View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14475_low_36 (Length: 232)

Name: NF14475_low_36
Description: NF14475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14475_low_36
NF14475_low_36
[»] chr8 (21 HSPs)
chr8 (170-232)||(34494647-34494708)
chr8 (170-232)||(295546-295608)
chr8 (170-232)||(9048325-9048386)
chr8 (170-232)||(9738702-9738763)
chr8 (170-232)||(22767133-22767194)
chr8 (170-232)||(25830254-25830316)
chr8 (170-228)||(31806300-31806357)
chr8 (170-232)||(35818938-35818999)
chr8 (170-232)||(45405992-45406054)
chr8 (170-230)||(5359339-5359398)
chr8 (170-230)||(7795315-7795375)
chr8 (170-230)||(44711979-44712038)
chr8 (170-229)||(67172-67231)
chr8 (170-232)||(6991816-6991878)
chr8 (170-232)||(10184135-10184196)
chr8 (170-232)||(20473780-20473841)
chr8 (170-232)||(40608514-40608575)
chr8 (170-232)||(42786668-42786730)
chr8 (170-232)||(43715876-43715937)
chr8 (172-232)||(4169751-4169810)
chr8 (176-232)||(39359743-39359798)
[»] chr4 (41 HSPs)
chr4 (170-232)||(40755922-40755983)
chr4 (170-232)||(32696797-32696859)
chr4 (170-232)||(9472522-9472583)
chr4 (170-232)||(12241059-12241120)
chr4 (170-232)||(33820345-33820406)
chr4 (170-232)||(53357086-53357147)
chr4 (170-232)||(55996423-55996484)
chr4 (166-231)||(48649515-48649580)
chr4 (170-230)||(43608054-43608113)
chr4 (168-232)||(46844250-46844313)
chr4 (170-232)||(149296-149357)
chr4 (170-232)||(1562545-1562606)
chr4 (170-232)||(25523207-25523268)
chr4 (170-232)||(42815405-42815467)
chr4 (170-228)||(44571437-44571494)
chr4 (170-231)||(47288083-47288144)
chr4 (172-232)||(48743713-48743772)
chr4 (170-228)||(11546913-11546972)
chr4 (177-232)||(17805460-17805514)
chr4 (170-232)||(1795990-1796052)
chr4 (170-232)||(3968886-3968947)
chr4 (170-232)||(4489808-4489868)
chr4 (170-232)||(12638826-12638887)
chr4 (170-232)||(15522355-15522417)
chr4 (170-232)||(25139964-25140025)
chr4 (170-224)||(31469005-31469059)
chr4 (170-232)||(38792898-38792959)
chr4 (170-232)||(38864744-38864806)
chr4 (170-232)||(39881039-39881100)
chr4 (170-232)||(44257738-44257800)
chr4 (170-232)||(45779300-45779361)
chr4 (170-232)||(52204851-52204913)
chr4 (170-232)||(55595950-55596011)
chr4 (172-205)||(23758353-23758386)
chr4 (171-232)||(29525860-29525920)
chr4 (172-232)||(925071-925130)
chr4 (170-230)||(35694604-35694662)
chr4 (172-232)||(38160782-38160841)
chr4 (172-232)||(46363988-46364047)
chr4 (172-232)||(52430880-52430940)
chr4 (170-206)||(53662462-53662498)
[»] chr7 (25 HSPs)
chr7 (170-232)||(42276092-42276153)
chr7 (170-232)||(42598216-42598278)
chr7 (170-232)||(44496811-44496873)
chr7 (170-232)||(33212043-33212104)
chr7 (170-232)||(34108863-34108925)
chr7 (170-232)||(46829480-46829542)
chr7 (172-232)||(6269369-6269429)
chr7 (172-232)||(34304687-34304746)
chr7 (170-232)||(26153647-26153707)
chr7 (170-232)||(2790178-2790239)
chr7 (170-228)||(6353726-6353783)
chr7 (170-232)||(7990080-7990141)
chr7 (170-232)||(9031206-9031267)
chr7 (170-232)||(9055268-9055329)
chr7 (170-232)||(18111620-18111682)
chr7 (170-232)||(27331036-27331097)
chr7 (170-228)||(30061282-30061340)
chr7 (170-228)||(40212502-40212559)
chr7 (170-232)||(40854663-40854725)
chr7 (170-232)||(42584803-42584865)
chr7 (170-231)||(35822984-35823045)
chr7 (172-232)||(24532951-24533011)
chr7 (176-232)||(29034108-29034163)
chr7 (170-230)||(42476556-42476615)
chr7 (172-232)||(42640846-42640905)
[»] chr2 (31 HSPs)
chr2 (170-232)||(17917390-17917451)
chr2 (170-232)||(21738624-21738686)
chr2 (170-232)||(34372848-34372909)
chr2 (170-232)||(6336253-6336315)
chr2 (170-232)||(31635819-31635880)
chr2 (171-232)||(16799674-16799735)
chr2 (172-228)||(16447259-16447314)
chr2 (172-232)||(27939160-27939220)
chr2 (170-230)||(40358122-40358182)
chr2 (169-232)||(7502436-7502499)
chr2 (170-232)||(1889148-1889209)
chr2 (170-232)||(3091742-3091803)
chr2 (170-228)||(6746218-6746275)
chr2 (170-232)||(8352836-8352897)
chr2 (170-232)||(12784407-12784469)
chr2 (170-232)||(13466084-13466145)
chr2 (170-232)||(14797659-14797720)
chr2 (170-232)||(23880096-23880157)
chr2 (170-220)||(28277787-28277837)
chr2 (172-230)||(29192662-29192719)
chr2 (170-232)||(32688553-32688614)
chr2 (170-232)||(33857218-33857279)
chr2 (172-232)||(5361798-5361856)
chr2 (172-232)||(16051426-16051486)
chr2 (170-232)||(23045094-23045152)
chr2 (170-206)||(1876321-1876357)
chr2 (170-202)||(16754397-16754429)
chr2 (170-206)||(17159567-17159603)
chr2 (174-222)||(19052736-19052783)
chr2 (170-230)||(19109104-19109163)
chr2 (170-230)||(34134781-34134841)
[»] chr1 (37 HSPs)
chr1 (170-232)||(740964-741026)
chr1 (170-232)||(45042262-45042323)
chr1 (170-232)||(1689392-1689454)
chr1 (170-230)||(12306144-12306204)
chr1 (173-232)||(48325226-48325284)
chr1 (170-232)||(18959005-18959066)
chr1 (170-232)||(46281437-46281499)
chr1 (170-230)||(52233232-52233291)
chr1 (169-232)||(1788353-1788415)
chr1 (173-232)||(2492417-2492476)
chr1 (165-228)||(18541064-18541126)
chr1 (173-232)||(50775165-50775224)
chr1 (170-232)||(12713545-12713606)
chr1 (170-232)||(12717636-12717697)
chr1 (170-232)||(15182592-15182653)
chr1 (170-232)||(25988993-25989054)
chr1 (170-232)||(27810256-27810317)
chr1 (170-232)||(28253016-28253077)
chr1 (170-228)||(30505349-30505406)
chr1 (170-232)||(30535992-30536054)
chr1 (170-232)||(30973553-30973615)
chr1 (170-232)||(31436821-31436882)
chr1 (170-232)||(32811876-32811937)
chr1 (170-232)||(33076120-33076182)
chr1 (170-232)||(36690581-36690642)
chr1 (170-232)||(36706682-36706743)
chr1 (170-232)||(44672039-44672100)
chr1 (170-232)||(49020412-49020474)
chr1 (170-232)||(49596236-49596297)
chr1 (170-232)||(50141944-50142005)
chr1 (170-232)||(52437495-52437557)
chr1 (171-232)||(29877299-29877360)
chr1 (168-232)||(3558845-3558909)
chr1 (170-230)||(6949991-6950051)
chr1 (170-232)||(12999831-12999892)
chr1 (170-226)||(29632435-29632490)
chr1 (180-232)||(37515927-37515978)
[»] chr3 (33 HSPs)
chr3 (170-232)||(51032633-51032694)
chr3 (171-232)||(47988494-47988554)
chr3 (171-232)||(47997781-47997841)
chr3 (171-232)||(48007068-48007128)
chr3 (176-232)||(32536747-32536803)
chr3 (170-230)||(52714734-52714794)
chr3 (170-232)||(21579115-21579176)
chr3 (170-232)||(29705904-29705965)
chr3 (170-232)||(31017403-31017464)
chr3 (170-232)||(37894251-37894313)
chr3 (170-232)||(40159847-40159908)
chr3 (170-232)||(51771448-51771509)
chr3 (170-227)||(48179067-48179123)
chr3 (168-232)||(45657778-45657842)
chr3 (170-232)||(48944719-48944780)
chr3 (170-230)||(50559222-50559282)
chr3 (170-232)||(6178434-6178495)
chr3 (170-228)||(11335315-11335372)
chr3 (170-232)||(12094398-12094459)
chr3 (170-232)||(28920058-28920120)
chr3 (170-232)||(29573364-29573426)
chr3 (172-218)||(30251003-30251048)
chr3 (170-232)||(40367609-40367671)
chr3 (170-232)||(45186560-45186622)
chr3 (170-232)||(45293037-45293099)
chr3 (170-232)||(48287672-48287734)
chr3 (170-232)||(49196697-49196758)
chr3 (172-232)||(26452731-26452791)
chr3 (170-231)||(36756060-36756121)
chr3 (167-232)||(48649578-48649642)
chr3 (172-232)||(39540238-39540297)
chr3 (172-232)||(41369600-41369659)
chr3 (170-206)||(49761220-49761256)
[»] scaffold0184 (1 HSPs)
scaffold0184 (170-232)||(16603-16664)
[»] scaffold0078 (1 HSPs)
scaffold0078 (170-232)||(56180-56241)
[»] chr6 (11 HSPs)
chr6 (170-232)||(9083070-9083131)
chr6 (170-230)||(28647446-28647505)
chr6 (172-232)||(34490350-34490409)
chr6 (170-232)||(7577195-7577256)
chr6 (170-232)||(12044333-12044394)
chr6 (170-232)||(14094701-14094762)
chr6 (170-232)||(17835613-17835674)
chr6 (170-232)||(32253781-32253842)
chr6 (170-206)||(16352183-16352219)
chr6 (170-230)||(27102116-27102175)
chr6 (170-230)||(27143938-27143997)
[»] chr5 (22 HSPs)
chr5 (170-232)||(2456027-2456088)
chr5 (170-228)||(5996668-5996725)
chr5 (170-232)||(6529020-6529081)
chr5 (170-232)||(22098256-22098318)
chr5 (170-232)||(36416071-36416132)
chr5 (172-232)||(15291014-15291073)
chr5 (178-232)||(2678092-2678146)
chr5 (170-232)||(6758799-6758861)
chr5 (170-232)||(6940158-6940220)
chr5 (170-228)||(9939444-9939502)
chr5 (170-232)||(18695319-18695381)
chr5 (170-232)||(19376141-19376202)
chr5 (170-228)||(26686882-26686940)
chr5 (170-228)||(26956613-26956671)
chr5 (170-232)||(31708371-31708432)
chr5 (170-232)||(38293367-38293429)
chr5 (170-232)||(40829415-40829477)
chr5 (170-232)||(41192588-41192649)
chr5 (171-228)||(14321967-14322024)
chr5 (169-229)||(8009903-8009963)
chr5 (172-228)||(13309885-13309941)
chr5 (170-206)||(13547268-13547304)
[»] scaffold0154 (1 HSPs)
scaffold0154 (170-231)||(9858-9918)
[»] scaffold0041 (1 HSPs)
scaffold0041 (172-232)||(34411-34470)


Alignment Details
Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 34494708 - 34494647
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  34494708 agaaatgatatttgtacaactattttctaacaatttt-ttgaaaattttctctctcatactca 34494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 295546 - 295608
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||| | |||||||| ||||||| |||||||||||||||||    
T  295546 agaaatgatatttgtacaaccactttatcacaatttttttgataactttctctctcatactca 295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 9048386 - 9048325
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || ||| |||||||||||| ||| |||| ||||||||||||||||||||    
T  9048386 agaaatgatatttgtataaccattttctaacaacttt-ttgacaattttctctctcatactca 9048325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 9738763 - 9738702
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||||||| |||| ||||||||||||||||||||    
T  9738763 agaaatgatatttgtacaaccactttctcacaatttt-ttgacaattttctctctcatactca 9738702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 22767133 - 22767194
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||||| |||| ||| |||| ||||||||||||||||||||    
T  22767133 agaaatgatatttgtacaaccattttctcacaacttt-ttgacaattttctctctcatactca 22767194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 25830316 - 25830254
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| |||  ||| || |||||||||||||||||    
T  25830316 agaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactca 25830254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 31806300 - 31806357
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||| |||||| |||||||||||||||| |||| || |||||||||||||    
T  31806300 agaaatgatatttgtacaaccattttctaacaatttt-ttgacaactttctctctcata 31806357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 35818938 - 35818999
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||  ||||| |||||||||||||||| |||| || |||||||||||||||||    
T  35818938 agaaatgatatttgcacaaccattttctaacaatttt-ttgacaactttctctctcatactca 35818999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 45406054 - 45405992
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||  ||||||||||| ||| ||||||  |||||||||| |||||||||||||    
T  45406054 agaaatgatatttgaacaactattttttaataatttttgtgataattttttctctcatactca 45405992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 5359339 - 5359398
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    |||||||||||||||||||||| ||| | |||||||| ||||||| |||||||| ||||||    
T  5359339 agaaatgatatttatacaactactttatgacaatttt-ttgataactttctctcacatact 5359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 7795375 - 7795315
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    |||||||||||||||| ||||||||| |||||| |||  ||| |||||||||||| |||||    
T  7795375 agaaatgatatttatagaactattttttaacaacttttgtgacaattttctctcttatact 7795315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 44711979 - 44712038
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||||||||| || ||| ||| |||||| |||| ||||||||||||||||||    
T  44711979 agaaatgatatttatacaattaatttgtaataatttt-ttgacaattttctctctcatact 44712038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 67231 - 67172
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatac 229  Q
    ||||||||||||| |||||| |||||||||||| |||  ||| || ||||||||||||||    
T  67231 agaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatac 67172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 6991878 - 6991816
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||  ||| ||||||  | ||||||||  ||||||||||||||||||||||||    
T  6991878 agaaatgatatttgaacatctatttggtgacaatttttgtgataattttctctctcatactca 6991816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 10184196 - 10184135
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || | |||||||  || |||||| |||||||||||||||||||||||||    
T  10184196 agaaatgatatttgtatatctattttgcaataatttt-ttgataattttctctctcatactca 10184135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 20473780 - 20473841
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||||||| |||| || ||||||| |||||||||    
T  20473780 agaaatgatatttgtacaaccattttataacaatttt-ttgacaactttctctatcatactca 20473841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 40608514 - 40608575
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||  | |||||||||||||| |||| |||||| |||||||||||||    
T  40608514 agaaatgatatttgtacaatcaatttctaacaatttt-ttgacaattttttctctcatactca 40608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 42786730 - 42786668
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||||| ||||||||  ||| || ||||||||| |||||||    
T  42786730 agaaatgatatttgtacaaccattttcttacaatttttgtgacaactttctctcttatactca 42786668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 43715876 - 43715937
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||||||| | ||||| ||| || |||||||||||||||||    
T  43715876 agaaatgatatttgtacaaccattttctaaaacttttg-tgacaactttctctctcatactca 43715937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4169751 - 4169810
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||| ||||||||||||  || |||| || ||||||| |||||||||    
T  4169751 aaatgatatttatacaaccattttctaacaa-cttcttgacaagtttctctgtcatactca 4169810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 39359743 - 39359798
Alignment:
Q  176 gatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||| |||||| ||||||| |||||||| | || ||||||||||||||||||||    
T  39359743 gatatttgtacaaccattttctgacaatttt-tggacaattttctctctcatactca 39359798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 40755922 - 40755983
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  40755922 agaaatgatatttgtacaaccattttctaacaatttt-ttgataattttctctctcatactca 40755983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 32696859 - 32696797
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| |||  ||||||||||||||||||||||||    
T  32696859 agaaatgatatttgtacaaccattttctaacaacttttgtgataattttctctctcatactca 32696797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 9472583 - 9472522
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||||||| |||||| |||| || |||||||||||||||||    
T  9472583 agaaatgatatttgtacaactattttctaataatttt-ttgacaactttctctctcatactca 9472522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 12241059 - 12241120
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||||||||| ||| |||| || |||||||||||||||||    
T  12241059 agaaatgatatttgtacaactattttctaacaacttt-ttgacaactttctctctcatactca 12241120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 33820406 - 33820345
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||||||||| ||| |||| || |||||||||||||||||    
T  33820406 agaaatgatatttgtacaactattttctaacaacttt-ttgacaactttctctctcatactca 33820345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 53357147 - 53357086
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || |||||||||||||||||||| |||| || |||||||||||||||||    
T  53357147 agaaatgatatttgtataactattttctaacaatttt-ttgacaactttctctctcatactca 53357086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 55996423 - 55996484
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||  |||||||||||||||| |||| ||||||||||||||||||||    
T  55996423 agaaatgatatttgtacaatcattttctaacaatttt-ttgacaattttctctctcatactca 55996484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 48649515 - 48649580
Alignment:
Q  166 gtatagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactc 231  Q
    |||||||| |||||||| |||||| |||||||||||| |||  ||| |||||||||||||||||||    
T  48649515 gtatagaagtgatatttttacaaccattttctaacaacttttgtgacaattttctctctcatactc 48649580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 43608113 - 43608054
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||| ||| |||||||||||    
T  43608113 agaaatgatatttatacaagtattttctcacaatttt-ttgataactttatctctcatact 43608054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 46844313 - 46844250
Alignment:
Q  168 atagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| | |||||||||||| |||||||||| |||| || |||||||||||||||||    
T  46844313 atagaaatgatatctgtacaactattttgtaacaatttt-ttgacaactttctctctcatactca 46844250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 149357 - 149296
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | |||||||||||||| |||| || |||||||||||||||||    
T  149357 agaaatgatatttgtacaaccaatttctaacaatttt-ttgacaactttctctctcatactca 149296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 1562606 - 1562545
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| ||| |||| || |||||||||||||||||    
T  1562606 agaaatgatatttgtacaaccattttctaacaacttt-ttgacaactttctctctcatactca 1562545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 25523268 - 25523207
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||||| |||| ||| |||| || |||||||||||||||||    
T  25523268 agaaatgatatttgtacaactattttctcacaacttt-ttgacaactttctctctcatactca 25523207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 42815405 - 42815467
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| |||||| |||  ||| || |||||||||||||||||    
T  42815405 agaaatgatatttgtacaactattttgtaacaacttttgtgacaactttctctctcatactca 42815467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 44571494 - 44571437
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||||||||| || ||| ||| |||||| |||||||||||||||||||||    
T  44571494 agaaatgatatttatacaattaatttgtaataatttt-ttgataattttctctctcata 44571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 47288083 - 47288144
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactc 231  Q
    ||||||||||||| |||||| ||||| ||||||||||  ||| || ||||||||||||||||    
T  47288083 agaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctctcatactc 47288144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 48743713 - 48743772
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||| | ||| |||||||||| |||| ||||||||||||||||||||    
T  48743713 aaatgatatttgtacaaccaatttttaacaatttt-ttgacaattttctctctcatactca 48743772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 11546972 - 11546913
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaa-ttttgttgataattttctctctcata 228  Q
    ||||||||||||| |||||| |||||||||||| ||||  |||||| |||||||||||||    
T  11546972 agaaatgatatttttacaaccattttctaacaactttttgtgataactttctctctcata 11546913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 17805460 - 17805514
Alignment:
Q  177 atatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||| |||||||||||| ||| |||||| |||| ||||||||||||||||||||    
T  17805460 atatttgtacaactattttttaataatttt-ttgacaattttctctctcatactca 17805514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 1796052 - 1795990
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| |||  |||||| ||| |||||||||||||    
T  1796052 agaaatgatatttgtacaacaattttttaacaacttttgtgataactttatctctcatactca 1795990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 3968886 - 3968947
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| ||| |||| ||||||| || |||||||||    
T  3968886 agaaatgatatttgtacaaccattttctaacaacttt-ttgacaattttccctttcatactca 3968947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 4489868 - 4489808
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || ||| |||||||||||||||| |||| || |||||||||||||||||    
T  4489868 agaaatgatatttgtataaccattttctaacaatttt-ttgacaa-tttctctctcatactca 4489808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 12638826 - 12638887
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||| ||| |||||||||| | || || |||||||||||||||||    
T  12638826 agaaatgatatttgtacaactactttgtaacaatttt-tagacaactttctctctcatactca 12638887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 15522355 - 15522417
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| | |||||| |||||||||||| |||  |||||| |||||||||| ||||||    
T  15522355 agaaatgatatatgtacaaccattttctaacaacttttgtgataactttctctctcctactca 15522417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 25140025 - 25139964
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||| | |||||||| |||| ||||||||||||||||||||    
T  25140025 agaaatgatatttgtacaaccactttattacaatttt-ttgacaattttctctctcatactca 25139964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 31469059 - 31469005
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctct 224  Q
    ||||||||||| | |||||| ||||||||||||||||  ||| ||||||||||||    
T  31469059 agaaatgatatatgtacaaccattttctaacaatttttgtgacaattttctctct 31469005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 38792959 - 38792898
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||||||||   ||||||||||||||||  ||| || |||||||||||||||||    
T  38792959 agaaatgatatttatacattcattttctaacaatttt-atgacaactttctctctcatactca 38792898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 38864806 - 38864744
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||| |||||| | |||| ||| |||| || |||||||||||||||||    
T  38864806 agaaatgatatttgtacaattattttgtgacaacttttttgacaactttctctctcatactca 38864744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 39881100 - 39881039
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||  |||||||||||| ||| |||| || |||||||||||||||||    
T  39881100 agaaatgatatttgtacaatcattttctaacaacttt-ttgacaactttctctctcatactca 39881039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 44257800 - 44257738
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| | |||  ||||||||||||||||  ||| || |||||||||||||||||    
T  44257800 agaaatgatatttgtgcaatcattttctaacaatttttgtgacaactttctctctcatactca 44257738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 45779361 - 45779300
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||||||||| | | |||||| |||| || ||||| |||||||||||    
T  45779361 agaaatgatatttatacaactattttgttataatttt-ttgacaactttctttctcatactca 45779300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 52204851 - 52204913
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||  |||| |||||| ||||||||||  | |||||||||||| |||||||||    
T  52204851 agaaatgatatttgaacaattattttttaacaatttttgttataattttctctttcatactca 52204913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 55595950 - 55596011
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | |||||||||| ||| |||| || |||||||||||||||||    
T  55595950 agaaatgatatttgtacaaccaatttctaacaacttt-ttgacaactttctctctcatactca 55596011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 23758386 - 23758353
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattt 205  Q
    |||||||||||||||||||||||| |||||||||    
T  23758386 aaatgatatttatacaactattttttaacaattt 23758353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 29525860 - 29525920
Alignment:
Q  171 gaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||| |||||| ||||| | |||| ||| ||||||| |||||||||||||||||    
T  29525860 gaaatgatatttgtacaaccattttattacaacttt-ttgataactttctctctcatactca 29525920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 925130 - 925071
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||| ||||| | |||| ||| | || ||||||||||||||||||||    
T  925130 aaatgatatttatacaaccattttgtgacaacttt-tagacaattttctctctcatactca 925071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 35694662 - 35694604
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| ||||| |||||| |||||| ||| ||||||||||| |||||||||||    
T  35694662 agaaatgatatttgtacaa-tattttttaacaacttt-ttgataattttttctctcatact 35694604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 38160841 - 38160782
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||||||| | |||||  | |||| || |||||||||||||||||    
T  38160841 aaatgatatttatacaactattttgtgacaatcat-ttgacaactttctctctcatactca 38160782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 46364047 - 46363988
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||| | |||||| |||||||||||||||| |||| || |||||||| ||||||||    
T  46364047 aaatgatatctgtacaaccattttctaacaatttt-ttgacaactttctctcacatactca 46363988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 52430880 - 52430940
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||||||||| | |||| |||  ||| ||||||||||||| ||||||    
T  52430880 aaatgatatttgtacaactattttatgacaacttttatgacaattttctctctcgtactca 52430940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 53662498 - 53662462
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaatttt 206  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  53662498 agaaatgatatttgtacaactattttgtaacaatttt 53662462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 42276092 - 42276153
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  42276092 agaaatgatatttgtacaactattttctaacaatttt-ttgataactttctctcttatactca 42276153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 42598278 - 42598216
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| ||||||||||  |||||| ||| |||||||||||||    
T  42598278 agaaatgatatttgtacaactattttttaacaatttttgtgataactttatctctcatactca 42598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 44496873 - 44496811
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || ||||||||||||||||||||  ||| || |||||||||||||||||    
T  44496873 agaaatgatatttgtataactattttctaacaatttttgtgacaactttctctctcatactca 44496811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 33212043 - 33212104
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||||||| |||| || ||| |||||||||||||    
T  33212043 agaaatgatatttgtacaaccattttctaacaatttt-ttgacaactttatctctcatactca 33212104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 34108925 - 34108863
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| | |||||| |||||||||||| |||  ||| ||||||||||||||||||||    
T  34108925 agaaatgatatatgtacaaccattttctaacaacttttgtgacaattttctctctcatactca 34108863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 46829480 - 46829542
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| ||||||||||  ||| || |||||||||||||||||    
T  46829480 agaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttctctctcatactca 46829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6269369 - 6269429
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||| ||||| ||||||||||  ||| || |||||||||||||||||    
T  6269369 aaatgatatttgtacaaccattttataacaatttttgtgacaactttctctctcatactca 6269429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 34304746 - 34304687
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||||||||| | |||||||| | || ||||||||||||||||||||    
T  34304746 aaatgatatttgtacaactattttttgacaatttt-tagacaattttctctctcatactca 34304687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 26153647 - 26153707
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| | |||| ||  |||| ||||||||||||||||||||    
T  26153647 agaaatgatatttgtacaactattttatgacaactt--ttgacaattttctctctcatactca 26153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 2790178 - 2790239
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||| |||||||||| |||| || |||||||||||||||||    
T  2790178 agaaatgatatttgtacaaccactttgtaacaatttt-ttgacaactttctctctcatactca 2790239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 6353726 - 6353783
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||| |||||| ||||| | ||||||||| |||||| |||||||||||||    
T  6353726 agaaatgatatttgtacaaccattttttgacaattttg-tgataactttctctctcata 6353783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 7990080 - 7990141
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||| ||||||| | | |||||| ||||||||||||||||| |||||||    
T  7990080 agaaatgatatttgtacatctattttatgataatttt-ttgataattttctctcttatactca 7990141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 9031206 - 9031267
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||  ||||| | |||||||| | |||||||||||||||||||||||    
T  9031206 agaaatgatatttgtacaaacattttgttacaatttt-tagataattttctctctcatactca 9031267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 9055268 - 9055329
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | |||||||||| ||| |||| || |||||||||||||||||    
T  9055268 agaaatgatatttgtacaaccaatttctaacaacttt-ttgacaactttctctctcatactca 9055329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 18111682 - 18111620
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||| || |||||| ||||| ||| ||||||  ||| ||||||||||||||||||||    
T  18111682 agaaatgatacttctacaaccattttataataatttttgtgacaattttctctctcatactca 18111620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 27331097 - 27331036
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || |||||||||||||||||||| |||| || ||| ||| |||||||||    
T  27331097 agaaatgatatttgtataactattttctaacaatttt-ttgacaactttatctatcatactca 27331036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 30061282 - 30061340
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    |||||||||||||  ||||||||||| | ||||||||  ||| ||||||||||||||||    
T  30061282 agaaatgatattttaacaactattttttgacaatttttgtgacaattttctctctcata 30061340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 40212559 - 40212502
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    |||||| |||||| |||||| | |||||||||||||| |||| ||||||||||||||||    
T  40212559 agaaataatatttgtacaaccactttctaacaatttt-ttgacaattttctctctcata 40212502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 40854725 - 40854663
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| | |||| | |||||||||||| |||  ||| ||||||||||||||||||||    
T  40854725 agaaatgatatctgtacatccattttctaacaacttttgtgacaattttctctctcatactca 40854663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 42584803 - 42584865
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| | |||||| |||||||||||| |||  ||| || |||||||||||||||||    
T  42584803 agaaatgatatatgtacaaccattttctaacaacttttgtgacaactttctctctcatactca 42584865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 35823045 - 35822984
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactc 231  Q
    ||||||||||||| |||| | ||||||||||||||||  ||| || ||||||||||| ||||    
T  35823045 agaaatgatatttgtacatccattttctaacaatttttatgacaactttctctctcacactc 35822984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24533011 - 24532951
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||  ||||||||||||| | ||||||  ||| |||||| |||||||||||||    
T  24533011 aaatgatatttgaacaactattttctgataatttttgtgacaattttttctctcatactca 24532951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 29034108 - 29034163
Alignment:
Q  176 gatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||| |||||  ||||| | |||||||| |||||||||||||||||||||||||    
T  29034108 gatatttgtacaatcattttgtgacaatttt-ttgataattttctctctcatactca 29034163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 42476615 - 42476556
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| ||||||  ||||||||||||||| | || || |||||||||||||||    
T  42476615 agaaatgatatttgtacaacatttttctaacaatttt-tggacaactttctctctcatact 42476556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 42640846 - 42640905
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| ||||||||||||||||||| ||| |||| || |||||||  ||||||||    
T  42640846 aaatgatatttgtacaactattttctaacaacttt-ttgacaactttctcttacatactca 42640905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 17917390 - 17917451
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  17917390 agaaatgatatttgtacaattattttttaacaatttt-ttgataattttctctctcatactca 17917451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 21738686 - 21738624
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||||||| ||||||  ||||||||||||||||||||||||    
T  21738686 agaaatgatatttgtacaaccattttctaataatttttgtgataattttctctctcatactca 21738624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 34372848 - 34372909
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  34372848 agaaatgatatttctacaattattttctaacaatttt-ttgacaattttctctctcatactca 34372909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 6336253 - 6336315
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| |||  ||| || |||||||||||||||||    
T  6336253 agaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactca 6336315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 31635880 - 31635819
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| ||| |||| || |||||||||||||||||    
T  31635880 agaaatgatatttgtacaaccattttctaacaacttt-ttgacaactttctctctcatactca 31635819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 16799674 - 16799735
Alignment:
Q  171 gaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||| |||| | |||| |||||||||||  |||||| |||||||||||||||||    
T  16799674 gaaatgatatttgtacatccatttcctaacaatttttgtgataactttctctctcatactca 16799735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 16447314 - 16447259
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||| |||||| ||||| | |||||||| |||||||||||||||||||||    
T  16447314 aaatgatatttgtacaaccattttattacaatttt-ttgataattttctctctcata 16447259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27939160 - 27939220
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||||||| | ||||||||  ||||||  || |||||||||||||    
T  27939160 aaatgatatttatacaactattttgtgacaatttttatgataacattatctctcatactca 27939220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 40358182 - 40358122
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| |||||||||||| ||| ||||||  ||| |||||| |||||||||||    
T  40358182 agaaatgatatttctacaactattttttaataatttttgtgacaattttttctctcatact 40358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 7502499 - 7502436
Alignment:
Q  169 tagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||| |||||| ||||| | ||||||||  ||| || |||||||||||||||||    
T  7502499 tagaaatgatatttgtacaaccattttttgacaatttttgtgacaactttctctctcatactca 7502436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 1889148 - 1889209
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||||||| |||| || |||||||||||||||||    
T  1889148 agaaatgatatttgtacaaccactttctgacaatttt-ttgacaactttctctctcatactca 1889209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 3091742 - 3091803
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| | | || ||| |||| ||||||||||||||||||||    
T  3091742 agaaatgatatttgtacaactattttgtgataacttt-ttgacaattttctctctcatactca 3091803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 6746218 - 6746275
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    |||||||||||||||||||||| ||| |||||| ||| || | ||||||||||||||||    
T  6746218 agaaatgatatttatacaactaatttttaacaacttt-ttaacaattttctctctcata 6746275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 8352836 - 8352897
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| ||| || ||| | || ||||||||||||||||||||    
T  8352836 agaaatgatatttgtacaactattttttaataacttt-tagacaattttctctctcatactca 8352897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 12784469 - 12784407
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| ||| ||||||  ||| || |||||||||||||||||    
T  12784469 agaaatgatatttgtacaaccattttataataatttttgtgacaactttctctctcatactca 12784407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 13466145 - 13466084
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | |||||||||||||| || | || |||||||||||||||||    
T  13466145 agaaatgatatttgtacaaccaatttctaacaatttt-ttaacaactttctctctcatactca 13466084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 14797720 - 14797659
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | |||||||||| ||| |||| || |||||||||||||||||    
T  14797720 agaaatgatatttgtacaaccaatttctaacaacttt-ttgacaactttctctctcatactca 14797659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 23880096 - 23880157
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||| ||| ||||||| |||||||||||||||||    
T  23880096 agaaatgatatttgtacaaccactttctcacaacttt-ttgataactttctctctcatactca 23880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 28277837 - 28277787
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttct 220  Q
    |||||||||||||||||||||||||||| |||| |||  |||||| |||||    
T  28277837 agaaatgatatttatacaactattttctgacaacttttgtgataactttct 28277787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 29192719 - 29192662
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||| |||||| ||||| ||| |||||| ||||||||||||||||| |||||    
T  29192719 aaatgatatttgtacaaccattttttaataatttt-ttgataattttctctcttatact 29192662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 32688614 - 32688553
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||||||| |||| || |||||||||||||||||    
T  32688614 agaaatgatatttgtacaaccactttctgacaatttt-ttgacaactttctctctcatactca 32688553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 33857218 - 33857279
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||   ||||||||||||||| |||| || |||||||||||||||||    
T  33857218 agaaatgatatttgtacaatctttttctaacaatttt-ttgacaactttctctctcatactca 33857279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5361798 - 5361856
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||  ||||||||| ||||||  ||| ||||||||||||||||||||    
T  5361798 aaatgatatttgtacaatcattttctaataatttt--tgacaattttctctctcatactca 5361856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16051486 - 16051426
Alignment:
Q  172 aaatgatatttatacaactatttt-ctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||| | ||||| ||||||| ||| |||||||||||||||||||||||||    
T  16051486 aaatgatatttgtacagccatttttctaacaacttt-ttgataattttctctctcatactca 16051426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 23045094 - 23045152
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||||||||    || |||| || |||||||||||||||||    
T  23045094 agaaatgatatttgtacaactattttctaac----tttttgacaactttctctctcatactca 23045152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 1876357 - 1876321
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaatttt 206  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1876357 agaaatgatatttatacaactattttttcacaatttt 1876321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 16754397 - 16754429
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaa 202  Q
    |||||||||||||||||||| ||||||||||||    
T  16754397 agaaatgatatttatacaacaattttctaacaa 16754429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 17159567 - 17159603
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaatttt 206  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  17159567 agaaatgatatttgtacaactattttttaacaatttt 17159603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 19052783 - 19052736
Alignment:
Q  174 atgatatttatacaactattttctaacaattttgttgataattttctct 222  Q
    |||||||||||||||| | ||| |||||||||| |||||||||||||||    
T  19052783 atgatatttatacaaccactttgtaacaatttt-ttgataattttctct 19052736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 19109163 - 19109104
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    |||||||||||||  ||||||||||| || |||||||  |||||| |||||||||||||||    
T  19109163 agaaatgatatttgaacaactatttttta-caatttttgtgataaatttctctctcatact 19109104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 34134841 - 34134781
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| |||||| ||||| |||||| |||  ||| || |||||||||||||||    
T  34134841 agaaatgatatttttacaaccattttgtaacaacttttctgacaactttctctctcatact 34134781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 741026 - 740964
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||||||||||||||||||||||| |||  ||| | ||||||||||||||||||    
T  741026 agaaatgatatttatacaactattttctaacaacttttgtgacatttttctctctcatactca 740964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 45042262 - 45042323
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  45042262 agaaatgatatttgtacaactattttctaacaatttt-ttgacaattttttctctcatactca 45042323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 1689392 - 1689454
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| ||||||||||  ||| || |||||||||||||||||    
T  1689392 agaaatgatatttgtacaactattttataacaatttttgtgacaactttctctctcatactca 1689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 12306204 - 12306144
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| ||||| |||||| ||||||||||  |||||||||||||| |||||||    
T  12306204 agaaatgatatttgtacaattattttataacaatttttgtgataattttctctttcatact 12306144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 48325226 - 48325284
Alignment:
Q  173 aatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||| ||||| |||||| |||||||||| | |||||||||||||||||||||||    
T  48325226 aatgatatttgtacaattattttttaacaatttt-tagataattttctctctcatactca 48325284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 18959005 - 18959066
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||| ||||| | |||| ||| |||| ||||||||||||||||||||    
T  18959005 agaaatgatatttatacaaccattttgttacaacttt-ttgacaattttctctctcatactca 18959066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 46281437 - 46281499
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| ||| ||||||  ||| || |||||||||||||||||    
T  46281437 agaaatgatatttgtacaactattttgtaataatttttgtgacaactttctctctcatactca 46281499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 52233291 - 52233232
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| |||||| ||||||| |||||||| |||| |||||||||| |||||||    
T  52233291 agaaatgatatttgtacaaccattttctcacaatttt-ttgacaattttctctatcatact 52233232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 1788415 - 1788353
Alignment:
Q  169 tagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||| | |||||| |||| ||||||||||| |||| |||||| |||||||||||||    
T  1788415 tagaaatgatatgtgtacaaccatttactaacaatttt-ttgacaattttatctctcatactca 1788353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 2492417 - 2492476
Alignment:
Q  173 aatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||| |||||| ||||| | |||| |||  ||||||||||||||||||||||||    
T  2492417 aatgatatttgtacaaccattttattacaacttttgtgataattttctctctcatactca 2492476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 18541126 - 18541064
Alignment:
Q  165 agtatagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    |||| ||||||||||||| |||||| |||||||||||| ||| |||| || |||||||||||||    
T  18541126 agtagagaaatgatatttgtacaaccattttctaacaacttt-ttgacaactttctctctcata 18541064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 50775224 - 50775165
Alignment:
Q  173 aatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||| |||||| | ||||||||  ||| || |||||||||||||||||    
T  50775224 aatgatatttatacaattattttttgacaatttttgtgacaactttctctctcatactca 50775165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 12713545 - 12713606
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || ||| |||||||||||| ||| |||| |||||||||| |||||||||    
T  12713545 agaaatgatatttgtagaaccattttctaacaacttt-ttgacaattttctctttcatactca 12713606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 12717636 - 12717697
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || ||| |||||||||||| ||| |||| |||||||||| |||||||||    
T  12717636 agaaatgatatttgtagaaccattttctaacaacttt-ttgacaattttctctttcatactca 12717697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 15182653 - 15182592
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||||||||| ||| |||| ||| || ||| |||||||||    
T  15182653 agaaatgatatttgtacaactattttctaacaacttt-ttgacaatattttctttcatactca 15182592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 25989054 - 25988993
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| ||| | || ||||||||||||||||||||    
T  25989054 agaaatgatatttgtacaaccattttttaacaacttt-tagacaattttctctctcatactca 25988993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 27810317 - 27810256
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | |||||||||| ||| |||| || |||||||||||||||||    
T  27810317 agaaatgatatttgtacaaccaatttctaacaacttt-ttgacaactttctctctcatactca 27810256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 28253016 - 28253077
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||| ||| |||| ||||||||||||||||||||    
T  28253016 agaaatgatatttgtacaaccactttctcacaacttt-ttgacaattttctctctcatactca 28253077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 30505406 - 30505349
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||| |||||| | |||||||||||||| |||| || |||||||||||||    
T  30505406 agaaatgatatttgtacaaccaatttctaacaatttt-ttgacaaatttctctctcata 30505349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 30535992 - 30536054
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||  ||||| ||||||||||  ||| || |||||||||||||||||    
T  30535992 agaaatgatatttgtacaatcattttttaacaatttttgtgacaactttctctctcatactca 30536054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 30973553 - 30973615
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||  |||||||||||||||  ||| || ||||||| |||||||||    
T  30973553 agaaatgatatttgtacaacccttttctaacaatttttgtgacaactttctctttcatactca 30973615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 31436821 - 31436882
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||| ||| |||| ||||||||||||||||||||    
T  31436821 agaaatgatatttgtacaaccactttctcacaacttt-ttgacaattttctctctcatactca 31436882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 32811937 - 32811876
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||| ||||| | |||| |||||||||| |||||||||    
T  32811937 agaaatgatatttgtacaacaattttctagcaattct-ttgacaattttctctttcatactca 32811876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 33076120 - 33076182
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| |||  ||| || ||||||| |||||||||    
T  33076120 agaaatgatatttgtacaaccattttctaacaacttttatgacaactttctctatcatactca 33076182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 36690642 - 36690581
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||||||| |||| || |||||||||||||||||    
T  36690642 agaaatgatatttgtacaaccaatttctcacaatttt-ttgacaactttctctctcatactca 36690581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 36706743 - 36706682
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||||||| |||| || |||||||||||||||||    
T  36706743 agaaatgatatttgtacaaccaatttctcacaatttt-ttgacaactttctctctcatactca 36706682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 44672100 - 44672039
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||  ||||| |||||| ||| |||| ||||||||||||||||||||    
T  44672100 agaaatgatatttgtacaatcattttttaacaacttt-ttgacaattttctctctcatactca 44672039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 49020474 - 49020412
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| |||  ||| |||||| |||||||||||||    
T  49020474 agaaatgatatttgtacaaccattttttaacaacttttgtgacaattttttctctcatactca 49020412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 49596236 - 49596297
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| | |||||||| |||| || |||||||||||||||||    
T  49596236 agaaatgatatttgtacaaccattttattacaatttt-ttgacaactttctctctcatactca 49596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 50142005 - 50141944
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| | |||||||||||| |||| ||| |||| || |||||||||||||||||    
T  50142005 agaaatgatatttgttcaactattttctcacaacttt-ttgacaactttctctctcatactca 50141944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 52437495 - 52437557
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||||| ||||| ||| ||||||  ||| || |||||||||||||||||    
T  52437495 agaaatgatatatatacaaccattttttaataatttttgtgacaactttctctctcatactca 52437557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 29877299 - 29877360
Alignment:
Q  171 gaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||| |||||| |||||||||||| | |  ||| || |||||||||||||||||    
T  29877299 gaaatgatatttgtacaaccattttctaacaactcttatgacaactttctctctcatactca 29877360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 3558845 - 3558909
Alignment:
Q  168 atagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||||  | ||| | |||| |||  |||||| |||||||||||||||||    
T  3558845 atagaaatgatatttatacaatcaatttttgacaacttttatgataactttctctctcatactca 3558909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 6950051 - 6949991
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    |||||| ||| || ||||| ||||||  ||||| |||| ||||||||||||||||||||||    
T  6950051 agaaattataattgtacaattattttgcaacaactttgatgataattttctctctcatact 6949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 12999892 - 12999831
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaa-ttttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| ||||||  | || |||||||||||||||||    
T  12999892 agaaatgatatttgtacaaccattttctaacaacttttgt--acaactttctctctcatactca 12999831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 29632435 - 29632490
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctca 226  Q
    ||||||||||||| ||||  |||||| |||||||||| |||| ||||||||||||||    
T  29632435 agaaatgatatttgtacatttattttgtaacaatttt-ttgacaattttctctctca 29632490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 37515927 - 37515978
Alignment:
Q  180 tttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||| | | |||||| |||| ||||||||||||||||||||    
T  37515927 tttatacaactattttatgataatttt-ttgacaattttctctctcatactca 37515978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 51032694 - 51032633
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| ||| |||| ||||||||||||||||||||    
T  51032694 agaaatgatatttgtacaaccattttctaacaacttt-ttgacaattttctctctcatactca 51032633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 47988554 - 47988494
Alignment:
Q  171 gaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||| ||||||||||||||||||| ||| |||| || |||||||||||||||||    
T  47988554 gaaatgatatttgtacaactattttctaacaacttt-ttgacaactttctctctcatactca 47988494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 47997841 - 47997781
Alignment:
Q  171 gaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||| ||||||||||||||||||| ||| |||| || |||||||||||||||||    
T  47997841 gaaatgatatttgtacaactattttctaacaacttt-ttgacaactttctctctcatactca 47997781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 48007128 - 48007068
Alignment:
Q  171 gaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||| ||||||||||||||||||| ||| |||| || |||||||||||||||||    
T  48007128 gaaatgatatttgtacaactattttctaacaacttt-ttgacaactttctctctcatactca 48007068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 32536747 - 32536803
Alignment:
Q  176 gatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||| |||||| | |||||||||||||| ||||||| |||||||||||||||||    
T  32536747 gatatttgtacaaccactttctaacaatttttttgataaatttctctctcatactca 32536803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 52714734 - 52714794
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| |||| | ||||||||||||||||  |||||| |||||||||||||||    
T  52714734 agaaatgatatttgtacatccattttctaacaatttttgtgataactttctctctcatact 52714794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 21579115 - 21579176
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||| | |||||||||| |||  ||| ||||||||||||||||||||    
T  21579115 agaaatgatatttatacaaccaatttctaacaacttt-atgacaattttctctctcatactca 21579176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 29705904 - 29705965
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||||||||| |||||| | | |||||| ||||||||||||||| |||||||||    
T  29705904 agaaatgatatttatacaattattttgtgataatttt-ttgataattttctctttcatactca 29705965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 31017464 - 31017403
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||  |||||||||||| ||| |||| ||||||||||||||||||||    
T  31017464 agaaatgatatttgtacaatcattttctaacaacttt-ttgacaattttctctctcatactca 31017403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 37894313 - 37894251
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| |||  ||| || |||||||||||||||||    
T  37894313 agaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactca 37894251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 40159908 - 40159847
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||||||||| ||| |||| || ||||||||||| |||||    
T  40159908 agaaatgatatttgtacaactattttctaacaacttt-ttgacaactttctctctcagactca 40159847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 51771509 - 51771448
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| ||  |||||| |||||||||||||||||||||||||    
T  51771509 agaaatgatatttgtacaaccattttgtat-aatttttttgataattttctctctcatactca 51771448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 48179123 - 48179067
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcat 227  Q
    ||||||||||||| |||||||||||||||||| |||| |||| || ||||||||||||    
T  48179123 agaaatgatatttgtacaactattttctaacagtttt-ttgacaactttctctctcat 48179067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 45657842 - 45657778
Alignment:
Q  168 atagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||||  ||||||||||||||||  ||| ||  ||||||||| ||||||    
T  45657842 atagaaatgatatttatacaatcattttctaacaatttttgtgacaacgttctctctcttactca 45657778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 48944780 - 48944719
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaa-ttttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| ||||||  | ||||||||||||||||||||    
T  48944780 agaaatgatatttgtacaaccattttctaacaacttttgt--acaattttctctctcatactca 48944719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 50559282 - 50559222
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| |||||||||||| | |||| |||  ||| ||||||||||||||||||    
T  50559282 agaaatgatatttgtacaactattttttgacaacttttgtgacaattttctctctcatact 50559222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 6178495 - 6178434
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||| | |||| |||  ||| ||||||||||||||||||||    
T  6178495 agaaatgatatttgtacaactatttt-tgacaacttttgtgacaattttctctctcatactca 6178434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 11335372 - 11335315
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||| |||||| |||||||||||| ||| |||| || |||||||||||||    
T  11335372 agaaatgatatttgtacaaccattttctaacaacttt-ttgacaactttctctctcata 11335315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 12094459 - 12094398
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||||||||| | |||||||| || | || | |||||||||||||||    
T  12094459 agaaatgatatttatacaactattttatgacaatttt-ttaaaaaatgtctctctcatactca 12094398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 28920120 - 28920058
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||||||||  ||| ||||||  ||| || |||||||||||||||||    
T  28920120 agaaatgatatttgtacaactatttgataataatttttgtgacaactttctctctcatactca 28920058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 29573426 - 29573364
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| |||  ||| || |||||||||||||||||    
T  29573426 agaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactca 29573364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 30251048 - 30251003
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataatttt 218  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||    
T  30251048 aaatgatatttgtacaaccattttctaacaatttt-ttgataatttt 30251003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 40367609 - 40367671
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||  | |||||||||  |||||||||  ||| ||||||||||||||||||||    
T  40367609 agaaatgatatttgaataactatttttaaacaatttttgtgacaattttctctctcatactca 40367671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 45186622 - 45186560
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||| ||||||| |||||| ||||||||||||||||  ||| || |||||||||||| ||||    
T  45186622 agaaaagatatttgtacaaccattttctaacaatttttgtgacaactttctctctcatgctca 45186560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 45293099 - 45293037
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||| |||||||||||  ||||| |||  ||| || |||||||||||||||||    
T  45293099 agaaatgatatttaaacaactatttttaaacaacttttgtgacaactttctctctcatactca 45293037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 48287672 - 48287734
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| |||  |||||||||||| |||||| ||||    
T  48287672 agaaatgatatttgtacaaccattttataacaacttttgtgataattttctttctcattctca 48287734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 49196697 - 49196758
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| | |||| ||||| || ||||||||||||||||||||    
T  49196697 agaaatgatatttgtacaaccattttgtgacaactttgt-gacaattttctctctcatactca 49196758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 26452791 - 26452731
Alignment:
Q  172 aaatgatatttatacaactattttctaacaa-ttttgttgataattttctctctcatactca 232  Q
    ||||||||| |||||||| |||||||||||| ||||||| | || |||||||||||||||||    
T  26452791 aaatgatatatatacaaccattttctaacaacttttgtt-acaactttctctctcatactca 26452731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 36756121 - 36756060
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactc 231  Q
    ||||||||||||| |||| | |||||||||| |||||  |||||| ||| ||||||||||||    
T  36756121 agaaatgatatttgtacatccattttctaaccatttttatgataactttttctctcatactc 36756060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 48649578 - 48649642
Alignment:
Q  167 tatagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||| ||||||||||| |||||| | |||||||||| ||| |||| || |||||||||||||||||    
T  48649578 tatataaatgatatttgtacaaccactttctaacaacttt-ttgacaactttctctctcatactca 48649642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 39540238 - 39540297
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||| | ||||| |||| ||| |||| ||||||||||||||||||||    
T  39540238 aaatgatatttgtacaaccactttctcacaacttt-ttgacaattttctctctcatactca 39540297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 41369600 - 41369659
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||| ||||||||| |||||| |||| || ||||||||||| |||||    
T  41369600 aaatgatatttgtacaaccattttctaataatttt-ttgacaactttctctctcaaactca 41369659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 49761256 - 49761220
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaatttt 206  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  49761256 agaaatgatatttgtacaaccattttctaacaatttt 49761220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 16664 - 16603
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| ||| | |||||||||||||||||||||||    
T  16664 agaaatgatatttgtacaaccattttgtaacaacttt-tagataattttctctctcatactca 16603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 56180 - 56241
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| ||| | |||||||||||||||||||||||    
T  56180 agaaatgatatttgtacaaccattttgtaacaacttt-tagataattttctctctcatactca 56241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 9083131 - 9083070
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| || ||||||||| ||||||||||  |||||| |||||||||||||||||    
T  9083131 agaaatgatatttgtataactattttttaacaatttttgtgataa-tttctctctcatactca 9083070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 28647505 - 28647446
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| || ||||||||| | |||||||| |||| ||||||||||||||||||    
T  28647505 agaaatgatatttgtataactattttattacaatttt-ttgacaattttctctctcatact 28647446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34490350 - 34490409
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||| ||||| |||||||||| | || ||||||||||||||||||||    
T  34490350 aaatgatatttgtacaaccattttttaacaatttt-tagacaattttctctctcatactca 34490409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 7577256 - 7577195
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||| ||||||| ||| |||||| | |||||||| ||||||||||||||    
T  7577256 agaaatgatatttgtacatctattttataataatttt-tggataatttactctctcatactca 7577195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 12044333 - 12044394
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||||||||||||||||||||| | |||| ||| | || || |||||||||||||||||    
T  12044333 agaaatgatatttatacaactattttttgacaacttt-tagacaactttctctctcatactca 12044394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 14094762 - 14094701
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||||||||| |||||| ||  | |||||  |||||||||||||||||||||||    
T  14094762 agaaatgatatttatacaattattttttataacttttgc-gataattttctctctcatactca 14094701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 17835613 - 17835674
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||  ||||||||||| ||| |||| || |||||||||||||||||    
T  17835613 agaaatgatatttgtacaacccttttctaacaacttt-ttgacaactttctctctcatactca 17835674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 32253781 - 32253842
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||| | | |||||||| |||||||||||||||||||||||    
T  32253781 agaaatgatatttgtacaaccactttttgataattttgt-gataattttctctctcatactca 32253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 16352219 - 16352183
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaatttt 206  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  16352219 agaaatgatatttatacaaccattttataacaatttt 16352183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 27102116 - 27102175
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| |||||| ||||||||| |||||| |||| |||||| ||||| |||||    
T  27102116 agaaatgatatttgtacaaccattttctaataatttt-ttgacaattttttctcttatact 27102175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 27143938 - 27143997
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatact 230  Q
    ||||||||||||| |||||| ||||||||| |||||| |||| |||||| ||||| |||||    
T  27143938 agaaatgatatttgtacaaccattttctaataatttt-ttgacaattttttctcttatact 27143997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 2456027 - 2456088
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||||||||||| |||||||||| |||| || ||||| |||||||||||    
T  2456027 agaaatgatatctatacaactattttataacaatttt-ttgacaactttctatctcatactca 2456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 5996668 - 5996725
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||| |||||||||||| |||||||||| | || ||||||||||||||||    
T  5996668 agaaatgatatttgtacaactattttttaacaatttt-tagacaattttctctctcata 5996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 6529020 - 6529081
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| || ||| |||||||||||||    
T  6529020 agaaatgatatttgtacaattattttctaacaatttt-ttgacaactttttctctcatactca 6529081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 22098256 - 22098318
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||| |||  ||| || |||||||||||||||||    
T  22098256 agaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactca 22098318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 36416132 - 36416071
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| |||||||||||||||| |||| || |||||||| ||||||||    
T  36416132 agaaatgatatttgtacaaccattttctaacaatttt-ttgacaactttctctcacatactca 36416071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 15291073 - 15291014
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||| ||| | |||||||||| ||||||| |||||||||||||||||    
T  15291073 aaatgatatttgtacaaccattgtttaacaatttt-ttgataactttctctctcatactca 15291014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 2678146 - 2678092
Alignment:
Q  178 tatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    |||||||| ||||||||| ||| ||||||  |||||||||||||| |||||||||    
T  2678146 tatttatataactattttgtaataatttttatgataattttctctttcatactca 2678092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 6758861 - 6758799
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| | |||||| ||||||||||||||||  ||| || ||||||||| |||||||    
T  6758861 agaaatgatatatgtacaaccattttctaacaatttttgtgacaactttctctcttatactca 6758799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 6940220 - 6940158
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| ||| ||||||  ||| || |||||||||||||||||    
T  6940220 agaaatgatatttgtacaaccattttataataatttttgtgacaactttctctctcatactca 6940158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 9939502 - 9939444
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||||||| || ||||| |||||| |||  ||| ||||||||||||||||    
T  9939502 agaaatgatatttatactaccattttgtaacaagttttgtgacaattttctctctcata 9939444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 18695319 - 18695381
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| |||  ||| || |||||||||||||||||    
T  18695319 agaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactca 18695381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 19376202 - 19376141
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| | ||||| |||| ||| ||||||| |||||||||||||||||    
T  19376202 agaaatgatatttgtacaaccactttctgacaacttt-ttgataactttctctctcatactca 19376141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 26686882 - 26686940
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||||||||| |||||| ||| ||||||  ||| || |||||||||||||    
T  26686882 agaaatgatatttatacaattattttttaataatttttgtgacaactttctctctcata 26686940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 26956613 - 26956671
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    ||||||||||||||||||| |||||| ||| ||||||  ||| || |||||||||||||    
T  26956613 agaaatgatatttatacaattattttttaataatttttgtgacaactttctctctcata 26956671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 31708371 - 31708432
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| |||||| ||| |||| || |||||||||||||||||    
T  31708371 agaaatgatatttgtacaaccattttataacaacttt-ttgacaactttctctctcatactca 31708432  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 38293429 - 38293367
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| ||||||||||  ||| || ||||||| |||||||||    
T  38293429 agaaatgatatttttacaaccattttataacaatttttgtgacaactttctctatcatactca 38293367  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 40829415 - 40829477
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| |||||| ||||| ||| ||||||  ||| |||||| |||||||||||||    
T  40829415 agaaatgatatttgtacaaccattttttaataatttttgtgacaattttttctctcatactca 40829477  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 41192588 - 41192649
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||||| ||||||||||||   |||||||| |||| || |||||||||||||||||    
T  41192588 agaaatgatatttgtacaactattttgctacaatttt-ttgacaactttctctctcatactca 41192649  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 14322024 - 14321967
Alignment:
Q  171 gaaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    |||||||||||| |||||| |||||||||||| |||  ||| || |||||||||||||    
T  14322024 gaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcata 14321967  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 8009903 - 8009963
Alignment:
Q  169 tagaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatac 229  Q
    ||||||||||||||||||||| ||||||| |||| |||   |||||  |||||||||||||    
T  8009903 tagaaatgatatttatacaaccattttcttacaacttttgggataaccttctctctcatac 8009963  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 13309885 - 13309941
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcata 228  Q
    |||||||||||  ||||||||||| | ||||||||  |||||| |||||||||||||    
T  13309885 aaatgatatttgaacaactattttttgacaatttttgtgataactttctctctcata 13309941  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 13547304 - 13547268
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaatttt 206  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  13547304 agaaatgatattcatacaactattttgtaacaatttt 13547268  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 9918 - 9858
Alignment:
Q  170 agaaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactc 231  Q
    ||||||||||||| |||||  ||||| | |||||||| |||| |||||||||||||||||||    
T  9918 agaaatgatatttgtacaatcattttttcacaatttt-ttgacaattttctctctcatactc 9858  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34411 - 34470
Alignment:
Q  172 aaatgatatttatacaactattttctaacaattttgttgataattttctctctcatactca 232  Q
    ||||||||||| |||||||||||| | |||| |||| ||| || |||||||||||||||||    
T  34411 aaatgatatttgtacaactattttttgacaactttg-tgacaactttctctctcatactca 34470  T

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