-226)||(38107259-38107338)
chr8 (193-227)||(513167-513201)
chr8 (193-227)||(513466-513500)
chr8 (193-227)||(2533160-2533194)
chr8 (149-179)||(5720425-5720455)
chr8 (193-227)||(12010711-12010745)
chr8 (193-227)||(13797247-13797281)
chr8 (150-227)||(15846954-15847031)
chr8 (193-227)||(35443169-35443203)
chr8 (193-227)||(37933801-37933835)
chr8 (150-179)||(8137338-8137367)
chr8 (194-227)||(41536476-41536509)
chr8 (150-179)||(43468908-43468937)
chr8 (195-227)||(440999-441031)
chr8 (151-179)||(9884673-9884701)
chr8 (151-179)||(24430477-24430505)
chr8 (194-226)||(33651701-33651733)
chr8 (151-179)||(33652048-33652076)
chr8 (143-179)||(38633608-38633644)
chr8 (151-179)||(41536433-41536461)
[»] chr6 (23 HSPs)
chr6 (151-226)||(26393258-26393333)
chr6 (193-227)||(6503577-6503611)
chr6 (146-227)||(17943195-17943276)
chr6 (143-227)||(12613069-12613153)
chr6 (151-227)||(12626795-12626871)
chr6 (152-227)||(2707618-2707693)
chr6 (147-225)||(2643927-2644005)
chr6 (149-227)||(35224139-35224217)
chr6 (193-227)||(1915291-1915325)
chr6 (193-227)||(1915591-1915625)
chr6 (193-227)||(2390153-2390187)
chr6 (193-227)||(2707347-2707381)
chr6 (193-227)||(3258755-3258789)
chr6 (193-227)||(6503877-6503911)
chr6 (193-227)||(12626495-12626529)
chr6 (193-227)||(26196598-26196632)
chr6 (193-227)||(29050431-29050465)
chr6 (194-227)||(1077094-1077127)
chr6 (150-179)||(2598005-2598034)
chr6 (194-227)||(8178198-8178231)
chr6 (195-227)||(2390424-2390456)
chr6 (199-227)||(8178498-8178526)
chr6 (199-227)||(25820503-25820531)
[»] chr2 (40 HSPs)
chr2 (152-227)||(41178267-41178342)
chr2 (193-227)||(3358098-3358132)
chr2 (193-227)||(41177983-41178017)
chr2 (151-227)||(920839-920915)
chr2 (147-227)||(37838456-37838536)
chr2 (152-227)||(771883-771958)
chr2 (195-227)||(9276733-9276765)
chr2 (195-227)||(9331915-9331947)
chr2 (152-227)||(12759657-12759732)
chr2 (152-227)||(16246441-16246516)
chr2 (143-179)||(23671710-23671746)
chr2 (148-179)||(2057132-2057163)
chr2 (148-179)||(27328791-27328822)
chr2 (148-179)||(37654301-37654332)
chr2 (193-227)||(2455869-2455903)
chr2 (193-227)||(7297480-7297514)
chr2 (193-227)||(8899541-8899575)
chr2 (193-227)||(12759997-12760031)
chr2 (193-227)||(19180281-19180315)
chr2 (193-227)||(19180580-19180614)
chr2 (150-227)||(28650331-28650408)
chr2 (193-227)||(33106917-33106951)
chr2 (193-227)||(36444176-36444210)
chr2 (193-227)||(40854768-40854802)
chr2 (193-227)||(41500741-41500775)
chr2 (194-227)||(8899840-8899873)
chr2 (194-227)||(17484499-17484532)
chr2 (143-176)||(22066567-22066600)
chr2 (193-226)||(33107218-33107251)
chr2 (194-227)||(36444476-36444509)
chr2 (151-227)||(37732099-37732175)
chr2 (194-227)||(37838140-37838173)
chr2 (150-179)||(38750863-38750892)
chr2 (194-227)||(42629845-42629878)
chr2 (151-179)||(2094317-2094345)
chr2 (151-179)||(7297171-7297199)
chr2 (193-221)||(9276433-9276461)
chr2 (193-221)||(9331624-9331652)
chr2 (147-179)||(27328399-27328431)
chr2 (151-179)||(36211254-36211282)
[»] chr5 (40 HSPs)
chr5 (149-227)||(8215715-8215793)
chr5 (150-227)||(4016121-4016198)
chr5 (150-227)||(6600384-6600461)
chr5 (150-227)||(38964019-38964096)
chr5 (193-227)||(38964332-38964366)
chr5 (193-227)||(41282201-41282235)
chr5 (193-226)||(1052395-1052428)
chr5 (151-227)||(6252131-6252207)
chr5 (143-227)||(16095858-16095942)
chr5 (151-227)||(19659407-19659483)
chr5 (194-227)||(20517018-20517051)
chr5 (151-227)||(26593528-26593604)
chr5 (193-225)||(6331236-6331268)
chr5 (147-179)||(14717417-14717449)
chr5 (152-227)||(41282501-41282576)
chr5 (147-178)||(16751958-16751989)
chr5 (149-227)||(27116342-27116420)
chr5 (193-227)||(6740203-6740237)
chr5 (149-179)||(11935292-11935322)
chr5 (193-227)||(11935604-11935638)
chr5 (149-179)||(17002452-17002482)
chr5 (193-227)||(19661879-19661913)
chr5 (193-227)||(20408392-20408426)
chr5 (150-227)||(20408692-20408769)
chr5 (150-227)||(26035271-26035348)
chr5 (193-227)||(28078353-28078387)
chr5 (193-227)||(31710141-31710175)
chr5 (149-179)||(35861501-35861531)
chr5 (193-227)||(42993377-42993411)
chr5 (193-227)||(43166508-43166542)
chr5 (149-178)||(3352298-3352327)
chr5 (146-179)||(6331190-6331223)
chr5 (193-226)||(14717464-14717497)
chr5 (194-227)||(14952213-14952246)
chr5 (147-227)||(33760718-33760798)
chr5 (195-227)||(6600086-6600118)
chr5 (151-179)||(11001024-11001052)
chr5 (195-227)||(20079505-20079537)
chr5 (143-179)||(27115997-27116033)
chr5 (151-179)||(33003248-33003276)
[»] scaffold0031 (1 HSPs)
scaffold0031 (193-227)||(101249-101283)
[»] scaffold0117 (1 HSPs)
scaffold0117 (148-179)||(14492-14523)
[»] scaffold1562 (1 HSPs)
scaffold1562 (146-176)||(780-810)
[»] scaffold1158 (1 HSPs)
scaffold1158 (146-176)||(1783-1813)
[»] scaffold1986 (1 HSPs)
scaffold1986 (151-179)||(293-321)
[»] scaffold0717 (1 HSPs)
scaffold0717 (146-178)||(2054-2086)
[»] scaffold0542 (1 HSPs)
scaffold0542 (195-227)||(2192-2224)
[»] scaffold0004 (1 HSPs)
scaffold0004 (147-179)||(219093-219125)


Alignment Details
Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 19934317 - 19934380
Alignment:
Q  61 ggattaaggttagggttttgagttttgaaatgacacgctcaattccaaatgaagataggattag 124  Q
    |||||| ||||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||    
T  19934317 ggattagggttagggttttgagttttgaaatgtcacgatcaatttcaactgaagataggattag 19934380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 19965456 - 19965519
Alignment:
Q  61 ggattaaggttagggttttgagttttgaaatgacacgctcaattccaaatgaagataggattag 124  Q
    |||||| ||||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||    
T  19965456 ggattagggttagggttttgagttttgaaatgtcacgatcaatttcaactgaagataggattag 19965519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 48629045 - 48628964
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  48629045 tatataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 48628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 47294197 - 47294273
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  47294197 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 47294273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 47294585 - 47294510
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  47294585 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaaaagtcccaaac 47294510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 31684431 - 31684353
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  31684431 ataggtcaaatgcatctaaaggtcctttaagttttgcattttttccaaagtggtcctttaagtttcaaaagtcccaaac 31684353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 39033876 - 39033954
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||    
T  39033876 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaaaagtcccaaac 39033954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 11476461 - 11476538
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  11476461 taggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaaaagtcccaaac 11476538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 42888763 - 42888797
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  42888763 ccaaagtcgtcctttaagtttcaaaagtcccaaac 42888797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 43968585 - 43968508
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||||||||||||             ||||||||||||||||||| ||||||||||||||    
T  43968585 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtgtcaaaagtcccaaa 43968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 44544268 - 44544302
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  44544268 ccaaagtcgtcctttaagtttcaaaagtcccaaac 44544302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 31684040 - 31684116
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  31684040 aggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctttaagtttcaaaagtcccaaac 31684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 47219337 - 47219304
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||||||    
T  47219337 caaagtcgtcctttaagtttcaaaagtcccaaac 47219304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 40851130 - 40851205
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  40851130 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 40851205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 47281453 - 47281422
Alignment:
Q  148 tataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||||    
T  47281453 tataggtcaaatgcatctaaaggtcctttaag 47281422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 223
Target Start/End: Complemental strand, 1469775 - 1469745
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtccc 223  Q
    |||||||||||||||||||||||||||||||    
T  1469775 ccaaagtcgtcctttaagtttcaaaagtccc 1469745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 11050209 - 11050243
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  11050209 ccaaagtggtcctttaagtttcaaaagtcccaaac 11050243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 30876452 - 30876418
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  30876452 ccaaagtggtcctttaagtttcaaaagtcccaaac 30876418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 30972194 - 30972160
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||| |||||||||||||||||||||||    
T  30972194 ccaaagtcgtcttttaagtttcaaaagtcccaaac 30972160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 34378556 - 34378590
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||| |||||||||||||||||    
T  34378556 ccaaagtcgtcctttaaatttcaaaagtcccaaac 34378590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 37393946 - 37393980
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  37393946 ccaaagtggtcctttaagtttcaaaagtcccaaac 37393980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 37394279 - 37394245
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  37394279 ccaaagtggtcctttaagtttcaaaagtcccaaac 37394245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 43968512 - 43968478
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  43968512 ccaaagtggtcctttaagtttcaaaagtcccaaac 43968478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 44544602 - 44544568
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||| ||||||||||||    
T  44544602 ccaaagtcgtcctttaagtttctaaagtcccaaac 44544568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 47218961 - 47219038
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||||| ||||||||||||||| |||||||||    
T  47218961 taggtcaaatgcatctaaaggtcctttaagttttacgtttttcccaaagtcgacctttaagtttcaaacgtcccaaac 47219038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 48628664 - 48628698
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  48628664 ccaaagtcgtcctttaagtttcaaaagtctcaaac 48628698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 2960589 - 2960622
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  2960589 caaagtggtcctttaagtttcaaaagtcccaaac 2960622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 27772982 - 27773058
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||| |||||||||| ||||||    
T  27772982 aggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaaatttcaaaagttccaaac 27773058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 33884214 - 33884247
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||| ||||||    
T  33884214 caaagtcgtcctttaagtttcaaaagtaccaaac 33884247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 45233710 - 45233677
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  45233710 caaagtcgtcctttaagtttcaaaagtctcaaac 45233677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 45723397 - 45723473
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             |||||||||| |||||||||||||||||| |||||    
T  45723397 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgttctttaagtttcaaaagtctcaaac 45723473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 47119880 - 47119913
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  47119880 caaagtggtcctttaagtttcaaaagtcccaaac 47119913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 221466 - 221434
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||| ||||||    
T  221466 aaagtcgtcctttaagtttcaaaagttccaaac 221434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 2960546 - 2960574
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  2960546 aggtcaaatgcatctaaaggtcctttaag 2960574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 11476880 - 11476852
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  11476880 aggtcaaatgcatctaaaggtcctttaag 11476852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 35600402 - 35600370
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  35600402 aaagtggtcctttaagtttcaaaagtcccaaac 35600370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 42979619 - 42979587
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||||||||||||||||||||||| |||||    
T  42979619 caaagtcgtcctttaagtttcaaaagttccaaa 42979587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 47119837 - 47119865
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  47119837 aggtcaaatgcatctaaaggtcctttaag 47119865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 16508227 - 16508147
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  16508227 atataggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 16508147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 28425269 - 28425345
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  28425269 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaaaagtcccaaac 28425345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 7651896 - 7651821
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  7651896 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 7651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 19274377 - 19274452
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  19274377 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 19274452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 22351032 - 22351107
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  22351032 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 22351107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 41105834 - 41105909
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  41105834 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 41105909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 48802236 - 48802313
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||    
T  48802236 taggtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtcgtcctttaagtttcaaaagtcccaaac 48802313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 52350177 - 52350143
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  52350177 ccaaagtcgtcctttaagtttcaaaagtcccaaac 52350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 19274798 - 19274765
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||||||    
T  19274798 tatataggtcaaatgcatctaaaggtcctttaag 19274765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 24204377 - 24204453
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             |||||||||| ||||||||||||||||||||||||    
T  24204377 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgttctttaagtttcaaaagtcccaaac 24204453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 25800876 - 25800800
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             || ||||||||||||||||||||||||||||||||    
T  25800876 aggtcaaatgcatctaaaggtcctttaagtttttctttttttccgaagtcgtcctttaagtttcaaaagtcccaaac 25800800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 37216756 - 37216789
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||||||    
T  37216756 caaagtcgtcctttaagtttcaaaagtcccaaac 37216789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 46051685 - 46051609
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  46051685 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaaaagtcccaaac 46051609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 23767694 - 23767662
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||    
T  23767694 aaagtcgtcctttaagtttcaaaagtcccaaac 23767662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 24204793 - 24204718
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||| ||||||||||||||||||||||||    
T  24204793 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgttctttaagtttcaaaagtcccaaac 24204718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 49594868 - 49594943
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||||||||||             ||||||| ||||||||||||||||||||||||||    
T  49594868 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaaaagtcccaaa 49594943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 50689832 - 50689864
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  50689832 ccaaagtcgtcctttaagtttcaaaagtcccaa 50689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 33673878 - 33673909
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||||||||||||||||||||||||||||    
T  33673878 aaagtcgtcctttaagtttcaaaagtcccaaa 33673909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 6711708 - 6711678
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||||    
T  6711708 ataggtcaaatgcatctaaaggtcctttaag 6711678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 9974701 - 9974735
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  9974701 ccaaagtggtcctttaagtttcaaaagtcccaaac 9974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 12142953 - 12142987
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||| ||||||||||||||||||||||||    
T  12142953 ccaaagtcgttctttaagtttcaaaagtcccaaac 12142987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 36158002 - 36157925
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||| ||||||||||||||||||||| |||||    
T  36158002 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaaaagtctcaaac 36157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 37217132 - 37217055
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             || | ||||||||||||||||||||||||||||||    
T  37217132 taggtcaaatgcatctaaaggtcctttaagtttttcattttttcctaggtcgtcctttaagtttcaaaagtcccaaac 37217055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 44978716 - 44978750
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  44978716 ccaaagtggtcctttaagtttcaaaagtcccaaac 44978750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 45670390 - 45670467
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||||||||||||||||| |||||||||             ||||||| ||||||||||||||||||||||||||    
T  45670390 ataggtcaaatgcatctaaagatcctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaagtcccaaa 45670467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 46825724 - 46825690
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||||    
T  46825724 ccaaactcgtcctttaagtttcaaaagtcccaaac 46825690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 50099079 - 50099113
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  50099079 ccaaagtggtcctttaagtttcaaaagtcccaaac 50099113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 50690136 - 50690102
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  50690136 ccaaagtcgtcctttaagtttcaaaagtctcaaac 50690102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 52146881 - 52146915
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  52146881 ccaaagtggtcctttaagtttcaaaagtcccaaac 52146915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 52350246 - 52350173
Alignment:
Q  153 gtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||||||||             |||||||||||||||||||||||||||| |||||    
T  52350246 gtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtcgtcctttaagtttcaaaagttccaaa 52350173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 6710961 - 6710994
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  6710961 caaagtggtcctttaagtttcaaaagtcccaaac 6710994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 7553298 - 7553265
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||||||| ||||||||||||||||||||||    
T  7553298 ccaaagtcgtcatttaagtttcaaaagtcccaaa 7553265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 17990048 - 17990015
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  17990048 caaagtcgtcctttaagtttcaaaagtctcaaac 17990015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 19274751 - 19274718
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||| ||||||||||||||||||||||    
T  19274751 caaagtcgtccgttaagtttcaaaagtcccaaac 19274718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 19315832 - 19315799
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  19315832 caaagtggtcctttaagtttcaaaagtcccaaac 19315799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 24036620 - 24036653
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||| |||||||||||||||||||||    
T  24036620 ccaaagtcgtccattaagtttcaaaagtcccaaa 24036653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 26549204 - 26549233
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  26549204 taggtcaaatgcatctaaaggtcctttaag 26549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 38473907 - 38473874
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  38473907 caaagtggtcctttaagtttcaaaagtcccaaac 38473874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 43396867 - 43396834
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  43396867 caaagtcgtcctttaagtttcaaaagtctcaaac 43396834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 45350666 - 45350699
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  45350666 caaagtcgtcctttaagtttcaaaagtctcaaac 45350699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 45670790 - 45670753
Alignment:
Q  142 ttattatataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  45670790 ttattttataggacaaatgcatctaaaggtcctttaag 45670753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 46051338 - 46051371
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||| ||||||||||||||||||||||||||    
T  46051338 ccaaagtggtcctttaagtttcaaaagtcccaaa 46051371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 49973802 - 49973835
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||| |||||||||||||||||||||||||||||    
T  49973802 caaaatcgtcctttaagtttcaaaagtcccaaac 49973835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 19315500 - 19315532
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||| ||||||||||||||||    
T  19315500 caaagtcgtcctttaaatttcaaaagtcccaaa 19315532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 25988552 - 25988520
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||| |||||    
T  25988552 aaagtcgtcctttaagtttcaaaagtctcaaac 25988520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 26070084 - 26070052
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||||||||| ||||    
T  26070084 caaagtcgtcctttaagtttcaaaagtctcaaa 26070052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 26549579 - 26549547
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||| |||||    
T  26549579 aaagtcgtcctttaagtttcaaaagtctcaaac 26549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 33194902 - 33194870
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  33194902 aaagtggtcctttaagtttcaaaagtcccaaac 33194870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 34971303 - 34971275
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  34971303 aggtcaaatgcatctaaaggtcctttaag 34971275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 36781423 - 36781391
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  36781423 aaagtggtcctttaagtttcaaaagtcccaaac 36781391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 21656760 - 21656677
Alignment:
Q  144 attatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  21656760 attatataggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaagtcccaaac 21656677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 50287381 - 50287459
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  50287381 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 50287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 1016890 - 1016966
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  1016890 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 1016966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 29677710 - 29677635
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  29677710 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 29677635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 20760396 - 20760319
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||| |||||||||||||||||||||||||||||    
T  20760396 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaaatcgtcctttaagtttcaaaagtcccaaac 20760319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 27071021 - 27070987
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  27071021 ccaaagtcgtcctttaagtttcaaaagtcccaaac 27070987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 33151961 - 33151884
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  33151961 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 33151884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 22851856 - 22851889
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||||||    
T  22851856 caaagtcgtcctttaagtttcaaaagtcccaaac 22851889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 36315296 - 36315220
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  36315296 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaaaagtcccaaac 36315220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 1687498 - 1687573
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             ||||||||||| |||||||||||||||||||||||    
T  1687498 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaaaagtcccaaac 1687573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 224
Target Start/End: Complemental strand, 1017237 - 1017206
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtccca 224  Q
    ||||||||||||||||||||||||||||||||    
T  1017237 ccaaagtcgtcctttaagtttcaaaagtccca 1017206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 19664356 - 19664434
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||              |||||| |||||||||||||||||||||||||||    
T  19664356 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaaaagtcccaaac 19664434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 3697005 - 3697039
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  3697005 ccaaagtggtcctttaagtttcaaaagtcccaaac 3697039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 19268720 - 19268686
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  19268720 ccaaagtggtcctttaagtttcaaaagtcccaaac 19268686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 20760019 - 20760053
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  20760019 ccaaagtcgtcctttaagtttcaaaagtctcaaac 20760053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 20813766 - 20813689
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||              ||||||| |||||||||||||||||||||||||||    
T  20813766 taggtcaaatgcatctaaaggtcctttaaatttttcgtttttcccaaagtggtcctttaagtttcaaaagtcccaaac 20813689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 21564689 - 21564655
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  21564689 ccaaagtggtcctttaagtttcaaaagtcccaaac 21564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 27070687 - 27070721
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  27070687 ccaaagtcgtcctttaagtttcaaaagtctcaaac 27070721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 28699858 - 28699824
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  28699858 ccaaagtggtcctttaagtttcaaaagtcccaaac 28699824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 47329456 - 47329422
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  47329456 ccaaagtggtcctttaagtttcaaaagtcccaaac 47329422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 1687887 - 1687858
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  1687887 taggtcaaatgcatctaaaggtcctttaag 1687858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 21564341 - 21564370
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  21564341 taggtcaaatgcatctaaaggtcctttaag 21564370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 31122903 - 31122870
Alignment:
Q  145 ttatataggtcaaatgcatctaaaggtcctttaa 178  Q
    |||| |||||||||||||||||||||||||||||    
T  31122903 ttatttaggtcaaatgcatctaaaggtcctttaa 31122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 35608382 - 35608349
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||| ||||||||    
T  35608382 caaagtcgtcctttaagtttcaaaattcccaaac 35608349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 39069616 - 39069649
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  39069616 caaagtcgtcctttaagtttcaaaagtctcaaac 39069649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 53926262 - 53926229
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||| |||||||||||||||||||||    
T  53926262 ccaaagtcgtccattaagtttcaaaagtcccaaa 53926229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 1448641 - 1448669
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  1448641 aggtcaaatgcatctaaaggtcctttaag 1448669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 8097256 - 8097228
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  8097256 aggtcaaatgcatctaaaggtcctttaag 8097228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 10618731 - 10618699
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  10618731 aaagtggtcctttaagtttcaaaagtcccaaac 10618699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 35346421 - 35346453
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  35346421 aaagtggtcctttaagtttcaaaagtcccaaac 35346453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 38446294 - 38446322
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  38446294 aggtcaaatgcatctaaaggtcctttaag 38446322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 44152517 - 44152545
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  44152517 aggtcaaatgcatctaaaggtcctttaag 44152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 44152908 - 44152880
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  44152908 aggtcaaatgcatctaaaggtcctttaag 44152880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 49799017 - 49799045
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  49799017 aggtcaaatgcatctaaaggtcctttaag 49799045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 28264880 - 28264802
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  28264880 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 28264802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 26017268 - 26017345
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  26017268 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagtttcaaaagtcccaaac 26017345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 31208566 - 31208641
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  31208566 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 31208641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 17993270 - 17993236
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  17993270 ccaaagtcgtcctttaagtttcaaaagtcccaaac 17993236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 19496427 - 19496393
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  19496427 ccaaagtcgtcctttaagtttcaaaagtcccaaac 19496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 44490512 - 44490478
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  44490512 ccaaagtcgtcctttaagtttcaaaagtcccaaac 44490478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 49118804 - 49118770
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  49118804 ccaaagtcgtcctttaagtttcaaaagtcccaaac 49118770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 28264489 - 28264565
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             |||||||||| ||||||||||||||||||||||||    
T  28264489 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgttctttaagtttcaaaagtcccaaac 28264565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 48707985 - 48707952
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||||||    
T  48707985 caaagtcgtcctttaagtttcaaaagtcccaaac 48707952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 2055094 - 2055130
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||| ||||||||||||||||||||||||||||||    
T  2055094 tattatttaggtcaaatgcatctaaaggtcctttaag 2055130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 5227627 - 5227549
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||             ||||||| || ||||||||||||||||||||||||    
T  5227627 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggttctttaagtttcaaaagtcccaaac 5227549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 12196714 - 12196628
Alignment:
Q  141 attattatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||| ||| ||||| ||||||||||||||||||||||||             |||||||||||||||||| ||||||||||||||||    
T  12196714 attaatatttaggtgaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagcttcaaaagtcccaaac 12196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 25734546 - 25734472
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||||||||||||||||||||||||             ||||||||||| ||||||||||||||||||||||    
T  25734546 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaaaagtcccaaa 25734472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 12196337 - 12196371
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  12196337 ccaaagtcgtcctttaagtttcaaaagtcacaaac 12196371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 17847449 - 17847372
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||| |||||||| ||||||||||||||||||    
T  17847449 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaggtttcaaaagtcccaaac 17847372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 17993339 - 17993266
Alignment:
Q  153 gtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||||||||             |||||||||||||||||||||||||||| |||||    
T  17993339 gtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtcgtcctttaagtttcaaaagttccaaa 17993266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 22298335 - 22298412
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             |||||||  ||||||||||||||||||||||||||    
T  22298335 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtgttcctttaagtttcaaaagtcccaaac 22298412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 25730433 - 25730399
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  25730433 ccaaagtcgtcctttaagtttcaaaagtctcaaac 25730399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 30141403 - 30141373
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||||    
T  30141403 ataggtcaaatgcatctaaaggtcctttaag 30141373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 31590936 - 31590970
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| ||||||    
T  31590936 ccaaagtcgtcctttaagtttcaaaagttccaaac 31590970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 31591268 - 31591234
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  31591268 ccaaagtcgtcctttaagtttcaaaagtctcaaac 31591234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 32118573 - 32118607
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  32118573 ccaaagtggtcctttaagtttcaaaagtcccaaac 32118607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 55517133 - 55517167
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  55517133 ccaaagtcgtcctttaagtttcaaaagtctcaaac 55517167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 9339072 - 9339105
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  9339072 caaagtcgtcctttaagtttcaaaagtctcaaac 9339105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 10588772 - 10588739
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  10588772 caaagtggtcctttaagtttcaaaagtcccaaac 10588739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 11795103 - 11795136
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  11795103 caaagtggtcctttaagtttcaaaagtcccaaac 11795136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 15985202 - 15985169
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  15985202 caaagtggtcctttaagtttcaaaagtcccaaac 15985169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 19169091 - 19169062
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  19169091 taggtcaaatgcatctaaaggtcctttaag 19169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 19496471 - 19496442
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  19496471 taggtcaaatgcatctaaaggtcctttaag 19496442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 20534435 - 20534402
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||| ||||||    
T  20534435 tatataggtcaaatgcatctaaaggtcatttaag 20534402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 28160280 - 28160251
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  28160280 taggtcaaatgcatctaaaggtcctttaag 28160251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 33173926 - 33174002
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||||||| ||||||||||||||||| |||||    
T  33173926 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcatttaagtttcaaaagtctcaaac 33174002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 33808061 - 33808028
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||| |||||||||||||||||    
T  33808061 caaagtcgtcctttaattttcaaaagtcccaaac 33808028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 42273647 - 42273676
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  42273647 taggtcaaatgcatctaaaggtcctttaag 42273676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 44490070 - 44490103
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  44490070 caaagtcgtcctttaagtttcaaaagtctcaaac 44490103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 48552049 - 48551965
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||| |||||||||||||||||||||||| |||||||             ||||||| ||||||||||||||||||||| |||||    
T  48552049 tattttataggtcaaatgcatctaaaggttctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaagtctcaaac 48551965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 48707682 - 48707715
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  48707682 caaagtcgtcctttaagtttcaaaagtctcaaac 48707715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 49118500 - 49118533
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  49118500 caaagtcgtcctttaagtttcaaaagtctcaaac 49118533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 50276460 - 50276431
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  50276460 taggtcaaatgcatctaaaggtcctttaag 50276431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 8881963 - 8881995
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  8881963 aaagtggtcctttaagtttcaaaagtcccaaac 8881995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 8882339 - 8882311
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaa 178  Q
    |||||||||||||||||||||||||||||    
T  8882339 taggtcaaatgcatctaaaggtcctttaa 8882311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 9800430 - 9800398
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  9800430 aaagtggtcctttaagtttcaaaagtcccaaac 9800398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 17847003 - 17847031
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  17847003 aggtcaaatgcatctaaaggtcctttaag 17847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 36444588 - 36444616
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  36444588 aggtcaaatgcatctaaaggtcctttaag 36444616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 51371400 - 51371372
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  51371400 aggtcaaatgcatctaaaggtcctttaag 51371372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 56555468 - 56555440
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  56555468 aggtcaaatgcatctaaaggtcctttaag 56555440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 5834 - 5759
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  5834 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 22684282 - 22684207
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  22684282 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaac 22684207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 35443548 - 35443470
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  35443548 ataggtcaaatgcatctaaaggtcctttaagattttcatttttcccaaagtggtcctttaagtttcaaaagtcccaaac 35443470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 259866 - 259900
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  259866 ccaaagtcgtcctttaagtttcaaaagtcccaaac 259900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 656055 - 656021
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  656055 ccaaagtcgtcctttaagtttcaaaagtcccaaac 656021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 841790 - 841756
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  841790 ccaaagtcgtcctttaagtttcaaaagtcccaaac 841756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 3876101 - 3876067
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  3876101 ccaaagtcgtcctttaagtttcaaaagtcccaaac 3876067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 22683936 - 22683970
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  22683936 ccaaagtcgtcctttaagtttcaaaagtcccaaac 22683970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 36400018 - 36400052
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  36400018 ccaaagtcgtcctttaagtttcaaaagtcccaaac 36400052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 37933530 - 37933564
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  37933530 ccaaagtcgtcctttaagtttcaaaagtcccaaac 37933564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 2533131 - 2533164
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||||||||||||||||||||||||||||||    
T  2533131 ccaaagtcgtcctttaagtttcaaaagtcccaaa 2533164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 24430904 - 24430868
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24430904 tattttataggtcaaatgcatctaaaggtcctttaag 24430868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 38107338 - 38107259
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||| ||||||||||             || |||||||||||||||||||||||||||||||    
T  38107338 atataggtcaaatgcatctaaatgtcctttaagtttttcatttttcccgaagtcgtcctttaagtttcaaaagtcccaaa 38107259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 513167 - 513201
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| ||||||    
T  513167 ccaaagtcgtcctttaagtttcaaaagtaccaaac 513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 513500 - 513466
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  513500 ccaaagtcgtcctttaagtttcaaaagtctcaaac 513466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 2533160 - 2533194
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||| ||||    
T  2533160 ccaaagtcgtcctttaagtttcaaaagtcctaaac 2533194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 5720425 - 5720455
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||||    
T  5720425 ataggtcaaatgcatctaaaggtcctttaag 5720455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 12010745 - 12010711
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  12010745 ccaaagtggtcctttaagtttcaaaagtcccaaac 12010711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 13797281 - 13797247
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  13797281 ccaaagtcgtcctttaagtttcaaaagtctcaaac 13797247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 15846954 - 15847031
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||| ||||||    
T  15846954 taggtcaaatgcatctaaaggtcctttaagttgttcgtttttcccaaagtggtcctttaagtttcaaaagttccaaac 15847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 35443169 - 35443203
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  35443169 ccaaagtggtcctttaagtttcaaaagtcccaaac 35443203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 37933835 - 37933801
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  37933835 ccaaagtcgtcctttaagtttcaaaagtctcaaac 37933801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 8137367 - 8137338
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  8137367 taggtcaaatgcatctaaaggtcctttaag 8137338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 41536476 - 41536509
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||| |||||||||||||||||||||||    
T  41536476 caaagtcgtcttttaagtttcaaaagtcccaaac 41536509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 43468908 - 43468937
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  43468908 taggtcaaatgcatctaaaggtcctttaag 43468937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 441031 - 440999
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  441031 aaagttgtcctttaagtttcaaaagtcccaaac 440999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 9884673 - 9884701
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  9884673 aggtcaaatgcatctaaaggtcctttaag 9884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 24430477 - 24430505
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  24430477 aggtcaaatgcatctaaaggtcctttaag 24430505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 33651701 - 33651733
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||| ||||||||||||||||||||||    
T  33651701 caaagtcgtcttttaagtttcaaaagtcccaaa 33651733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 33652076 - 33652048
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  33652076 aggtcaaatgcatctaaaggtcctttaag 33652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 38633608 - 38633644
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  38633608 tattatataggtcaaatgcgtctaaaggtcttttaag 38633644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 41536433 - 41536461
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  41536433 aggtcaaatgcatctaaaggtcctttaag 41536461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 26393333 - 26393258
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||    
T  26393333 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtcccaaa 26393258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 6503577 - 6503611
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  6503577 ccaaagtcgtcctttaagtttcaaaagtcccaaac 6503611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 17943276 - 17943195
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| ||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  17943276 tatattggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaaaagtcccaaac 17943195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 12613153 - 12613069
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||||             |||||||  ||||||||||||||||||||||||||    
T  12613153 tattatataggtcaaatgcatctaaaggttctttaagtttttcatttttcccaaagtgatcctttaagtttcaaaagtcccaaac 12613069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 12626871 - 12626795
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  12626871 aggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctttaagtttcaaaagtcccaaac 12626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 2707693 - 2707618
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  2707693 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 2707618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 2643927 - 2644005
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaa 225  Q
    |||| ||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||    
T  2643927 atatgggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaagtcccaa 2644005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 35224217 - 35224139
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||| ||||||||||             ||||||||||||||||||||||||||||| |||||    
T  35224217 ataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 35224139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 1915291 - 1915325
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||| ||||||||||||    
T  1915291 ccaaagtcgtcctttaagtttccaaagtcccaaac 1915325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 1915625 - 1915591
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| ||||||    
T  1915625 ccaaagtcgtcctttaagtttcaaaagttccaaac 1915591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 2390153 - 2390187
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  2390153 ccaaagtcgtcctttaagtttcaaaagtctcaaac 2390187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 2707347 - 2707381
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||| ||||||||||||||    
T  2707347 ccaaagtcgtcctttaagttccaaaagtcccaaac 2707381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 3258755 - 3258789
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  3258755 ccaaagtggtcctttaagtttcaaaagtcccaaac 3258789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 6503911 - 6503877
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  6503911 ccaaagtcgtcctttaagtttcaaaagtctcaaac 6503877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 12626495 - 12626529
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  12626495 ccaaagtggtcctttaagtttcaaaagtcccaaac 12626529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 26196632 - 26196598
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  26196632 ccaaagtagtcctttaagtttcaaaagtcccaaac 26196598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 29050465 - 29050431
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  29050465 ccaaagtggtcctttaagtttcaaaagtcccaaac 29050431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 1077094 - 1077127
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  1077094 caaagtggtcctttaagtttcaaaagtcccaaac 1077127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 2598005 - 2598034
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  2598005 taggtcaaatgcatctaaaggtcctttaag 2598034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 8178198 - 8178231
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||| |||||||||||||    
T  8178198 caaagtcgtcctttaagttttaaaagtcccaaac 8178231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 2390456 - 2390424
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||| ||||||||||||||||||||||||    
T  2390456 aaagtcgttctttaagtttcaaaagtcccaaac 2390424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 8178526 - 8178498
Alignment:
Q  199 tcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||    
T  8178526 tcgtcctttaagtttcaaaagtcccaaac 8178498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 25820503 - 25820531
Alignment:
Q  199 tcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||    
T  25820503 tcgtcctttaagtttcaaaagtcccaaac 25820531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 41178342 - 41178267
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  41178342 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagtttcaaaagtcccaaac 41178267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 3358098 - 3358132
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  3358098 ccaaagtcgtcctttaagtttcaaaagtcccaaac 3358132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 41177983 - 41178017
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  41177983 ccaaagtcgtcctttaagtttcaaaagtcccaaac 41178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 920839 - 920915
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||| |||||||||    
T  920839 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaacgtcccaaac 920915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 37838536 - 37838456
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||             | ||||||||||||||||||||||||||| |||||    
T  37838536 atataggtcaaatgcatctaaaggtcctttaagtttttcatttttcctaaagtcgtcctttaagtttcaaaagtctcaaac 37838456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 771883 - 771958
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  771883 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaaaagtcccaaac 771958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 9276765 - 9276733
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||    
T  9276765 aaagtcgtcctttaagtttcaaaagtcccaaac 9276733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 9331947 - 9331915
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||    
T  9331947 aaagtcgtcctttaagtttcaaaagtcccaaac 9331915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 12759657 - 12759732
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  12759657 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 12759732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 16246516 - 16246441
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  16246516 ggtcaaatgcatctaaaggtcctttaagtttttcgtttgtcccaaagttgtcctttaagtttcaaaagtcccaaac 16246441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 23671710 - 23671746
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||| ||||||||||||||||||||||||||||||||    
T  23671710 tattttataggtcaaatgcatctaaaggtcctttaag 23671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 2057163 - 2057132
Alignment:
Q  148 tataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||||    
T  2057163 tataggtcaaatgcatctaaaggtcctttaag 2057132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 27328822 - 27328791
Alignment:
Q  148 tataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||||    
T  27328822 tataggtcaaatgcatctaaaggtcctttaag 27328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 37654332 - 37654301
Alignment:
Q  148 tataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||||    
T  37654332 tataggtcaaatgcatctaaaggtcctttaag 37654301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 2455869 - 2455903
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  2455869 ccaaagtcgtcctttaagtttcaaaagtcgcaaac 2455903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 7297514 - 7297480
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||| |||||||||||||||||||||||    
T  7297514 ccaaagtcgtcttttaagtttcaaaagtcccaaac 7297480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 8899541 - 8899575
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||||    
T  8899541 ccaaaatcgtcctttaagtttcaaaagtcccaaac 8899575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 12760031 - 12759997
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||| |||||||||||||||||||||||    
T  12760031 ccaaagtcgtcttttaagtttcaaaagtcccaaac 12759997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 19180281 - 19180315
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  19180281 ccaaagtcgtcctttaagtttcaaaagtctcaaac 19180315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 19180614 - 19180580
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| ||||||    
T  19180614 ccaaagtcgtcctttaagtttcaaaagttccaaac 19180580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 28650331 - 28650408
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             | ||||||||||||||||||||||||||| |||||    
T  28650331 taggtcaaatgcatctaaaggtcctttaagtttttcattttccctaaagtcgtcctttaagtttcaaaagtctcaaac 28650408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 33106917 - 33106951
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  33106917 ccaaagtcgtcctttaagtttcaaaagtctcaaac 33106951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 36444176 - 36444210
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  36444176 ccaaagtcgtcctttaagtttcaaaagtctcaaac 36444210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 40854802 - 40854768
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  40854802 ccaaagtggtcctttaagtttcaaaagtcccaaac 40854768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 41500775 - 41500741
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  41500775 ccaaagtggtcctttaagtttcaaaagtcccaaac 41500741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 8899873 - 8899840
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  8899873 caaagtcgtcctttaagtttcaaaagtctcaaac 8899840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 17484499 - 17484532
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  17484499 caaagtggtcctttaagtttcaaaagtcccaaac 17484532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 22066567 - 22066600
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtccttt 176  Q
    ||||| ||||||||||||||||||||||||||||    
T  22066567 tattacataggtcaaatgcatctaaaggtccttt 22066600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 33107251 - 33107218
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    |||||||||||||||||||||||||||| |||||    
T  33107251 ccaaagtcgtcctttaagtttcaaaagttccaaa 33107218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 36444509 - 36444476
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| |||||    
T  36444509 caaagtcgtcctttaagtttcaaaagtctcaaac 36444476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 37732099 - 37732175
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||||||| ||||||||||||||||| |||||    
T  37732099 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcttttaagtttcaaaagtctcaaac 37732175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 37838140 - 37838173
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| ||||||||||||||||||||||||||    
T  37838140 caaagtcatcctttaagtttcaaaagtcccaaac 37838173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 38750863 - 38750892
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||    
T  38750863 taggtcaaatgcatctaaaggtcctttaag 38750892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 42629845 - 42629878
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  42629845 caaagtggtcctttaagtttcaaaagtcccaaac 42629878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 2094317 - 2094345
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  2094317 aggtcaaatgcatctaaaggtcctttaag 2094345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 7297171 - 7297199
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  7297171 aggtcaaatgcatctaaaggtcctttaag 7297199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 9276433 - 9276461
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtc 221  Q
    |||||||||||||||||||||||||||||    
T  9276433 ccaaagtcgtcctttaagtttcaaaagtc 9276461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 9331624 - 9331652
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtc 221  Q
    |||||||||||||||||||||||||||||    
T  9331624 ccaaagtcgtcctttaagtttcaaaagtc 9331652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 27328399 - 27328431
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||| ||||||||||    
T  27328399 atataggtcaaatgcatctaaatgtcctttaag 27328431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 36211282 - 36211254
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  36211282 aggtcaaatgcatctaaaggtcctttaag 36211254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 8215715 - 8215793
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||| ||||||    
T  8215715 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagttccaaac 8215793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 4016198 - 4016121
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||| ||||||    
T  4016198 taggtcaaatgcatctaaaggtcctttaagttattcgtttttcccaaagtcgtcctttaagtttcaaaagtaccaaac 4016121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 6600461 - 6600384
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||| |||||||||||||||||||||||||||    
T  6600461 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaaaagtcccaaac 6600384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 38964019 - 38964096
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  38964019 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 38964096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 38964366 - 38964332
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  38964366 ccaaagtcgtcctttaagtttcaaaagtcccaaac 38964332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 41282201 - 41282235
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  41282201 ccaaagtcgtcctttaagtttcaaaagtcccaaac 41282235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 1052395 - 1052428
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||||||||||||||||||||||||||||||    
T  1052395 ccaaagtcgtcctttaagtttcaaaagtcccaaa 1052428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 6252207 - 6252131
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  6252207 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 6252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 16095858 - 16095942
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| ||||||||||||||||||| ||||||||||             | |||||||||||||||||||||||||||||||||    
T  16095858 tattatgtaggtcaaatgcatctaaaagtcctttaagtttttcatttttccaaaagtcgtcctttaagtttcaaaagtcccaaac 16095942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 19659407 - 19659483
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  19659407 aggtcaaatgcatctaaaggtcctttaagttttttatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 19659483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 20517018 - 20517051
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||||||    
T  20517018 caaagtcgtcctttaagtttcaaaagtcccaaac 20517051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 26593604 - 26593528
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||             ||||||||| |||||||||||||||||||||||||    
T  26593604 aggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgccctttaagtttcaaaagtcccaaac 26593528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 6331236 - 6331268
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaa 225  Q
    |||||||||||||||||||||||||||||||||    
T  6331236 ccaaagtcgtcctttaagtttcaaaagtcccaa 6331268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 14717417 - 14717449
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||||||    
T  14717417 atataggtcaaatgcatctaaaggtcctttaag 14717449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 41282576 - 41282501
Alignment:
Q  152 ggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||| |||||    
T  41282576 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagtctcaaac 41282501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 178
Target Start/End: Original strand, 16751958 - 16751989
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaa 178  Q
    ||||||||||||||||||||||||||||||||    
T  16751958 atataggtcaaatgcatctaaaggtcctttaa 16751989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 27116420 - 27116342
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||| ||||||||||             ||||||| |||||||||||||||||||||||||||    
T  27116420 ataggtcaaatgcatctaaaagtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaaaagtcccaaac 27116342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 6740237 - 6740203
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  6740237 ccaaagtggtcctttaagtttcaaaagtcccaaac 6740203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 11935292 - 11935322
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||||    
T  11935292 ataggtcaaatgcatctaaaggtcctttaag 11935322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 11935638 - 11935604
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  11935638 ccaaagtcgtcctttaagtttcaaaagtctcaaac 11935604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 17002482 - 17002452
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||||    
T  17002482 ataggtcaaatgcatctaaaggtcctttaag 17002452  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 19661913 - 19661879
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  19661913 ccaaagttgtcctttaagtttcaaaagtcccaaac 19661879  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 20408392 - 20408426
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  20408392 ccaaagtggtcctttaagtttcaaaagtcccaaac 20408426  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 20408769 - 20408692
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||| | |||||||||||||||||||||||||||    
T  20408769 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaaatggtcctttaagtttcaaaagtcccaaac 20408692  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 26035271 - 26035348
Alignment:
Q  150 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||||||||||||||||||||||||||             ||||||| ||||||||| |||||||||||||||||    
T  26035271 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaaatttcaaaagtcccaaac 26035348  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 28078353 - 28078387
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  28078353 ccaaagtggtcctttaagtttcaaaagtcccaaac 28078387  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 31710141 - 31710175
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  31710141 ccaaagtggtcctttaagtttcaaaagtcccaaac 31710175  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 35861531 - 35861501
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||||    
T  35861531 ataggtcaaatgcatctaaaggtcctttaag 35861501  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 42993377 - 42993411
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  42993377 ccaaagtggtcctttaagtttcaaaagtcccaaac 42993411  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 43166542 - 43166508
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||| ||||||    
T  43166542 ccaaagtcgtcctttaagtttcaaaagttccaaac 43166508  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 3352327 - 3352298
Alignment:
Q  149 ataggtcaaatgcatctaaaggtcctttaa 178  Q
    ||||||||||||||||||||||||||||||    
T  3352327 ataggtcaaatgcatctaaaggtcctttaa 3352298  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 6331190 - 6331223
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||| ||||||||||    
T  6331190 tatataggtcaaatgcatctaaatgtcctttaag 6331223  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 14717464 - 14717497
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaa 226  Q
    ||||||| ||||||||||||||||||||||||||    
T  14717464 ccaaagtggtcctttaagtttcaaaagtcccaaa 14717497  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 14952213 - 14952246
Alignment:
Q  194 caaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||| |||||||||||||||||||||||||||    
T  14952213 caaagtggtcctttaagtttcaaaagtcccaaac 14952246  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 33760798 - 33760718
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||| ||||||||||             ||||||||||||||||| ||||||||||| |||||    
T  33760798 atataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctttaattttcaaaagtctcaaac 33760718  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 6600086 - 6600118
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  6600086 aaagtggtcctttaagtttcaaaagtcccaaac 6600118  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 11001052 - 11001024
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  11001052 aggtcaaatgcatctaaaggtcctttaag 11001024  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 20079537 - 20079505
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  20079537 aaagtggtcctttaagtttcaaaagtcccaaac 20079505  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 27115997 - 27116033
Alignment:
Q  143 tattatataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||| |||||||||| |||||||    
T  27115997 tattatataggtcaaatgtatctaaaggttctttaag 27116033  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 33003276 - 33003248
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  33003276 aggtcaaatgcatctaaaggtcctttaag 33003248  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 101283 - 101249
Alignment:
Q  193 ccaaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    |||||||||||||||||||||||||||||||||||    
T  101283 ccaaagtcgtcctttaagtttcaaaagtcccaaac 101249  T

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Target: scaffold0117 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Original strand, 14492 - 14523
Alignment:
Q  148 tataggtcaaatgcatctaaaggtcctttaag 179  Q
    ||||||||||||||||||||||||||||||||    
T  14492 tataggtcaaatgcatctaaaggtcctttaag 14523  T

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Target: scaffold1562 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 176
Target Start/End: Complemental strand, 810 - 780
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtccttt 176  Q
    |||||||||||||||||||||||||||||||    
T  810 tatataggtcaaatgcatctaaaggtccttt 780  T

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Target: scaffold1158 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 1783 - 1813
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtccttt 176  Q
    |||||||||||||||||||||||||||||||    
T  1783 tatataggtcaaatgcatctaaaggtccttt 1813  T

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Target: scaffold1986 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 321 - 293
Alignment:
Q  151 aggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||||||||||||||||||||||||||    
T  321 aggtcaaatgcatctaaaggtcctttaag 293  T

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Target: scaffold0717 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 2086 - 2054
Alignment:
Q  146 tatataggtcaaatgcatctaaaggtcctttaa 178  Q
    ||||||||||||||||||| |||||||||||||    
T  2086 tatataggtcaaatgcatcaaaaggtcctttaa 2054  T

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Target: scaffold0542 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 2224 - 2192
Alignment:
Q  195 aaagtcgtcctttaagtttcaaaagtcccaaac 227  Q
    ||||| |||||||||||||||||||||||||||    
T  2224 aaagtggtcctttaagtttcaaaagtcccaaac 2192  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 219125 - 219093
Alignment:
Q  147 atataggtcaaatgcatctaaaggtcctttaag 179  Q
    |||||| ||||||||||||||||||||||||||    
T  219125 atatagatcaaatgcatctaaaggtcctttaag 219093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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