View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14475_low_11 (Length: 420)

Name: NF14475_low_11
Description: NF14475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14475_low_11
NF14475_low_11
[»] chr1 (65 HSPs)
chr1 (13-153)||(12143072-12143213)
chr1 (13-153)||(7553016-7553157)
chr1 (13-153)||(23767414-23767555)
chr1 (13-153)||(19315640-19315781)
chr1 (13-153)||(38473626-38473767)
chr1 (13-153)||(41106016-41106157)
chr1 (13-153)||(46825531-46825672)
chr1 (13-153)||(7651662-7651803)
chr1 (13-153)||(28425363-28425504)
chr1 (17-153)||(49094711-49094848)
chr1 (13-152)||(19274559-19274699)
chr1 (13-153)||(36157678-36157818)
chr1 (15-153)||(25988271-25988410)
chr1 (15-153)||(49814302-49814441)
chr1 (17-153)||(45350717-45350852)
chr1 (13-153)||(33325727-33325868)
chr1 (13-153)||(50689943-50690084)
chr1 (13-153)||(16705870-16706011)
chr1 (13-153)||(26549388-26549529)
chr1 (13-153)||(33674017-33674158)
chr1 (13-153)||(46051450-46051591)
chr1 (13-153)||(48802331-48802472)
chr1 (15-153)||(36781172-36781311)
chr1 (17-153)||(9878784-9878921)
chr1 (13-153)||(23228194-23228335)
chr1 (17-153)||(26069896-26070033)
chr1 (13-153)||(52146993-52147134)
chr1 (13-117)||(12964646-12964750)
chr1 (17-132)||(48319067-48319183)
chr1 (13-152)||(50533383-50533523)
chr1 (17-153)||(45670486-45670623)
chr1 (13-150)||(24204474-24204612)
chr1 (13-153)||(7608766-7608907)
chr1 (17-153)||(9962755-9962892)
chr1 (13-153)||(18892329-18892470)
chr1 (13-153)||(43396675-43396816)
chr1 (17-153)||(48669396-48669533)
chr1 (13-153)||(52349924-52350065)
chr1 (13-152)||(18917524-18917664)
chr1 (17-151)||(41982237-41982372)
chr1 (17-118)||(9974846-9974947)
chr1 (13-153)||(17983898-17984039)
chr1 (17-153)||(37216900-37217037)
chr1 (13-153)||(46095075-46095216)
chr1 (18-153)||(5400876-5401011)
chr1 (13-153)||(6711440-6711581)
chr1 (17-153)||(8141486-8141623)
chr1 (17-153)||(21965069-21965206)
chr1 (13-118)||(33194687-33194792)
chr1 (17-153)||(34971084-34971221)
chr1 (13-114)||(52067691-52067792)
chr1 (17-153)||(25800648-25800782)
chr1 (18-153)||(33714361-33714495)
chr1 (17-153)||(18782089-18782226)
chr1 (13-153)||(40721342-40721484)
chr1 (17-118)||(16506824-16506925)
chr1 (13-118)||(30281631-30281736)
chr1 (18-153)||(21929526-21929667)
chr1 (13-91)||(50099220-50099298)
chr1 (13-61)||(44979281-44979329)
chr1 (13-57)||(32373650-32373694)
chr1 (53-153)||(44978768-44978868)
chr1 (15-57)||(17989864-17989906)
chr1 (13-43)||(49973942-49973972)
chr1 (219-248)||(36781077-36781106)
[»] chr7 (47 HSPs)
chr7 (13-153)||(35600122-35600263)
chr7 (13-153)||(47281124-47281265)
chr7 (13-153)||(47294291-47294432)
chr7 (13-152)||(44544409-44544549)
chr7 (13-153)||(1469493-1469634)
chr7 (13-153)||(27364339-27364480)
chr7 (13-153)||(47271981-47272122)
chr7 (13-152)||(47219145-47219285)
chr7 (13-153)||(30798368-30798509)
chr7 (13-153)||(31684134-31684275)
chr7 (13-153)||(38427563-38427704)
chr7 (13-153)||(48628805-48628946)
chr7 (17-152)||(33884323-33884459)
chr7 (13-153)||(8162712-8162853)
chr7 (13-153)||(11476556-11476697)
chr7 (13-153)||(23842305-23842446)
chr7 (13-153)||(30876259-30876400)
chr7 (17-153)||(37393998-37394135)
chr7 (13-153)||(40851274-40851415)
chr7 (13-153)||(41139408-41139553)
chr7 (13-153)||(45723491-45723632)
chr7 (13-153)||(43752776-43752917)
chr7 (26-153)||(2960640-2960768)
chr7 (13-153)||(30971941-30972082)
chr7 (13-153)||(41113377-41113518)
chr7 (13-153)||(42979338-42979479)
chr7 (13-153)||(43968259-43968400)
chr7 (17-153)||(44800410-44800547)
chr7 (13-153)||(47119991-47120134)
chr7 (17-148)||(4923220-4923352)
chr7 (13-118)||(3797559-3797664)
chr7 (17-153)||(11050261-11050398)
chr7 (13-110)||(47579131-47579228)
chr7 (18-153)||(7336065-7336200)
chr7 (36-153)||(221298-221416)
chr7 (17-118)||(37354299-37354400)
chr7 (13-106)||(40520918-40521011)
chr7 (13-152)||(29248342-29248482)
chr7 (13-118)||(27774108-27774213)
chr7 (17-153)||(18353148-18353285)
chr7 (13-73)||(39034062-39034122)
chr7 (13-56)||(43025112-43025155)
chr7 (13-62)||(29739781-29739829)
chr7 (25-64)||(12583313-12583352)
chr7 (101-153)||(42888937-42888990)
chr7 (219-247)||(7335876-7335904)
chr7 (13-57)||(29739670-29739713)
[»] chr5 (44 HSPs)
chr5 (13-153)||(6739955-6740096)
chr5 (13-153)||(3352002-3352143)
chr5 (17-153)||(14717609-14717746)
chr5 (13-153)||(27457197-27457338)
chr5 (13-153)||(31710282-31710423)
chr5 (13-153)||(40074950-40075091)
chr5 (15-153)||(39002025-39002164)
chr5 (13-153)||(8215900-8216041)
chr5 (13-153)||(30297749-30297890)
chr5 (13-153)||(38964114-38964254)
chr5 (13-153)||(39824556-39824697)
chr5 (13-152)||(30863253-30863393)
chr5 (13-153)||(4015874-4016015)
chr5 (13-153)||(8689572-8689713)
chr5 (13-153)||(11000728-11000869)
chr5 (17-153)||(14952328-14952465)
chr5 (13-153)||(16095960-16096100)
chr5 (13-153)||(20079258-20079399)
chr5 (13-153)||(26593280-26593421)
chr5 (13-153)||(33760470-33760611)
chr5 (13-153)||(35342180-35342321)
chr5 (13-153)||(42993518-42993659)
chr5 (13-152)||(41282342-41282482)
chr5 (8-153)||(23128913-23129059)
chr5 (13-153)||(6251972-6252113)
chr5 (17-153)||(6600136-6600273)
chr5 (13-153)||(11692147-11692288)
chr5 (13-153)||(19659501-19659642)
chr5 (13-153)||(30208402-30208543)
chr5 (13-153)||(43166269-43166410)
chr5 (13-115)||(6331377-6331479)
chr5 (17-153)||(20408537-20408674)
chr5 (13-118)||(26035382-26035487)
chr5 (13-132)||(16752116-16752236)
chr5 (21-153)||(1052541-1052674)
chr5 (13-153)||(28078405-28078546)
chr5 (17-153)||(27116099-27116236)
chr5 (17-153)||(11935450-11935586)
chr5 (17-153)||(19398193-19398330)
chr5 (21-118)||(444962-445059)
chr5 (13-153)||(8694866-8695007)
chr5 (13-153)||(27509978-27510112)
chr5 (219-248)||(28078310-28078339)
chr5 (219-255)||(8215709-8215745)
[»] chr3 (55 HSPs)
chr3 (13-153)||(33151696-33151837)
chr3 (17-153)||(35346471-35346608)
chr3 (13-153)||(21564496-21564637)
chr3 (13-153)||(21656518-21656659)
chr3 (13-153)||(1017044-1017185)
chr3 (17-153)||(1687655-1687792)
chr3 (13-153)||(20813441-20813582)
chr3 (13-153)||(38446476-38446617)
chr3 (18-153)||(42016878-42017014)
chr3 (13-147)||(22851996-22852131)
chr3 (13-153)||(20760071-20760212)
chr3 (13-153)||(26455582-26455723)
chr3 (13-153)||(31122662-31122803)
chr3 (13-153)||(51562162-51562303)
chr3 (18-153)||(21890175-21890311)
chr3 (13-118)||(19268521-19268626)
chr3 (13-153)||(20086314-20086455)
chr3 (13-153)||(36314972-36315113)
chr3 (13-153)||(41250886-41251027)
chr3 (13-153)||(47329175-47329316)
chr3 (17-153)||(50287570-50287707)
chr3 (17-153)||(10618480-10618617)
chr3 (13-153)||(37247956-37248097)
chr3 (13-153)||(42107099-42107240)
chr3 (13-153)||(53196014-53196155)
chr3 (13-118)||(53926015-53926120)
chr3 (13-148)||(19664541-19664677)
chr3 (13-152)||(29677476-29677616)
chr3 (13-118)||(1448768-1448873)
chr3 (13-145)||(12748391-12748524)
chr3 (17-118)||(32650856-32650957)
chr3 (17-153)||(40922165-40922302)
chr3 (13-153)||(44798268-44798408)
chr3 (13-153)||(52821049-52821190)
chr3 (15-153)||(3697148-3697287)
chr3 (15-153)||(20913754-20913893)
chr3 (15-153)||(20921872-20922011)
chr3 (13-153)||(27070739-27070880)
chr3 (13-153)||(35608131-35608272)
chr3 (13-153)||(48651248-48651389)
chr3 (13-132)||(50364908-50365028)
chr3 (15-118)||(50977866-50977969)
chr3 (15-118)||(51080998-51081101)
chr3 (17-118)||(51475282-51475383)
chr3 (13-153)||(55164115-55164256)
chr3 (13-113)||(28699685-28699785)
chr3 (13-153)||(33473239-33473380)
chr3 (13-153)||(39069726-39069867)
chr3 (13-153)||(45380260-45380401)
chr3 (13-90)||(44152700-44152777)
chr3 (13-78)||(47473230-47473295)
chr3 (15-118)||(34019462-34019565)
chr3 (28-153)||(38923998-38924124)
chr3 (44-118)||(42641214-42641288)
chr3 (219-248)||(28775383-28775412)
[»] chr6 (29 HSPs)
chr6 (15-153)||(2390267-2390406)
chr6 (13-152)||(6503718-6503858)
chr6 (13-153)||(3408189-3408330)
chr6 (13-153)||(1915343-1915484)
chr6 (13-153)||(2707459-2707600)
chr6 (13-153)||(9382519-9382660)
chr6 (13-153)||(10256237-10256378)
chr6 (13-153)||(12626636-12626777)
chr6 (17-153)||(17428272-17428409)
chr6 (13-153)||(26230932-26231073)
chr6 (13-153)||(8178249-8178390)
chr6 (17-153)||(26393009-26393146)
chr6 (13-153)||(29050272-29050413)
chr6 (17-153)||(30379021-30379158)
chr6 (17-153)||(17943040-17943177)
chr6 (17-118)||(16193314-16193415)
chr6 (13-153)||(3258807-3258948)
chr6 (24-153)||(2598099-2598229)
chr6 (13-153)||(11133873-11134015)
chr6 (17-153)||(1077241-1077378)
chr6 (13-118)||(26936607-26936712)
chr6 (17-153)||(26196321-26196458)
chr6 (28-118)||(35223935-35224025)
chr6 (13-153)||(6785101-6785239)
chr6 (17-114)||(10931187-10931288)
chr6 (17-152)||(25820550-25820686)
chr6 (67-153)||(31375971-31376058)
chr6 (96-153)||(12612971-12613029)
chr6 (219-248)||(2390110-2390139)
[»] chr8 (41 HSPs)
chr8 (13-153)||(2533272-2533413)
chr8 (13-153)||(3875908-3876049)
chr8 (17-153)||(37933646-37933783)
chr8 (18-153)||(15847117-15847253)
chr8 (15-153)||(35884430-35884569)
chr8 (13-153)||(513308-513448)
chr8 (13-153)||(1293486-1293627)
chr8 (13-153)||(28707446-28707587)
chr8 (13-153)||(36400070-36400211)
chr8 (17-153)||(38107103-38107240)
chr8 (13-153)||(43806533-43806674)
chr8 (13-153)||(22683988-22684129)
chr8 (13-153)||(35443311-35443452)
chr8 (17-153)||(259982-260118)
chr8 (17-153)||(655803-655939)
chr8 (17-153)||(841538-841674)
chr8 (13-153)||(9056338-9056479)
chr8 (13-132)||(7434886-7435006)
chr8 (17-153)||(440844-440981)
chr8 (13-153)||(28496355-28496495)
chr8 (13-153)||(38633710-38633851)
chr8 (13-153)||(23972295-23972437)
chr8 (17-153)||(38208756-38208894)
chr8 (28-153)||(41536527-41536653)
chr8 (13-118)||(12010549-12010654)
chr8 (13-153)||(13797089-13797229)
chr8 (13-118)||(23935233-23935338)
chr8 (13-153)||(33651841-33651982)
chr8 (17-153)||(40301893-40302030)
chr8 (13-148)||(39513344-39513480)
chr8 (13-153)||(24430571-24430712)
chr8 (13-132)||(29485287-29485406)
chr8 (15-118)||(6016207-6016310)
chr8 (13-153)||(42988227-42988367)
chr8 (17-153)||(4649154-4649291)
chr8 (17-153)||(36218781-36218917)
chr8 (13-91)||(24193356-24193433)
chr8 (89-152)||(24193131-24193195)
chr8 (19-77)||(8137180-8137238)
chr8 (219-247)||(13797295-13797323)
chr8 (219-251)||(35443518-35443550)
[»] chr4 (54 HSPs)
chr4 (13-153)||(4544985-4545126)
chr4 (13-153)||(33807780-33807921)
chr4 (13-153)||(42273802-42273943)
chr4 (13-153)||(11795154-11795295)
chr4 (13-153)||(28264643-28264784)
chr4 (13-153)||(55517185-55517326)
chr4 (15-153)||(24458631-24458770)
chr4 (15-153)||(26017425-26017564)
chr4 (13-153)||(12196469-12196610)
chr4 (13-153)||(19496102-19496243)
chr4 (17-153)||(23135006-23135143)
chr4 (13-153)||(28159953-28160094)
chr4 (13-153)||(31591076-31591216)
chr4 (13-153)||(31973591-31973732)
chr4 (17-153)||(32317957-32318094)
chr4 (17-153)||(48551764-48551901)
chr4 (13-153)||(48707733-48707874)
chr4 (13-152)||(40988633-40988773)
chr4 (18-153)||(49118616-49118752)
chr4 (15-153)||(2055280-2055419)
chr4 (14-152)||(33174021-33174160)
chr4 (16-153)||(48149502-48149640)
chr4 (13-153)||(5227390-5227531)
chr4 (13-153)||(15985010-15985151)
chr4 (13-153)||(28812287-28812427)
chr4 (18-153)||(44490324-44490460)
chr4 (15-153)||(8882013-8882152)
chr4 (13-153)||(9339123-9339267)
chr4 (13-153)||(14564796-14564937)
chr4 (13-153)||(17847096-17847236)
chr4 (13-153)||(35930040-35930180)
chr4 (13-153)||(39995167-39995308)
chr4 (13-153)||(50542354-50542495)
chr4 (13-152)||(32118714-32118854)
chr4 (13-151)||(10588580-10588719)
chr4 (13-153)||(17993017-17993158)
chr4 (13-118)||(24623148-24623253)
chr4 (17-153)||(25734223-25734360)
chr4 (17-153)||(30467003-30467140)
chr4 (13-153)||(39700045-39700186)
chr4 (15-152)||(37381848-37381986)
chr4 (13-118)||(19168831-19168936)
chr4 (17-153)||(23553069-23553205)
chr4 (13-153)||(30141108-30141249)
chr4 (13-153)||(33693333-33693474)
chr4 (15-153)||(50276138-50276274)
chr4 (13-153)||(51371047-51371188)
chr4 (17-153)||(25730244-25730381)
chr4 (13-153)||(31208748-31208885)
chr4 (13-132)||(42549643-42549762)
chr4 (13-153)||(22298517-22298659)
chr4 (13-94)||(56555200-56555281)
chr4 (73-153)||(20534225-20534306)
chr4 (219-255)||(30141373-30141409)
[»] chr2 (45 HSPs)
chr2 (13-153)||(16246193-16246334)
chr2 (13-153)||(27328584-27328725)
chr2 (13-153)||(33865267-33865408)
chr2 (13-153)||(921022-921163)
chr2 (17-153)||(25087796-25087933)
chr2 (13-153)||(28650426-28650567)
chr2 (13-153)||(40854609-40854750)
chr2 (13-153)||(41500502-41500643)
chr2 (13-147)||(771981-772116)
chr2 (13-153)||(7378963-7379104)
chr2 (13-153)||(9276574-9276715)
chr2 (13-153)||(11949426-11949567)
chr2 (13-153)||(33106969-33107110)
chr2 (13-153)||(34253142-34253283)
chr2 (16-153)||(2056929-2057067)
chr2 (13-153)||(2456010-2456151)
chr2 (13-153)||(12759750-12759890)
chr2 (17-153)||(37838301-37838438)
chr2 (13-152)||(17134229-17134369)
chr2 (15-153)||(7297234-7297373)
chr2 (13-153)||(1106559-1106700)
chr2 (13-153)||(2094410-2094551)
chr2 (13-118)||(8396587-8396692)
chr2 (13-153)||(19180422-19180562)
chr2 (13-153)||(37732193-37732334)
chr2 (13-148)||(36211046-36211182)
chr2 (13-152)||(36444229-36444369)
chr2 (13-152)||(38751048-38751188)
chr2 (15-153)||(2314975-2315114)
chr2 (13-146)||(3430631-3430765)
chr2 (13-153)||(8899682-8899822)
chr2 (13-118)||(43249448-43249553)
chr2 (14-153)||(45124120-45124260)
chr2 (17-153)||(17484550-17484687)
chr2 (13-153)||(29737748-29737889)
chr2 (13-114)||(41178059-41178160)
chr2 (13-153)||(42629962-42630103)
chr2 (17-118)||(37654112-37654213)
chr2 (13-118)||(19916023-19916128)
chr2 (62-153)||(14630663-14630755)
chr2 (14-153)||(9331757-9331897)
chr2 (64-153)||(23671811-23671901)
chr2 (13-69)||(23672958-23673014)
chr2 (219-247)||(31214113-31214141)
chr2 (219-247)||(42630169-42630197)
[»] scaffold1986 (1 HSPs)
scaffold1986 (13-153)||(114-255)
[»] scaffold0004 (1 HSPs)
scaffold0004 (13-153)||(218885-219027)
[»] scaffold0693 (1 HSPs)
scaffold0693 (17-153)||(5027-5164)
[»] scaffold0096 (1 HSPs)
scaffold0096 (18-153)||(47967-48103)
[»] scaffold0005 (1 HSPs)
scaffold0005 (13-153)||(252438-252579)
[»] scaffold0727 (1 HSPs)
scaffold0727 (17-153)||(5190-5326)
[»] scaffold0542 (1 HSPs)
scaffold0542 (13-118)||(2009-2114)
[»] scaffold0122 (1 HSPs)
scaffold0122 (17-118)||(11362-11463)
[»] scaffold0184 (1 HSPs)
scaffold0184 (17-153)||(13099-13236)
[»] scaffold0078 (1 HSPs)
scaffold0078 (17-153)||(59608-59745)
[»] scaffold0392 (1 HSPs)
scaffold0392 (13-66)||(289-342)
[»] scaffold0130 (1 HSPs)
scaffold0130 (13-63)||(19781-19831)
[»] scaffold1562 (1 HSPs)
scaffold1562 (73-153)||(599-680)
[»] scaffold1158 (1 HSPs)
scaffold1158 (73-153)||(1913-1994)
[»] scaffold0952 (1 HSPs)
scaffold0952 (73-118)||(3407-3452)
[»] scaffold0717 (1 HSPs)
scaffold0717 (73-153)||(1877-1958)


Alignment Details
Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 12143072 - 12143213
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  12143072 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 12143171  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  12143172 accaactatgttatctacaataggacttgtttgaaacgattc 12143213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 7553157 - 7553016
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  7553157 agagcattatccaccatttgtcatggctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 7553058  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  7553057 accaactatgttatctacaatatgacttgtttgaaacgattc 7553016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 23767555 - 23767414
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23767555 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 23767456  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  23767455 accaactatgctatctacaatatgacttgtttgaaacgattc 23767414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 19315640 - 19315781
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  19315640 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaagcaatt 19315739  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  19315740 accaactatgctatctacaatatgacttgtttgaaacgattc 19315781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 38473767 - 38473626
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  38473767 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaatt 38473668  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  38473667 accaactatgatatctacaataggacttgtttgaaacgattc 38473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 41106016 - 41106157
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  41106016 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 41106115  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  41106116 accaactatgctatctacaataggacttgtttgaaacgattc 41106157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 46825531 - 46825672
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  46825531 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 46825630  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| ||||||| || ||||||||||||||||    
T  46825631 accaattatgctatctacaataggacttgtttgaaacgattc 46825672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 7651662 - 7651803
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  7651662 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaatt 7651761  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| ||| ||||||| || ||||||||||||||||    
T  7651762 atcaactatgctatctacaatatgacttgtttgaaacgattc 7651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28425504 - 28425363
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  28425504 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 28425405  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| | ||||| || ||||||||||||||||    
T  28425404 accaactatgctatctgcaataggacttgtttgaaacgattc 28425363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 49094848 - 49094711
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  49094848 cattatccaccatttgttatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 49094749  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  49094748 actatgctatctacaataggacttgtttgaaacgattc 49094711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 19274559 - 19274699
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  19274559 agagcattatccactatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaatt 19274658  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||| | ||||||| ||||||| || |||||||||||||||    
T  19274659 accagctatgttatctacaataggacttgtttgaaacgatt 19274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 36157818 - 36157678
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  36157818 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 36157719  T
Q  113 accaacatgttatatacaatacgatttgtttgaaacgattc 153  Q
     | |  ||| ||| ||||||| || ||||||||||||||||    
T  36157718 ccaattatgctatctacaataggacttgtttgaaacgattc 36157678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 25988410 - 25988271
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||||    
T  25988410 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaaccaattac 25988311  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| ||||||| || ||||||||||||||||    
T  25988310 caactatgctatctacaataggacttgtttgaaacgattc 25988271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 49814302 - 49814441
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  49814302 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattac 49814401  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| || |||| || || |||||||||||||    
T  49814402 caactatgctatctagaatatgacttatttgaaacgattc 49814441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 45350852 - 45350717
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  45350852 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagatcaaggaagcaattacca 45350753  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||||| |  ||||||||||||||||    
T  45350752 actatgttatctacaatagg--ttgtttgaaacgattc 45350717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 33325727 - 33325868
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||| ||||||||||||    
T  33325727 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtcttagaagccagatttgataccaaagatgagtttaaggaagcaatt 33325826  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  33325827 accaactatgttatctacaataggacttgtttgaaacgattc 33325868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 50689943 - 50690084
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  50689943 agagcattatccatcatttgctatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaatgaagcaatt 50690042  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  50690043 accaactatgttatctacaatatgacttgtttgaaacgattc 50690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 16705870 - 16706011
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||    
T  16705870 agagcattatccaccattttccatgcctaaaaagatgactaattttaagtgggttttaggcgccagatttggtaccaaagatgagttcaaggaagcaatt 16705969  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| || |||| || ||||||||||||||||    
T  16705970 accaactatgttatctaaaataagacttgtttgaaacgattc 16706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 26549388 - 26549529
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||    
T  26549388 agagcattatccaccatttatcatgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtatcaaagatgagttcaaggaagcaatt 26549487  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || |||||| |||||||||    
T  26549488 accaactatgctatctacaataggacttgtttaaaacgattc 26549529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 33674017 - 33674158
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  33674017 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtacgaaagatgagttcaaggaagcaatt 33674116  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| | ||| ||| ||||||| || |||||||| |||||||    
T  33674117 accagctatgctatctacaataggacttgtttgacacgattc 33674158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 46051450 - 46051591
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  46051450 agagcattatccaccatttgccatgcctaaaaagatgactagttttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaatt 46051549  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||| | || ||||||||||||||||    
T  46051550 accaactatgctatctacaacaggacttgtttgaaacgattc 46051591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 48802472 - 48802331
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||||||    
T  48802472 agagcattatccaccatttatcatgcctacaaagatgactaattttaagtaggtgttaggagccatatttgataccaaagatgagttcaatgaagcaatt 48802373  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  48802372 accaactatgctatctacaataagacttgtttgaaacgattc 48802331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 36781311 - 36781172
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  36781311 agcattatccaccatttgccatgcccaaaaagacgactaattttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaattac 36781212  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| ||||||| || ||||||||||||||||    
T  36781211 caactatgatatctacaataagacttgtttgaaacgattc 36781172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 9878921 - 9878784
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || | |||| ||||||||||||||||||||||||||||    
T  9878921 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaacccgatatggtactaaagatgagttcaaggaagcaattacca 9878822  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || || |||| ||||||| || ||||||||||||||||    
T  9878821 actattttatctacaatatgacttgtttgaaacgattc 9878784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 23228335 - 23228194
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| || |||| |||||||||||||||||||||||||||||    
T  23228335 agagcattatctaccatttgtcatgcctaaaaagatgactaattttaaatggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 23228236  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||||||  | ||||||||||||||||    
T  23228235 accaactatgctatctacaatagtacttgtttgaaacgattc 23228194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 26069896 - 26070033
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||| |||||||||||||| |||||||||    
T  26069896 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccggatttgataccaaaaatgagttcaaggaaacaattacca 26069995  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  26069996 actatgatatctacaatatgacttgtttgaaacgattc 26070033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 52146993 - 52147134
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||  |||||||||||||||||| |||||||||    
T  52146993 agagcattatccaccatttgtcatgcctaaaaagatgaataattttaagtgggtgttaggaaccagatttgataccaaagatgagttcaatgaagcaatt 52147092  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||||| | || ||||||||||||||||    
T  52147093 acaaactatgctatatacaacatgacttgtttgaaacgattc 52147134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 12964646 - 12964750
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  12964646 agagcattatacaacatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 12964745  T
Q  113 accaa 117  Q
    |||||    
T  12964746 accaa 12964750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 48319183 - 48319067
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  48319183 cattatccaccatttgtaatgcctaaaaagatgactgattttaagtgggtgttaggagccagatttagtaccaaagatgagttcaaggaagcaattacca 48319084  T
Q  117 ac-atgttatatacaat 132  Q
    || ||| ||||||||||    
T  48319083 actatgctatatacaat 48319067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 50533383 - 50533523
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||||||||    
T  50533383 agagcattatccaaaatttgacatgcctaaaaagatgactaattttaagtgggtgttaggagccagattcggtaccaaagatgagttcaatgaagcaatt 50533482  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||||||| || |||| || |||||||||||||||    
T  50533483 accaactatgttatctataataggacttgtttgaaacgatt 50533523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 45670623 - 45670486
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  || |||| |||||||||||||||||||||||||||||||||    
T  45670623 cattatccaccatttgtcatgcctaaaaagatgactaattttaagt-ggtgttaggaatcagatttggtaccaaagatgagttcaaggaagcaattacca 45670525  T
Q  117 a--catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |   ||||||| ||||||| || ||||||||||||||||    
T  45670524 aactatgttatctacaataggacttgtttgaaacgattc 45670486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 24204612 - 24204474
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||    
T  24204612 agagcattatccatcatttgccatgcctaaaaagatgactcattttaagtgggtattaggagccagatttggtaccaaagacgagttcaaggaagcaatt 24204513  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacga 150  Q
    |||||| ||| ||| ||||||| || |||||||||||||    
T  24204512 accaactatgctatctacaataggacttgtttgaaacga 24204474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 7608907 - 7608766
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| |||| |||||||||||||| |||||||||    
T  7608907 agagcattatccaccatttgtcatgcctaaaaacatgactaattttaagtgggtgttaggaggcagatttggtacaaaagatgagttcaaagaagcaatt 7608808  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| ||| || |||| || ||||||||||||||||    
T  7608807 atcaactatgctatctataataggacttgtttgaaacgattc 7608766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 9962755 - 9962892
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | | |||| |||||||||||||||||||||||||||||||||    
T  9962755 cattatccaccatttatcatgcctaaaaagatgactaattttaagtgggtgttaggaactagatttggtaccaaagatgagttcaaggaagcaattacca 9962854  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||| |  | ||||||||||||||||    
T  9962855 actatgctatctacaacagaacttgtttgaaacgattc 9962892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 18892329 - 18892470
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||| |||| ||| ||||||||||||||| |||||||||    
T  18892329 agagcattatccaccatttgtcattcctaaaaggatgactaattttcagtgggtgttagaagccagatttggtatcaaagatgagttcaaagaagcaatt 18892428  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  18892429 accaactatgctatctacaataggacttgtttgaaacgattc 18892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 43396675 - 43396816
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  43396675 agagcattatccatcatttgctatgcttaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 43396774  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||||  || ||| |||| || |||||||||||||||||||    
T  43396775 atcaactctgctatctacagtaggatttgtttgaaacgattc 43396816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 48669533 - 48669396
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||| ||||    
T  48669533 cattatccattatttgtcatgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatcacca 48669434  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  48669433 actatgctatctacaataggacttgtttgaaacgattc 48669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 52350065 - 52349924
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  ||  ||||||||||| ||||||||||||    
T  52350065 agagcattatccactatttgtcatgcctaaaaagatgactaattttaagtgggtgttaagagccaaatttgatagaaaagatgagtttaaggaagcaatt 52349966  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  52349965 accaactatgctatttacaataggacttgtttgaaacgattc 52349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 18917524 - 18917664
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | |||||||||||||||    
T  18917524 agagaattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcatatttggtaccaaagataaattcaaggaagcaatt 18917623  T
Q  113 a-ccaacatgttatatacaatacgatttgtttgaaacgatt 152  Q
    |   || ||| ||| ||||||| ||||||||||||||||||    
T  18917624 attaaatatgctatctacaatatgatttgtttgaaacgatt 18917664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 41982372 - 41982237
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || |||| ||||||||||||||||||| |||| ||||| ||    
T  41982372 cattatccaccatttgtcatgcctaaaaatatgactaattttaaatgggtgttaggagtcagatttggtaccaaagatgagttcaaagaagtaattatca 41982273  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgat 151  Q
    || ||||||| ||||||| || ||||||||||||||    
T  41982272 actatgttatctacaatatgacttgtttgaaacgat 41982237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 9974846 - 9974947
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  9974846 cattatccaccatttaccatgcctaaaaagatgactaattttaagtgggtgttacgagccatatttagtaccaaaaatgagttcaaggaagcaattacca 9974945  T
Q  117 ac 118  Q
    ||    
T  9974946 ac 9974947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 17984039 - 17983898
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  || |||| ||||||||||||||||||| |||||||||    
T  17984039 agagcattatctaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttatgaatcagatttggtaccaaagatgagttcaaagaagcaatt 17983940  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||||||| |||| || || ||| ||||||||||||    
T  17983939 acaaactatgttatttacattaggacttggttgaaacgattc 17983898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 37216900 - 37217037
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||| | | || ||||||||||||||||||||||| |||||||||    
T  37216900 cattatccaccatttgccatgtctaaaaagatgactaattttaagtgggtgttatgagctagagttggtaccaaagatgagttcaaggaaacaattacca 37216999  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  37217000 actatgctatctacaataggacttgtttgaaacgattc 37217037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 46095216 - 46095075
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| || ||||  || ||||||||||||||||||| |||||    
T  46095216 agagcattatccaccatttgtcatgtttaaaaagatgactaattttaagtggatgttaggagacagatttgatatcaaagatgagttcaaggaaacaatt 46095117  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  46095116 accaactatgctatctacaataggacttgtttgaaacgattc 46095075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 5400876 - 5401011
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| | ||| |||| ||||||||||||||||||||||||||||||||||    
T  5400876 attatccaccatttg-catgcctaaaaagatgactaattttaagtggatgttagaaaccagatttggtaccaaagatgagttcaaggaagcaattaccaa 5400974  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||| ||| ||||||| || |||||||||| |||||    
T  5400975 ctatgctatctacaataggacttgtttgaaaagattc 5401011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 6711440 - 6711581
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  ||||  |||||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  6711440 agagcattatccaccatttaccatgtgtaaaaagatggctaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagcaatt 6711539  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||  | | ||||||| || ||||||||||||||||    
T  6711540 accaactataatgtctacaatatgacttgtttgaaacgattc 6711581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 8141623 - 8141486
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || || |||| |||| |||||||||||||| ||||||||||| |    
T  8141623 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttacaagtcagatttggtactaaagatgagttcaaagaagcaattacaa 8141524  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  ||| ||| ||||||| || ||||||||||||||||    
T  8141523 attatgctatctacaataggacttgtttgaaacgattc 8141486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 21965069 - 21965206
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||| || |||||||||||||    
T  21965069 cattatacaccatttgccatgcctaaaaagatgactaattttaagtgggtgtaaggagtcagatttggtaccaaagatgagtttaatgaagcaattacca 21965168  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  |||| || ||||||| || ||||||||||||||||    
T  21965169 attatgtcatctacaataggacttgtttgaaacgattc 21965206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 33194792 - 33194687
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |    
T  33194792 agagcattaaccaccattcgccatgcctaaaaagatgactgattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaact 33194693  T
Q  113 accaac 118  Q
    ||||||    
T  33194692 accaac 33194687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 34971084 - 34971221
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || ||||  ||||||| |||||||||| ||| |||||||||    
T  34971084 cattatccaccatttgccatgcctaaaaagatgactaattttaagtgagtgttaggagtcagatttgataccaaatatgagttcaaagaaacaattacca 34971183  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| |||| || || ||||||||||||||||    
T  34971184 actatgttatctacattaggacttgtttgaaacgattc 34971221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 52067792 - 52067691
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || |||| ||||||| |||||||||||||||||||||    
T  52067792 agagcattatccaccatttgtcatccctaaaaagatgaataattttaagtgggtgttaggagtcagatttggtaccaacgatgagttcaaggaagcaatt 52067693  T
Q  113 ac 114  Q
    ||    
T  52067692 ac 52067691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 25800648 - 25800782
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaa----gatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||      ||| ||||||||    |||||||||||||||||||||    
T  25800648 cattatccaccatttatcatgcctaaaaagatgactaattttaagtgggtgttaaga------tttggtaccaaattaagatgagttcaaggaagcaatt 25800741  T
Q  113 accaacatgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  25800742 accaacatgttatctacaataagacttgtttgaaacgattc 25800782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 33714495 - 33714361
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| || |||| ||| ||||||||||||||||||| |||||| |||    
T  33714495 attatccaccatttgtcatgcctaaaaagatgactaa-tgtaagt-ggtgttaggagtcagatttggtatcaaagatgagttcaaggaaacaattatcaa 33714398  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||||||| ||||||| |||||||||||||||||||    
T  33714397 ctatgttatctacaataggatttgtttgaaacgattc 33714361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 18782226 - 18782089
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||||||||||||  ||||||||| ||    
T  18782226 cattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgctatgaaccagattttgtaccaaagatgagttcaaataagcaattatca 18782127  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| || |||| || |||||||||| |||||    
T  18782126 actatgctatctagaatatgacttgtttgaaatgattc 18782089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 40721342 - 40721484
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaag-tgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaat 111  Q
    |||||||||||||||||||||||||||||||||||| | |||||||| | ||||| |||||||||| |||| ||| |||||||||||||||| |||||||    
T  40721342 agagcattatccaccatttgtcatgcctaaaaagataattaattttaggttgggtattaggagccagatttggtatcaaagatgagttcaagaaagcaat 40721441  T
Q  112 taccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || |||| ||| ||| ||||||| || ||||| ||||||||||    
T  40721442 tatcaactatgctatctacaataggacttgttggaaacgattc 40721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 16506925 - 16506824
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| ||||| |||||||||| || |||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||||||||    
T  16506925 cattatccaccatttgccatgcttaaaaagatggctgattttaagtgggtgttaggagccagatttggtaccaaggttgagttcaaggaagcaattacca 16506826  T
Q  117 ac 118  Q
    ||    
T  16506825 ac 16506824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 30281631 - 30281736
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  ||||||||||||||| |||  | |||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  30281631 agagcattatccaccattttacatgcctaaaaagataactggtattaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 30281730  T
Q  113 accaac 118  Q
    ||||||    
T  30281731 accaac 30281736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21929526 - 21929667
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtacc-------aaagatgagttcaaggaagcaa 110  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||||| |||| |||||       ||||||||||||||||||||||    
T  21929526 attatccaccatttgccat--ctaaaaagatgactaattttaagtgggttttaggagccagatttggtaccaaagatgaaagatgagttcaaggaagcaa 21929623  T
Q  111 ttaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||||| ||| ||| |||||||  | ||||||||||||||||    
T  21929624 ttaccaactatgctatctacaatagaacttgtttgaaacgattc 21929667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 50099220 - 50099298
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaa 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || ||||||| ||||||||    
T  50099220 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatgttaaaagtcatatttggtaccaaa 50099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 44979329 - 44979281
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaag 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44979329 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaag 44979281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 32373694 - 32373650
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32373694 agagcattatccaccatttgtcatgcctaaaaagatgactaattt 32373650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 44978868 - 44978768
Alignment:
Q  53 aattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa-catgttatatacaatacgatttgtttgaaacgat 151  Q
    |||||||||||| | |||||||||| |||| ||||||||||| |||||||||||||||||| |||  ||| ||| |||| |  || ||||||||||||||    
T  44978868 aattttaagtgg-tattaggagccagatttggtaccaaagataagttcaaggaagcaattatcaattatgctatctacattctgacttgtttgaaacgat 44978770  T
Q  152 tc 153  Q
    ||    
T  44978769 tc 44978768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 17989906 - 17989864
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattt 57  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  17989906 agcattattcactatttgtcatgcctaaaaagatgactaattt 17989864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 49973942 - 49973972
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaa 43  Q
    |||||||||||||||||||||||||||||||    
T  49973942 agagcattatccaccatttgtcatgcctaaa 49973972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 36781106 - 36781077
Alignment:
Q  219 cttaaaagacctttagatgcatttgaccta 248  Q
    ||||||||||||||||||||||||||||||    
T  36781106 cttaaaagacctttagatgcatttgaccta 36781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 35600263 - 35600122
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35600263 agagcattatccaccatttgtcatgcctaaaaagataactaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaatt 35600164  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  35600163 accaactatgctatctacaatatgacttgtttgaaacgattc 35600122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 47281265 - 47281124
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  47281265 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 47281166  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  47281165 accaactatggtatctacaataggacttgtttgaaacgattc 47281124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 47294432 - 47294291
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47294432 agagcattatccaccatttgtcatgcctaaaaagatgactaattataagtgggtgttaggagccagattttgtaccaaagatgagttcaaggaagcaatt 47294333  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  47294332 accaacgatgctatctacaataggacttgtttgaaacgattc 47294291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 44544409 - 44544549
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44544409 agagcattatccaccatttatcatgcctaaaaagatgactaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaatt 44544508  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| ||||||| || |||||||||||||||    
T  44544509 accaactatgctatctacaataggacttgtttgaaacgatt 44544549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 1469634 - 1469493
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  1469634 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaacaaagatgagttcaaggaagcaatt 1469535  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  1469534 accaactatgctatctacaataggacttgtttgaaacgattc 1469493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 27364480 - 27364339
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  27364480 agagcattatccaccatttgtcatacctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagtaatt 27364381  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| ||| |||||||||||||||    
T  27364380 accaactatgttatctacaataggatctgtttgaaacgattc 27364339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 47271981 - 47272122
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  47271981 agagcattatccatcatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagattcggtaccaaagatgagttcaaggaagcaatt 47272080  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  47272081 accaactatgttatctacaataggacttgtttgaaacgattc 47272122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 47219145 - 47219285
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  47219145 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatgttaggagccagatttagtaccaaagatgagttcaaggaagcaatt 47219244  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| ||||||| || |||||||||||||||    
T  47219245 accaactatgctatctacaataggacttgtttgaaacgatt 47219285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 30798509 - 30798368
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  30798509 agagcattatccatcatttgcaatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 30798410  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| |||||||||||||||||||    
T  30798409 accaactatgctatctacaataggatttgtttgaaacgattc 30798368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 31684275 - 31684134
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  31684275 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaatt 31684176  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||  ||| ||||||| || ||||||||||||||||    
T  31684175 accaactattctatctacaataggacttgtttgaaacgattc 31684134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 38427704 - 38427563
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  38427704 agagcattatccgccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaatt 38427605  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| || |||| || ||||||||||||||||    
T  38427604 accaactatgctatctataataggacttgtttgaaacgattc 38427563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 48628805 - 48628946
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || | ||| ||||||||||||||||||||    
T  48628805 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtgggtgttaggagccaaatttggtgcaaaaaatgagttcaaggaagcaatt 48628904  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  48628905 accaactatgttatctacaataggacttgtttgaaacgattc 48628946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 33884323 - 33884459
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  33884323 cattatccaccatttgtcatgcctaaaaagatggctaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattacca 33884422  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    || ||| ||| ||||||| || |||||||||||||||    
T  33884423 actatgctatctacaatatgacttgtttgaaacgatt 33884459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 8162853 - 8162712
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||||||||||||||||||||    
T  8162853 agagcattatccacaatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataacaaagatgagttcaaggaagcaatt 8162754  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  8162753 accaactatgctatctacaataggacttgtttgaaacaattc 8162712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 11476697 - 11476556
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  11476697 agagcattacccaccattcgccatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 11476598  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  11476597 accaactatgctatctacaataggacttgtttgaaacgattc 11476556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 23842305 - 23842446
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  23842305 agagcattatccaccatctgccatgcctaaaaagatgactaatttgaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaatt 23842404  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  23842405 accaactatgctatctacaataggacttgtttgaaacgattc 23842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 30876259 - 30876400
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||| |||||||||    
T  30876259 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagcccaatttggtaccaaaaatgagttcaatgaagcaatt 30876358  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||||||  | ||||||||||||||||    
T  30876359 accaactatgctatctacaatagcacttgtttgaaacgattc 30876400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 37394135 - 37393998
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||||||| |||||    
T  37394135 cattatccaccatttgtcatgcctaaaaagatgactaattttaactgggtgttaggagtcaaatttggtaccaaagatgagttcaaggaagcaactacca 37394036  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  37394035 actatgctatctacaataggacttgtttgaaacgattc 37393998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 40851274 - 40851415
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  40851274 agagcattatccaccatttgtcgtgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagattagttcaaggaagcaatt 40851373  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||  ||  ||||||| || ||||||||||||||||    
T  40851374 accaactattctacctacaataggacttgtttgaaacgattc 40851415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 41139553 - 41139408
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  41139553 agagcattattcaccatttgtcatgcctaaaaagatgactaattttaagcgggtgttaggagccagatttagtaccaaagatgagttcaaggaagcaatt 41139454  T
Q  113 accaac-----atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||     ||| ||| ||||||| || ||||||||||||||||    
T  41139453 accaactatatatgctatttacaataggacttgtttgaaacgattc 41139408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 45723632 - 45723491
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| || |||||    
T  45723632 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaagaaaacaatt 45723533  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||  ||| ||| ||||||| |||||||||||||||||||    
T  45723532 actaattatgctatctacaatatgatttgtttgaaacgattc 45723491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 43752917 - 43752776
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||||    
T  43752917 agagcattatccaccatttgtcctgcctcaaaagatgactaattttaagtggatgttaggagtcagatttagtaccaaagatgagttcaaggaagcaatt 43752818  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| ||||||| || ||||||||||||||||    
T  43752817 accaattatgctatctacaataggacttgtttgaaacgattc 43752776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 2960768 - 2960640
Alignment:
Q  26 ccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgtta 124  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||| ||    
T  2960768 ccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattaccaactatgcta 2960669  T
Q  125 tatacaatacgatttgtttgaaacgattc 153  Q
    | ||||||| || ||||||||||||||||    
T  2960668 tctacaataggacttgtttgaaacgattc 2960640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 30972082 - 30971941
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||||| ||||    
T  30972082 agagcattatccacaatttgtcatgcttaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgggtttaaggaagtaatt 30971983  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| |||  || ||||||| || ||||||||||||||||    
T  30971982 accaactatgccatctacaatatgacttgtttgaaacgattc 30971941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 41113377 - 41113518
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  41113377 agagcattattcatcatttgccatgtctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaatatgagttcaaggaagcaatt 41113476  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || |||||||||| |||||    
T  41113477 accaactatgctatctacaataggacttgtttgaaatgattc 41113518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 42979479 - 42979338
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||  || ||||||||||||||| |||||||||    
T  42979479 agagcattatccactatttgtcatgcctaaaaagatgactaattttaagtggatgttaggagtcagatttgatatcaaagatgagttcaacgaagcaatt 42979380  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||| || || ||||||||||||||||    
T  42979379 accaactatgttatctacagtaggacttgtttgaaacgattc 42979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 43968400 - 43968259
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||  || |||||||||||||||||||||||||    
T  43968400 agagcattatccaccatttgtcatgcctataaagatgactaattttaagtgggtattatgagccaaatttgatatcaaagatgagttcaaggaagcaatt 43968301  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| | | ||| ||||||| || ||||||||||||||||    
T  43968300 accaactacgctatctacaataggacttgtttgaaacgattc 43968259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 44800547 - 44800410
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||||    
T  44800547 cattatccaccatatatcatgcctaaaaagatgactaattttaagtgggtgttaggaaccatatttggtaccaaagatgagttcaatgaaacaattacca 44800448  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||| | || ||||||||||| ||||    
T  44800447 actatgttatctacaacaggacttgtttgaaacaattc 44800410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 47119991 - 47120134
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  47119991 agagcattatccaccatttatcatgcctaaaaagataactaattttaagtgggtgttaggagtcatatttggtaccaaatatgagttcaagaaagcaatt 47120090  T
Q  113 accaac---atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||   ||| | | ||||||| || ||||||||||||||||    
T  47120091 accaactatatgctctctacaataggacttgtttgaaacgattc 47120134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 4923220 - 4923352
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  4923220 cattatccaccatttgccatgcctaaaaagatgactaattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagtaattacca 4923319  T
Q  117 ac-atgttatatacaatacgatttgtttgaaac 148  Q
    || ||| |||  |||||| || |||||||||||    
T  4923320 actatgctatccacaataggacttgtttgaaac 4923352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 3797664 - 3797559
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  3797664 agagcattatccaccatttaacatgcctaaaaagatgactgattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 3797565  T
Q  113 accaac 118  Q
    | ||||    
T  3797564 atcaac 3797559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 11050398 - 11050261
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacc- 115  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| || |||| ||||||||||||| ||||||||||||||||||     
T  11050398 cattatccaccatttaccatgcctaaaaagatgactaattttaagtgggtattaggaggcagatttggtaccaaagatgaattcaaggaagcaattacca 11050299  T
Q  116 aacatgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  11050298 aatatgctatctacaataggacttgtttgaaacgattc 11050261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 47579228 - 47579131
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaa 110  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47579228 agagcattatccaccatttgtcattcctaaaaagatggttaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaa 47579131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 7336065 - 7336200
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||| |||    
T  7336065 attattcaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaatgatgagttcaaggaagcaattatcaa 7336164  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||| ||| ||||||| ||  |||||||||||||||    
T  7336165 ctatgctatctacaata-gaactgtttgaaacgattc 7336200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 221298 - 221416
Alignment:
Q  36 tgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttatatacaatac 134  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||| ||| |||||||     
T  221298 tgcctaaaaagaagactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattaccaactatgctatctacaatag 221397  T
Q  135 gatttgtttgaaacgattc 153  Q
    || ||||||||||||||||    
T  221398 gacttgtttgaaacgattc 221416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 37354400 - 37354299
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||    
T  37354400 cattatccaccatttgccatgcctaaaaagatgactgattttaagtgggtgttaggagccaaatttgataccaaagatgagttcaatgaagcaattacca 37354301  T
Q  117 ac 118  Q
    ||    
T  37354300 ac 37354299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 40520918 - 40521011
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaa 106  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40520918 agagcattatccaccatttgccatggctaaaaagatgactgattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaa 40521011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 29248342 - 29248482
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||  | |||||||||||||||||||| |||||    
T  29248342 agagaattatccacaatttgccatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttgatgccaaagatgagttcaaggaatcaatt 29248441  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| ||||||| || |||||||||| ||||    
T  29248442 accaactatgctatctacaataagacttgtttgaaatgatt 29248482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 27774108 - 27774213
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||| |||||||||| |||| ||||||| | |||||||||||||||||||    
T  27774108 agagcattatccaccatttgccatgcctaaaaagatggctgattttaagtgggttttaggagccagatttggtaccaaggttgagttcaaggaagcaatt 27774207  T
Q  113 accaac 118  Q
    ||||||    
T  27774208 accaac 27774213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 18353148 - 18353285
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||| || |||| ||| |||||||||||||||| || |||||||||    
T  18353148 cattatccaccatttatcatgtctaaaaagatgactaattttaattaggtgttaggagtcagatttggtatcaaagatgagttcaagaaaacaattacca 18353247  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| |||  || || ||||||||||||||||    
T  18353248 actatgctatctaccttaggacttgtttgaaacgattc 18353285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 39034062 - 39034122
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttagga 73  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  39034062 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtgggcgttagga 39034122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 43025112 - 43025155
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaatt 56  Q
    |||||| |||||| ||||||||||||||||||||||||||||||    
T  43025112 agagcaatatccatcatttgtcatgcctaaaaagatgactaatt 43025155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 29739781 - 29739829
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagt 62  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  29739781 agagcattatccaccatttaccatgcct-aaaagatgactaattttaagt 29739829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12583313 - 12583352
Alignment:
Q  25 accatttgtcatgcctaaaaagatgactaattttaagtgg 64  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  12583313 accatttttcatgcgtaaaaagatgactaattttaagtgg 12583352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 42888937 - 42888990
Alignment:
Q  101 aaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||||||||||||||| ||| ||| ||||||| || ||||||||||||||||    
T  42888937 aaggaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 42888990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 247
Target Start/End: Complemental strand, 7335904 - 7335876
Alignment:
Q  219 cttaaaagacctttagatgcatttgacct 247  Q
    |||||||||||||||||||||||||||||    
T  7335904 cttaaaagacctttagatgcatttgacct 7335876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 29739670 - 29739713
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattt 57  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||    
T  29739670 agagcattatccaccatttaccatgcct-aaaagatgactaattt 29739713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 6740096 - 6739955
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  6740096 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaagcaatt 6739997  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  6739996 accaactatgttatctacaataggacttgtttgaaacgattc 6739955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 3352143 - 3352002
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  3352143 agagcattatccaccctttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaatatgagttcaaggaagcaatt 3352044  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  3352043 accaactatgttatctacaataggacttgtttgaaacgattc 3352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 14717609 - 14717746
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  14717609 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 14717708  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  14717709 actatgctatctacaataggacttgtttgaaacgattc 14717746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 27457338 - 27457197
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  27457338 agagcattatccaccatttgccatgcctaaaaagatgactaatttaaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 27457239  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  27457238 accaactatgttatctacaatatgacttgtttgaaacgattc 27457197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 31710282 - 31710423
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  31710282 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 31710381  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||| || || ||||||||||||||||    
T  31710382 accaactatgttatctacattatgacttgtttgaaacgattc 31710423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 40074950 - 40075091
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  40074950 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttagtaccaaagatgagttcaatgaagcaatt 40075049  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||| ||||    
T  40075050 accaactatgttatctacaataggacttgtttgaaacaattc 40075091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 39002164 - 39002025
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  39002164 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattac 39002065  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| ||||||| || ||||||||||| ||||    
T  39002064 caactatgctatctacaatatgacttgtttgaaacaattc 39002025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 8215900 - 8216041
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  8215900 agagcattatccaccatttgtcattcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaatt 8215999  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  8216000 accaactatgctatctacaataggacttgtttgaaacgattc 8216041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 30297890 - 30297749
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| ||||||||||||    
T  30297890 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgctaggagccagatttggtaccaaagatgagttgaaggaagcaatt 30297791  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  30297790 accaactatgctatctacaataggacttgtttgaaacgattc 30297749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 38964254 - 38964114
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  38964254 agagcattatccaccatttgtcatgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 38964156  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  38964155 accaactatgctatctacaatatgacttgtttgaaacgattc 38964114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 39824556 - 39824697
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| |||||||||||||||||    
T  39824556 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagataagttcaaggaagcaatt 39824655  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| |||| || ||||||| || ||||||||||||||||    
T  39824656 accaactatgtcatctacaataggacttgtttgaaacgattc 39824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 30863253 - 30863393
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  30863253 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaagaagcaatt 30863352  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| |||| || || |||||||||||||||    
T  30863353 accaactatgctatctacattatgacttgtttgaaacgatt 30863393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 4016015 - 4015874
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4016015 agagcattatccaccatttatcatgcctaaaaatatgactaattttaagtaggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 4015916  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||| ||||||||||||    
T  4015915 accaactatgttatctacaataggacttgcttgaaacgattc 4015874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 8689572 - 8689713
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  8689572 agagcattatccactatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaatcaatt 8689671  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||| || || ||||||||||||||||    
T  8689672 accaactatgttatctacattatgacttgtttgaaacgattc 8689713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 11000869 - 11000728
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  11000869 agagcattatccaccacttgccaggcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 11000770  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  11000769 accaactatgctatctacaataggacttgtttgaaacgattc 11000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 14952328 - 14952465
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||    
T  14952328 cattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaattacca 14952427  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||| | || ||||||||||||||||    
T  14952428 actatgttatctacaacaagacttgtttgaaacgattc 14952465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 16096100 - 16095960
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  16096100 agagcattatccaccatttgtcatacctaaaaagatgactaattttaagtgggtgttaggagccagatttggtacc-aagatgagttcaaggaagcaatt 16096002  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  16096001 accaactatgctatctacaataggacttgtttgaaacgattc 16095960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 20079399 - 20079258
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||||||||||||||||    
T  20079399 agagcattatccacaatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtactaaagatgagttcaaggaagcaatt 20079300  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||| || || ||||||||||||||||    
T  20079299 accaactatgttatctacattaggacttgtttgaaacgattc 20079258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 26593421 - 26593280
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||    
T  26593421 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtaccaaagataagttcaaagaagcaatt 26593322  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  26593321 accaactatgctatctacaatatgacttgtttgaaacgattc 26593280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 33760611 - 33760470
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| ||||    
T  33760611 agagcattatccaccatttgtcatgactaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaagaagtaatt 33760512  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  33760511 accaactatgctatctacaataggacttgtttgaaacgattc 33760470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 35342180 - 35342321
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  35342180 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaatt 35342279  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| ||| ||||||  || ||||||||||||||||    
T  35342280 atcaactatgctatctacaatgagacttgtttgaaacgattc 35342321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 42993518 - 42993659
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  42993518 agagcattatccaccatttaccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaatt 42993617  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  42993618 accaactatgctatctacaataggaattgtttgaaacaattc 42993659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 41282342 - 41282482
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  41282342 agagcattatccaccatttatcatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 41282441  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| ||||||| || |||||||||| ||||    
T  41282442 accaactatgctatctacaataggacttgtttgaaatgatt 41282482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 23129059 - 23128913
Alignment:
Q  8 agcagagagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaag 107  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  23129059 agcaaagagcattatccaccatttatcatgcctaaaaagatgactaattttaagtggttgttaggagccagatttggtaccaaagatgagttcaaggaag 23128960  T
Q  108 caattaccaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||||||  ||| ||| ||| ||| || ||||||||||||||||    
T  23128959 caattaccaattatgctatctacgatatgacttgtttgaaacgattc 23128913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 6251972 - 6252113
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||||||| ||||||||||||||||||||    
T  6251972 agagcattattcaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttagaaggcagatttggtaccaaaaatgagttcaaggaagcaatt 6252071  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  6252072 accaactatgctatctacaataggacttgtttgaaacgattc 6252113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 6600273 - 6600136
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  6600273 cattatccaccatttaccatgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagcaattacca 6600174  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  6600173 actatgctatctacaataggacttgtttgaaacgattc 6600136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 11692288 - 11692147
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||||||||||||||||||    
T  11692288 agagcattatccaccatttgtgatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtatcaaagatgagttcaaggaagcaatt 11692189  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| | ||||| || ||||||||||||||||    
T  11692188 accaactatgctatctgcaatatgacttgtttgaaacgattc 11692147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 19659642 - 19659501
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||  ||||||||    
T  19659642 agagcattatccacaatttgtcatgcctaaaaagatgactaattttaagtgggtattaggagccagatttggtaccaaagatgagttcaaaaaagcaatt 19659543  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || || |||||||||||||    
T  19659542 accaactatgctatctacaataggacttatttgaaacgattc 19659501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 30208543 - 30208402
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  30208543 agagcattatccaccatttatcatgcctaaaaagatgattaattttaagtaggtgttaggagccaaatttggtatcaaagatgagttcaaggaagcaatt 30208444  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||||||  | |||||||||| |||||    
T  30208443 accaactatgttatctacaatagaacttgtttgaaatgattc 30208402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 43166410 - 43166269
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||| ||||||||    
T  43166410 agagcattatccatcatttgtcatgcctaaaaagatgactaattttaagtgggtgttatgagtcagatttggtaccaaagatgagttcaagaaagcaatt 43166311  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  43166310 accaactatgctatctacaataggacttgtttgaaacaattc 43166269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 6331377 - 6331479
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  6331377 agagcattattcaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 6331476  T
Q  113 acc 115  Q
    |||    
T  6331477 acc 6331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 20408537 - 20408674
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||| |||||||| |||||||||| |||||||||||||    
T  20408537 cattatccaccatttgccatgcctaaaaagatgactaattttaagcgggtgttaggagctagatttggtaccaaatatgagttcaatgaagcaattacca 20408636  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  20408637 actatgctatctacaataggacttgtttgaaacgattc 20408674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 26035487 - 26035382
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||    
T  26035487 agagcattatccaccatttgtcgtgcctaaaaagatgactgattttaagtgggtattaggagccatatttggtaccaaagatgagttcaagaaagcaatt 26035388  T
Q  113 accaac 118  Q
    ||||||    
T  26035387 accaac 26035382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 16752116 - 16752236
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||    
T  16752116 agagcattattcaccatttgtcatgcctaaaaagatgactgattttaagtggatgttaggatccagatttggtaccaaagatgagttcaaggaagcaatt 16752215  T
Q  113 accaac-atgttatatacaat 132  Q
    |||||| ||||||| ||||||    
T  16752216 accaactatgttatctacaat 16752236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 1052541 - 1052674
Alignment:
Q  21 atccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-a 119  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |    
T  1052541 atccaccatttgccatgcttaaaaagatgagtaattttaagtgggtgttaggagccagatttggtaccaaggatgagttcaaggaagcaattaccaacta 1052640  T
Q  120 tgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||||||| || ||||||||||| ||||    
T  1052641 tgctatctacaataggacttgtttgaaacaattc 1052674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28078546 - 28078405
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||| ||||||||||||||||||  || | |||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  28078546 agagcattatctaccatttgtcatgcctaattagtttactaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaatt 28078447  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||| || || ||||||||||||||||    
T  28078446 accaactatgctatctacattaggacttgtttgaaacgattc 28078405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 27116236 - 27116099
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  27116236 cattatccacgatttgtaatgcctaaaaagatgactaatttgaagtggatgttaggagccagatttggtaccaaatatgagttcaaggaagcaattacca 27116137  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || |||||| ||| |||||    
T  27116136 actatgctatctacaataggacttgtttaaaatgattc 27116099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 11935450 - 11935586
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||||||| |||| ||  |||||||||| |||||||| |||||||||    
T  11935450 cattatccactatttgttatgcctaaaaagatggctaattttaagtgagtgttaggagccacatttggt-tcaaagatgagatcaaggaaacaattacca 11935548  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||||| || ||||||||||||||||    
T  11935549 actatgttatctacaataggacttgtttgaaacgattc 11935586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 19398330 - 19398193
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  || | |||| ||||||||||||||||||| ||| |||||||||    
T  19398330 cattatccaccatttgtcatacctaaaaagatgactaattttaagtgggtgttagaggctagatttggtaccaaagatgagttcaaagaaacaattacca 19398231  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| |||||||  | |||||||||| |||||    
T  19398230 actatgctatctacaatagaacttgtttgaaatgattc 19398193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 444962 - 445059
Alignment:
Q  21 atccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac 118  Q
    |||||||||||| || ||||||||||| |||| ||||||||||||| ||||||| |||||||  ||||||||||||||||||| ||||||||||||||    
T  444962 atccaccatttgccacgcctaaaaagacgactgattttaagtgggttttaggagtcatatttgataccaaagatgagttcaagaaagcaattaccaac 445059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 8694866 - 8695007
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||| || ||| |||||| |||| |||| |||||||||||||| |||  ||||    
T  8694866 agagcattatccaccatttatcatgcctaagaacatgactaattttaagtgagtattatgagccagatttggtactaaagatgagttcaatgaaataatt 8694965  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||  ||| ||| ||||||| || ||||||||||| ||||    
T  8694966 atcaattatgctatctacaataggacttgtttgaaacaattc 8695007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 27509978 - 27510112
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||      | ||| ||||||||||||||||||| |||||||||    
T  27509978 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagt-ccttttag------tttttggtaccaaagatgagttcaaagaagcaatt 27510070  T
Q  113 accaac-atg-ttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| |||| ||||||| || ||||||||||||||||    
T  27510071 accaactatgcttat-tacaataggacttgtttgaaacgattc 27510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 28078339 - 28078310
Alignment:
Q  219 cttaaaagacctttagatgcatttgaccta 248  Q
    ||||||||||||||||||||||||||||||    
T  28078339 cttaaaagacctttagatgcatttgaccta 28078310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 8215745 - 8215709
Alignment:
Q  219 cttaaaagacctttagatgcatttgacctattcttaa 255  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  8215745 cttaaaggacctttagatgcatttgacctatttttaa 8215709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 33151696 - 33151837
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  33151696 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagattagttcaaggaagcaatt 33151795  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  33151796 accaactatgttatctacaataggacttgtttgaaacgattc 33151837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 35346608 - 35346471
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35346608 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagattttgtaccaaagatgagttcaaggaagcaattacca 35346509  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  35346508 actatgctatctacaatatgacttgtttgaaacgattc 35346471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 21564496 - 21564637
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21564496 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccatatttgataccaaagatgagttcaaggaagcaatt 21564595  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  21564596 accaactatgctatctacaataggacttgtttgaaacgattc 21564637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 21656518 - 21656659
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  21656518 agagcattatccaccatttatcatgcctaaaaaggtgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 21656617  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||||||||||| || ||||||||||||||||    
T  21656618 accaactatgctatatacaataggacttgtttgaaacgattc 21656659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 1017044 - 1017185
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||||||||||||    
T  1017044 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttatgagacagatttggtaccaaagatgagttcaaggaagcaatt 1017143  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  1017144 accaactatgctatctacaataggacttgtttgaaacgattc 1017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 1687655 - 1687792
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  1687655 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaattacca 1687754  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  1687755 actatgctatctacaataggacttgtttgaaacgattc 1687792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 20813582 - 20813441
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  20813582 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 20813483  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| |||| || || ||||||||||||||||    
T  20813482 accaattatgctatctacattatgacttgtttgaaacgattc 20813441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 38446476 - 38446617
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  38446476 agagcattatctactatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 38446575  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  38446576 accaactatgctatctacaatatgacttgtttgaaacgattc 38446617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 42016878 - 42017014
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  42016878 attatccatcatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaattaccaa 42016977  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||||||| ||||||| || ||||||||||||||||    
T  42016978 ctatgttatctacaatatgacttgtttgaaacgattc 42017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 22851996 - 22852131
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22851996 agagcattatccaccatttgtcatgcctaaacagatgactaattttaagtgggtgttaggagccatatttagtaccaaagatgagttcaaggaagcaatt 22852095  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaa 147  Q
    |||||| ||| ||| ||||||| || || |||||||    
T  22852096 accaactatgctatctacaataggacttatttgaaa 22852131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 20760212 - 20760071
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||||    
T  20760212 agagtattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 20760113  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  20760112 accaactatgctatctacaatatgacttgtttgaaacgattc 20760071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 26455582 - 26455723
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  26455582 agagcgttatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaaccaaatttggtaccaaagatgagttcaaggaagcaatt 26455681  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||| | || ||||||||||||||||    
T  26455682 accaactatgctatctacaacatgacttgtttgaaacgattc 26455723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 31122662 - 31122803
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  31122662 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagcgggtcttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 31122761  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  31122762 accaactatgctatctacaataagacttgtttgaaacgattc 31122803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 51562162 - 51562303
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  51562162 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaaacaatt 51562261  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||| ||  | ||||||||||||||||    
T  51562262 accaactatgttatctacattagaacttgtttgaaacgattc 51562303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21890175 - 21890311
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacc-a 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |    
T  21890175 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagctagatttggtaccaaagatgagttcaaggaagcaattaccaa 21890274  T
Q  117 acatgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||||||| || |||| || ||||||||||||||||    
T  21890275 atatgttatctataataggacttgtttgaaacgattc 21890311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 19268521 - 19268626
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  19268521 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaatt 19268620  T
Q  113 accaac 118  Q
    ||||||    
T  19268621 accaac 19268626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 20086455 - 20086314
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  20086455 agagcattatccaccattttccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 20086356  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| || |||| || ||||||||||||||||    
T  20086355 accaagtatgctatctataataggacttgtttgaaacgattc 20086314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 36315113 - 36314972
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  ||| ||||||||||||||||||||||||    
T  36315113 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaagagccagatttgatactaaagatgagttcaaggaagcaatt 36315014  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  36315013 accaactatgctatctacaataggacttgtttgaaacaattc 36314972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 41250886 - 41251027
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  41250886 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaaacaatt 41250985  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  41250986 accaactatgctatctacaataagacttgtttgaaacaattc 41251027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 47329316 - 47329175
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  47329316 agagcattatccaccatttgccatacctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 47329217  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||| ||| || ||||| ||||||||||    
T  47329216 accaactatgctatctacgatatgacttgttggaaacgattc 47329175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 50287570 - 50287707
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| || |||||||||||||    
T  50287570 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaatatgagtttaatgaagcaattacca 50287669  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  50287670 actatgctatctacaataggacttgtttgaaacgattc 50287707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 10618617 - 10618480
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||||||| |||||||||||||    
T  10618617 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttgataccaaagatgagttcaatgaagcaattacca 10618518  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  |||| || ||||||| || ||||||||||||||||    
T  10618517 attatgtcatctacaataggacttgtttgaaacgattc 10618480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 37247956 - 37248097
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  37247956 agagcattattcatcatttgtcatgcatgaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaatt 37248055  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  37248056 accaactatgttatctacaataggacttgtttgaaacgattc 37248097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 42107240 - 42107099
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||| ||||    
T  42107240 agagcattatccaccatttgacatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtgtcaaagatgagttcaaggaagtaatt 42107141  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||  ||| ||||||| || ||||||||||||||||    
T  42107140 accaactatactatctacaataggacttgtttgaaacgattc 42107099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 53196014 - 53196155
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||||||||  ||||    
T  53196014 agagcattatccaccatttgccatgcctaaaaagataactaattttaagtgggtgttaggagcgagatttggtaccaaagatgagttcaaggaaataatt 53196113  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || || |||||||||||||    
T  53196114 accaactatgttatctacaataagacttctttgaaacgattc 53196155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 53926120 - 53926015
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  53926120 agagcattatccaccatttgtcatgcttaaaaagatgactaattttaagtgggtgttaggagtcatatttggtaccaaagatgagttcaatgaagcaatt 53926021  T
Q  113 accaac 118  Q
    ||||||    
T  53926020 accaac 53926015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 19664541 - 19664677
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||| ||| |||||||||||||||||||||||||    
T  19664541 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatgttatgagtcagatttggtatcaaagatgagttcaaggaagcaatt 19664640  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaac 148  Q
    |||||| ||| ||| ||||||| || |||||||||||    
T  19664641 accaactatgctatctacaataggacttgtttgaaac 19664677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 29677476 - 29677616
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  29677476 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaaatgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 29677575  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    || ||| ||| ||| ||| ||| ||  ||||||||||||||    
T  29677576 acaaactatgatatctacgataggacctgtttgaaacgatt 29677616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 1448873 - 1448768
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  1448873 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgatactaaagatgagttcaaggaagcaatt 1448774  T
Q  113 accaac 118  Q
    ||||||    
T  1448773 accaac 1448768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 12748391 - 12748524
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  || |||| |||||||||||||||||||||||||||||    
T  12748391 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttagaaaacagatttggtaccaaagatgagttcaaggaagcaatt 12748490  T
Q  113 accaac-atgttatatacaatacgatttgtttga 145  Q
    |||||| ||| ||| ||||||| || ||||||||    
T  12748491 accaactatgctatctacaataggacttgtttga 12748524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 32650957 - 32650856
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  32650957 cattatccaccatttgccatgcctagaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 32650858  T
Q  117 ac 118  Q
    ||    
T  32650857 ac 32650856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 40922302 - 40922165
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||  |||||||||||| || ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  40922302 cattatccaccattttccatgcctaaaaaaattactaattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagtaattacca 40922203  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| |||||||||| ||||||||||||||||    
T  40922202 actatgctatctacaatacgacttgtttgaaacgattc 40922165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 44798268 - 44798408
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||    
T  44798268 agagcattatccaccatttgacatgcctaaaaa-atgagtaattttaagtgggtgttaggagccagattcggtaccaaagatgagttcaagaaagcaatt 44798366  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  44798367 accaactatgctatctacaataggacttgtttgaaacgattc 44798408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 52821190 - 52821049
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||||| |||||||||    
T  52821190 agagcattatccatcatttgttatgcctaaaaagatgactaattttaagtgggtgttaggagccagttttactaccaaagatgagttcaaagaagcaatt 52821091  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||| | || |||||| |||||||||    
T  52821090 accaactatgttatctacaacaggacttgtttaaaacgattc 52821049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 3697148 - 3697287
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||| |||||||||||    
T  3697148 agcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagcgagatttggtaccaaagatgaattcaatgaagcaattac 3697247  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||  ||| ||||||| || |||||||||| |||||    
T  3697248 caactatactatctacaataggacttgtttgaaaggattc 3697287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 20913893 - 20913754
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||     
T  20913893 agcattattcaccattcgccatgcctaaaaagatgactaattttaagtggatgttaggagccatatttggtaccaaagatgagttcaaagaagcaattat 20913794  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| |||||||  | ||||||||||||||||    
T  20913793 caactatgctatctacaatagaacttgtttgaaacgattc 20913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 20922011 - 20921872
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||     
T  20922011 agcattattcaccattcgccatgcctaaaaagatgactaattttaagtggatgttaggagccatatttggtaccaaagatgagttcaaagaagcaattat 20921912  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| |||||||  | ||||||||||||||||    
T  20921911 caactatgctatctacaatagaacttgtttgaaacgattc 20921872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 27070880 - 27070739
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| | ||| || |||||||||||||||||||||| |||||||||| || |||| ||| |||||||||||||||||||||||||    
T  27070880 agagcattatccaccatttataatgtctgaaaagatgactaattttaagtgagtgttaggaggcagatttggtatcaaagatgagttcaaggaagcaatt 27070781  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  27070780 accaactatgctatctacaataagacttgtttgaaacgattc 27070739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 35608272 - 35608131
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  |||| ||||||||||||||||||||||| |||||    
T  35608272 agagtattatccaccatttgtcatgcctaaaaagatgactaagtttaagtgggtgttaggagtccgatttggtaccaaagatgagttcaaggaaccaatt 35608173  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| ||||||| || || |||||||||||||    
T  35608172 accaattatgctatctacaataggacttatttgaaacgattc 35608131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 48651248 - 48651389
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||| |||| ||| |||||||||||| ||||||||||||    
T  48651248 agagcattatccaccatttgccatgcctaaaaagacgattaattttaagtgggtgttagaagccagatttggtatcaaagatgagtttaaggaagcaatt 48651347  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||| || || ||||||||||||||||    
T  48651348 accaactatgctatctacattaggacttgtttgaaacgattc 48651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 50365028 - 50364908
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||| |||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  50365028 agagcattacccaccatttgccatgcctaaaaagattactgattttaagtgagtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaatt 50364929  T
Q  113 accaac-atgttatatacaat 132  Q
    |||||| ||||||| ||||||    
T  50364928 accaactatgttatctacaat 50364908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 50977866 - 50977969
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  50977866 agcattatccaccatttgtcatgcctaaaaacatgactgattttaagtgggcgttaggagccagatttggtaccaaagatgagttcaaggaagcaactac 50977965  T
Q  115 caac 118  Q
    ||||    
T  50977966 caac 50977969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 51080998 - 51081101
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  51080998 agcattatccaccatttgtcatgcctaaaaacatgactgattttaagtgggcgttaggagccagatttggtaccaaagatgagttcaaggaagcaactac 51081097  T
Q  115 caac 118  Q
    ||||    
T  51081098 caac 51081101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 51475383 - 51475282
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || |||| ||| |||||||||||||||||||||||||||||    
T  51475383 cattatccaccatttgtcatgcctaaaaagatgactgattttaagtgggtgttatgaggcagatttggtatcaaagatgagttcaaggaagcaattacca 51475284  T
Q  117 ac 118  Q
    ||    
T  51475283 ac 51475282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 55164256 - 55164115
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||  || |||||||||||||||||||||||||    
T  55164256 agagcattatccactatttatcatgcctaaaaagatgactaattttaagtaggtgttaggagccagatttgatatcaaagatgagttcaaggaagcaatt 55164157  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| ||| ||||||| || || |||||||| ||||    
T  55164156 agcaactatgctatctacaatatgacttatttgaaacaattc 55164115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 28699685 - 28699785
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||| || ||||||||||||||||||||||||||    
T  28699685 agagcattatccaccatttgccatgcctaaaaagatgactgattttaagtgggtgttaggagtcagatttggtgccaaagatgagttcaaggaagcaatt 28699784  T
Q  113 a 113  Q
    |    
T  28699785 a 28699785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 33473380 - 33473239
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| | ||| |||| ||||||||||| |  |||||||| |||||    
T  33473380 agagcattatccaccatttatcatgactaaaaagatgactaattttaagtgcgtgttagaaaccagatttggtaccaaagataaaatcaaggaaacaatt 33473281  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||||||  | ||||||||||||||||    
T  33473280 accaactatgttatctacaataaaacttgtttgaaacgattc 33473239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 39069726 - 39069867
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||| |||||| |||||    
T  39069726 agagcattatccaccatttgccatgcatgaaaagatgactaattttaagtgggtgttaagagccagatttggtaccaaagataagttaaaggaaacaatt 39069825  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| |||  |||||| || ||||||||||||||||    
T  39069826 atcaactatgctattaacaatatgacttgtttgaaacgattc 39069867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 45380401 - 45380260
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||| || |||||||||    
T  45380401 agagcattatccaccatttaccatgcataaaaagatgactaattttaagt-ggtgttatgagccagatttggtaccaaagatgagtttaaagaagcaatt 45380303  T
Q  113 accaa--catgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||   ||| ||| |||||||  | ||||||||||||||||    
T  45380302 atcaaactatgctatctacaatagaacttgtttgaaacgattc 45380260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 44152700 - 44152777
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaa 90  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| |||||||    
T  44152700 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtgggtgttaggagtcagatttggtaccaa 44152777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 47473230 - 47473295
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccat 78  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  47473230 agagcattatccaccatttgtcatgcctaaaaagatggctaattttaagtggatgttaggagccat 47473295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 34019462 - 34019565
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||| |||||||||||| ||| || ||||||||||||||||||||| || |||| |||||||   |||||||||| |||||||||     
T  34019462 agcattatccaccatttgacatgcctaaaaatatggctgattttaagtgggtgttaggagtcagatttggtaccaacagtgagttcaagtaagcaattat 34019561  T
Q  115 caac 118  Q
    ||||    
T  34019562 caac 34019565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 38924124 - 38923998
Alignment:
Q  28 atttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttata 126  Q
    ||||||||||| |||| |||||| ||||||||||||| ||||||||| |  |||| ||||||||||| ||||||| ||||||||||||||| || ||||     
T  38924124 atttgtcatgcttaaagagatgattaattttaagtggatgttaggagtccaatttggtaccaaagataagttcaacgaagcaattaccaactattttatc 38924025  T
Q  127 tacaatacgatttgtttgaaacgattc 153  Q
    ||| ||| || ||||||||||| ||||    
T  38924024 tacgataggacttgtttgaaacaattc 38923998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 42641288 - 42641214
Alignment:
Q  44 aagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac 118  Q
    ||||||| | ||||||||||||||||||||| || | || |||||||||||||||||||||||||||||||||||    
T  42641288 aagatgattgattttaagtgggtgttaggaggcagacttggtaccaaagatgagttcaaggaagcaattaccaac 42641214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 28775412 - 28775383
Alignment:
Q  219 cttaaaagacctttagatgcatttgaccta 248  Q
    ||||||||||||||||||||||||||||||    
T  28775412 cttaaaagacctttagatgcatttgaccta 28775383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 2390267 - 2390406
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  2390267 agcattatccaccatttgtcatgcctaaaaagatgactaattataagtgggtgttaggagctatatttggtaccaaagatgagttcaaggaagcaattac 2390366  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||||||| ||||||| || ||||||||||||||||    
T  2390367 caactatgttatctacaataggacttgtttgaaacgattc 2390406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 6503718 - 6503858
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  6503718 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgggttcaaggaagcaatt 6503817  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| ||||||| || |||||||||||||||    
T  6503818 accaactatgatatctacaataggacttgtttgaaacgatt 6503858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 3408189 - 3408330
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  3408189 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaatt 3408288  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||  ||| ||||||| || ||||||||||||||||    
T  3408289 accaactatactatctacaatatgacttgtttgaaacgattc 3408330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 1915484 - 1915343
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  1915484 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaatt 1915385  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  1915384 accaactatgctatctacaataggacttgtttgaaactattc 1915343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 2707459 - 2707600
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  2707459 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagacgagttcaaggaagcaatt 2707558  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  2707559 accaactatgatatctacaataggacttgtttgaaacgattc 2707600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 9382519 - 9382660
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  9382519 agagcattatccaccatttgtcatgcttaaaaagatgactaattttaagtgggtgttaggaggcagatttggtaccaaagatgagttcaaggaagcaatt 9382618  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||  | || ||||||||||||||||    
T  9382619 accaactatgttatctacatcaggacttgtttgaaacgattc 9382660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 10256237 - 10256378
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  10256237 agagcattatccaccatttgcaatgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtaccaaagatgagttcaaggaagcaatt 10256336  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  10256337 accaactatgctatctacaataggacttgtttgaaacgattc 10256378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 12626636 - 12626777
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  12626636 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagataagttcaaggaagcaatt 12626735  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||  ||| ||||||| || ||||||||||||||||    
T  12626736 accaactattctatctacaataggacttgtttgaaacgattc 12626777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 17428409 - 17428272
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  17428409 cattattcaccgtttgtcatgcctaaaaagatgactaattttaagtggatgttaggagccagatttagtaccaaagatgagttcaaggaagcaattacca 17428310  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||||| || ||||||||||||||||    
T  17428309 actatgttatctacaataggacttgtttgaaacgattc 17428272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 26231073 - 26230932
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| || |    
T  26231073 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagaaact 26230974  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||| || || ||||||||||||||||    
T  26230973 accaactatgttatttacattaggacttgtttgaaacgattc 26230932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 8178390 - 8178249
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  8178390 agagcattatccaccatttgccatgcttaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaatt 8178291  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| ||  |||||||||||||||    
T  8178290 accaactatgctatctacaataggacatgtttgaaacgattc 8178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 26393146 - 26393009
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  26393146 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 26393047  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| |||||||  | || |||||||||||||    
T  26393046 actatgctatctacaatagaagttttttgaaacgattc 26393009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 29050272 - 29050413
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  29050272 agagcattacccaccattcgccatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 29050371  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  29050372 accaactatgctatctacaataggacttgtttgaaacgattc 29050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 30379021 - 30379158
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  30379021 cattatccaccatttaccatgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaaggaagcaattacca 30379120  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  30379121 actatgctatctacaataggacttgtttgaaacgattc 30379158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 17943040 - 17943177
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  17943040 cattatccactatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagtttaaggaagcaattacca 17943139  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  ||| ||| |||| || || ||||||||||||||||    
T  17943140 attatgctatctacattaggacttgtttgaaacgattc 17943177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 16193314 - 16193415
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  16193314 cattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtatcaaagatgagttcaaggaagcaattacca 16193413  T
Q  117 ac 118  Q
    ||    
T  16193414 ac 16193415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 3258948 - 3258807
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  3258948 agagcgttatccaccatttgtcatgcataaaaagatgactaattttaagtgg-tgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 3258850  T
Q  113 accaa--catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||   ||| ||| |||||||  | ||||||||||||||||    
T  3258849 accaaactatggtatctacaatagaacttgtttgaaacgattc 3258807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 2598229 - 2598099
Alignment:
Q  24 caccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgt 122  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||| |||     
T  2598229 caccatttgccatgcctaaaaagatgagtaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaataaagcaattaccaactatga 2598130  T
Q  123 tatatacaatacgatttgtttgaaacgattc 153  Q
    ||| ||||||| || ||||||||||||||||    
T  2598129 tatctacaatatgacttgtttgaaacgattc 2598099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 11133873 - 11134015
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttc-aaggaagcaat 111  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  11133873 agagcattatccatcatttgttatgtctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaaggaagcaat 11133972  T
Q  112 taccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||| | ||| ||| ||| ||| || ||||||||||||||||    
T  11133973 taccatctatgctatctacgataggacttgtttgaaacgattc 11134015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 1077241 - 1077378
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||    
T  1077241 cattatccaccatttgccatgcctaaaaagatgattaattttaagtgggtgttaggaaccagatttgataccaaagatgagttcaaggaagcaattacca 1077340  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||| | || || |||||||||||||    
T  1077341 actatgctatctacaacatgacttatttgaaacgattc 1077378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 26936607 - 26936712
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  26936607 agagtattatccaccatttgtcatgcctaaaaagatgactgattttaagtgggtgttaggagccggatttggtaccaaagatgagttcaaggaaacaatt 26936706  T
Q  113 accaac 118  Q
    | ||||    
T  26936707 atcaac 26936712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 26196458 - 26196321
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  26196458 cattatccaccatttgtcatgcctaaaaagatgattaattttaagt-gttgttaggagccagatttagtaccaaagatgagttcacggaagcaattacca 26196360  T
Q  117 a--catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |   ||||||| ||||||| || ||| ||||| ||||||    
T  26196359 aactatgttatctacaataggacttggttgaaccgattc 26196321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 35224025 - 35223935
Alignment:
Q  28 atttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac 118  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||||||||||||||||||||    
T  35224025 atttgacatgcctaaaaagatgactaattttaagtgggtgttaggagctagatttgataccaaagatgagttcaaggaagcaattaccaac 35223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 6785239 - 6785101
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| ||  ||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||       
T  6785239 agagcattatacaaaatttgacatgactaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaatatgagttcaaggaagca--- 6785143  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||||||| |||| || || ||||||||||||||||    
T  6785142 accaattatgttatctacattaggacttgtttgaaacgattc 6785101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 10931288 - 10931187
Alignment:
Q  17 cattatccaccatttgt----catgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| |    |||||||||||||||||||||||||||| ||||||||| || || |||| |||||||||||||||||||| || |||||    
T  10931288 cattatccaccatttctcatgcatgcctaaaaagatgactaattttaagcgggtgttagaagtcagatttggtaccaaagatgagttcaagaaaacaatt 10931189  T
Q  113 ac 114  Q
    ||    
T  10931188 ac 10931187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 25820686 - 25820550
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||  ||||| |||| ||||||  |||||||||||||| ||||||||| |||  | |||| |||||||| |||||||||| |||||||||||||    
T  25820686 cattatccataatttgacatgactaaaattatgactaattttaaatgggtgttatgagttagatttggtaccaaacatgagttcaatgaagcaattacca 25820587  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    || ||| ||| ||| ||| || |||||||||||||||    
T  25820586 actatgctatctacgataggaattgtttgaaacgatt 25820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 31375971 - 31376058
Alignment:
Q  67 gttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||| |||| ||| ||| ||||||| || ||||||||||||||||    
T  31375971 gttaggagccagatttggtaccaaagataagttcaaggaagcaattaacaactatgctatctacaataggacttgtttgaaacgattc 31376058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 12613029 - 12612971
Alignment:
Q  96 agttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||||||||||||||||||| ||| ||| ||||||| || ||||||||||||||||    
T  12613029 agttcaaggaagcaattaccaactatgctatctacaataggacttgtttgaaacgattc 12612971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 2390139 - 2390110
Alignment:
Q  219 cttaaaagacctttagatgcatttgaccta 248  Q
    ||||||||||||||||||||||||||||||    
T  2390139 cttaaaagacctttagatgcatttgaccta 2390110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 7e-53; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 2533272 - 2533413
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  2533272 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgtttggagccagatttggtaccaaagatgagttcaaggaagcaatt 2533371  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  2533372 accaactatgatatctacaatatgacttgtttgaaacgattc 2533413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 3875908 - 3876049
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |||||||||||||||||||||||||||||    
T  3875908 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaaccagatatagtaccaaagatgagttcaaggaagcaatt 3876007  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  3876008 accaactatgttatctacaataggacttgtttgaaacgattc 3876049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 37933646 - 37933783
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  37933646 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 37933745  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||| ||| || ||||||||||||||||    
T  37933746 actatgctatctacgataagacttgtttgaaacgattc 37933783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 15847117 - 15847253
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  15847117 attatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattaccaa 15847216  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||| ||| ||||||| || ||||||||||||||||    
T  15847217 ctatgctatctacaataggacttgtttgaaacgattc 15847253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 35884569 - 35884430
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  35884569 agcattatcctccatttgccatgcctaaaaagatgactaattttaagtgggtgttacgagccagatttggtaccaaagatgagttcaaggaagcaattac 35884470  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||||||| ||||||| || ||||||||||||||||    
T  35884469 caactatgttatctacaataagacttgtttgaaacgattc 35884430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 513308 - 513448
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  513308 agagcattatccaccatttgtcacgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 513406  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  513407 accaactatgctatctacaataggacttgtttgaaacgattc 513448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 1293486 - 1293627
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||  ||||||||||||||||||||||||||||    
T  1293486 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttagaaaccagatttgataccaaagatgagttcaaggaagcaatt 1293585  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||| | || ||||||||||||||||    
T  1293586 accaactatgttatctacaacatgacttgtttgaaacgattc 1293627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28707587 - 28707446
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||||    
T  28707587 agagcattatccaccatttgtcatgccttaaaagatgactaattttaagtgggtgttatgagccagatttggtatcaaagatgagttcaaggaagcaatt 28707488  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| ||||||| |||||||||||||||||||    
T  28707487 accaattatgatatctacaataggatttgtttgaaacgattc 28707446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 36400211 - 36400070
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || || |||| |||||||||||||||||||||||||||||    
T  36400211 agagcattatccaccatttgtcatgcctaaaaagatgactaagtttaagtgggtgttagaaggcagatttggtaccaaagatgagttcaaggaagcaatt 36400112  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  36400111 accaactatgctatctacaatatgacttgtttgaaacgattc 36400070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 38107103 - 38107240
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  38107103 cattatccaccatttatcatgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 38107202  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  38107203 actatgctatctacaataagacttgtttgaaacgattc 38107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 43806674 - 43806533
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  43806674 agagcattatccatcatttgccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttagtaccaaagatgagttcaaggaagcaatt 43806575  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  43806574 accaactatgctatctacaatatgacttgtttgaaacgattc 43806533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 22684129 - 22683988
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  22684129 agagcattattcaccatttgtcatggctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaaacaatt 22684030  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || |||||||||| |||||    
T  22684029 accaactatgatatctacaatatgacttgtttgaaatgattc 22683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 35443311 - 35443452
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  35443311 agagcattatccactatttgccatgcctaaaaagataactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 35443410  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||||||  | ||||||||||||||||    
T  35443411 accaactatgctatctacaatagaacttgtttgaaacgattc 35443452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 259982 - 260118
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  259982 cattatccacaatctgtcatgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 260080  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  260081 actatgctatctacaatatgacttgtttgaaacgattc 260118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 655939 - 655803
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  655939 cattatccacaatctgtcatgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 655841  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  655840 actatgctatctacaatatgacttgtttgaaacgattc 655803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 841674 - 841538
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  841674 cattatccacaatctgtcatgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 841576  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  841575 actatgctatctacaatatgacttgtttgaaacgattc 841538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 9056479 - 9056338
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||| ||| ||||||||||||||| |||||||||    
T  9056479 agagcattatccaccatttatcatgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtatcaaagatgagttcaaagaagcaatt 9056380  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||| ||||    
T  9056379 accaactatgttatctacaataggacttgtttgaaacaattc 9056338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 7434886 - 7435006
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  7434886 agagcattatccaccatttgtcaagcctataaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 7434985  T
Q  113 accaac-atgttatatacaat 132  Q
    |||||| ||||||| ||||||    
T  7434986 accaactatgttatctacaat 7435006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 440844 - 440981
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||| |||| |||| |||||||||||| |||||||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||    
T  440844 cattatccaccgtttgccatgtctaaaaagatgagtaattttaagtgggtgttaggagccagatttggtacgaaaaatgagttcaaggaagcaattacca 440943  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||||||||||| || ||||||||||||||||    
T  440944 actatgctatatacaataggacttgtttgaaacgattc 440981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28496495 - 28496355
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| || | | |||| |||||||||||||||||||||||||||||    
T  28496495 agagtattatccatcatttgtcatgcctaaaaagatgactaattttaagtgggtatta-gaactagatttggtaccaaagatgagttcaaggaagcaatt 28496397  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  28496396 accaactatgttatctacaataggacttgtttgaaacgattc 28496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 38633851 - 38633710
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  || |||| |||||||||||||||||||||||||||||    
T  38633851 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttagaaatcagatttggtaccaaagatgagttcaaggaagcaatt 38633752  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||| ||  | ||||||||||||||||    
T  38633751 accaactatgctatctacattagaacttgtttgaaacgattc 38633710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 23972437 - 23972295
Alignment:
Q  13 agagcattatccaccattt-gtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaat 111  Q
    |||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||| |||||| || |||| |||||||| |||||||||||||||||||    
T  23972437 agagtattatccaacattttgtcatgtctaaaaagatgactaattttaagtgggtgataggagtcagatttggtaccaaaaatgagttcaaggaagcaat 23972338  T
Q  112 taccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||| ||||||| ||||||| || ||||||||||||||||    
T  23972337 taccaactatgttatctacaatatgacttgtttgaaacgattc 23972295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 38208756 - 38208894
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaag-atgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacc 115  Q
    |||||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||||    
T  38208756 cattatccaccatttgccatgtctaaaatggatgactaattttaagtgggtgttaggagccagatttggtagcaaagatgagttcaaagaagcaattacc 38208855  T
Q  116 aac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||| ||||||| ||||||| || ||||||||||||||||    
T  38208856 aactatgttatctacaatatgacttgtttgaaacgattc 38208894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 41536653 - 41536527
Alignment:
Q  28 atttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttata 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| | ||||||||||||||||||||| ||| |||     
T  41536653 atttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagataaattcaaggaagcaattaccaactatgctatc 41536554  T
Q  127 tacaatacgatttgtttgaaacgattc 153  Q
    ||||||| || ||||||||||||||||    
T  41536553 tacaataggacttgtttgaaacgattc 41536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 12010549 - 12010654
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | |||||    
T  12010549 agagcattatccaccatttgccatgcataaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggcaacaatt 12010648  T
Q  113 accaac 118  Q
    ||||||    
T  12010649 accaac 12010654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 13797089 - 13797229
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||  ||||||| |||||||||| |||||||||    
T  13797089 agagcatcgtccaccatttgtcatacctaaaaagatgactaattttatgtggatgttaggagccagatttgataccaaa-atgagttcaaagaagcaatt 13797187  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||||||||||| |||||||||||||||||||    
T  13797188 accaactatgctatatacaataggatttgtttgaaacgattc 13797229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 23935233 - 23935338
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  23935233 agagcattatccaccatttgccatgcctaaaaagatgactgattttaagtgggtgttaggagccagatttggtactaaagatgagttcaaggaagcaatt 23935332  T
Q  113 accaac 118  Q
    | ||||    
T  23935333 atcaac 23935338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 33651841 - 33651982
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || |||| |||  |||||||||||||||||| |||||    
T  33651841 agagcattatccaccgtttgtcatgtctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtatgaaagatgagttcaaggaaacaatt 33651940  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||| ||| ||| || ||||||||||||||||    
T  33651941 acaaactatgctatctacgataggacttgtttgaaacgattc 33651982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 40302030 - 40301893
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||| ||||||||||| | ||||| |||||||||||||    
T  40302030 cattatccaccatttgtcatgcctaaaaagatgattaattttaagtgagtgttaggagctagatttggtaccaaagataaattcaatgaagcaattacca 40301931  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || || |||||||||||||    
T  40301930 actatgctatctacaatatgacttttttgaaacgattc 40301893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 39513480 - 39513344
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||||| ||||||||    
T  39513480 agagtattatccaccatatgccatgcctaaaaagatgactaattttaagtgggtgttaggagttagatttggtaccaaagatgagttcaagaaagcaatt 39513381  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaac 148  Q
    |||||| ||||||| |||| || || || ||||||||    
T  39513380 accaactatgttatctacattaggacttatttgaaac 39513344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 24430712 - 24430571
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  | |||| |||||||||||||||||||  || |||||    
T  24430712 agagcattatccaccttttgtcatgcctaaaaagatgactaattttaagtgggtgttagtagtgagatttggtaccaaagatgagttcaataaaacaatt 24430613  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||  ||| ||||||| || ||||||||||||||||    
T  24430612 atcaactatactatctacaataggacttgtttgaaacgattc 24430571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 29485287 - 29485406
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||||||  | |||| |||||||||||||||||||||||||||||    
T  29485287 agagcattatccatcatttgccatgcctaaaaa-atgactgattttaagtgggtgttaggagttagatttggtaccaaagatgagttcaaggaagcaatt 29485385  T
Q  113 accaac-atgttatatacaat 132  Q
    |||||| ||||||| ||||||    
T  29485386 accaactatgttatctacaat 29485406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 6016207 - 6016310
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||  ||| |||||||||||| || |||||||||||    
T  6016207 agcattatccaccatttgtcatgcctaaaaagatgactgattttaagtggatgttaggagccaaattgagtatcaaagatgagtttaaagaagcaattac 6016306  T
Q  115 caac 118  Q
    ||||    
T  6016307 caac 6016310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 42988367 - 42988227
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||| || |||| || |||||||||    
T  42988367 agagcattatctaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagttagatttggtaccaaatataagttaaatgaagcaatt 42988268  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| || |||| ||||||| || || |||||||||||||    
T  42988267 atcaactatattatctacaataggactt-tttgaaacgattc 42988227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 4649154 - 4649291
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||| | || || |||| |||||||||| |||||||||||| |||||||||    
T  4649154 cattatccaccatttgccatgcctaaaaaaatgactaattttaagtggatgttggaagtcagatttggtaccaaagacgagttcaaggaaacaattacca 4649253  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  ||| ||| ||||||  || ||||||||||||||||    
T  4649254 attatgctatctacaattggacttgtttgaaacgattc 4649291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 36218917 - 36218781
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||| || || |||| ||||||||||||||||||| |||||||||| ||    
T  36218917 cattatccaccatttgccatgcctaaaaagatggctaattttaagtgggtgctagaagtcagatttggtaccaaagatgagttcaa-gaagcaattatca 36218819  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || || |||| ||||  | || ||||||||||||||||    
T  36218818 actatattatctacatcatgacttgtttgaaacgattc 36218781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 24193433 - 24193356
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaa 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  24193433 agagcattattcaccatttgtcatgcctaaaaagatgactaattttaagt-ggtgttaggagccagatttggtaccaaa 24193356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 24193195 - 24193131
Alignment:
Q  89 aaagatgagttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||    
T  24193195 aaagatgagttcaaggaagcaattaccaactatgttatctacaataggacttgtttgaaacgatt 24193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 8137180 - 8137238
Alignment:
Q  19 ttatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagcca 77  Q
    ||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||    
T  8137180 ttatccaccatttgctatgcctaaaaaaatgactaattttaagtaggtgttaggagcca 8137238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 247
Target Start/End: Original strand, 13797295 - 13797323
Alignment:
Q  219 cttaaaagacctttagatgcatttgacct 247  Q
    |||||||||||||||||||||||||||||    
T  13797295 cttaaaagacctttagatgcatttgacct 13797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 35443518 - 35443550
Alignment:
Q  219 cttaaaagacctttagatgcatttgacctattc 251  Q
    |||||| ||||||||||||||||||||||||||    
T  35443518 cttaaaggacctttagatgcatttgacctattc 35443550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 7e-53; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 4545126 - 4544985
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||||||||    
T  4545126 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagtttaaggaagcaatt 4545027  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  4545026 accaactatgttatctacaataggacttgtttgaaacgattc 4544985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 33807921 - 33807780
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  33807921 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaagaagcaatt 33807822  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  33807821 accaactatgctatctacaataggacttgtttgaaacgattc 33807780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 42273802 - 42273943
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  42273802 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 42273901  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  42273902 accaactatgctatctacaataggacttgtttgaaacgattc 42273943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 11795295 - 11795154
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  11795295 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaaacaatt 11795196  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| || |||| || ||||||||||||||||    
T  11795195 accaactatgctatctagaatatgacttgtttgaaacgattc 11795154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 28264643 - 28264784
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||||||||||||    
T  28264643 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttatgagacagatttggtaccaaagatgagttcaaggaagcaatt 28264742  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  28264743 accaactatgctatctacaataggacttgtttgaaacgattc 28264784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 55517326 - 55517185
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| |||||||||    
T  55517326 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaagaagcaatt 55517227  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  55517226 accaactatgctatctacaatatgacttgtttgaaacgattc 55517185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 24458770 - 24458631
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  24458770 agcattatcctccatttgccatgcctaaaaagatgactaattttaagtgggtgttacgagccagatttggtaccaaagatgagttcaaggaagcaattac 24458671  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||||||| ||||||| || ||||||||||||||||    
T  24458670 caactatgttatctacaataagacttgtttgaaacgattc 24458631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 26017425 - 26017564
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  26017425 agcattatccactatttatcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattac 26017524  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| ||||||| || ||||||||||||||||    
T  26017525 caactatgctatctacaataggacttgtttgaaacgattc 26017564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 12196469 - 12196610
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  12196469 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcaaggaagcaatt 12196568  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || |||||||||| |||||    
T  12196569 accaactatgctatctacaataggacttgtttgaaatgattc 12196610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 19496243 - 19496102
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  19496243 agagcattatccaccatttgacatgcctaaaaagatgactaattttaagtgggtgttaggcgccaaatttggtaccaaagatgagttcaaggaagcaatt 19496144  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  19496143 accaactatggtatctacaataggacttgtttgaaacaattc 19496102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 23135143 - 23135006
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  23135143 cattagccaccatttggcatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 23135044  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||||| || ||||||||||||||||    
T  23135043 actatgttatctacaataggacttgtttgaaacgattc 23135006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28160094 - 28159953
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  28160094 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaagaaagcaatt 28159995  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || |||||||||| |||||    
T  28159994 accaactatggtatctacaataagacttgtttgaaatgattc 28159953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 31591076 - 31591216
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  31591076 agagcattatccaccatttgtcacgcctaaaaa-atgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 31591174  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  31591175 accaactatgctatctacaataggacttgtttgaaacgattc 31591216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 31973591 - 31973732
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  31973591 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 31973690  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||||||  | ||||||||||||||||    
T  31973691 accaactatgctatctacaatagaacttgtttgaaacgattc 31973732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 32317957 - 32318094
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||||||    
T  32317957 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagacagatttggtaccaaagatgagttcaatgaagcaattacca 32318056  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||||| || |||||||||| |||||    
T  32318057 actatgttatctacaataggacttgtttgaaatgattc 32318094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 48551901 - 48551764
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  48551901 cattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcagattttgtaccaaagatgagttcaagaaagcaattacca 48551802  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| ||||||| || ||||||||||||||||    
T  48551801 accatgctatctacaatatgacttgtttgaaacgattc 48551764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 48707874 - 48707733
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||||    
T  48707874 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 48707775  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || |||||||||| |||||    
T  48707774 accaactatgctatctacaataggacttgtttgaaaagattc 48707733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 40988633 - 40988773
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  40988633 agagcattatccacaatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaggaagcaatt 40988732  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    | |||| ||| ||| ||||||| || |||||||||||||||    
T  40988733 atcaactatgctatctacaataggacttgtttgaaacgatt 40988773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 49118616 - 49118752
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||||    
T  49118616 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaattaccaa 49118715  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||| ||| ||||||| || ||||||||||||||||    
T  49118716 ctatgctatctacaataggacttgtttgaaacgattc 49118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 2055280 - 2055419
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||     
T  2055280 agcattatccaccatttgtcatgcctaaaaagatgattaactttaagtgggtgttaggagccagatttggtaccaaagatgagtttaaggaagcaattat 2055379  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||||||| ||||||| || ||||||||||||||||    
T  2055380 caactatgttatctacaatatgacttgtttgaaacgattc 2055419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 33174160 - 33174021
Alignment:
Q  14 gagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatta 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  33174160 gagcattatccaccatttgtcatgcataaaaagatgactaattttaagtgggtgttaggagccagatttggtactaaagatgagttcaaggaagcaatta 33174061  T
Q  114 ccaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    ||||| |||  || ||||||| || |||||||||||||||    
T  33174060 ccaactatgaaatctacaataagacttgtttgaaacgatt 33174021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 48149502 - 48149640
Alignment:
Q  16 gcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacc 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||||    
T  48149502 gcattatccaccatttgtcatgcctaaaaagatgagtaattttaagtgggtgtcaggagtcagatttggtaccaaagatgagttcaaggaagcaattacc 48149601  T
Q  116 aac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||| ||||||| |||| || || ||||||||||||||||    
T  48149602 aactatgttatctacattaggacttgtttgaaacgattc 48149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 5227390 - 5227531
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| |||| |||||||| ||||||||||||||||||||    
T  5227390 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatactaggagccagatttggtaccaaaaatgagttcaaggaagcaatt 5227489  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  5227490 accaactatgctatctacaataggacttgtttgaaacgattc 5227531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 15985010 - 15985151
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  15985010 agagcattatccaccatttgtcatgcctaaaaagattactgattttaagtaggtgttaggagccagatttggtactaaagatgagttcaaggaagcaatt 15985109  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| || |||| || ||||||||||||||||    
T  15985110 accaactatgttatctagaatatgacttgtttgaaacgattc 15985151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28812427 - 28812287
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  28812427 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagt-ggtgttaggagccagatttggtaccaaagatgacttcaaggaagcaatt 28812329  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  28812328 accaactatgctatctacaataggacttgtttgaaacgattc 28812287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 44490324 - 44490460
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||| ||||||||||||||    
T  44490324 attatccaccatttgtcatgcctaaaaagatgactaactttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaattaccaa 44490423  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | ||| ||| ||||||| || ||||||||||||||||    
T  44490424 ctatgatatctacaataggacttgtttgaaacgattc 44490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 8882152 - 8882013
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||     
T  8882152 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttgataccaaagatgagttcaaagaagcaattat 8882053  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| || |||| || ||||||||||||||||    
T  8882052 caactatgctatctagaataggacttgtttgaaacgattc 8882013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 9339267 - 9339123
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaa---gatgagttcaaggaagca 109  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||   ||||||||||||||||||    
T  9339267 agagcattattcaccatttgtcatgcataaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaatatgatgagttcaaggaagca 9339168  T
Q  110 attaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||||| ||||||| ||||||| || |||||||||| |||||    
T  9339167 attaccaactatgttatctacaatatgacttgtttgaaatgattc 9339123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 14564796 - 14564937
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |||| ||| |||||||||| |||||||||    
T  14564796 agagcattatccaccgtttgccatgcctaaaaagatgactaattttaactgggtgttaggagccagatttggtacgaaaaatgagttcaatgaagcaatt 14564895  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||||||||||| || ||||||||||||||||    
T  14564896 accaactatgctatatacaataggacttgtttgaaacgattc 14564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 17847236 - 17847096
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  17847236 agagcattatccaccatttgccatgcctaaaa-gatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaatt 17847138  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| ||||||| || ||||||||||||||||    
T  17847137 accaattatgctatctacaataggacttgtttgaaacgattc 17847096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 35930040 - 35930180
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  35930040 agagcattatccacc-tttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaaaatgagttcatggaagcaatt 35930138  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||||||  | ||||||||||||||||    
T  35930139 accaactatgctatctacaatagaacttgtttgaaacgattc 35930180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 39995308 - 39995167
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||||    
T  39995308 agaggattatccaccatttgccatgcctaaaaagatgattaattttaagtgggttttaggagccagatttggtaccaaagatgagttcaatgaagcaatt 39995209  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| |||||||  | ||||||||||||||||    
T  39995208 accaactatgttatctacaatagaacttgtttgaaacgattc 39995167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 50542495 - 50542354
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  50542495 agagcattatccaccatttaccatgcctaaaaagatgattaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaatgaagcaatt 50542396  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| ||||||||| |||||||||    
T  50542395 accaactatgctatctacaataagatttgtttaaaacgattc 50542354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 32118714 - 32118854
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  32118714 agagcgttatccaccatttgtcatgcctaaaaagatgattaattttaagggggtgttaggagccagatttggtaccaaagatgagttcaatgaagcaatt 32118813  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| |||||||  | |||||||||||||||    
T  32118814 accaactatgctatctacaatagaacttgtttgaaacgatt 32118854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 10588580 - 10588719
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||  ||||||  |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  10588580 agagcattatctgccatttaccatgcctaaaaagatgactagttttaagtgggtgttaggagccagatttggtaccaaatatgagttcaaggaagcaatt 10588679  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgat 151  Q
    |||||| ||| ||| |||||||||| ||||||||||||||    
T  10588680 accaactatgctatctacaatacgacttgtttgaaacgat 10588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 17993158 - 17993017
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  ||  ||||||||||| ||||||||||||    
T  17993158 agagcattatccactatttgtcatgcctaaaaagatgactaattttaagtgggtgttaagagccaaatttgatagaaaagatgagtttaaggaagcaatt 17993059  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  17993058 accaactatgctatttacaataggacttgtttgaaacgattc 17993017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 24623148 - 24623253
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  24623148 agagcattatccaccatttgtcatgcctaaaaaaataactgattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 24623247  T
Q  113 accaac 118  Q
    ||||||    
T  24623248 accaac 24623253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 25734360 - 25734223
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||||||  ||||||||||||    
T  25734360 cattatccaccgtttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaggcagatttggtacgaaagatgagttcaattaagcaattacca 25734261  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||| ||||||| || |||||||||| |||||    
T  25734260 actatgttatctacaataggacttgtttgaaatgattc 25734223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 30467140 - 30467003
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||||| ||||||||    
T  30467140 cattatccaccatttgccatgcctaaaaagatgactaattttaaatgggtgttaggagcgagatttggtaccaaagatgagttcaaggaagaaattacca 30467041  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| |||||||  | ||||||||||||||||    
T  30467040 actatgctatctacaatagaacttgtttgaaacgattc 30467003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 39700045 - 39700186
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||| |||||    
T  39700045 agagcattattcacaatttgtcatgcctaaaaagatgactaattttaagtgagtgttaagagccagatttggtaccaaagatgagttcaaggaaacaatt 39700144  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||||||| || |||| || ||||||||||||||||    
T  39700145 accaattatgttatctataataagacttgtttgaaacgattc 39700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 37381848 - 37381986
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || | |||||||| ||||||| ||||||||||||||    
T  37381848 agcattatccaccatttgtcatgtctaaaaagatgactaattttaagtgggtgttaggaaccagatatggtaccaaaaatgagtttaaggaagcaattac 37381947  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||| ||| ||| ||||||| || |||||||||| ||||    
T  37381948 caactatgctatctacaatatgacttgtttgaaatgatt 37381986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 19168936 - 19168831
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||  ||||||||||||||||||||||||||||    
T  19168936 agagcattatccaccatttgtcatgcctaaaaagatgactgattttaagtgggtgttatgagtcaaatttgataccaaagatgagttcaaggaagcaatt 19168837  T
Q  113 accaac 118  Q
    ||||||    
T  19168836 accaac 19168831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 23553069 - 23553205
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||| ||    
T  23553069 cattatccaccatttgtcatgcctaaaaagatgactaattttaagt-ggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaaca 23553167  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  ||| ||| ||||| | || ||||||||||||||||    
T  23553168 attatgctatctacaacatgacttgtttgaaacgattc 23553205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 30141249 - 30141108
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||||    
T  30141249 agagcattatccatcatttgcaatgcctaaaaagatgactaattttaagtgggtgttaagagccagatttgataccaaagatgagttcaatgaagcaatt 30141150  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| |||  |||||| || ||||||||||||||||    
T  30141149 accaactatgctatcaacaataggacttgtttgaaacgattc 30141108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 33693474 - 33693333
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||| | |||||| |||| |||||||||||| ||||||||||||||||||||||  || |||| |||||||||||||||||||||||||||||    
T  33693474 agagcattatctatcatttgccatgtctaaaaagatgaataattttaagtgggtgttaggaatcagatttggtaccaaagatgagttcaaggaagcaatt 33693375  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||| | || ||||||||||||||||    
T  33693374 accaactatgctatctacaacaggacttgtttgaaacgattc 33693333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 50276274 - 50276138
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||| |||| ||||||||||||||   |||||||||||||||||||||||  || |||| |||||||||||||||||||||||||||||||    
T  50276274 agcattatccaccgtttgccatgcctaaaaaga---ctaattttaagtgggtgttaggaatcagatttggtaccaaagatgagttcaaggaagcaattac 50276178  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| ||||||| || ||||||||||||||||    
T  50276177 caactatgctatctacaataggacttgtttgaaacgattc 50276138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 51371188 - 51371047
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||||  | |||| ||||||||||||| |||||||||||||||    
T  51371188 agagcattattcaccatttgccatgtctaaaaaaatgactaattttaagtgggtgttaggagttagatttggtaccaaagatgaattcaaggaagcaatt 51371089  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| |||||||  | ||||||||||||||||    
T  51371088 accaactatgctatctacaatagaacttgtttgaaacgattc 51371047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 25730244 - 25730381
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||| |  |||| || |||||||||||||||||||| |||||||||    
T  25730244 cattatccactatttgctatgcctaaaaagatgactaattttaagtggatgttaggagtcggatttagtgccaaagatgagttcaaggaatcaattacca 25730343  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  25730344 actatgctatctacaatatgacttgtttgaaacgattc 25730381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 31208748 - 31208885
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||| |||||  ||    |||||||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||||    
T  31208748 agagcattatccaccatttatcatgttta----gatgactaattttaagtgggtgttgggagccagatttgataccaaagatgagttcaaggaagcaatt 31208843  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  31208844 accaactatgctatctacaataggacttgtttgaaacgattc 31208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 42549762 - 42549643
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||| |||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||    
T  42549762 agagcattttccacc-tttgtcatgcctaaaaagatgattgattttaagtgggtgttaggagccaaatttagtaccaaagataagttcaatgaagcaatt 42549664  T
Q  113 accaac-atgttatatacaat 132  Q
    |||||| ||||||| ||||||    
T  42549663 accaactatgttatctacaat 42549643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 22298517 - 22298659
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaa-agatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaat 111  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||| ||||  || |||||||||||| |||||| ||||    
T  22298517 agagcattatccaccatttgctatgcctaaaaaagatgactaattttaagtgggtgttaggagccagatttgatatcaaagatgagtttaaggaaacaat 22298616  T
Q  112 taccaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||  ||| ||| ||||||| |  ||||||||||||||||    
T  22298617 taccaattatgctatctacaatagggcttgtttgaaacgattc 22298659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 56555281 - 56555200
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagat 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  56555281 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgtcaggagccagatttggtaccaaagat 56555200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 20534225 - 20534306
Alignment:
Q  73 agccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||| ||| |||  |||||| || ||||||||||||||||    
T  20534225 agccagatttggtaccaaagatgagttcaaagaagcaattaccaactatgctatcaacaataggacttgtttgaaacgattc 20534306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 30141373 - 30141409
Alignment:
Q  219 cttaaaagacctttagatgcatttgacctattcttaa 255  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  30141373 cttaaaggacctttagatgcatttgacctatttttaa 30141409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 7e-53; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 16246334 - 16246193
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  16246334 agagcattatctaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 16246235  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  16246234 accaactatgctatctacaataggacttgtttgaaacgattc 16246193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 27328584 - 27328725
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  27328584 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 27328683  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  27328684 accaactatgctatctacaataggacttgtttgaaacgattc 27328725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 33865408 - 33865267
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  33865408 agagtattatccaccatttgtcatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 33865309  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  33865308 accaactatgttatctacaataagacttgtttgaaacgattc 33865267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 921022 - 921163
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  921022 agagcattatccaccatttgtcatgcataaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 921121  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| ||| ||||||| || ||||||||||||||||    
T  921122 atcaactatgctatctacaataggacttgtttgaaacgattc 921163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 25087933 - 25087796
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||    
T  25087933 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttagtaccagagatgagttcaaggaagcaattatca 25087834  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||||||||||||||| || ||||||||||| ||||    
T  25087833 actatgttatatacaataagacttgtttgaaacaattc 25087796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28650567 - 28650426
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  28650567 agagcattatccaccatttgtcatgtctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagaaatt 28650468  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  28650467 accaactatgctatctacaataggacttgtttgaaacgattc 28650426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 40854609 - 40854750
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||    
T  40854609 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggatgttaggagccagatttgataccaaagatgagttcaaggaagcaatt 40854708  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  40854709 accaactatgctatctacaataggacttgtttgaaacgattc 40854750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 41500643 - 41500502
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  41500643 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagcgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 41500544  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  41500543 accaactatgctatgtacaataggacttgtttgaaacgattc 41500502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 772116 - 771981
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  772116 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 772017  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaa 147  Q
    |||||| ||| ||| ||||||| || ||||||||||    
T  772016 accaactatgctatctacaataggacttgtttgaaa 771981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 7378963 - 7379104
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  7378963 agagcattatccaccatttgtcatgcctaaaaagaggactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 7379062  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||  ||| |||| || || ||||||||||||||||    
T  7379063 accaactattctatctacattatgacttgtttgaaacgattc 7379104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 9276574 - 9276715
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9276574 agagcattatccaccatttgtcatgcataaaaagatagctaattttaagtgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaatt 9276673  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  9276674 accaactatgctatctacaataggacttgtttgaaacgattc 9276715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 11949567 - 11949426
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  11949567 agagcattatccaccatttgtcatgcctaaaaagatgactaatattaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaaacaatt 11949468  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  11949467 accaactatgctatctacaataggacttgtttgaaacgattc 11949426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 33107110 - 33106969
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33107110 agagcattatttaccatttttcatgcctaaaaagatgactaattttaagtgggtgttaggagccatatttggtaccaaagatgagttcaaggaagcaatt 33107011  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || | ||||||||||||||    
T  33107010 accaactatgatatctacaataggactcgtttgaaacgattc 33106969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 34253142 - 34253283
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||    
T  34253142 agagcattatccaccatttgtcatgcctaaaaagatgactaatattaagtgggtgttaggagccagatttgataccaaagatgagttcaagaaagcaatt 34253241  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  34253242 accaactatgctatctacaataggacttgtttgaaacgattc 34253283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 2056929 - 2057067
Alignment:
Q  16 gcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacc 115  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||||||||||||    
T  2056929 gcattatccaccatttaccatgcctaaaaagatgactaattttaagtgggtgttaggagctggatttggtaccaaagatgagttcaaggaagcaattacc 2057028  T
Q  116 aac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||| ||||||| ||||||| || ||||||||||||||||    
T  2057029 aactatgttatctacaataagacttgtttgaaacgattc 2057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 2456010 - 2456151
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||||||||||||||    
T  2456010 agagcattattcaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagttaaatttggtaccaaagatgagttcaaggaagcaatt 2456109  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||| ||||    
T  2456110 accaactatgctatctacaataggacttgtttgaaacaattc 2456151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 12759890 - 12759750
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| |||| ||| ||||||||||||||||||||    
T  12759890 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgtta-gaggcaaatttggtacgaaaaatgagttcaaggaagcaatt 12759792  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  12759791 accaactatgttatctacaataggacttgtttgaaacgattc 12759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 37838301 - 37838438
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||||    
T  37838301 cattatccactatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtatcaaagatgagttcaaagaagcaattacca 37838400  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  37838401 actatgctatctacaataggacttgtttgaaacgattc 37838438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 17134229 - 17134369
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||| |||||| ||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  17134229 agagcattatccatcatttgccattcctaaaaagatgactacttttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 17134328  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| ||||||| || |||||||||||||||    
T  17134329 accaactatgctatctacaataggacttgtttgaaacgatt 17134369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 7297373 - 7297234
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |  |||||||    
T  7297373 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagctagatttggtaccaaagatgagttcaagaagacaattac 7297274  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| ||||||| || ||||||||||||||||    
T  7297273 caactatgctatctacaatatgacttgtttgaaacgattc 7297234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 1106700 - 1106559
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  1106700 agagcattattcaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 1106601  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||  ||| ||| ||||||| || || ||||||| |||||    
T  1106600 accaattatgctatctacaataggacttatttgaaatgattc 1106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 2094551 - 2094410
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| |||| ||| ||||||| |||||||||||||||||    
T  2094551 agagcattatccaccatttgccatgcttaaaaagatgactaattttaagtgggtgtttggagccaaatttagtatcaaagattagttcaaggaagcaatt 2094452  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||||||||||||||||    
T  2094451 accaactatgctatctacaataggacttgtttgaaacgattc 2094410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 8396692 - 8396587
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  8396692 agagcattatccaccatttgtcatgcctaaaaagatgactgattttaagtgggttttaggagccatatttggtaccaaagatgagttcaaggaagcaatt 8396593  T
Q  113 accaac 118  Q
    | ||||    
T  8396592 atcaac 8396587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 19180422 - 19180562
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  19180422 agagtattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgtta-gagccagatttggtaccaaagatgagttcaaggaagcaatt 19180520  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||  ||| ||||||| || ||||||||||||||||    
T  19180521 actaactatactatctacaataagacttgtttgaaacgattc 19180562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 37732334 - 37732193
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||  ||||||| ||||||||||| ||||||||    
T  37732334 agagcattatccaccatttgtcatacataaaaagatgactaattttaagtgggtgttaggagtcagatttgataccaaaaatgagttcaagaaagcaatt 37732235  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||||||| ||||||| || ||||||||||||||||    
T  37732234 accaactatgttatttacaataagacttgtttgaaacgattc 37732193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 36211046 - 36211182
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  36211046 agagcattatccaccatttgccatgcctaaaaagatgactaattttaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaagaagcaatt 36211145  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaac 148  Q
    || ||| ||||||| || |||| || |||||||||||    
T  36211146 acaaactatgttatctagaataggacttgtttgaaac 36211182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 36444369 - 36444229
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  36444369 agagcattatccaccatttgccatgcttaaaaagatgactaattttaagtaggtgttatgagccagatttggtaccaaagatgagttcaaggaagcaatt 36444270  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||| ||| ||| ||| || |||||||||||||||    
T  36444269 accaactatgctatctactataggacttgtttgaaacgatt 36444229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 38751048 - 38751188
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||    
T  38751048 agagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtggatgttaggagccacatttgataccaaagatgagttcaaggaagcaatt 38751147  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgatt 152  Q
    |||||| ||  ||| |||| || || |||||||||||||||    
T  38751148 accaactatactatctacattaggacttgtttgaaacgatt 38751188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 2315114 - 2314975
Alignment:
Q  15 agcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattac 114  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  2315114 agcattatccaccatttaccatgcctaaaaagatgactaattttaagtgagtgttaggagccagatttggtaccaaagatgagttcaaggaaacaattac 2315015  T
Q  115 caac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||| ||| ||| ||||||| || ||||||||||| ||||    
T  2315014 caactatgctatctacaataagacttgtttgaaacaattc 2314975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 3430765 - 3430631
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||||    
T  3430765 agagcattatacaccatttgccatgcctaaaaagatgactaattttaagtgggtgttatgagccagatttggtatcaaagatgagttcaaggaagcaatt 3430666  T
Q  113 accaac-atgttatatacaatacgatttgtttgaa 146  Q
    |||||| ||| ||| ||||||| || |||||||||    
T  3430665 accaactatgctatctacaataggacttgtttgaa 3430631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 8899682 - 8899822
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  8899682 agagcattatccaccatttaccatgcctaaaaagatgactagttttaagtgggtgttaggagccagatttggtaccaaagatgagttcatggaagcaatt 8899781  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||| ||||||| || ||| ||||||||||||    
T  8899782 accaactatgctatctacaatatgacttg-ttgaaacgattc 8899822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 43249553 - 43249448
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||| |||||    
T  43249553 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgtattcaaggaaacaatt 43249454  T
Q  113 accaac 118  Q
    ||||||    
T  43249453 accaac 43249448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 45124120 - 45124260
Alignment:
Q  14 gagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatta 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |  ||||  ||||||||||||||| |||||| ||||||    
T  45124120 gagcattatccaccatttgtcatgcctaaaaagatgattaattttaagtgggtgttaagagtctgatttgataccaaagatgagtttaaggaaacaatta 45124219  T
Q  114 ccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||| ||| ||| ||||||| |||||||||||||||||||    
T  45124220 ccaactatgctatctacaataagatttgtttgaaacgattc 45124260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 17484687 - 17484550
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||| |||||||||||||    
T  17484687 cattatccaccattttccatgcttaaaaagatgactaattttaagtggttgttaggagtcaaatttggtaccaaagatgagttcaaagaagcaattacca 17484588  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  17484587 actatgctatctacaataggacttgtttgaaacgattc 17484550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 29737748 - 29737889
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| || |||| |||||||||||||||||||||||||||||    
T  29737748 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaaatggatcttaggagtcagatttggtaccaaagatgagttcaaggaagcaatt 29737847  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| ||| |||  |||||| || ||||||||||| ||||    
T  29737848 atcaactatgctatcgacaataggacttgtttgaaacaattc 29737889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 41178160 - 41178059
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  41178160 agagcattatccaccatttaccatgcctaaaaaaatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 41178061  T
Q  113 ac 114  Q
    ||    
T  41178060 ac 41178059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 42629962 - 42630103
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||||||||    
T  42629962 agagcatcatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttagaagccagatttggtaccaaagatgagttcaagaaagcaatt 42630061  T
Q  113 accaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||  ||| ||| ||  ||| || ||||||||||||||||    
T  42630062 atcaattatgctatctatgataggacttgtttgaaacgattc 42630103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 37654112 - 37654213
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  37654112 cattattcatcatttgtcatgcctaaaaagatgactgattttaagtggatgttaggagccagatttggtaccaaagatgagttcaaggaagcaattacca 37654211  T
Q  117 ac 118  Q
    ||    
T  37654212 ac 37654213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 19916128 - 19916023
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||| |||||||| |||||||||||||| | || |||||||||||||||||| || |||| ||||||||||||||||||||||| |||||    
T  19916128 agagcattatccacaatttgtcaagcctaaaaagatgattgatattaagtgggtgttaggagtcagatttggtaccaaagatgagttcaaggaaccaatt 19916029  T
Q  113 accaac 118  Q
    ||||||    
T  19916028 accaac 19916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 14630663 - 14630755
Alignment:
Q  62 tgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| || ||||||||||||||||    
T  14630663 tgggtgttaggagccaaatttggtaccaaagatgagttcaaggaagcaattaccaactatgttatctacaatatgacttgtttgaaacgattc 14630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 9331757 - 9331897
Alignment:
Q  14 gagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatta 113  Q
    ||||||||||||||||||||||||| |||||||||  ||||| ||| ||||||||||||||||| |||| ||||| ||||| |  ||  |||||||||||    
T  9331757 gagcattatccaccatttgtcatgcataaaaagatagctaatcttaggtgggtgttaggagccaaatttggtacctaagataatatctgggaagcaatta 9331856  T
Q  114 ccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||| ||  ||| ||||||| || ||||||||||||||||    
T  9331857 ccaacaatactatctacaataggacttgtttgaaacgattc 9331897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 23671901 - 23671811
Alignment:
Q  64 ggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| || |||| || ||||||||||||||||    
T  23671901 ggtgttaggagccagatttagtaccaaagatgagttcaaggaagcaattaccaaccatgttatctataataagacttgtttgaaacgattc 23671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 23673014 - 23672958
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgtt 69  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23673014 agagcattttccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgtt 23672958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 247
Target Start/End: Original strand, 31214113 - 31214141
Alignment:
Q  219 cttaaaagacctttagatgcatttgacct 247  Q
    |||||||||||||||||||||||||||||    
T  31214113 cttaaaagacctttagatgcatttgacct 31214141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 247
Target Start/End: Original strand, 42630169 - 42630197
Alignment:
Q  219 cttaaaagacctttagatgcatttgacct 247  Q
    |||||||||||||||||||||||||||||    
T  42630169 cttaaaagacctttagatgcatttgacct 42630197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 114 - 255
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  114 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccaaagatgagttcaaggaagcaatt 213  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||| || ||| ||| |||| || || ||||||||||||||||    
T  214 accgactatgctatctacattaggacttgtttgaaacgattc 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 218885 - 219027
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagt-gggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaat 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  218885 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtggggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaat 218984  T
Q  112 taccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||||| ||| ||| ||||||| || ||||||||||||||||    
T  218985 taccaactatgctatctacaataggacttgtttgaaacgattc 219027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 5164 - 5027
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  5164 cattatccaccatttgtcatgtctaaaaagatgactaattttaagagggtgttaggagccatatttggtaccaaagatgagttcaagaaaacaattacca 5065  T
Q  117 ac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    || ||| ||| ||||||| || ||||||||||||||||    
T  5064 actatgctatctacaatatgacttgtttgaaacgattc 5027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 47967 - 48103
Alignment:
Q  18 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattaccaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||    
T  47967 attatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggaaccagatttggtaccaaaggtgagttcaaggaagcaattaccaa 48066  T
Q  118 c-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    | |||| |||||||||  || |||||| |||||||||    
T  48067 ctatgtgatatacaatcggacttgtttaaaacgattc 48103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 252579 - 252438
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |||| ||| |||||||||| |||||||||    
T  252579 agagcattatccaccgtttgccatgcctaaaaagatgactaattttaactgggtgttaggagccagatttggtacgaaaaatgagttcaatgaagcaatt 252480  T
Q  113 accaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    |||||| ||| ||||||||||| || ||||||||||||||||    
T  252479 accaactatgctatatacaataggacttgtttgaaacgattc 252438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 5190 - 5326
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||| ||    
T  5190 cattatccaccatttgtcatgcctaaaaagatgactaattttaagt-ggtgttaggagccagatttggtatcaaagatgagttcaaggaagcaattaaca 5288  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  ||| ||| ||||| | || ||||||||||||||||    
T  5289 attatgctatctacaacatgacttgtttgaaacgattc 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 2114 - 2009
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaatt 112  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |||  |||||||||||||||||||||||||||||    
T  2114 agagcattatccaccatttgtcatgcctaataagatgactgattttaagtaggtgttaggagccagattcggtaccaaagatgagttcaaggaagcaatt 2015  T
Q  113 accaac 118  Q
    ||||||    
T  2014 accaac 2009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 11362 - 11463
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||| ||||||||||||||||    
T  11362 cattatccaccatttaccatgcctaaaaagatgactaattttaagtgggtgttaggagccagatttggtaccatagataagtttaaggaagcaattacca 11461  T
Q  117 ac 118  Q
    ||    
T  11462 ac 11463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 13099 - 13236
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||||| | |||||||| | |||| |||||||||||||||||||||||| ||||| ||    
T  13099 cattatccatcatttgccatgcctaaaaagatgaataattttaagtggatattaggagctagatttggtaccaaagatgagttcaaggaaggaattatca 13198  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  ||| ||| ||||||| || ||||||||||||||||    
T  13199 attatgctatctacaatatgacttgtttgaaacgattc 13236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 59745 - 59608
Alignment:
Q  17 cattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggtgttaggagccatattttgtaccaaagatgagttcaaggaagcaattacca 116  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||||| | |||||||| | |||| |||||||||||||||||||||||| ||||| ||    
T  59745 cattatccatcatttgccatgcctaaaaagatgaataattttaagtggatattaggagctagatttggtaccaaagatgagttcaaggaaggaattatca 59646  T
Q  117 a-catgttatatacaatacgatttgtttgaaacgattc 153  Q
    |  ||| ||| ||||||| || ||||||||||||||||    
T  59645 attatgctatctacaatatgacttgtttgaaacgattc 59608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 342 - 289
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtgggt 66  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  342 agagcattatccaccatttgtcatgcctaaaaagatgaataattttaagtgggt 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 19781 - 19831
Alignment:
Q  13 agagcattatccaccatttgtcatgcctaaaaagatgactaattttaagtg 63  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19781 agagcattatccactatttgtcatgcctaaaaagatgactaattttaagtg 19831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 599 - 680
Alignment:
Q  73 agccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||  ||| || || ||||||||||||||||    
T  599 agccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctattaacattaggacttgtttgaaacgattc 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 1994 - 1913
Alignment:
Q  73 agccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| ||| |||  ||| || || ||||||||||||||||    
T  1994 agccagatttggtaccaaagatgagttcaaggaagcaattaccaactatgctattaacattaggacttgtttgaaacgattc 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 3452 - 3407
Alignment:
Q  73 agccatattttgtaccaaagatgagttcaaggaagcaattaccaac 118  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||    
T  3452 agccagatttggtaccaaagatgagttcaaggaagcaattaccaac 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 1877 - 1958
Alignment:
Q  73 agccatattttgtaccaaagatgagttcaaggaagcaattaccaac-atgttatatacaatacgatttgtttgaaacgattc 153  Q
    ||||| |||| |||||||||||||| ||||||||||||||| |||| ||| |||  ||| || || ||||||||||||||||    
T  1877 agccagatttggtaccaaagatgaggtcaaggaagcaattatcaactatgctatcaacattaggacttgtttgaaacgattc 1958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University