View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14475_low_20 (Length: 336)

Name: NF14475_low_20
Description: NF14475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14475_low_20
NF14475_low_20
[»] chr5 (7 HSPs)
chr5 (38-319)||(5784741-5785022)
chr5 (65-278)||(28683054-28683255)
chr5 (41-179)||(13643092-13643230)
chr5 (61-155)||(35341329-35341423)
chr5 (71-199)||(11725206-11725334)
chr5 (71-177)||(21898368-21898474)
chr5 (266-319)||(12852057-12852110)
[»] scaffold0292 (1 HSPs)
scaffold0292 (38-319)||(20759-21040)
[»] chr1 (7 HSPs)
chr1 (60-201)||(13309652-13309793)
chr1 (71-177)||(21808829-21808935)
chr1 (71-201)||(27036320-27036450)
chr1 (41-160)||(23487101-23487220)
chr1 (85-200)||(30731901-30732013)
chr1 (59-207)||(908003-908151)
chr1 (169-205)||(10424162-10424198)
[»] chr2 (6 HSPs)
chr2 (59-199)||(20631641-20631781)
chr2 (59-201)||(29216019-29216161)
chr2 (59-201)||(9892488-9892630)
chr2 (59-201)||(22170428-22170570)
chr2 (59-201)||(17377916-17378058)
chr2 (198-278)||(17678586-17678666)
[»] scaffold0063 (1 HSPs)
scaffold0063 (61-279)||(63142-63360)
[»] scaffold0093 (1 HSPs)
scaffold0093 (72-201)||(11694-11823)
[»] chr3 (7 HSPs)
chr3 (71-200)||(20970556-20970685)
chr3 (65-178)||(11072059-11072172)
chr3 (65-178)||(3580875-3580988)
chr3 (59-201)||(2928948-2929090)
chr3 (198-278)||(3580727-3580807)
chr3 (198-278)||(47166187-47166267)
chr3 (142-178)||(47166336-47166372)
[»] scaffold0238 (4 HSPs)
scaffold0238 (65-201)||(3969-4105)
scaffold0238 (101-178)||(180-257)
scaffold0238 (194-278)||(92-176)
scaffold0238 (198-278)||(4138-4218)
[»] chr6 (8 HSPs)
chr6 (59-199)||(15130163-15130303)
chr6 (65-192)||(8461534-8461661)
chr6 (71-201)||(3547092-3547222)
chr6 (61-155)||(33313820-33313914)
chr6 (61-155)||(18307145-18307239)
chr6 (89-201)||(3056532-3056644)
chr6 (169-205)||(9351487-9351523)
chr6 (79-155)||(9697277-9697353)
[»] chr8 (5 HSPs)
chr8 (59-201)||(21592686-21592828)
chr8 (59-199)||(14412860-14413000)
chr8 (62-160)||(14334975-14335073)
chr8 (119-201)||(23594947-23595028)
chr8 (119-201)||(23603869-23603950)
[»] chr4 (14 HSPs)
chr4 (60-201)||(34511723-34511864)
chr4 (65-192)||(39914144-39914271)
chr4 (65-201)||(7189661-7189792)
chr4 (61-155)||(18233817-18233911)
chr4 (59-201)||(10691879-10692021)
chr4 (59-201)||(10905645-10905787)
chr4 (66-179)||(11485510-11485624)
chr4 (71-177)||(1928922-1929028)
chr4 (62-160)||(17940688-17940786)
chr4 (198-288)||(20380497-20380587)
chr4 (59-200)||(8667397-8667538)
chr4 (41-160)||(31434550-31434669)
chr4 (62-160)||(15441727-15441825)
chr4 (198-278)||(19904930-19905010)
[»] scaffold0363 (1 HSPs)
scaffold0363 (59-199)||(5711-5851)
[»] scaffold0012 (1 HSPs)
scaffold0012 (71-201)||(59984-60114)
[»] chr7 (5 HSPs)
chr7 (62-155)||(22849853-22849946)
chr7 (194-278)||(12727496-12727580)
chr7 (147-198)||(3728093-3728144)
chr7 (125-200)||(9411509-9411584)
chr7 (133-178)||(12727447-12727492)
[»] scaffold0437 (1 HSPs)
scaffold0437 (59-201)||(14628-14770)
[»] scaffold0265 (1 HSPs)
scaffold0265 (71-177)||(23874-23980)
[»] scaffold0007 (1 HSPs)
scaffold0007 (62-160)||(173534-173632)
[»] scaffold0770 (1 HSPs)
scaffold0770 (71-173)||(5944-6046)
[»] scaffold0029 (1 HSPs)
scaffold0029 (71-173)||(104242-104344)
[»] scaffold0281 (1 HSPs)
scaffold0281 (165-201)||(6833-6869)


Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 38 - 319
Target Start/End: Complemental strand, 5785022 - 5784741
Alignment:
Q  38 tccgcagctgaagcaactttcgacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaat 137  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||    
T  5785022 tccgcagctgaagcaactaacgacttcatgcctgttcttacacgaaatcagaaacagaagcttaaggtgcagcacgtccttgcaaaacaaccttctaaat 5784923  T
Q  138 cccatgcacggggtgacaatcaatccattgatcaatgaatttcctatattggaatgttagaggttatttcttcgcatatttttcgtgaaggcaactgctc 237  Q
    ||| ||||||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |     
T  5784922 cccgtgcacggggtgacaagcaatccactaatcaatgagtttcctatattggaatgttagaggttatttcttcgcttatttttcatgaaggcaactgttg 5784823  T
Q  238 cgaggataatttggcttctatggatcactccattgttggtgcgatttggctacatacccttcctagcaatttgagccttgat 319  Q
    || |||||| ||||||||||||| ||| ||||||||||||||| |||||||| || |||||||||||| |||||||||||||    
T  5784822 cgtggataaattggcttctatgggtcattccattgttggtgcggtttggctaaattcccttcctagcattttgagccttgat 5784741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 278
Target Start/End: Complemental strand, 28683255 - 28683054
Alignment:
Q  65 atgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    ||||| ||||||||| ||||||||||  ||||||| ||||| ||||| || ||| ||||  |||||||| |||||| |||||||||||||||| ||||||    
T  28683255 atgccggttcttacaagaaatcagaagcagaaactaaaggtacaacatgttctttcaaagaagccttctcaatcccgtgcacggggtgacaataaatcca 28683156  T
Q  165 ttgatcaatgaatttcctatattggaatgttagaggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatca 264  Q
     |||||||||||||            || ||||||||||||||||| || ||||| |||||||| ||| ||| ||  ||||  || |||||||||| |||    
T  28683155 ctgatcaatgaatt------------atattagaggttatttcttcccacattttccgtgaaggaaacagctgcgcagataggttcgcttctatgggtca 28683068  T
Q  265 ctccattgttggtg 278  Q
    ||||| ||||||||    
T  28683067 ctccagtgttggtg 28683054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 13643230 - 13643092
Alignment:
Q  41 gcagctgaagcaactttcgacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatccc 140  Q
    |||||||||||||||   |  |||||||| ||||||||||||| ||||||| | || |||||||| |||||| || |  |||| ||||| || |||||||    
T  13643230 gcagctgaagcaactgatggtttcatgcctgttcttacacgaagtcagaaacaaaagcttaaggtacaacacatcttatcaaagcagccatccaaatccc 13643131  T
Q  141 atgcacggggtgacaatcaatccattgatcaatgaattt 179  Q
     |||||||||||||| ||||||   || |||||||||||    
T  13643130 gtgcacggggtgacattcaatcgtctgctcaatgaattt 13643092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 35341329 - 35341423
Alignment:
Q  61 cttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgaca 155  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||  |  | || |||||||| || |||| |||||||| |||||    
T  35341329 cttcatgcctgttcttacacgaaatcagaaacaaaaacttaaggtacaacacgttttatccaagcagccttccaagtcccgtgcacgggatgaca 35341423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 11725206 - 11725334
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||| |||| |||||| |||||||||| ||  |||| ||  | |||| |||| |||||||| ||| ||| ||||||||  |||  || | | |||    
T  11725206 gttcttacaagaaaacagaaacagaaacttaaagttaaacaagttttagcaacacagtcttctaaaacccgtgctcggggtgaacatctctcgacttatc 11725305  T
Q  171 aatgaatttcctatattggaatgttagag 199  Q
    |||||||||||| ||||||||||||||||    
T  11725306 aatgaatttcctctattggaatgttagag 11725334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 21898474 - 21898368
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||  |  ||| |||| |||||| | ||||||| ||  |||||||||||  | ||||||||||    
T  21898474 gttcttacacgcaatcaaaaacagaaaattaaggtgcaacgggcactttcaaagcagcctcccaaatcccgtgtgcggggtgacaacaattccattgatc 21898375  T
Q  171 aatgaat 177  Q
    |||||||    
T  21898374 aatgaat 21898368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 319
Target Start/End: Complemental strand, 12852110 - 12852057
Alignment:
Q  266 tccattgttggtgcgatttggctacatacccttcctagcaatttgagccttgat 319  Q
    ||||||||||||| | |||||||| || |||||||||||| |||||||||||||    
T  12852110 tccattgttggtggggtttggctaaattcccttcctagcattttgagccttgat 12852057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 38 - 319
Target Start/End: Original strand, 20759 - 21040
Alignment:
Q  38 tccgcagctgaagcaactttcgacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaat 137  Q
    |||||| |||||||||||  |||||||||||| ||||||||||||||||| ||| |||| ||||||||| | ||||||||||||||||| ||||||||||    
T  20759 tccgcaactgaagcaactaacgacttcatgcctgttcttacacgaaatcaaaaacagaagcttaaggtgtagcacgtccttgcaaaacaaccttctaaat 20858  T
Q  138 cccatgcacggggtgacaatcaatccattgatcaatgaatttcctatattggaatgttagaggttatttcttcgcatatttttcgtgaaggcaactgctc 237  Q
    ||| |||||| | |||||| ||||||| | || ||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  |     
T  20859 cccgtgcacgagttgacaagcaatccactaataaatgagtttcctatattggaatgttagaggttatttcttcacttatttttcgtgaaggcaactcttg 20958  T
Q  238 cgaggataatttggcttctatggatcactccattgttggtgcgatttggctacatacccttcctagcaatttgagccttgat 319  Q
    || |||||| ||||||||||||| ||| || |||||||||| | |||||||| || |||||||||||| ||||||| |||||    
T  20959 cgcggataaattggcttctatgggtcattctattgttggtggggtttggctaaattcccttcctagcattttgagctttgat 21040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 60 - 201
Target Start/End: Complemental strand, 13309793 - 13309652
Alignment:
Q  60 acttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatca 159  Q
    |||||||||| ||||||||| ||| |||||||   || |||||||| ||||| |||||| |||| |||||| | || |||| ||||||||||||||||||    
T  13309793 acttcatgcctgttcttacaagaagtcagaaacttaagcttaaggttcaacatgtcctttcaaagcagcctacaaagtcccgtgcacggggtgacaatca 13309694  T
Q  160 atccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    ||||| |||||| ||||| |||| ||||||||||||||||||    
T  13309693 atccactgatcactgaatatcctctattggaatgttagaggt 13309652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 21808829 - 21808935
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||| || ||| |||| |||||| | ||||||| ||  |||||||||||  | ||||||||||    
T  21808829 gttcttacacgcaatcaaaaacagaaaattaaggtgcaacaggtactttcaaagcagcctcccaaatcccgtgtgcggggtgacaacaattccattgatc 21808928  T
Q  171 aatgaat 177  Q
    |||||||    
T  21808929 aatgaat 21808935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 27036450 - 27036320
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||| ||| |||| || ||| ||||||| ||||| ||||| ||| | |||||  |||||  |||||| | ||| |||||||||||||| || | |||||    
T  27036450 gttctaacaagaaaacataaacagaaactcaaggtacaacaagtcttagcaaagtagcctaataaatctcgtgctcggggtgacaatcattcgactgatc 27036351  T
Q  171 aatgaatttcctatattggaatgttagaggt 201  Q
     ||||||||||| ||||||||||||||||||    
T  27036350 gatgaatttcctctattggaatgttagaggt 27036320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 23487101 - 23487220
Alignment:
Q  41 gcagctgaagcaactttcgacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatccc 140  Q
    |||||||||||||||   |  ||||||||  |||||||||||| ||||||| |||| |||||||| |||||| || |  |||| ||||| || |||||||    
T  23487101 gcagctgaagcaactgatggtttcatgcctattcttacacgaagtcagaaacagaagcttaaggtacaacacatcttatcaaagcagccatccaaatccc 23487200  T
Q  141 atgcacggggtgacaatcaa 160  Q
     |||||||||||||| ||||    
T  23487201 gtgcacggggtgacactcaa 23487220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 30731901 - 30732013
Alignment:
Q  85 tcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatcaatgaatttcctat 184  Q
    ||||||| | || |||||||| |||||||| ||  |||  |||||||| || |||| | ||||||||||||||||||||| ||  |||||||||   |||    
T  30731901 tcagaaacaaaagcttaaggttcaacacgttctctcaatgcagccttcaaagtcccgttcacggggtgacaatcaatccactgcccaatgaatt---tat 30731997  T
Q  185 attggaatgttagagg 200  Q
    ||||||||||||||||    
T  30731998 attggaatgttagagg 30732013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 207
Target Start/End: Complemental strand, 908151 - 908003
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| || |||||| | || |||||  | ||||||||  ||||||| ||  |  ||||||||||||||||| ||| ||| ||||||||||| |    
T  908151 gacttcatgccggtacttacaaggaagcagaagcaaaaacttaaattgcaacaagtattgccaaaacagccttctaaaacccctgctcggggtgacaagc 908052  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggttatttc 207  Q
    |  |   || | |||||||||||| ||||||||||||||||||| ||||    
T  908051 acactcctgcttaatgaatttcctctattggaatgttagaggttgtttc 908003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 10424198 - 10424162
Alignment:
Q  169 tcaatgaatttcctatattggaatgttagaggttatt 205  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  10424198 tcaatgaatttcctctattggaatgtgagaggttatt 10424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 20631641 - 20631781
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||| ||| |||| |||||| ||||||| ||||| ||||| ||| | ||||| ||||||  |||||||| | | |||||||||||||    
T  20631641 gacttcatgcctgttctaacaagaaaacagaaatagaaactcaaggtacaacaagtcttagcaaagcagcctaataaatcccgtacccggggtgacaatc 20631740  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagag 199  Q
    | || | ||||||||||||||||| ||||||||||||||||    
T  20631741 attcgagtgatcaatgaatttcctctattggaatgttagag 20631781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 29216019 - 29216161
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||| ||| |||| |||||| ||||||| | ||| ||||| ||| | ||||| |||||| ||||||||| ||| | |||||||||||    
T  29216019 gacttcatgcctgttctaacaagaaaacagaaacagaaactcagggtacaacaagtcttagcaaagcagcctactaaatcccgtgccctgggtgacaatc 29216118  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    | || | ||||||||||| || || |||| |||||||||||||    
T  29216119 attcgactgatcaatgaaatttctctattagaatgttagaggt 29216161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 9892630 - 9892488
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||| ||||| ||||| ||| |||| |||||| | ||||| ||||| || || ||| | ||||| ||||||  |||||||| ||  | |||||||||||    
T  9892630 gactttatgcctgttctaacaagaaaacagaaacaaaaactcaaggtacagcaagtcttagcaaagcagcctattaaatcccgtgtccagggtgacaatc 9892531  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    | || | ||||||||||||||||| ||||||||||||||||||    
T  9892530 attcgactgatcaatgaatttcctctattggaatgttagaggt 9892488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 22170570 - 22170428
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||| ||| |||| |||||| ||||||| ||||| ||||| ||| | ||||| ||||||  |||||| | |||    ||||||||||    
T  22170570 gacttcatgcctgttctaacaagaaaacagaaacagaaactcaaggttcaacaagtcttagcaaagcagcctaataaatctcgtgcctttggtgacaatc 22170471  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    | || | |||||| |||||||||| ||||||||||||||||||    
T  22170470 attcgagtgatcagtgaatttcctctattggaatgttagaggt 22170428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 17378058 - 17377916
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||| ||| || |||||| | || |||||| | ||| ||||  ||||||| ||| | ||||| |||||| | ||| ||| ||| |||||||||||||    
T  17378058 gacttcacgccagtccttacaaggaagcagaaacaaaaaattaaattgcaacaagtcttggcaaagcagcctcccaaaacccgtgctcggggtgacaatc 17377959  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    |  | | || |||||||||||||| ||||||||||||||||||    
T  17377958 atacgactgctcaatgaatttcctctattggaatgttagaggt 17377916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 17678666 - 17678586
Alignment:
Q  198 aggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtg 278  Q
    ||||||||||||| |  ||||||||||||||  || ||| ||  ||||| ||||||||||||| |||||||| ||||||||    
T  17678666 aggttatttcttcccgcatttttcgtgaaggatacagctgcgtagataagttggcttctatgggtcactccagtgttggtg 17678586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 61 - 279
Target Start/End: Original strand, 63142 - 63360
Alignment:
Q  61 cttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaa 160  Q
    ||||||||| ||||| ||| |||| || ||| | ||||||||||| ||||| ||| | ||||| |||||| ||||||||| ||| || |||||||||||     
T  63142 cttcatgcctgttctaacaagaaaacataaacaaaaacttaaggtacaacaagtcttagcaaagcagcctactaaatcccgtgcccgaggtgacaatcat 63241  T
Q  161 tccattgatcaatgaatttcctatattggaatgttagaggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatgg 260  Q
    |  | | ||||||||||||| | |||||||||||||||||||| |||||| |||||||  | |||||| ||||| |  | |||||| || |||  |||||    
T  63242 ttgactaatcaatgaatttcatctattggaatgttagaggttacttcttctcatatttaccatgaagggaactgttgtgcggataagttagctattatgg 63341  T
Q  261 atcactccattgttggtgc 279  Q
     || |||||| ||||||||    
T  63342 gtctctccatggttggtgc 63360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 201
Target Start/End: Original strand, 11694 - 11823
Alignment:
Q  72 ttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatca 171  Q
    |||||||| ||||||| ||| ||||| ||||||||||||| |||||| |||| |||||| ||||||||| ||||||| ||||||||   |||| ||||||    
T  11694 ttcttacaagaaatcaaaaacagaaaattaaggtgcaacaagtcctttcaaagcagcctactaaatcccgtgcacggagtgacaatatctccagtgatca 11793  T
Q  172 atgaatttcctatattggaatgttagaggt 201  Q
    |||||| | || | ||||||||||||||||    
T  11794 atgaatattcttttttggaatgttagaggt 11823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 20970685 - 20970556
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||| ||||||||||  ||||||| ||||| ||||| || ||| ||||  ||||||||||| ||| |||||||||||||||| |||||| |||||    
T  20970685 gttcttacaagaaatcagaagcagaaactgaaggtccaacatgttctttcaaagaagccttctaaaacccgtgcacggggtgacaataaatccactgatc 20970586  T
Q  171 aatgaatttcctatattggaatgttagagg 200  Q
    ||||||||  || ||||||||| |||||||    
T  20970585 aatgaattgtctctattggaatattagagg 20970556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 11072059 - 11072172
Alignment:
Q  65 atgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    ||||| ||||||||| ||||||||||  ||||||| ||||| ||||| || ||| ||||  ||||||||||||||| || ||||||||| ||| ||||||    
T  11072059 atgccggttcttacaagaaatcagaagcagaaactgaaggtacaacatgttctttcaaagaagccttctaaatcccgtgtacggggtgataataaatcca 11072158  T
Q  165 ttgatcaatgaatt 178  Q
     |||||||||||||    
T  11072159 ctgatcaatgaatt 11072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 178
Target Start/End: Complemental strand, 3580988 - 3580875
Alignment:
Q  65 atgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    ||||| ||||||||| ||||||||||  ||||||| | ||| |||||  | ||| ||||  ||||||||||| ||| |||||||||||||||| ||||||    
T  3580988 atgccggttcttacaagaaatcagaagcagaaactgagggtccaacatattctttcaaagaagccttctaaaccccgtgcacggggtgacaataaatcca 3580889  T
Q  165 ttgatcaatgaatt 178  Q
     | |||||||||||    
T  3580888 ctaatcaatgaatt 3580875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 2929090 - 2928948
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||| ||| |||||||||   || |||||| ||||| ||||  ||||||| ||| | || || |||||| ||||| | | ||| |||||||||||||    
T  2929090 gacttcacgccggttcttacaaagaagcagaaacagaaaattaaattgcaacaagtcttggctaagcagcctcctaaaacacgtgctcggggtgacaatc 2928991  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    |  | | || | |||||||||||| ||||||||||||||||||    
T  2928990 atacgactgcttaatgaatttcctctattggaatgttagaggt 2928948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 3580807 - 3580727
Alignment:
Q  198 aggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtg 278  Q
    ||||||||||||| || |||||||||||||| ||| ||| ||   |||  ||||||||||||| |||||||| ||||||||    
T  3580807 aggttatttcttcccacatttttcgtgaaggaaacagctgcgcatataggttggcttctatgggtcactccagtgttggtg 3580727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 47166267 - 47166187
Alignment:
Q  198 aggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtg 278  Q
    ||||||||||||| || |||||||||||||| ||| ||| ||   |||  ||||||||||||| ||||| || ||||||||    
T  47166267 aggttatttcttcccacatttttcgtgaaggaaacagctgcgcatatatgttggcttctatgggtcactgcagtgttggtg 47166187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 47166372 - 47166336
Alignment:
Q  142 tgcacggggtgacaatcaatccattgatcaatgaatt 178  Q
    |||||||||||||||| |||||| |||||||||||||    
T  47166372 tgcacggggtgacaataaatccactgatcaatgaatt 47166336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 57; Significance: 9e-24; HSPs: 4)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 201
Target Start/End: Original strand, 3969 - 4105
Alignment:
Q  65 atgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    ||||| ||||||||| ||||||| ||  ||||||| ||||| ||||| || ||| ||||  ||||||||||||| | |||||||||||||||| ||||||    
T  3969 atgccggttcttacaagaaatcaaaagcagaaactgaaggtccaacatgttctttcaaagaagccttctaaatctcgtgcacggggtgacaataaatcca 4068  T
Q  165 ttgatcaatgaatttcctatattggaatgttagaggt 201  Q
     |||||||||||||  || ||||||||| ||||||||    
T  4069 ctgatcaatgaattgtctctattggaatattagaggt 4105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 257 - 180
Alignment:
Q  101 aaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatcaatgaatt 178  Q
    ||||| ||||| || ||| ||||  ||||||||||||| | |||||| ||||||||| ||||||||||||||||||||    
T  257 aaggtacaacatgttctttcaaagtagccttctaaatctcgtgcacgtggtgacaataaatccattgatcaatgaatt 180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 176 - 92
Alignment:
Q  194 ttagaggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtg 278  Q
    ||||||||||||||||| || ||||| | |||||| ||| ||| ||  ||||  || |||||||||| |||||||| ||||||||    
T  176 ttagaggttatttcttcccacattttccatgaaggaaacagctgcgcagataggttcgcttctatgggtcactccagtgttggtg 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 4138 - 4218
Alignment:
Q  198 aggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtg 278  Q
    |||||||||||||||| ||||| |||||||| ||| | | ||  ||||  ||| ||||||||| |||||||| ||||||||    
T  4138 aggttatttcttcgcacattttccgtgaaggaaacagttgcgtagataggttgacttctatgggtcactccagtgttggtg 4218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 15130303 - 15130163
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||| ||| |||| |||||| | ||||| ||||| ||||| ||| | ||||| ||||||  |||||||| | | |||||||||||||    
T  15130303 gacttcatgcctgttctaacaagaaaacagaaacataaactcaaggtacaacaagtcttagcaaagcagcctaataaatcccgtacccggggtgacaatc 15130204  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagag 199  Q
    | || | ||||||||||||||||| ||||||||||||||||    
T  15130203 attcgagtgatcaatgaatttcctctattggaatgttagag 15130163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 8461534 - 8461661
Alignment:
Q  65 atgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    ||||| ||||||||| ||||||||||  ||||||| ||||| ||||| || ||| ||||  |||||||||||||   |||||||||||||||| ||||||    
T  8461534 atgccggttcttacaagaaatcagaagcagaaactgaaggtccaacatgttctttcaaagaagccttctaaatcttgtgcacggggtgacaataaatcca 8461633  T
Q  165 ttgatcaatgaatttcctatattggaat 192  Q
     |||||||||||||  || |||||||||    
T  8461634 ctgatcaatgaattgtctctattggaat 8461661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 3547222 - 3547092
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||| ||||||||||  | ||||| ||||| ||||| || ||| ||||  ||||||||||||||| |||||||||||||||| |||||  |||||    
T  3547222 gttcttacaagaaatcagaagcaaaaactgaaggtccaacatgttctttcaaagaagccttctaaatcccgtgcacggggtgacaataaatcctctgatc 3547123  T
Q  171 aatgaatttcctatattggaatgttagaggt 201  Q
    ||||||||  || ||||||||| ||| ||||    
T  3547122 aatgaattgtctctattggaatattaaaggt 3547092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 33313820 - 33313914
Alignment:
Q  61 cttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgaca 155  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||  |  | || |||||||| ||||||| ||||||||||||||    
T  33313820 cttcatgcctgttcttacacgaaatcagaaacaaaaacttaaggtacaacacgttttatccaagcagccttccaaatcccgtgcacggggtgaca 33313914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 18307239 - 18307145
Alignment:
Q  61 cttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgaca 155  Q
    ||||||||  ||||||||||||||||||||| | ||||||||||| ||||||||  |  | || |||||||| ||||||| ||||||||||||||    
T  18307239 cttcatgcttgttcttacacgaaatcagaaacaaaaacttaaggtacaacacgttttatccaagcagccttccaaatcccgtgcacggggtgaca 18307145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 3056532 - 3056644
Alignment:
Q  89 aaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatcaatgaatttcctatattg 188  Q
    ||||| ||| |||| || ||||| ||| | ||||| |||||| ||||| ||| ||| ||||||||||||||  | | || |||||||||||||| |||||    
T  3056532 aaaaaaaaaattaaagttcaacaagtcttggcaaagcagcctcctaaaacccgtgctcggggtgacaatcatacgactgctcaatgaatttcctctattg 3056631  T
Q  189 gaatgttagaggt 201  Q
    |||||||||||||    
T  3056632 gaatgttagaggt 3056644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 9351523 - 9351487
Alignment:
Q  169 tcaatgaatttcctatattggaatgttagaggttatt 205  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9351523 tcaatgaatttcttatattggaatgttagaggttatt 9351487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 9697353 - 9697277
Alignment:
Q  79 acgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgaca 155  Q
    ||||||||||||| | ||||||||||| ||||||||  |  | || |||||||| ||||||| |||||| |||||||    
T  9697353 acgaaatcagaaacaaaaacttaaggtacaacacgttttatccaagcagccttccaaatcccgtgcacgaggtgaca 9697277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 21592686 - 21592828
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||| ||| |||| |||||| ||||||| ||||| ||||| ||| | | ||| ||||||  |||||| | ||| |||||||||||||    
T  21592686 gacttcatgcctgttctaacaagaaaacagaaacagaaactcaaggtacaacaagtcttagtaaagcagcctaataaatctcgtgcccggggtgacaatc 21592785  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    | |  | ||||||||||||||||| ||||||||||||||||||    
T  21592786 atttgagtgatcaatgaatttcctctattggaatgttagaggt 21592828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 14412860 - 14413000
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||  ||||| ||| |||| |||||| | ||||| ||||| ||||| ||| | ||||| ||||||  |||||||| | | |||||||||||||    
T  14412860 gacttcatgcatgttctaacaagaaaacagaaacaaaaactcaaggtacaacaagtcttagcaaagcagcctaataaatcccgtacccggggtgacaatc 14412959  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagag 199  Q
    | || | ||||||||||||||||| ||||||||||||||||    
T  14412960 attcgagtgatcaatgaatttcctgtattggaatgttagag 14413000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 14334975 - 14335073
Alignment:
Q  62 ttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaa 160  Q
    |||||||| ||||||||||||| ||||||| |||| |||||||| |||||| || |  |||| ||||| || ||||||| |||||||||||||| ||||    
T  14334975 ttcatgcctgttcttacacgaagtcagaaacagaagcttaaggtacaacacatcttatcaaagcagccatccaaatcccgtgcacggggtgacactcaa 14335073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 23594947 - 23595028
Alignment:
Q  119 gcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    ||||| ||||||  |||||||| ||| |||||||||||||| || | |||||| ||||||||||||| |||||||||||||||    
T  23594947 gcaaagcagcctagtaaatcccgtgcccggggtgacaatcattcgactgatca-tgaatttcctataatggaatgttagaggt 23595028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 23603869 - 23603950
Alignment:
Q  119 gcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    ||||| ||||||  |||||||| ||| |||||||||||||| || | |||||| ||||||||||||| |||||||||||||||    
T  23603869 gcaaagcagcctagtaaatcccgtgcccggggtgacaatcattcgactgatca-tgaatttcctataatggaatgttagaggt 23603950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 34511723 - 34511864
Alignment:
Q  60 acttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatca 159  Q
    |||||||||| ||||||||| ||  ||||||| |||| |||||||| ||||| |||||| |||| |||||| | || | |  ||||||||||||||||||    
T  34511723 acttcatgcctgttcttacaagaggtcagaaatagaagcttaaggttcaacatgtcctttcaaagcagcctacaaagttctgtgcacggggtgacaatca 34511822  T
Q  160 atccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
    ||||| | | || ||||| |||| ||||||||||||||||||    
T  34511823 atccactaaccactgaatgtcctctattggaatgttagaggt 34511864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 39914271 - 39914144
Alignment:
Q  65 atgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    ||||| ||||||||| ||||||||||  ||||||| ||||| ||||| || ||| ||||  |||||||||||||   |||||||||||||||| ||||||    
T  39914271 atgccggttcttacaagaaatcagaagcagaaactgaaggtccaacatgttctttcaaagaagccttctaaatcttgtgcacggggtgacaataaatcca 39914172  T
Q  165 ttgatcaatgaatttcctatattggaat 192  Q
     |||||||||||||  || |||||||||    
T  39914171 ctgatcaatgaattgtctctattggaat 39914144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 201
Target Start/End: Original strand, 7189661 - 7189792
Alignment:
Q  65 atgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    ||||| ||||||||| ||||||||||  ||||||| ||||| |||||     || ||||  ||||||||||||||| ||||||| |||||||| ||||||    
T  7189661 atgccggttcttacaagaaatcagaagcagaaactgaaggtccaaca-----tttcaaagaagccttctaaatcccgtgcacggagtgacaataaatcca 7189755  T
Q  165 ttgatcaatgaatttcctatattggaatgttagaggt 201  Q
     |||||||||||||  || ||||||||| ||||||||    
T  7189756 ctgatcaatgaattgtctctattggaatattagaggt 7189792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 18233817 - 18233911
Alignment:
Q  61 cttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgaca 155  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||  |  | || |||||||| ||||||| | ||||||||||||    
T  18233817 cttcatgcctgttcttacacgaaatcagaaacaaaaacttaaggtacaacacgttttatccaagcagccttccaaatcccgttcacggggtgaca 18233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 10692021 - 10691879
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||||||| |||| || ||| |||||||||| || ||||| ||  | ||||  || ||||||||| |   ||| ||||||||  |||    
T  10692021 gacttcatgccggttcttacaagaaaacataaacagaaacttaaagttcaacaagttttagcaacgcatccttctaaaacttgtgctcggggtgaacatc 10691922  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
      || | ||||||||||||||||| ||||||||||||||||||    
T  10691921 tctcgactgatcaatgaatttcctctattggaatgttagaggt 10691879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 10905787 - 10905645
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||||||| |||| || ||| |||||||||| || ||||| ||  | ||||  || ||||||||| |   ||| ||||||||  |||    
T  10905787 gacttcatgccggttcttacaagaaaacataaacagaaacttaaagttcaacaagttttagcaacgcatccttctaaaacttgtgctcggggtgaacatc 10905688  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
      || | ||||||||||||||||| ||||||||||||||||||    
T  10905687 tctcgactgatcaatgaatttcctctattggaatgttagaggt 10905645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 11485624 - 11485510
Alignment:
Q  66 tgcccgttcttacacgaaatcagaaaaagaaa-cttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatcca 164  Q
    |||| ||||||||| ||| ||||||||| ||| |||||||| |||||||| ||  |||| |||||| | || |||| | |||||||||||||||||||||    
T  11485624 tgcctgttcttacaagaagtcagaaaaaaaaagcttaaggttcaacacgttctctcaaagcagcctccaaagtcccgttcacggggtgacaatcaatcca 11485525  T
Q  165 ttgatcaatgaattt 179  Q
     ||  ||||||||||    
T  11485524 ctgcccaatgaattt 11485510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 1929028 - 1928922
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||||| ||||| ||| | ||| ||||||||||||| || ||| |||| |||||| | ||||||| ||  |||||||||||  | ||| ||||||    
T  1929028 gttcttacacgcaatcaaaaacataaaattaaggtgcaacaggtactttcaaagcagcctcccaaatcccgtgtgcggggtgacaacaactcctttgatc 1928929  T
Q  171 aatgaat 177  Q
    |||||||    
T  1928928 aatgaat 1928922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 17940688 - 17940786
Alignment:
Q  62 ttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaa 160  Q
    |||||||| ||||||||||||| ||||||| | || |||||||| |||||| || |  |||| ||||| || ||||||| || ||||||||||| ||||    
T  17940688 ttcatgcctgttcttacacgaagtcagaaacataagcttaaggtacaacacatcttatcaaagcagccatccaaatcccgtgtacggggtgacactcaa 17940786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 20380587 - 20380497
Alignment:
Q  198 aggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtgcgatttggct 288  Q
    ||||||||||||| |||||||  |||||||||||||| | || |||||| ||||||  | ||  ||||||||| ||||||||| |||||||    
T  20380587 aggttatttcttctcatatttaccgtgaaggcaactgttgcgcggataaattggctaatttgtgtcactccatggttggtgcggtttggct 20380497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 8667538 - 8667397
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||| ||| || |||||| | || || ||| ||||| |||| || ||||| ||| | ||||| || ||| ||||| | | ||| |||||||||||||    
T  8667538 gacttcacgccggtccttacaaggaagcaaaaacagaaaattaaagttcaacaagtcttggcaaagcaacctcctaaaactcgtgctcggggtgacaatc 8667439  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagagg 200  Q
    |  | | || |||||||||||||| |||||||||||||||||    
T  8667438 atacaactgctcaatgaatttcctctattggaatgttagagg 8667397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 31434669 - 31434550
Alignment:
Q  41 gcagctgaagcaactttcgacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatccc 140  Q
    |||||||||||||||   |  |||||||| ||||||||||||||||||||| | || |||||||| ||| || || |  ||||  |||| || ||||| |    
T  31434669 gcagctgaagcaactgatggtttcatgcctgttcttacacgaaatcagaaacataagcttaaggtacaatacatcttatcaaagaagccatccaaatctc 31434570  T
Q  141 atgcacggggtgacaatcaa 160  Q
     |||||||||||||| ||||    
T  31434569 gtgcacggggtgacactcaa 31434550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 15441825 - 15441727
Alignment:
Q  62 ttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaa 160  Q
    |||||||| ||||||||| ||| ||||||| ||||  ||||||| |||||| || |  ||||  |||| || ||||||| |||||||||||||| ||||    
T  15441825 ttcatgcctgttcttacatgaagtcagaaacagaagtttaaggtacaacacatcttatcaaagaagccatccaaatcccgtgcacggggtgacactcaa 15441727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 19905010 - 19904930
Alignment:
Q  198 aggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtg 278  Q
    ||||||||||||| ||| |||| |||||||| |||||||  | |||||| ||||||||| |||  ||||| ||| ||||||    
T  19905010 aggttatttcttctcatgttttccgtgaaggaaactgctgtgcggataaattggcttctttggggcactcaattattggtg 19904930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 5851 - 5711
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||  ||||| ||| |||| |||||| | ||||| ||||| ||||| ||| | ||||| ||||||  |||||||| | | |||||||||||||    
T  5851 gacttcatgcatgttctaacaagaaaacagaaacaaaaactcaaggtacaacaagtcttagcaaagcagcctaataaatcccgtacccggggtgacaatc 5752  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagag 199  Q
    | || | ||||||||||||||||| ||||||||||||||||    
T  5751 attcgagtgatcaatgaatttcctgtattggaatgttagag 5711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 60114 - 59984
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||| ||||||| ||  ||||| ||||||||||||| || ||| |||| |||||| ||||||||| ||| |||||||||||  | ||||||||||    
T  60114 gttcttacaagaaatcaaaagcagaaaattaaggtgcaacaggtactttcaaagcagcctcctaaatcccgtgcgcggggtgacaacaactccattgatc 60015  T
Q  171 aatgaatttcctatattggaatgttagaggt 201  Q
    ||||||| | || | |||||||||| |||||    
T  60014 aatgaatattctcttttggaatgttcgaggt 59984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 22849946 - 22849853
Alignment:
Q  62 ttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgaca 155  Q
    |||||||| ||||||||||||||||||||| | ||||||||||| ||||||||  |  | || |||||||| ||||||| ||||||||||||||    
T  22849946 ttcatgcctgttcttacacgaaatcagaaacaaaaacttaaggtacaacacgttttatccaagcagccttccaaatcccgtgcacggggtgaca 22849853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 12727496 - 12727580
Alignment:
Q  194 ttagaggttatttcttcgcatatttttcgtgaaggcaactgctccgaggataatttggcttctatggatcactccattgttggtg 278  Q
    ||||||||||||||||| || ||||| |||||||| ||| ||| ||  ||||  || |||||||||| |||||||| ||||||||    
T  12727496 ttagaggttatttcttcccacattttccgtgaaggaaacagctgcgcagataggttcgcttctatgggtcactccagtgttggtg 12727580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 3728144 - 3728093
Alignment:
Q  147 ggggtgacaatcaatccattgatcaatgaatttcctatattggaatgttaga 198  Q
    ||||||||||||| |  | ||||||||||||||||| |||||||||||||||    
T  3728144 ggggtgacaatcatttgactgatcaatgaatttcctctattggaatgttaga 3728093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 9411584 - 9411509
Alignment:
Q  125 cagccttctaaatcccatgcacggggtgacaatcaatccattgatcaatgaatttcctatattggaatgttagagg 200  Q
    |||||| ||||| | | ||| ||||||||||||||  | | || |||||||||||||| |||||||||||||||||    
T  9411584 cagcctcctaaaactcgtgctcggggtgacaatcatacaactgctcaatgaatttcctctattggaatgttagagg 9411509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 12727447 - 12727492
Alignment:
Q  133 taaatcccatgcacggggtgacaatcaatccattgatcaatgaatt 178  Q
    |||||| | |||||||||||||||| |||||| |||||||||||||    
T  12727447 taaatctcgtgcacggggtgacaataaatccactgatcaatgaatt 12727492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0437
Description:

Target: scaffold0437; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 14770 - 14628
Alignment:
Q  59 gacttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatc 158  Q
    ||||||||||| ||||| ||| |||| |||||| ||||||| ||||| ||||| ||| | ||||| ||||||  |||||| | |||    ||||||||||    
T  14770 gacttcatgcctgttctaacaagaaaacagaaacagaaactcaaggttcaacaagtcttagcaaagcagcctattaaatctcgtgcctttggtgacaatc 14671  T
Q  159 aatccattgatcaatgaatttcctatattggaatgttagaggt 201  Q
      || | |||||| |||||||||| ||||||||||||||||||    
T  14670 tttcgagtgatcattgaatttcctctattggaatgttagaggt 14628  T

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Target: scaffold0265 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 23980 - 23874
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||| || ||| |||| |||||| | ||||||| ||  |||||||||||  | ||||||||||    
T  23980 gttcttacacgcaatcaaaaacagaaaattaaggtgcaacaggtactttcaaagcagcctcccaaatcccgtgtgcggggtgacaacaattccattgatc 23881  T
Q  171 aatgaat 177  Q
    |||||||    
T  23880 aatgaat 23874  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 173534 - 173632
Alignment:
Q  62 ttcatgcccgttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaa 160  Q
    |||||||| ||||||||||||||||||||| | || |||||||| |||||| || |  |||| ||||| || ||||||| |||||||||||||| ||||    
T  173534 ttcatgcctgttcttacacgaaatcagaaacaaaagcttaaggtacaacacatcttatcaaagcagccatccaaatcccgtgcacggggtgacactcaa 173632  T

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Target: scaffold0770 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 5944 - 6046
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||||| ||||| ||| ||||| |||||||||| || || ||| |||| |||||| | ||||||| ||  |||||||||||  ||||||||||||    
T  5944 gttcttacacgcaatcaaaaacagaaaattaaggtgcagcaggtactttcaaagcagcctcccaaatcccgtgtgcggggtgacaacaaatccattgatc 6043  T
Q  171 aat 173  Q
    |||    
T  6044 aat 6046  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 104242 - 104344
Alignment:
Q  71 gttcttacacgaaatcagaaaaagaaacttaaggtgcaacacgtccttgcaaaacagccttctaaatcccatgcacggggtgacaatcaatccattgatc 170  Q
    ||||||||||| ||||| ||| ||||| |||||||||| || || ||| |||| |||||| | ||||||| ||  |||||||||||  ||||||||||||    
T  104242 gttcttacacgcaatcaaaaacagaaaattaaggtgcagcaggtactttcaaagcagcctcccaaatcccgtgtgcggggtgacaacaaatccattgatc 104341  T
Q  171 aat 173  Q
    |||    
T  104342 aat 104344  T

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Target: scaffold0281 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 6833 - 6869
Alignment:
Q  165 ttgatcaatgaatttcctatattggaatgttagaggt 201  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  6833 ttgatcaatgaatatcctttattggaatgttagaggt 6869  T

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