View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14475_low_28 (Length: 266)

Name: NF14475_low_28
Description: NF14475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14475_low_28
NF14475_low_28
[»] chr7 (22 HSPs)
chr7 (1-259)||(39499727-39499984)
chr7 (87-253)||(41894376-41894541)
chr7 (3-69)||(26459420-26459486)
chr7 (3-69)||(43215184-43215250)
chr7 (2-69)||(25021344-25021411)
chr7 (165-223)||(39102737-39102793)
chr7 (3-69)||(22760863-22760929)
chr7 (15-69)||(25655250-25655304)
chr7 (3-69)||(48771938-48772004)
chr7 (3-75)||(23552112-23552184)
chr7 (21-69)||(42836029-42836077)
chr7 (7-71)||(45976937-45977001)
chr7 (23-70)||(22932741-22932788)
chr7 (3-69)||(7801180-7801246)
chr7 (3-69)||(17041022-17041088)
chr7 (15-69)||(20335853-20335907)
chr7 (3-69)||(39631844-39631910)
chr7 (167-226)||(1324796-1324853)
chr7 (167-226)||(19236027-19236084)
chr7 (167-226)||(28663843-28663900)
chr7 (5-69)||(30442488-30442552)
chr7 (1-65)||(42711962-42712026)
[»] chr3 (18 HSPs)
chr3 (77-254)||(4818008-4818184)
chr3 (15-70)||(4222140-4222195)
chr3 (15-69)||(16354914-16354968)
chr3 (3-70)||(37051304-37051371)
chr3 (3-66)||(53412948-53413011)
chr3 (3-69)||(14186648-14186713)
chr3 (167-250)||(26517177-26517259)
chr3 (3-69)||(27093371-27093437)
chr3 (3-69)||(28703414-28703480)
chr3 (3-69)||(40063619-40063685)
chr3 (15-69)||(46518628-46518682)
chr3 (21-62)||(17554778-17554819)
chr3 (167-226)||(14645851-14645908)
chr3 (167-226)||(20945262-20945319)
chr3 (37-69)||(24478155-24478187)
chr3 (167-226)||(30476128-30476185)
chr3 (167-226)||(48309531-48309588)
chr3 (167-226)||(50363114-50363171)
[»] chr1 (19 HSPs)
chr1 (103-259)||(45102426-45102577)
chr1 (15-69)||(9165217-9165271)
chr1 (15-69)||(25297772-25297826)
chr1 (5-71)||(31794276-31794342)
chr1 (5-69)||(11063556-11063620)
chr1 (5-69)||(36371470-36371534)
chr1 (3-66)||(15786330-15786393)
chr1 (3-70)||(37400273-37400340)
chr1 (15-69)||(1094525-1094579)
chr1 (3-69)||(1690087-1690153)
chr1 (3-69)||(10526823-10526889)
chr1 (3-69)||(19528337-19528403)
chr1 (174-226)||(8984627-8984677)
chr1 (167-226)||(5085048-5085105)
chr1 (1-65)||(17745264-17745328)
chr1 (5-68)||(18459243-18459307)
chr1 (167-226)||(23982551-23982608)
chr1 (3-67)||(33700783-33700847)
chr1 (167-226)||(46732919-46732976)
[»] chr8 (17 HSPs)
chr8 (165-259)||(3624738-3624832)
chr8 (3-67)||(3624582-3624646)
chr8 (2-69)||(8484999-8485066)
chr8 (3-69)||(19703497-19703563)
chr8 (3-67)||(2203494-2203558)
chr8 (1-69)||(28783060-28783128)
chr8 (15-69)||(16852340-16852394)
chr8 (165-213)||(7727308-7727356)
chr8 (22-70)||(18540297-18540345)
chr8 (165-207)||(2237592-2237634)
chr8 (109-151)||(3624538-3624579)
chr8 (15-69)||(20994480-20994534)
chr8 (3-69)||(44780124-44780190)
chr8 (1-69)||(18897166-18897234)
chr8 (29-69)||(23874418-23874458)
chr8 (167-226)||(24512128-24512185)
chr8 (167-226)||(45203846-45203903)
[»] chr5 (13 HSPs)
chr5 (169-252)||(38550654-38550736)
chr5 (3-69)||(30883208-30883274)
chr5 (3-69)||(21549147-21549213)
chr5 (5-69)||(34984806-34984870)
chr5 (3-69)||(30109318-30109384)
chr5 (15-69)||(22737082-22737136)
chr5 (3-69)||(25627057-25627123)
chr5 (1-70)||(16457809-16457878)
chr5 (1-65)||(16436622-16436685)
chr5 (15-71)||(16773805-16773861)
chr5 (23-75)||(17155818-17155870)
chr5 (167-226)||(29866277-29866334)
chr5 (167-226)||(35568964-35569021)
[»] chr2 (22 HSPs)
chr2 (119-237)||(6444459-6444576)
chr2 (107-152)||(3922133-3922178)
chr2 (3-71)||(42327405-42327473)
chr2 (4-69)||(19322768-19322833)
chr2 (3-69)||(12994386-12994452)
chr2 (3-61)||(21213777-21213835)
chr2 (3-69)||(29503271-29503337)
chr2 (3-69)||(34041598-34041664)
chr2 (3-69)||(37480075-37480141)
chr2 (16-69)||(42602554-42602607)
chr2 (167-226)||(7255689-7255746)
chr2 (15-71)||(42922412-42922468)
chr2 (167-214)||(32677573-32677620)
chr2 (15-69)||(1729816-1729870)
chr2 (3-69)||(11251087-11251153)
chr2 (15-69)||(19244109-19244163)
chr2 (167-224)||(28733913-28733968)
chr2 (3-69)||(40416400-40416466)
chr2 (167-226)||(13534493-13534550)
chr2 (1-69)||(29197384-29197452)
chr2 (2-66)||(30359657-30359721)
chr2 (16-68)||(37755994-37756046)
[»] chr4 (12 HSPs)
chr4 (3-70)||(13901741-13901808)
chr4 (3-69)||(37109361-37109427)
chr4 (3-69)||(1730499-1730565)
chr4 (3-69)||(31759668-31759734)
chr4 (4-69)||(13496241-13496306)
chr4 (15-66)||(7292820-7292871)
chr4 (103-157)||(31893545-31893599)
chr4 (15-69)||(46545711-46545765)
chr4 (167-226)||(20185616-20185673)
chr4 (21-69)||(27965538-27965586)
chr4 (5-69)||(33619206-33619270)
chr4 (167-226)||(52226107-52226164)
[»] scaffold0258 (1 HSPs)
scaffold0258 (15-69)||(15345-15399)
[»] chr6 (7 HSPs)
chr6 (15-69)||(12188325-12188379)
chr6 (15-69)||(33549104-33549158)
chr6 (167-226)||(3887903-3887961)
chr6 (167-226)||(28238274-28238332)
chr6 (3-69)||(30127400-30127466)
chr6 (15-69)||(31623013-31623067)
chr6 (167-226)||(30248950-30249007)
[»] scaffold1091 (1 HSPs)
scaffold1091 (167-226)||(1873-1930)
[»] scaffold0517 (1 HSPs)
scaffold0517 (3-70)||(7736-7803)
[»] scaffold0038 (1 HSPs)
scaffold0038 (167-226)||(38436-38494)
[»] scaffold0013 (1 HSPs)
scaffold0013 (167-226)||(49224-49282)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-66)||(94981-95044)
[»] scaffold0178 (1 HSPs)
scaffold0178 (15-69)||(6656-6710)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-62)||(43340-43401)
[»] scaffold0056 (1 HSPs)
scaffold0056 (4-69)||(61659-61724)
[»] scaffold0221 (1 HSPs)
scaffold0221 (3-71)||(2919-2987)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 39499727 - 39499984
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttccctccatccctagttataagcatccattga 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  39499727 catgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggttccctccatccctagttataagcatccattga 39499826  T
Q  101 ggaaaaaatttgtccctaaatataacatctctttcaattttctagatgcattaattannnnnnnccaaacataaccctagttaatactactaatttctct 200  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  39499827 gaaaaaaatttgt-cctaaatataacatctctttcaattttctagatgcattaattatttttttccaaacataaccctagttaatactactaatttctct 39499925  T
Q  201 tggaatatgaaaaaagtcaaatttaaatacactacaaataaggacaatttagtattatc 259  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39499926 tggaatatgaaaaaagtcaaatttgaatacactacaaataaggacaatttagtattatc 39499984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 41894376 - 41894541
Alignment:
Q  87 taagcatccattgaggaaaaaatttgtccctaaatataacatctctttcaattttctagatgcattaattannnnnnnccaaacataaccctagttaata 186  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||       |  |||||||| ||| ||||||    
T  41894376 taagcacccattgagaaaaaaatttgtccctaaatataacctctctttcaattttttagatgcatttattacttttttcttaacataactctaattaata 41894475  T
Q  187 ctactaatttctcttggaatatgaaaaaagtcaaatttaaatacactacaaataaggacaatttagt 253  Q
    ||||||||||  ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  41894476 ctactaatttaccttggaatatgaaaa-agtcaaatttgaatacactacaaacaaggacaatttagt 41894541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 26459420 - 26459486
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  26459420 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43215250 - 43215184
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| |||||||  |||||| ||||||||||||||| |||||||||||||||||    
T  43215250 tgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 25021344 - 25021411
Alignment:
Q  2 atgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| || | ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  25021344 atgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 39102737 - 39102793
Alignment:
Q  165 ccaaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatt 223  Q
    ||||||||||||||| ||||||||||||| || |||||||||||  |||||||||||||    
T  39102737 ccaaacataaccctaattaatactactaacttgtcttggaatat--aaaaagtcaaatt 39102793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22760929 - 22760863
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| ||| ||||||||| | |||||||||||||||||    
T  22760929 tgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 25655250 - 25655304
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||||    
T  25655250 gaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtt 25655304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 48772004 - 48771938
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||||| || ||||| ||||||| ||| ||| ||||||||||||| || ||||||||||||||||    
T  48772004 tgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 23552184 - 23552112
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttccctcc 75  Q
    ||||||||| | ||||| ||||||| ||||||| ||| ||||| |||||  |||||||||||||||| |||||    
T  23552184 tgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtttcctcc 23552112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 42836029 - 42836077
Alignment:
Q  21 cacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  42836029 cacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 45976937 - 45977001
Alignment:
Q  7 accttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttcc 71  Q
    ||||||| ||||| ||||||| ||||||  |||||||||||||||  ||||||||||||| ||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtggattcc 45977001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 22932741 - 22932788
Alignment:
Q  23 cactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    ||||| ||||||| ||||||||||||| | ||||||||||||||||||    
T  22932741 cactcccaggtcccaagccaataccaccataccaacccaagtgggttc 22932788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 7801246 - 7801180
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| ||||||| ||||||| ||||||| ||| ||||||||| |  |||| |||||||||||    
T  7801246 tgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17041022 - 17041088
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||  ||| ||| |||||||| |||||| |||||||||||||||||    
T  17041022 tgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 20335853 - 20335907
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| || |||| ||||||||||| ||| |||||||||||||||||    
T  20335853 gaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 39631910 - 39631844
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| |  |||| ||||||| |||||||||||||||  ||||||||||||||||    
T  39631910 tgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 1324853 - 1324796
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  1324853 aaacatacccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaatttaa 1324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 19236027 - 19236084
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| |||||||||||  ||||||||||    
T  19236027 aaacatacccctaattaatactactaacttgtcttgaaatatgaaaaa--tcaaatttaa 19236084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 28663900 - 28663843
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| |||||||||||||||| ||||| ||||||  | |||||||||||||    
T  28663900 aaacatacccctaattaatactactaatttatcttgaaatatg--agaagtcaaatttaa 28663843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 30442552 - 30442488
Alignment:
Q  5 agaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| | ||||| || |||| ||||||| ||||||||||||||   ||||||||||||||||    
T  30442552 agaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42712026 - 42711962
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtg 65  Q
    ||||||||||| | ||||| ||||||| || || | |||| ||||||||||| ||||||||||||    
T  42712026 catgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaacccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 77 - 254
Target Start/End: Complemental strand, 4818184 - 4818008
Alignment:
Q  77 tccctagttataagcatccattgaggaaaaaattt-gtccctaaatataacatctctttcaattttctagatgcattaattannnnnnnccaaacataac 175  Q
    |||||||||||||||||| |||||| ||||  ||| |||| |||||||||| ||||||||||||||||| || ||||| |||       || ||||||||    
T  4818184 tccctagttataagcatctattgagaaaaattttttgtccttaaatataacctctctttcaattttctaaatacatta-ttatttttttcctaacataac 4818086  T
Q  176 cctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaaatacactacaaataaggacaatttagta 254  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  4818085 cctaattaatactactaatttatcttggaatat-aaaaaagtcaaatttgaatacactacaaacaaggacaatttagta 4818008  T

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Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 4222195 - 4222140
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    ||||| ||||||| ||| ||| |||||||||||||||| |||||||||||||||||    
T  4222195 gaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggttc 4222140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 16354914 - 16354968
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||||||||| | |||||||||||||||  ||||||||||||||||    
T  16354914 gaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 37051304 - 37051371
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    |||||| |||| ||||||||||||| ||| ||| ||  ||||| ||||||| ||||||||||||||||    
T  37051304 tgagactttaaggaggaacacactcccagatcccaaatcaatatcactaaatcaacccaagtgggttc 37051371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 53413011 - 53412948
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgg 66  Q
    ||||||||| | ||||| ||||||| |||||   ||||||||||||||| ||||||||||||||    
T  53413011 tgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14186713 - 14186648
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| ||| |||||||||||  ||||||||||||||||    
T  14186713 tgagaccttgaggaggagcacactc-caggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 26517177 - 26517259
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaaatacac-tacaaat-aaggacaattt 250  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  ||||||||||||| ||||||| ||||||| |||||||||||    
T  26517177 aaacatacccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaattt-aatacacatacaaataaaggacaattt 26517259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 27093371 - 27093437
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| || || | |||||||||||||||  ||||||||||||||||    
T  27093371 tgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 28703414 - 28703480
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| ||||||| ||||||| ||| ||| |||| |||| ||||  |||||||||||||||||    
T  28703414 tgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 40063685 - 40063619
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||||| ||||| || |||| ||| ||| |||||||||| |||||  |||||||||||||||    
T  40063685 tgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 46518682 - 46518628
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||| ||| |||||||||||||||  ||||||||||||||||    
T  46518682 gaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 17554819 - 17554778
Alignment:
Q  21 cacactcacaggtcctaagccaataccactaaaccaacccaa 62  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||    
T  17554819 cacactcccaggtcccaagccaataccaccaaaccaacccaa 17554778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 14645851 - 14645908
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||||||||||||||||| || ||||| ||| |||||||  ||||||||||    
T  14645851 aaacatacccctagttaatactactaacttgtcttgaaatttgaaaaa--tcaaatttaa 14645908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 20945262 - 20945319
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||||||||| ||||||||||||| || ||||  ||||||  |||||||||||||||    
T  20945262 aaacataaccctaattaatactactaacttgtcttaaaatatg--aaaagtcaaatttaa 20945319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 24478187 - 24478155
Alignment:
Q  37 aagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||||||| |||||||||||||||||||    
T  24478187 aagccaataccaccaaaccaacccaagtgggtt 24478155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 30476185 - 30476128
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||  |||||||| ||||||  |||||||||||||||    
T  30476185 aaacatacccctaattaatactactatcttctcttgaaatatg--aaaagtcaaatttaa 30476128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 48309588 - 48309531
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  48309588 aaacatacccctaattaatactactaacttatcttgaaatatg--aaaagtcaaatttaa 48309531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 50363171 - 50363114
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  50363171 aaacatacccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaatttaa 50363114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 259
Target Start/End: Complemental strand, 45102577 - 45102426
Alignment:
Q  103 aaaaaatttgtccctaaatataacatctctttcaattttctagatgcattaattannnnnnnccaaacataaccctagttaatactactaatttctcttg 202  Q
    |||||| |||||  |||||||||| ||||||||||||||||| ||||||| ||||       ||||| ||||| ||| |||||||||||||||| |||||    
T  45102577 aaaaaaattgtctttaaatataacttctctttcaattttctaaatgcatttattattt----ccaaaaataactctaattaatactactaatttatcttg 45102482  T
Q  203 gaatatgaaaaaagtcaaatttaaatacactacaaataaggacaatttagtattatc 259  Q
    ||||||||||||| |||||||| ||||||||| ||| ||||||||||| ||| ||||    
T  45102481 gaatatgaaaaaa-tcaaattttaatacactataaacaaggacaatttcgtaatatc 45102426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 9165217 - 9165271
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  9165217 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 25297826 - 25297772
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||| ||||||| ||||||||||| |||||||||||||||||    
T  25297826 gaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 31794276 - 31794342
Alignment:
Q  5 agaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttcc 71  Q
    ||||||| | ||||| ||||||| || |||| |||||||||||||||  ||||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggttcc 31794342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 11063620 - 11063556
Alignment:
Q  5 agaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| | ||||||||||||  ||||||| ||||||||||||||| | |||||||| ||||||    
T  11063620 agaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaaatgggtt 11063556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 36371534 - 36371470
Alignment:
Q  5 agaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| | ||||| ||||||| ||||| | |||||||||||||||  ||||||||||||||||    
T  36371534 agaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 15786330 - 15786393
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgg 66  Q
    ||||||||| | ||||| ||||||| ||| ||| |||||||||| |||| ||||||||||||||    
T  15786330 tgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 37400340 - 37400273
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    ||||||||||| ||||| ||||||  ||||||  ||||||||||||| | |||||||||||| |||||    
T  37400340 tgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggttc 37400273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 1094579 - 1094525
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||||||||| | ||| ||||||||  |||||||||||||||||||    
T  1094579 gaggagcacactcacaggttccaagtcaataccaacaaaccaacccaagtgggtt 1094525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1690087 - 1690153
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||||| || |||||||| |||| ||||||| ||||||||||||| | |||||  ||||||||||    
T  1690087 tgagacctcaaggaggaacagactcccaggtcccaagccaataccaccagaccaattcaagtgggtt 1690153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 10526889 - 10526823
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| || |||| ||||||| ||||||||||||||  |||||||||| ||||||    
T  10526889 tgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 19528337 - 19528403
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| |||||||| || ||| ||||||||||||| |  ||||||||||||||||    
T  19528337 tgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 8984627 - 8984677
Alignment:
Q  174 accctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    |||||| |||||||||||||||| ||||| ||||||  |||||||||||||||    
T  8984627 accctaattaatactactaatttatcttgaaatatg--aaaagtcaaatttaa 8984677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 5085048 - 5085105
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||  |||||||| ||||||  |||||||||||||||    
T  5085048 aaacatacccctaattaatactactatcttctcttgaaatatg--aaaagtcaaatttaa 5085105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17745264 - 17745328
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtg 65  Q
    ||||||||||  | ||||| ||||| | ||||||| |||||||||||||||  ||||||||||||    
T  17745264 catgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 18459243 - 18459307
Alignment:
Q  5 agaccttaaagaggaacacactcacaggtcctaagccaat-accactaaaccaacccaagtgggt 68  Q
    |||||| || ||||| ||||||| || |||| |||||||| ||||||| ||||||||||||||||    
T  18459243 agacctcaaggaggagcacactcccaagtcccaagccaattaccactagaccaacccaagtgggt 18459307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 23982551 - 23982608
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  23982551 aaacatatccctaattaatactactaacttatcttgaaatatg--aaaagtcaaatttaa 23982608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 33700783 - 33700847
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtggg 67  Q
    ||||||||| | ||||| ||||||| ||| | | |||||||||||||||  ||||||||||||||    
T  33700783 tgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 46732919 - 46732976
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  46732919 aaacatacccctaattattactactaatttgtcttgaaatatg--aaaagtcaaatttaa 46732976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 3624738 - 3624832
Alignment:
Q  165 ccaaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaaatacactacaaataaggac-aatttagtattatc 259  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||| ||||    
T  3624738 ccaaacataaccctaattaatactactaatttaccttggaatatg-aaaaagtcaaatttgaatacactacaaacaaggacaaatttagtaatatc 3624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 3624646 - 3624582
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtggg 67  Q
    ||||||||| ||||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||    
T  3624646 tgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 8485066 - 8484999
Alignment:
Q  2 atgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||| |  ||||||||||||||||    
T  8485066 atgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 19703497 - 19703563
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  19703497 tgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 2203558 - 2203494
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtggg 67  Q
    ||||||||| | ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||    
T  2203558 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28783128 - 28783060
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||||| | ||||| ||||||| ||||||  ||||||||||||| || ||||||||||||||||    
T  28783128 catgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 16852394 - 16852340
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  16852394 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 7727308 - 7727356
Alignment:
Q  165 ccaaacataaccctagttaatactactaatttctcttggaatatgaaaa 213  Q
    ||||| ||||||||| ||||||||||||| || ||||||||||||||||    
T  7727308 ccaaatataaccctaattaatactactaacttgtcttggaatatgaaaa 7727356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 18540345 - 18540297
Alignment:
Q  22 acactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    |||||| ||||||| |||||||||||||||  |||||||||||||||||    
T  18540345 acactcccaggtcccaagccaataccactaggccaacccaagtgggttc 18540297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 2237634 - 2237592
Alignment:
Q  165 ccaaacataaccctagttaatactactaatttctcttggaata 207  Q
    ||||||||||||||| ||||||||||||| || ||||||||||    
T  2237634 ccaaacataaccctaattaatactactaacttatcttggaata 2237592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 3624538 - 3624579
Alignment:
Q  109 tttgtccctaaatataacatctctttcaattttctagatgcat 151  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  3624538 tttgtccctaaatataacctct-tttcaattttctagatgcat 3624579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 20994480 - 20994534
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| ||| |||||||||||  ||||||||||||||||    
T  20994480 gaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 44780124 - 44780190
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| || |||| |||||||| ||||||  ||||||||||||||||    
T  44780124 tgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18897234 - 18897166
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||||| | ||||| |||||||  |||||| || |||| |||||||  ||||||||||||||||    
T  18897234 catgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 23874418 - 23874458
Alignment:
Q  29 caggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  23874418 caggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 24512128 - 24512185
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| |||||||||||| ||| ||||| ||||||  |||||||||||||||    
T  24512128 aaacatacccctaattaatactactattttatcttgaaatatg--aaaagtcaaatttaa 24512185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 45203903 - 45203846
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  45203903 aaacatacccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaatttaa 45203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 38550736 - 38550654
Alignment:
Q  169 acataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaaatacactacaaataaggacaatttag 252  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| || ||||||||||||| ||||||||||||||||||||    
T  38550736 acataaccctaattaatactactaatttaccttggaatatgaaaaa-gttaaatttaaatacaatacaaataaggacaatttag 38550654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 30883208 - 30883274
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  30883208 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 21549147 - 21549213
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||| |||| ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  21549147 tgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 34984870 - 34984806
Alignment:
Q  5 agaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| | ||||| ||||||| ||||| | ||||||||||||||| |||||||||||||||||    
T  34984870 agaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 30109318 - 30109384
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||||| || ||||| ||||||| ||||||  ||||||||||||| || ||||||||||||||||    
T  30109318 tgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 22737136 - 22737082
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||  || |||| ||||||||||||||| |||||||||||||||||    
T  22737136 gaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 25627123 - 25627057
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| || || | |||||||||||||||  ||||||||||||||||    
T  25627123 tgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16457878 - 16457809
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    ||||||||||| | ||||| |||||||  |||||| ||||||||||||| |  |||||| ||||||||||    
T  16457878 catgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggttc 16457809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16436685 - 16436622
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtg 65  Q
    ||||||||||| | ||||| ||||||| || |||| |||||||||||||||  ||||||||||||    
T  16436685 catgagaccttgaggaggagcacactc-caagtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 16773861 - 16773805
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttcc 71  Q
    ||||| ||||||| ||||||| ||| ||||||||| | |||||| ||||||||||||    
T  16773861 gaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggttcc 16773805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 17155870 - 17155818
Alignment:
Q  23 cactcacaggtcctaagccaataccactaaaccaacccaagtgggttccctcc 75  Q
    ||||| ||||||| || ||||||||||||||||||||||| || ||| |||||    
T  17155870 cactctcaggtcccaaaccaataccactaaaccaacccaaatgagttacctcc 17155818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 29866334 - 29866277
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  29866334 aaacatacccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaatttaa 29866277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 35568964 - 35569021
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  35568964 aaacatacccctaattagtactactaatttgtcttgaaatatg--aaaagtcaaatttaa 35569021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 6444459 - 6444576
Alignment:
Q  119 aatataacatctctttcaattttctagatgcattaattannnnnnnccaaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtc 218  Q
    |||||||| ||||||||||||||||||||||||| ||||        |||||||||||||| ||||||||||||||||  ||| ||||||||||||| ||    
T  6444459 aatataacctctctttcaattttctagatgcatttattattttttttcaaacataaccctaattaatactactaatttaccttagaatatgaaaaaa-tc 6444557  T
Q  219 aaatttaaatacactacaa 237  Q
    |||||| || |||||||||    
T  6444558 aaatttgaaaacactacaa 6444576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 3922178 - 3922133
Alignment:
Q  107 aatttgtccctaaatataacatctctttcaattttctagatgcatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3922178 aatttgtccctaaatataacatctctttcaattttctagatgcatt 3922133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 42327405 - 42327473
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttcc 71  Q
    ||||||||| | ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||||    
T  42327405 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttcc 42327473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 19322833 - 19322768
Alignment:
Q  4 gagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||||| ||||||| ||||||| ||||||| || |||||||||||| | |||||||||||||||    
T  19322833 gagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggtt 19322768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 12994386 - 12994452
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||||| ||||| ||||||| ||||||| ||| ||||||||||| |||||| |||| |||||    
T  12994386 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtt 12994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 21213835 - 21213777
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaaccca 61  Q
    |||||||| || ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  21213835 tgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 29503337 - 29503271
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| || ||||||||||||  ||||||||||||||||    
T  29503337 tgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 34041598 - 34041664
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||| ||||||| |||||||||||  ||||||||||||||||    
T  34041598 tgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 37480141 - 37480075
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| ||||||||||||| |  ||||||||||||||||    
T  37480141 tgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 42602607 - 42602554
Alignment:
Q  16 aggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  42602607 aggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 7255746 - 7255689
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| |||||||||||||||| ||||| ||||||  |||||||||||||||    
T  7255746 aaacatatccctaattaatactactaatttgtcttgaaatatg--aaaagtcaaatttaa 7255689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 42922468 - 42922412
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttcc 71  Q
    ||||| ||||||| ||||| | |||||||||||||||  ||||||||||||||||||    
T  42922468 gaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttcc 42922412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 32677620 - 32677573
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaa 214  Q
    ||||||| ||||| |||||||||||||||| ||||| |||||||||||    
T  32677620 aaacatacccctaattaatactactaatttgtcttgaaatatgaaaaa 32677573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 1729870 - 1729816
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| || |||| |||||||||||||||  ||||||||||||||||    
T  1729870 gaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 11251153 - 11251087
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||  || |||| |||||||||||||||| |||||| |||||||||    
T  11251153 tgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 19244163 - 19244109
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| ||| |||||||| || |||||||||||||||||    
T  19244163 gaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 28733968 - 28733913
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaattt 224  Q
    ||||||| ||||| |||||||||||||||| ||||| |||||  ||||||||||||||    
T  28733968 aaacatacccctaattaatactactaatttatcttgaaatat--aaaaagtcaaattt 28733913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 40416400 - 40416466
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||||| ||||| || |||| ||||| | ||| |||||||||||  ||||||||||||||||    
T  40416400 tgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 13534550 - 13534493
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  13534550 aaacatatccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaatttaa 13534493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29197384 - 29197452
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||||| | || ||||| ||||||| || |||| ||| ||||||||| || ||||||||||||||||    
T  29197384 catgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 30359721 - 30359657
Alignment:
Q  2 atgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgg 66  Q
    |||||||||| | ||||| |||||||  |||||| ||||||| ||||| || |||||||||||||    
T  30359721 atgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 37755994 - 37756046
Alignment:
Q  16 aggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggt 68  Q
    |||| |||| || ||||||| ||||||||||||| || |||||||||||||||    
T  37755994 aggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 13901808 - 13901741
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    |||||||| || ||||||||||||| ||||||  ||||||||||||||| ||||||||||||| ||||    
T  13901808 tgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtgagttc 13901741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 37109361 - 37109427
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  37109361 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1730499 - 1730565
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||| || ||||||| ||||||| ||||||| |||||||||||||||   |||||||||||||||    
T  1730499 tgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 31759668 - 31759734
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||| | ||||| ||||||| || |||| ||||||||||||||| | |||||||||||||||    
T  31759668 tgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 13496306 - 13496241
Alignment:
Q  4 gagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||||  |||||||||||||||||| |||| ||| ||||||||| |  ||||||||||||||||    
T  13496306 gagacctcgaagaggaacacactcacatgtcccaagtcaataccaccatgccaacccaagtgggtt 13496241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 7292820 - 7292871
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgg 66  Q
    ||||| ||||||| ||||| | ||||||||||||||| ||||||||||||||    
T  7292820 gaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 31893599 - 31893545
Alignment:
Q  103 aaaaaatttgtccctaaatataacatctctttcaattttctagatgcattaatta 157  Q
    ||||||||||||||||||||||| |||   | |||||||||||||||||| ||||    
T  31893599 aaaaaatttgtccctaaatataagatcatctacaattttctagatgcattgatta 31893545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 46545765 - 46545711
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||  |||||||||||||||  ||||||||||||||||    
T  46545765 gaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 20185616 - 20185673
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| || || |||||||||||||||| ||||| ||||||  |||||||||||||||    
T  20185616 aaacatacccttaattaatactactaatttgtcttgaaatatg--aaaagtcaaatttaa 20185673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 27965538 - 27965586
Alignment:
Q  21 cacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||| ||| ||| |||||||||||||||  ||||||||||||||||    
T  27965538 cacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 33619270 - 33619206
Alignment:
Q  5 agaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    |||||| || ||||| ||| ||| ||| ||||||||||||||||| ||  |||||||||||||||    
T  33619270 agacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 52226164 - 52226107
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  52226164 aaacatacccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaatttaa 52226107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 15345 - 15399
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  15345 gaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 12188325 - 12188379
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  12188325 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 33549158 - 33549104
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  33549158 gaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 3887903 - 3887961
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| |||||||||||| ||||||||||    
T  3887903 aaacatacccctaattaatactactaacttgtcttgaaatatgaaaaaa-tcaaatttaa 3887961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 28238274 - 28238332
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| |||||| ||||||||||||||||    
T  28238274 aaacatacccctaattaatactactaacttgtcttgaaatatg-aaaaagtcaaatttaa 28238332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 30127466 - 30127400
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||  ||||||| ||||||| |||  || ||||||||||||| | |||||||||||||||||    
T  30127466 tgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 31623013 - 31623067
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||| ||||||| ||||||| |||||||||||||   |||||||||||||||||    
T  31623013 gaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 30249007 - 30248950
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| ||||||  |||||||||||||||    
T  30249007 aaacatacccctaattaatactactaacttgtcttgaaatatg--aaaagtcaaatttaa 30248950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 1873 - 1930
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| |||||||||||||||| ||||| ||||||  |||||||||||||||    
T  1873 aaacatacccctaattaatactactaatttgtcttgcaatatg--aaaagtcaaatttaa 1930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 7736 - 7803
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttc 70  Q
    ||||||||||| ||||| ||||||  ||||||  ||||||||||||| | |||||||||||| |||||    
T  7736 tgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggttc 7803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 38436 - 38494
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| ||||||||||||| || ||||| |||||| ||||||||||||||||    
T  38436 aaacatacccctaattaatactactaacttgtcttgaaatatg-aaaaagtcaaatttaa 38494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 49282 - 49224
Alignment:
Q  167 aaacataaccctagttaatactactaatttctcttggaatatgaaaaaagtcaaatttaa 226  Q
    ||||||| ||||| |||||||||||||||| | ||| ||||||| |||||||||||||||    
T  49282 aaacatacccctaattaatactactaatttgttttgaaatatga-aaaagtcaaatttaa 49224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 94981 - 95044
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgg 66  Q
    ||||||||| | ||||| ||||||| ||||| | |||||||||||||||  |||||||||||||    
T  94981 tgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 6656 - 6710
Alignment:
Q  15 gaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
    ||||||||||||| || ||||||| |||||||||||| | ||||| |||||||||    
T  6656 gaggaacacactcccaagtcctaaaccaataccactagatcaacctaagtgggtt 6710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43340 - 43401
Alignment:
Q  1 catgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaa 62  Q
    |||||||||||||  |||||||||||| || |||| ||||||||||||| |  |||||||||    
T  43340 catgagaccttaagaaggaacacactcccaagtcccaagccaataccaccatgccaacccaa 43401  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 61659 - 61724
Alignment:
Q  4 gagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggtt 69  Q
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T  61659 gagactttaaggaggaccatactcccaggtcccaagccaataccactagatcaacccatgtgggtt 61724  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 2919 - 2987
Alignment:
Q  3 tgagaccttaaagaggaacacactcacaggtcctaagccaataccactaaaccaacccaagtgggttcc 71  Q
    ||||||||||| ||||| ||||||   |||||| || |||| ||||| || ||||||||||||||||||    
T  2919 tgagaccttaaggaggatcacacttcaaggtcccaaaccaaaaccaccaagccaacccaagtgggttcc 2987  T

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