View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14476_high_22 (Length: 232)
Name: NF14476_high_22
Description: NF14476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14476_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 25304375 - 25304575
Alignment:
| Q |
14 |
aatattaataagaatcaccttgagatacatctgaagccaagaagaattaacctttgctcggtctaatttttcctccaccattatggttgtgtcagggctc |
113 |
Q |
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| T |
25304375 |
aatattaataagaatcaccttgatatacatatgaagccaagaagaattaacctttgctcattctaatttttcctccaccactatagttgtgtcagggctc |
25304474 |
T |
|
| Q |
114 |
tttatctatgtaaacatatgtcccttcaacttaatatcagacaaatcacaatcgttaacgtcttcacaaaatccattacacaaccaatttggatgtgcat |
213 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
25304475 |
tttatctatgtaaacatatgtcccttcagcttaatatcagacaaatcacaatcgttaacatcttcacaaaatccattacacaaccaatttggatgtgcat |
25304574 |
T |
|
| Q |
214 |
g |
214 |
Q |
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| T |
25304575 |
g |
25304575 |
T |
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