View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14476_low_21 (Length: 238)

Name: NF14476_low_21
Description: NF14476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14476_low_21
NF14476_low_21
[»] chr8 (83 HSPs)
chr8 (1-223)||(1043498-1043720)
chr8 (1-89)||(24469491-24469579)
chr8 (12-89)||(6121501-6121578)
chr8 (9-90)||(23404111-23404192)
chr8 (1-88)||(9117497-9117584)
chr8 (12-90)||(22780053-22780131)
chr8 (1-89)||(44728103-44728191)
chr8 (1-90)||(27702621-27702710)
chr8 (12-85)||(28463803-28463876)
chr8 (1-85)||(15315098-15315181)
chr8 (1-89)||(15315394-15315482)
chr8 (1-85)||(15495467-15495550)
chr8 (1-89)||(15495763-15495851)
chr8 (1-85)||(29218342-29218426)
chr8 (1-85)||(38507060-38507144)
chr8 (1-89)||(24043724-24043813)
chr8 (12-89)||(29276614-29276691)
chr8 (1-70)||(35435605-35435674)
chr8 (12-85)||(44318514-44318587)
chr8 (1-69)||(4157591-4157659)
chr8 (1-88)||(15891566-15891653)
chr8 (1-72)||(31618368-31618439)
chr8 (3-89)||(2251076-2251162)
chr8 (1-78)||(6942-7019)
chr8 (1-70)||(15315172-15315241)
chr8 (1-70)||(15495541-15495610)
chr8 (1-69)||(23275444-23275512)
chr8 (1-69)||(23403702-23403770)
chr8 (1-88)||(6121873-6121960)
chr8 (1-84)||(9779160-9779243)
chr8 (18-85)||(22444986-22445053)
chr8 (3-89)||(2257048-2257134)
chr8 (12-90)||(29276915-29276993)
chr8 (1-67)||(31827175-31827241)
chr8 (1-90)||(9117797-9117885)
chr8 (12-89)||(22444598-22444675)
chr8 (1-70)||(23275384-23275453)
chr8 (12-77)||(29457124-29457189)
chr8 (1-85)||(42691894-42691978)
chr8 (1-88)||(2250703-2250790)
chr8 (1-71)||(9117574-9117644)
chr8 (1-71)||(23403821-23403891)
chr8 (1-71)||(31826845-31826915)
chr8 (1-71)||(35435383-35435453)
chr8 (1-70)||(1692195-1692264)
chr8 (12-85)||(38507307-38507380)
chr8 (1-66)||(44318443-44318508)
chr8 (12-88)||(2257431-2257507)
chr8 (29-85)||(15300988-15301044)
chr8 (29-85)||(15481357-15481413)
chr8 (16-64)||(31618739-31618787)
chr8 (1-88)||(1043932-1044019)
chr8 (3-70)||(9117739-9117806)
chr8 (1-87)||(15300577-15300664)
chr8 (1-87)||(15480946-15481033)
chr8 (12-71)||(15891643-15891702)
chr8 (12-71)||(15891817-15891876)
chr8 (1-99)||(15891866-15891965)
chr8 (1-71)||(15300887-15300957)
chr8 (1-71)||(15481256-15481326)
chr8 (1-71)||(24043803-24043873)
chr8 (12-74)||(27702335-27702397)
chr8 (1-71)||(27702561-27702631)
chr8 (12-69)||(42620813-42620871)
chr8 (1-69)||(1691901-1691969)
chr8 (14-74)||(42692146-42692205)
chr8 (12-71)||(4157649-4157708)
chr8 (9-64)||(4157876-4157931)
chr8 (1-72)||(22444909-22444980)
chr8 (8-71)||(24469438-24469501)
chr8 (1-71)||(7172-7242)
chr8 (1-70)||(23403761-23403831)
chr8 (1-67)||(23404043-23404109)
chr8 (1-71)||(29218416-29218486)
chr8 (1-67)||(29276696-29276762)
chr8 (1-66)||(7014-7079)
chr8 (1-70)||(1043711-1043780)
chr8 (1-70)||(2250781-2250850)
chr8 (1-66)||(31618663-31618728)
chr8 (7-67)||(4157814-4157874)
chr8 (1-45)||(15300947-15300991)
chr8 (1-45)||(15481316-15481360)
chr8 (12-72)||(44728421-44728481)
[»] chr2 (64 HSPs)
chr2 (1-93)||(15787017-15787109)
chr2 (1-89)||(34334524-34334612)
chr2 (1-89)||(45638054-45638142)
chr2 (1-90)||(45638355-45638444)
chr2 (13-89)||(1844538-1844614)
chr2 (1-85)||(4603771-4603855)
chr2 (2-89)||(11973914-11974001)
chr2 (1-88)||(44436414-44436501)
chr2 (12-86)||(5482869-5482943)
chr2 (1-89)||(7881957-7882045)
chr2 (1-89)||(15286100-15286188)
chr2 (1-89)||(30851056-30851144)
chr2 (2-89)||(7438466-7438553)
chr2 (1-88)||(43865348-43865435)
chr2 (12-90)||(43671176-43671254)
chr2 (12-88)||(35125616-35125692)
chr2 (1-88)||(5247910-5247997)
chr2 (1-85)||(30851294-30851379)
chr2 (12-85)||(33616045-33616118)
chr2 (2-71)||(43671419-43671488)
chr2 (1-77)||(28182420-28182496)
chr2 (1-85)||(29683919-29684002)
chr2 (1-85)||(35125340-35125424)
chr2 (1-72)||(28182137-28182207)
chr2 (1-71)||(5247987-5248057)
chr2 (1-70)||(5483167-5483236)
chr2 (1-90)||(28238425-28238514)
chr2 (12-85)||(30512949-30513022)
chr2 (12-89)||(30823674-30823751)
chr2 (1-89)||(1039167-1039255)
chr2 (12-88)||(7881612-7881688)
chr2 (1-85)||(15285792-15285876)
chr2 (1-69)||(40343782-40343850)
chr2 (1-93)||(42553721-42553813)
chr2 (1-67)||(35125545-35125611)
chr2 (12-89)||(28238807-28238883)
chr2 (1-90)||(28582375-28582464)
chr2 (1-70)||(30513185-30513254)
chr2 (1-90)||(33953147-33953236)
chr2 (1-69)||(29683591-29683659)
chr2 (2-69)||(4603461-4603528)
chr2 (12-87)||(11974197-11974272)
chr2 (12-71)||(33953450-33953509)
chr2 (1-71)||(28582454-28582524)
chr2 (1-71)||(45638132-45638202)
chr2 (1-66)||(5482949-5483014)
chr2 (12-89)||(30823325-30823402)
chr2 (12-89)||(36387256-36387333)
chr2 (3-71)||(1039109-1039177)
chr2 (1-53)||(33953499-33953551)
chr2 (1-69)||(43671257-43671325)
chr2 (12-67)||(1038888-1038943)
chr2 (1-71)||(36387438-36387509)
chr2 (1-89)||(43671478-43671570)
chr2 (1-71)||(5248189-5248259)
chr2 (1-71)||(34334602-34334672)
chr2 (1-50)||(5248066-5248115)
chr2 (1-70)||(5483107-5483176)
chr2 (1-50)||(7438323-7438372)
chr2 (12-69)||(11974137-11974194)
chr2 (1-50)||(35125404-35125453)
chr2 (32-89)||(44436684-44436741)
chr2 (1-69)||(30513025-30513093)
chr2 (1-69)||(33615813-33615881)
[»] chr7 (65 HSPs)
chr7 (1-94)||(44448987-44449080)
chr7 (1-91)||(10096939-10097029)
chr7 (1-87)||(42430653-42430739)
chr7 (1-94)||(48840272-48840365)
chr7 (1-89)||(46855292-46855380)
chr7 (1-88)||(3173218-3173305)
chr7 (1-89)||(42758936-42759024)
chr7 (1-91)||(22564000-22564090)
chr7 (1-86)||(18942591-18942676)
chr7 (2-70)||(18942309-18942377)
chr7 (13-89)||(45909979-45910055)
chr7 (13-88)||(37043353-37043428)
chr7 (1-68)||(44941013-44941080)
chr7 (1-71)||(18942531-18942601)
chr7 (1-71)||(30648470-30648540)
chr7 (12-86)||(35127436-35127510)
chr7 (12-85)||(6723501-6723574)
chr7 (1-66)||(22642136-22642201)
chr7 (12-89)||(48840003-48840079)
chr7 (12-92)||(42759248-42759328)
chr7 (2-85)||(10470506-10470589)
chr7 (12-86)||(29036431-29036505)
chr7 (1-87)||(37393315-37393400)
chr7 (1-66)||(9907828-9907893)
chr7 (1-70)||(30648217-30648286)
chr7 (12-97)||(37042963-37043048)
chr7 (1-69)||(8919756-8919824)
chr7 (1-85)||(22563703-22563787)
chr7 (1-89)||(45443410-45443498)
chr7 (12-71)||(47332348-47332407)
chr7 (1-71)||(3173295-3173365)
chr7 (31-89)||(36987088-36987146)
chr7 (1-71)||(42430593-42430663)
chr7 (1-71)||(42759014-42759084)
chr7 (1-71)||(48840212-48840282)
chr7 (1-93)||(22641886-22641983)
chr7 (12-89)||(29036119-29036196)
chr7 (8-89)||(41718357-41718438)
chr7 (16-72)||(39304982-39305038)
chr7 (1-69)||(47193532-47193600)
chr7 (1-88)||(8919486-8919572)
chr7 (9-72)||(45324571-45324634)
chr7 (1-71)||(8919562-8919632)
chr7 (1-71)||(22563777-22563847)
chr7 (12-86)||(35127743-35127817)
chr7 (1-71)||(45203803-45203873)
chr7 (12-70)||(45324875-45324933)
chr7 (1-87)||(45324924-45325010)
chr7 (1-89)||(3173587-3173673)
chr7 (1-70)||(22563940-22564009)
chr7 (12-73)||(45443185-45443246)
chr7 (1-69)||(6723430-6723498)
chr7 (1-36)||(35127544-35127579)
chr7 (12-71)||(44449070-44449129)
chr7 (1-71)||(30648276-30648346)
chr7 (12-66)||(44941075-44941129)
chr7 (1-71)||(44941233-44941303)
chr7 (1-43)||(45203668-45203710)
chr7 (1-71)||(47193472-47193542)
chr7 (12-54)||(48840097-48840139)
chr7 (12-69)||(39305045-39305102)
chr7 (12-69)||(44449238-44449295)
chr7 (1-69)||(9907708-9907776)
chr7 (26-70)||(10470838-10470882)
chr7 (1-89)||(38995245-38995333)
[»] scaffold0016 (3 HSPs)
scaffold0016 (1-84)||(202279-202362)
scaffold0016 (1-71)||(202515-202585)
scaffold0016 (1-71)||(202352-202422)
[»] chr6 (16 HSPs)
chr6 (1-90)||(5985769-5985858)
chr6 (1-88)||(4799581-4799668)
chr6 (1-93)||(14942241-14942333)
chr6 (2-89)||(24012533-24012620)
chr6 (1-74)||(29134919-29134992)
chr6 (1-72)||(4799328-4799399)
chr6 (2-73)||(9049782-9049853)
chr6 (31-87)||(7858589-7858645)
chr6 (2-70)||(29134983-29135051)
chr6 (1-69)||(33041021-33041089)
chr6 (1-70)||(5985849-5985918)
chr6 (16-72)||(4997656-4997712)
chr6 (1-69)||(7858638-7858706)
chr6 (2-89)||(5986052-5986139)
chr6 (1-87)||(7675560-7675646)
chr6 (2-71)||(14942323-14942392)
[»] chr3 (63 HSPs)
chr3 (1-94)||(13657884-13657977)
chr3 (1-88)||(47220508-47220595)
chr3 (1-94)||(26997186-26997279)
chr3 (12-90)||(13712338-13712416)
chr3 (1-89)||(7515665-7515753)
chr3 (1-89)||(11871659-11871747)
chr3 (1-89)||(13712026-13712114)
chr3 (13-85)||(25147120-25147192)
chr3 (12-89)||(1771996-1772073)
chr3 (9-86)||(10820218-10820295)
chr3 (1-70)||(26997491-26997560)
chr3 (1-89)||(7515393-7515481)
chr3 (1-93)||(11871385-11871477)
chr3 (1-89)||(29777239-29777326)
chr3 (1-88)||(13658191-13658278)
chr3 (1-76)||(43122885-43122960)
chr3 (16-90)||(3750591-3750665)
chr3 (12-89)||(43122585-43122662)
chr3 (1-86)||(50293855-50293940)
chr3 (1-78)||(52212016-52212093)
chr3 (12-72)||(17579756-17579816)
chr3 (1-88)||(48517908-48517994)
chr3 (1-67)||(11218384-11218450)
chr3 (12-89)||(11218056-11218133)
chr3 (1-90)||(37148170-37148258)
chr3 (12-72)||(8112843-8112903)
chr3 (12-71)||(11218304-11218363)
chr3 (11-90)||(24098271-24098350)
chr3 (3-85)||(33623080-33623163)
chr3 (2-73)||(48382261-48382332)
chr3 (12-71)||(48517984-48518043)
chr3 (1-71)||(11871467-11871537)
chr3 (1-71)||(26997431-26997501)
chr3 (12-90)||(33623389-33623467)
chr3 (12-89)||(17580099-17580176)
chr3 (1-89)||(48381889-48381976)
chr3 (12-71)||(13712104-13712163)
chr3 (12-67)||(54924056-54924111)
chr3 (1-71)||(10820456-10820526)
chr3 (31-89)||(10820517-10820575)
chr3 (1-71)||(29777479-29777549)
chr3 (31-89)||(31324482-31324540)
chr3 (26-88)||(49122753-49122815)
chr3 (12-89)||(29231140-29231215)
chr3 (1-54)||(33623172-33623225)
chr3 (1-66)||(52211956-52212021)
chr3 (16-89)||(54923733-54923806)
chr3 (3-71)||(29777316-29777384)
chr3 (1-69)||(33623318-33623386)
chr3 (2-66)||(48518278-48518342)
chr3 (12-70)||(13657968-13658026)
chr3 (1-67)||(13712267-13712333)
chr3 (1-71)||(31324188-31324258)
chr3 (16-70)||(37148629-37148683)
chr3 (2-72)||(45147188-45147258)
chr3 (1-70)||(7515472-7515541)
chr3 (13-66)||(8112544-8112597)
chr3 (1-54)||(11218147-11218200)
chr3 (1-66)||(17580028-17580093)
chr3 (1-70)||(24097977-24098046)
chr3 (1-70)||(43122825-43122894)
chr3 (26-70)||(11218349-11218393)
chr3 (16-88)||(47220222-47220294)
[»] chr5 (50 HSPs)
chr5 (1-89)||(6641790-6641877)
chr5 (1-89)||(21250623-21250711)
chr5 (12-90)||(8943242-8943320)
chr5 (1-91)||(28574696-28574786)
chr5 (13-89)||(18008495-18008571)
chr5 (12-84)||(5361528-5361600)
chr5 (1-85)||(20429602-20429686)
chr5 (1-69)||(27319037-27319105)
chr5 (1-89)||(27495875-27495963)
chr5 (1-89)||(42091989-42092077)
chr5 (1-89)||(42092248-42092336)
chr5 (1-75)||(2796722-2796796)
chr5 (13-90)||(39804928-39805005)
chr5 (1-77)||(8942871-8942947)
chr5 (12-88)||(42375414-42375490)
chr5 (1-74)||(2802884-2802957)
chr5 (1-89)||(6642090-6642178)
chr5 (1-88)||(17849740-17849827)
chr5 (16-86)||(2796993-2797063)
chr5 (14-88)||(18008172-18008246)
chr5 (4-90)||(27318826-27318912)
chr5 (16-94)||(28571028-28571106)
chr5 (12-85)||(21250255-21250328)
chr5 (26-89)||(27496170-27496233)
chr5 (1-72)||(39805006-39805077)
chr5 (1-71)||(6642030-6642100)
chr5 (9-71)||(29440321-29440383)
chr5 (23-85)||(30103104-30103166)
chr5 (12-73)||(26006383-26006443)
chr5 (4-69)||(35171763-35171828)
chr5 (1-70)||(39805170-39805239)
chr5 (17-89)||(1069045-1069116)
chr5 (1-84)||(1737667-1737750)
chr5 (1-64)||(30004017-30004080)
chr5 (1-56)||(40807976-40808031)
chr5 (16-86)||(2803154-2803224)
chr5 (1-70)||(27318977-27319046)
chr5 (16-89)||(35171683-35171756)
chr5 (1-54)||(40807768-40807821)
chr5 (12-71)||(1737558-1737617)
chr5 (16-71)||(27495953-27496008)
chr5 (26-89)||(39805226-39805289)
chr5 (1-71)||(2802947-2803017)
chr5 (1-71)||(6641867-6641937)
chr5 (1-67)||(8943171-8943237)
chr5 (12-66)||(10223468-10223522)
chr5 (26-71)||(1069180-1069225)
chr5 (1-90)||(1069304-1069393)
chr5 (1-70)||(1737607-1737676)
chr5 (2-66)||(30004075-30004139)
[»] chr4 (70 HSPs)
chr4 (1-85)||(5322499-5322583)
chr4 (13-89)||(14336932-14337008)
chr4 (2-94)||(21956012-21956104)
chr4 (1-88)||(25154819-25154906)
chr4 (12-89)||(29031642-29031719)
chr4 (12-89)||(29043762-29043839)
chr4 (1-90)||(32751101-32751190)
chr4 (1-89)||(13846590-13846678)
chr4 (1-89)||(34979474-34979562)
chr4 (1-88)||(53856464-53856551)
chr4 (1-88)||(55358557-55358644)
chr4 (1-91)||(15631666-15631755)
chr4 (1-90)||(18598557-18598646)
chr4 (1-89)||(40289718-40289806)
chr4 (1-71)||(41898353-41898423)
chr4 (1-86)||(35779005-35779090)
chr4 (1-89)||(21956389-21956477)
chr4 (1-91)||(6112087-6112178)
chr4 (1-72)||(7632833-7632904)
chr4 (1-71)||(26553974-26554044)
chr4 (12-88)||(15631318-15631394)
chr4 (1-89)||(41898413-41898501)
chr4 (12-87)||(41898115-41898190)
chr4 (12-91)||(46430013-46430092)
chr4 (12-66)||(3253491-3253545)
chr4 (1-71)||(14336697-14336767)
chr4 (1-71)||(14966098-14966168)
chr4 (2-88)||(18598186-18598272)
chr4 (1-71)||(20421133-20421203)
chr4 (12-90)||(25363591-25363670)
chr4 (1-66)||(35778945-35779010)
chr4 (1-66)||(53856764-53856829)
chr4 (1-72)||(14336860-14336931)
chr4 (1-92)||(40998099-40998190)
chr4 (2-85)||(41511304-41511387)
chr4 (3-66)||(46429793-46429856)
chr4 (1-91)||(29031257-29031347)
chr4 (1-91)||(29043376-29043466)
chr4 (1-71)||(34979552-34979622)
chr4 (1-71)||(53856704-53856774)
chr4 (1-90)||(14336618-14336707)
chr4 (1-90)||(27389780-27389869)
chr4 (12-69)||(32751322-32751379)
chr4 (2-67)||(50523136-50523201)
chr4 (1-89)||(13870362-13870449)
chr4 (1-69)||(25363520-25363588)
chr4 (1-88)||(32557350-32557435)
chr4 (26-86)||(40289348-40289408)
chr4 (1-89)||(52850868-52850956)
chr4 (12-71)||(32751382-32751441)
chr4 (1-71)||(18598497-18598567)
chr4 (13-71)||(26553926-26553984)
chr4 (1-71)||(40998180-40998249)
chr4 (12-66)||(41898195-41898249)
chr4 (18-71)||(9860961-9861014)
chr4 (12-89)||(50523054-50523131)
chr4 (2-70)||(23159108-23159176)
chr4 (3-71)||(25154597-25154665)
chr4 (1-69)||(34508881-34508949)
chr4 (12-71)||(5322573-5322632)
chr4 (16-71)||(15631621-15631676)
chr4 (26-85)||(25154552-25154611)
chr4 (2-69)||(32557069-32557136)
chr4 (168-215)||(39078371-39078418)
chr4 (9-71)||(13870439-13870500)
chr4 (12-94)||(52851188-52851265)
chr4 (1-90)||(20421054-20421143)
chr4 (1-66)||(46429733-46429798)
chr4 (1-66)||(53856546-53856611)
chr4 (2-54)||(32557144-32557196)
[»] chr1 (57 HSPs)
chr1 (13-89)||(1695702-1695778)
chr1 (1-90)||(45721123-45721212)
chr1 (1-69)||(20492034-20492102)
chr1 (1-89)||(29987499-29987587)
chr1 (1-85)||(38823758-38823842)
chr1 (1-69)||(42371741-42371809)
chr1 (12-87)||(5739523-5739598)
chr1 (1-91)||(5739367-5739457)
chr1 (12-89)||(5277287-5277364)
chr1 (1-78)||(32712170-32712247)
chr1 (1-70)||(49113196-49113265)
chr1 (12-91)||(29987196-29987275)
chr1 (2-89)||(41810963-41811049)
chr1 (1-71)||(1695780-1695850)
chr1 (1-87)||(39833987-39834073)
chr1 (1-85)||(4764823-4764908)
chr1 (1-78)||(4974830-4974907)
chr1 (2-70)||(4965082-4965150)
chr1 (1-89)||(18030188-18030276)
chr1 (1-84)||(1102897-1102980)
chr1 (1-71)||(15615427-15615497)
chr1 (3-65)||(24025930-24025992)
chr1 (18-87)||(4765138-4765207)
chr1 (1-70)||(48074372-48074441)
chr1 (1-86)||(48074432-48074516)
chr1 (1-65)||(29386381-29386445)
chr1 (1-73)||(49588013-49588084)
chr1 (9-72)||(1102612-1102675)
chr1 (1-71)||(4974897-4974967)
chr1 (1-71)||(20491715-20491785)
chr1 (1-71)||(20491974-20492044)
chr1 (3-85)||(39834289-39834371)
chr1 (12-69)||(18088084-18088141)
chr1 (1-65)||(18030564-18030628)
chr1 (12-71)||(29987450-29987509)
chr1 (2-69)||(43142910-43142977)
chr1 (1-71)||(4764898-4764968)
chr1 (16-85)||(18088319-18088388)
chr1 (1-66)||(41810745-41810810)
chr1 (1-66)||(43142691-43142756)
chr1 (1-70)||(45721203-45721272)
chr1 (1-94)||(45721494-45721587)
chr1 (1-88)||(3339173-3339259)
chr1 (2-69)||(4964920-4964987)
chr1 (18-72)||(15615200-15615255)
chr1 (12-71)||(38823709-38823768)
chr1 (1-67)||(1102677-1102743)
chr1 (12-70)||(29386098-29386156)
chr1 (1-71)||(29386321-29386391)
chr1 (1-71)||(41810800-41810870)
chr1 (12-66)||(49588079-49588133)
chr1 (1-66)||(29386163-29386228)
chr1 (1-70)||(39834064-39834133)
chr1 (12-68)||(49588344-49588401)
chr1 (3-43)||(24025803-24025843)
chr1 (1-89)||(42371384-42371472)
chr1 (1-69)||(47824478-47824545)
[»] scaffold0182 (4 HSPs)
scaffold0182 (1-85)||(23423-23507)
scaffold0182 (12-91)||(22189-22268)
scaffold0182 (12-89)||(22474-22551)
scaffold0182 (9-67)||(22411-22469)
[»] scaffold0220 (3 HSPs)
scaffold0220 (1-93)||(22070-22162)
scaffold0220 (1-89)||(21809-21897)
scaffold0220 (12-71)||(22021-22080)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-89)||(11710-11798)
[»] scaffold0051 (4 HSPs)
scaffold0051 (1-89)||(60468-60556)
scaffold0051 (3-94)||(60746-60837)
scaffold0051 (3-71)||(60546-60614)
scaffold0051 (1-71)||(60684-60754)
[»] scaffold0121 (4 HSPs)
scaffold0121 (12-93)||(23960-24041)
scaffold0121 (2-69)||(23668-23735)
scaffold0121 (1-54)||(23743-23796)
scaffold0121 (1-69)||(23889-23957)
[»] scaffold0179 (2 HSPs)
scaffold0179 (1-61)||(32443-32502)
scaffold0179 (1-70)||(32251-32320)


Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 1043720 - 1043498
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatttcttaat 100  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1043720 cttaaaggacatatctgagaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatttcttaat 1043621  T
Q  101 caaacttcagattgtagagacattcttttcttttaaatcagatgattaagtctaaaaagcataagagaattcatcaatttagtctctaatatttcaaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  1043620 caaacttcagattgtagagacattcttttcttttaaatcagatgattaagtctaaaaagcatatgaaaattcatcaatttagtctctaatatttcaaaat 1043521  T
Q  201 gagagattaaattgaaggatttt 223  Q
    ||||||||||||||| |||||||    
T  1043520 gagagattaaattgacggatttt 1043498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24469491 - 24469579
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
T  24469491 cttaaaggacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaatttaaaggacccggggaggtatttggcct 24469579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 6121578 - 6121501
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||    
T  6121578 tatctgaaaccttagaaacttaaaggatctatctaaaacaaacatgaaacttaaaggacccggggaggtatttggcct 6121501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 23404111 - 23404192
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  23404111 acatatctgaaaccttagtaacttaaaggatctatctgagacaaacatgaaacttaaaggacccggggagatatttgacctt 23404192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9117584 - 9117497
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||| || |||||||||    
T  9117584 cttaaaggacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaagacccgggaaggtatttggcc 9117497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 22780131 - 22780053
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| ||||    
T  22780131 tatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaatgacccggggaggtatttgacctt 22780053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44728191 - 44728103
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||    
T  44728191 cttaaaggacctgtctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctggagaggtatttggcct 44728103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27702621 - 27702710
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| || |||| |||||| ||||    
T  27702621 cttaaaggacctatctgaaaccttagaaacttaaaggagctatctgaaacaaacatgaaacttaaaggactcgtggaggtatttgacctt 27702710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 28463876 - 28463803
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||    
T  28463876 tatctgaaaccttagaaacttaaaggatttatctgaaacaaacatgaaacttaaaggactcggggaggtatttg 28463803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15315181 - 15315098
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| ||||||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||    
T  15315181 cttaaaggacttatctgaaaccttagaa-tttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggagatatttg 15315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15315394 - 15315482
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||| | ||| ||||||    
T  15315394 cttaaaagacctatctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgatacttaaaggacccggggtggtatctggcct 15315482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15495550 - 15495467
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| ||||||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||    
T  15495550 cttaaaggacttatctgaaaccttagaa-tttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggagatatttg 15495467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15495763 - 15495851
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||| | ||| ||||||    
T  15495763 cttaaaagacctatctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgatacttaaaggacccggggtggtatctggcct 15495851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29218426 - 29218342
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||    
T  29218426 cttaaaggacctatctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccagggaggtatttg 29218342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38507144 - 38507060
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||| ||||| ||| |||||||| ||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||    
T  38507144 cttaaatgacctatctaaaatcttagaaacttaaaggatctatctgagacaaacatgaaacttaaaggatccggggagctatttg 38507060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24043813 - 24043724
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc-cggggagatatttggcct 89  Q
    |||||| ||| ||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||  |||||| ||||||||||    
T  24043813 cttaaaggacctatctaaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggaccttggggaggtatttggcct 24043724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 29276691 - 29276614
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| | || ||||| ||||||||||    
T  29276691 tatctgaaaccttagaaacttaaaggacctatctgaaacaaacatgaaacttaaagaatccagggaggtatttggcct 29276614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35435605 - 35435674
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  35435605 cttaaaggacctatctaaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggac 35435674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 44318514 - 44318587
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| || ||||||| ||||||    
T  44318514 tatctgaaacattagaaacttaaaggatctatttgaagcaaacatgaaacttaaagaacgcggggaggtatttg 44318587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4157659 - 4157591
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  4157659 cttaaaggacctatctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaagga 4157591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15891653 - 15891566
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| | |||||||||||||||| || |||||||||| ||||||||| ||||||||||||||||||| | || |||||||||    
T  15891653 cttaaaggacctgtctgaaaccttagaaactttaaggatctatctgaaacaaatatgaaacttaaaggacccgagaaggtatttggcc 15891566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31618439 - 31618368
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||| ||| ||| ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  31618439 cttaaaggacttatttgaaaccttagaaatttaaaggacctatctgaaacaaacgtgaaacttaaaggaccc 31618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 2251076 - 2251162
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||| |||||||||| ||||||| |||||||| |||| |||||||||| | ||||||||||||| | ||||| ||||||||||    
T  2251076 taaatgacttatctgaaactttagaaacttaaaggacctatctgaaacaaacgtaaaacttaaaggactcagggaggtatttggcct 2251162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7019 - 6942
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggag 78  Q
    |||||||||| ||| |||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||| | ||||||    
T  7019 cttaaatgacttatttgaaaccttagaaacttaaaagatatatctgaaacaaacatgaaacttaaaggatctggggag 6942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15315241 - 15315172
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||| |||||||||||||||||| |||||||| ||||  |||||||||| ||||||||||||||    
T  15315241 cttaaatgacctatctgaaaccttagaaacttaaaggacctatccgaaacaaacacgaaacttaaaggac 15315172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15495610 - 15495541
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||| |||||||||||||||||| |||||||| ||||  |||||||||| ||||||||||||||    
T  15495610 cttaaatgacctatctgaaaccttagaaacttaaaggacctatccgaaacaaacacgaaacttaaaggac 15495541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23275444 - 23275512
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| |||||||||||||||||||||| |||||||| |||| |||||||||| | ||||||||||||    
T  23275444 cttaaaggacatatctgaaaccttagaaacttaaaggacctatatgaaacaaacgttaaacttaaagga 23275512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23403770 - 23403702
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| |||||||||||||| ||||||| |||||||| ||||||||||||||| | ||||||||||||    
T  23403770 cttaaaggacatatctgaaactttagaaacttaaaggacctatttgaaacaaacgttaaacttaaagga 23403702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6121873 - 6121960
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||| ||||| ||||| |||||||||||| ||||||||  ||| |||||||||| ||||||||||||||||| | ||| |||||||||    
T  6121873 cttatatgacctatctaaaaccttagaaacttaaaggacatatctgaaacaaacgtgaaacttaaaggacccagagaggtatttggcc 6121960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9779160 - 9779243
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatattt 84  Q
    |||||| ||| |||||||||||||| ||| |||||||| |||| | |||||||||||||||||||||||||   ||||||||||    
T  9779160 cttaaaggacctatctgaaaccttaaaaacttaaaggacctatctaaaacaaacatgaaacttaaaggacctaaggagatattt 9779243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 22444986 - 22445053
Alignment:
Q  18 aaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||| ||||||    
T  22444986 aaaccttagaaacttaaaggatttatctgaaacaaacatgaaacttaaagaacctggggaggtatttg 22445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 2257134 - 2257048
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||| |||||||||| ||||||| |||||||| |||| |||||||||| | ||||||||||||| || |||| ||||| ||||    
T  2257134 taaatgacttatctgaaactttagaaacttaaaggacctatctgaaacaaacgtaaaacttaaaggactcgtggaggtatttagcct 2257048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 29276915 - 29276993
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||||||| ||||||||  ||| ||||| |||| | ||||||||||||||| ||||| |||||||||||    
T  29276915 tatctgaaaccttagaaacttaaaggacatatctgaaataaacgtaaaacttaaaggacccagggaggtatttggcctt 29276993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31827175 - 31827241
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||| |||||||||||||||||| |||||  |||||| |||||||||||||||||||||||    
T  31827175 cttaaaggacctatctgaaaccttagaaacttaaaaaatctatctgaaacaaacatgaaacttaaag 31827241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9117797 - 9117885
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| ||||||||| |||||||| |||||||| |||| |||||||||  |||||||||||||| || ||||| |||||||||||    
T  9117797 cttaaaggacttatctgaaagcttagaaacttaaaggacctatctgaaacaaatgtgaaacttaaaggatccagggag-tatttggcctt 9117885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 22444675 - 22444598
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||| ||||||| |||||||| ||||  ||||||||| ||||||||||||||||| ||||| ||||| ||||    
T  22444675 tatctgaaactttagaaacttaaaggacctatccgaaacaaacgtgaaacttaaaggacccagggaggtatttcgcct 22444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23275384 - 23275453
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||| |||||||||||||||||| |||||||| ||||  |||||||||  ||||||||||||||    
T  23275384 cttaaatgacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggac 23275453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 29457189 - 29457124
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgggga 77  Q
    ||||||||| |||||||| ||||| || |||| |||||||||||||||||||||||||| ||||||    
T  29457189 tatctgaaatcttagaaacttaaaagacctatctgaaacaaacatgaaacttaaaggactcgggga 29457124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42691978 - 42691894
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| ||||| |||||||||||| ||||||||||||||| ||||| || ||||||||||| ||||| | ||| ||||||    
T  42691978 cttaaaggacctatctaaaaccttagaaacttaaaggatctatttaaaacagacgtgaaacttaaatgacccagtgaggtatttg 42691894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2250790 - 2250703
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||| ||| |||||||| || | | ||||||||||||||||||||| || || |||| |||||||||    
T  2250790 cttaaaggacttatctgaaaccttaaaaacttaaaggacctgtataaaacaaacatgaaacttaaagaactcgaggaggtatttggcc 2250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9117644 - 9117574
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| |||||||||||||||||||||| |||||||| ||||   ||||||||  |||||||||||||||    
T  9117644 cttaaaggacatatctgaaaccttagaaacttaaaggacctatccaaaacaaactcgaaacttaaaggacc 9117574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23403891 - 23403821
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  23403891 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 23403821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31826915 - 31826845
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| | ||| |||| ||||||||||||||||    
T  31826915 cttaaaggacctatctgaaaccttagaaacttaaaggacctatctaaaataaacgtgaaacttaaaggacc 31826845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35435453 - 35435383
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||| |||||||||   |||||||||||||||    
T  35435453 cttaaaggacctatctgaaaccttagaaacttaaaagatctatctgaaacaaattcgaaacttaaaggacc 35435383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1692195 - 1692264
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| |||||||||||||||||| ||| |||||||| ||||||| ||||||  ||||| |||||||||    
T  1692195 cttaaaggacatatctgaaaccttataaacttaaaggacctatttggaacaaatgtgaaatttaaaggac 1692264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 38507307 - 38507380
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||||||||||| ||||| || |||||| |||||||| | |||||||||||| ||  |||||||||||    
T  38507307 tatctgaaaccttagaaacttaaacgacctatttaaaacaaacgttaaacttaaaggatccaaggagatatttg 38507380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44318443 - 44318508
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||  ||||||||| | |||||||||    
T  44318443 cttaaaggacctatctgaaaccttagaaatttaaaggacctatccgaaacaaacttcaaacttaaa 44318508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 2257431 - 2257507
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||||||||||| ||  |||||||| || | | |||||||||||||||||||||||| || |||| |||||||||    
T  2257431 tatctgaaaccttaaaagcttaaaggacctgtataaaacaaacatgaaacttaaaggactcgaggaggtatttggcc 2257507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 15300988 - 15301044
Alignment:
Q  29 atttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||| ||||| ||||||    
T  15300988 atttaaaggatctatttgaaataaacataaaacttaaaagacccagggaggtatttg 15301044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 15481357 - 15481413
Alignment:
Q  29 atttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||| ||||| ||||||    
T  15481357 atttaaaggatctatttgaaataaacataaaacttaaaagacccagggaggtatttg 15481413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 31618739 - 31618787
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaactta 64  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  31618739 tgaaaccttagaaacttaaaggatctatctgaaacaaacttgaaactta 31618787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1043932 - 1044019
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||||||| ||||| ||  |||   |||||||| | ||||||||||||||| || ||||||||||||    
T  1043932 cttaaaggacctatctgaaaccttagaaacttaaatgacttatcgaaaacaaacgttaaacttaaaggacccaggaagatatttggcc 1044019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 9117739 - 9117806
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||| ||| |||||||||||||||||| |||||||| ||||  |||||||||  ||||||||||||||    
T  9117739 taaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggac 9117806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15300664 - 15300577
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaa-ggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||| ||| ||||| |||| ||||||| ||||| ||| |||| ||||||||||||||||||||||| |||| | ||| ||||||||    
T  15300664 cttaaaggacctatctaaaactttagaaacttaaaaggacctatctgaaacaaacatgaaacttaaagaacccagcgaggtatttggc 15300577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15481033 - 15480946
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaa-ggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||| ||| ||||| |||| ||||||| ||||| ||| |||| ||||||||||||||||||||||| |||| | ||| ||||||||    
T  15481033 cttaaaggacctatctaaaactttagaaacttaaaaggacctatctgaaacaaacatgaaacttaaagaacccagcgaggtatttggc 15480946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 15891702 - 15891643
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||| |||||||||||| |||||||| |||| |||||||||| | ||||||||||||||    
T  15891702 tatctaaaaccttagaaacttaaaggacctatctgaaacaaacttcaaacttaaaggacc 15891643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 15891817 - 15891876
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||| |||||||||||| |||||||| |||| |||||||||| | ||||||||||||||    
T  15891817 tatctaaaaccttagaaacttaaaggacctatctgaaacaaacttcaaacttaaaggacc 15891876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15891866 - 15891965
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct-tatttcttaa 99  Q
    |||||| ||| |||||||||||||||||| ||||||||  ||| |||||||||  | |||||||||| |||| || || ||||| |||| ||||||||||    
T  15891866 cttaaaggacctatctgaaaccttagaaacttaaaggacgtatctgaaacaaatgttaaacttaaagaacccaggaaggtattttgcctatatttcttaa 15891965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15300887 - 15300957
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||  |||||||||  |||||||||||||||    
T  15300887 cttaaaggacctatctgaaaccttagaaacttaaatgaactatccgaaacaaactcgaaacttaaaggacc 15300957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15481256 - 15481326
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||  |||||||||  |||||||||||||||    
T  15481256 cttaaaggacctatctgaaaccttagaaacttaaatgaactatccgaaacaaactcgaaacttaaaggacc 15481326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24043873 - 24043803
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||| |||||||||||||| |||||||| ||||  ||||||||| | ||||||||||||||    
T  24043873 cttaaaggacctatttgaaaccttagaaacttaaaggacctatccgaaacaaacttcaaacttaaaggacc 24043803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 27702397 - 27702335
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgg 74  Q
    |||||||||||||| ||| ||||| || |||| ||||||||||||||||  ||||||||||||    
T  27702397 tatctgaaaccttaaaaacttaaaagagctatgtgaaacaaacatgaaatctaaaggacccgg 27702335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27702561 - 27702631
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||| |||||||||||||||||| | ||  |||||||||  |||||||||||||||    
T  27702561 cttaaaagacctatctgaagccttagaaatttaaaggaccgatccgaaacaaactcgaaacttaaaggacc 27702631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 42620813 - 42620871
Alignment:
Q  12 tatctgaaaccttagaaatttaaa-ggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||||||| ||| ||| ||||| |||||||| |||||||||||||||||||||||||    
T  42620813 tatctgaaactttaaaaacttaaaaggatctatctgaaacaaacatgaaacttaaagga 42620871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1691969 - 1691901
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||||||| |||||||||||||||||| ||||||||| |||   ||| ||||  |||||||||||||    
T  1691969 cttaaatgacctatctgaaaccttagaaacttaaaggatttatccaaaataaactcgaaacttaaagga 1691901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 42692146 - 42692205
Alignment:
Q  14 tctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgg 74  Q
    |||||||||||| ||| ||||| ||||||| ||||| |||||||||| |||||||||||||    
T  42692146 tctgaaaccttataaacttaaaagatctatctgaaa-aaacatgaaatttaaaggacccgg 42692205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 4157708 - 4157649
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||   ||||||||||||||    
T  4157708 tatcttaaaccttagaaatttaaaggacctatccgaaacaaactccaaacttaaaggacc 4157649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 4157876 - 4157931
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaactta 64  Q
    ||||||||||||||||| ||| |||||||| |||| |||||||||| | |||||||    
T  4157876 acatatctgaaaccttaaaaacttaaaggacctatctgaaacaaacgttaaactta 4157931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22444909 - 22444980
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||   |||||||||| ||||    
T  22444909 cttaaaggacttatctgaaaccttagaaacttaaaggacctatccgaaacaaactcaaaacttaaagaaccc 22444980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 24469438 - 24469501
Alignment:
Q  8 gacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| ||| |||||||| ||||  |||||||||   ||||||||||||||    
T  24469438 gacatatctgaaaccttaaaaacttaaaggacctatccgaaacaaactccaaacttaaaggacc 24469501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7172 - 7242
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||||||  |||   ||||||||  |||||||||||||||    
T  7172 cttaaaggacctatctgaaaccttagaaacttaaaggacatatccaaaacaaactcgaaacttaaaggacc 7242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23403831 - 23403761
Alignment:
Q  1 cttaaatgacatatctgaaa-ccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| ||||||||| ||||||||| |||||||| ||||  |||||||||  ||||||||||||||    
T  23403831 cttaaaggacctatctgaaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggac 23403761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23404043 - 23404109
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||| ||||||| ||||||||||||||||||| ||||  |||||||||  |||| ||||||    
T  23404043 cttaaaggacctatctgacaccttagaaatttaaaggacctatccgaaacaaactcgaaatttaaag 23404109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29218486 - 29218416
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||| | |||||||| |||||||||||| ||||  ||||||||| | ||||||||||||||    
T  29218486 cttaaaggacctatataaaaccttaaaaatttaaaggacctatccgaaacaaacttcaaacttaaaggacc 29218416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29276762 - 29276696
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||   ||||||||  |||||||||||    
T  29276762 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccaaaacaaactcgaaacttaaag 29276696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7079 - 7014
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||||| ||| |||||||||||||| ||||| |   ||||||||||||||  ||||||||||    
T  7079 cttaaatgacttatgtgaaaccttagaaacttaaatggaatatttgaaacaaactcgaaacttaaa 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1043780 - 1043711
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| ||||| ||  ||| ||||||||||   |||||||||||||    
T  1043780 cttaaaggacctatctgaaaccttagaaacttaaatgacatatctgaaacaaactccaaacttaaaggac 1043711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2250850 - 2250781
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    ||||||||||  |||| |||||||||||| ||| |||| ||||  |||||||||  ||||||||||||||    
T  2250850 cttaaatgaccgatctaaaaccttagaaacttacaggacctatccgaaacaaactcgaaacttaaaggac 2250781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31618663 - 31618728
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| ||||| |||| ||||||| |||||||| | |||||||||||||  ||||||||||    
T  31618663 cttaaaggacttatctaaaactttagaaacttaaaggacccatttgaaacaaactcgaaacttaaa 31618728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 4157814 - 4157874
Alignment:
Q  7 tgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    ||||||||||||||||||||||| ||||||||  |||   ||||||||  |||||||||||    
T  4157814 tgacatatctgaaaccttagaaacttaaaggacatatcccaaacaaactcgaaacttaaag 4157874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15300947 - 15300991
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctattt 45  Q
    |||||| ||| |||||||||| ||||||| |||||||||||||||    
T  15300947 cttaaaggacctatctgaaactttagaaacttaaaggatctattt 15300991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15481316 - 15481360
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctattt 45  Q
    |||||| ||| |||||||||| ||||||| |||||||||||||||    
T  15481316 cttaaaggacctatctgaaactttagaaacttaaaggatctattt 15481360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 44728421 - 44728481
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||||||||||| ||| ||||||||  | | |||||||||| ||||||||||| |||||    
T  44728421 tatctgaaaccttaaaaacttaaaggacttgtctgaaacaaacgtgaaacttaaatgaccc 44728481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15787017 - 15787109
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatt 93  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  15787017 cttaaaggacatatctgaaaccttagaaacttaaaggatctatttgaaacaaacatgaaatttaaaggacccggggaggtatttgaccttatt 15787109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34334612 - 34334524
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||    
T  34334612 cttaaatgacctatctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggactcaaggagatatttggcct 34334524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 45638142 - 45638054
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  45638142 cttaaaggacctatctgaaacgttagaaacttaaaggacctatctgaaacaaacatgaaacttaaaggacccagggagatatttggcct 45638054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45638355 - 45638444
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  45638355 cttaaaggacctatttgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctggggatgtatttggcctt 45638444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 1844538 - 1844614
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||    
T  1844538 atctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaaggacccgtgaagatatttggcct 1844614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4603771 - 4603855
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||    
T  4603771 cttaaatgacctatttgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccgggaaggtatttg 4603855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 11974001 - 11973914
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| ||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| || |||||||| ||||||||||    
T  11974001 ttaaaagacttatctgaaaccttagaaacttaaaggatttatctgaaacaaacatgaaacttaaatgatccggggaggtatttggcct 11973914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44436501 - 44436414
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||| || |||||||||    
T  44436501 cttaaaggacttatctgaaaccttagaaacttaaaggatctatctgaaaaaaacatgaaatttaaaggacccgggaaggtatttggcc 44436414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 5482943 - 5482869
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||||    
T  5482943 tatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccggagaggtatttgg 5482869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7881957 - 7882045
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||| ||||| ||||| |||||||||||||| ||||||| ||||||||||    
T  7881957 cttaaaggacctatctgaaaccttagaaacttaaatgatctatctgaaaaaaacacgaaacttaaaggactcggggaggtatttggcct 7882045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15286100 - 15286188
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||| |  ||||||||||    
T  15286100 cttaaaggacctatctgaaaccttataaacttaaaggatctatatgaaacaaacatgaaacttaaagtacccgggaatgtatttggcct 15286188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 30851144 - 30851056
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||| ||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||||    
T  30851144 cttaaaggacctatctgaaacgttaaaaacttaaaggatctatctgaaacaaatatgaaacttaaaggacccgggaaggtatttggcct 30851056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 7438466 - 7438553
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| ||| |||||||||||||||||| ||||| || |||| | |||||||| ||||||||||||||||||| ||||||||||||||    
T  7438466 ttaaaggacctatctgaaaccttagaaacttaaaagacctatctaaaacaaacgtgaaacttaaaggacccggagagatatttggcct 7438553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43865435 - 43865348
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||| ||| ||||| ||||||| |||||||||||||||| |||||||||||||| || |||||||||    
T  43865435 cttaaaggacctatctgaaaccttaaaaacttaaaagatctatctgaaacaaacatgaaatttaaaggacccgggtaggtatttggcc 43865348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 43671254 - 43671176
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    ||||| |||||||| |||||||||||| ||||||||||||||| |||||||||||||| || ||||| |||||||||||    
T  43671254 tatctaaaaccttaaaaatttaaaggacctatttgaaacaaacgtgaaacttaaaggatccagggaggtatttggcctt 43671176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 35125616 - 35125692
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||| ||| |||||||| |||||||||    
T  35125616 tatctgaaaccttagaaacttaaatgatctatgtgaaataaacatgaaacttaatggatccggggaggtatttggcc 35125692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5247997 - 5247910
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| ||||||||||||| |||| ||||| ||| ||| |||||||||||| |||||||||||| ||| ||||||||||||||    
T  5247997 cttaaaggacctatctgaaaccttcgaaacttaaatgatttatctgaaacaaacataaaacttaaaggatccgaggagatatttggcc 5247910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30851294 - 30851379
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatt-tgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||||||||||||||||||||||||  |||| |||||||||| | ||||||||||||| | ||||||||||||    
T  30851294 cttaaaggacctatctgaaaccttagaaatttaaaggacatattctgaaacaaacgttaaacttaaaggactcagggagatatttg 30851379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 33616045 - 33616118
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| || |||  ||||||||||    
T  33616045 tatctgaaaccttagaaacttaaaggatctatctaaaacaaacatgaaacttaaatgagccgaagagatatttg 33616118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 43671419 - 43671488
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||||||| |||||||||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||    
T  43671419 ttaaatgacctatctgaaaccttagaaacttaaaggacctattcgaaacaaacttcaaacttaaaggacc 43671488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28182420 - 28182496
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgggga 77  Q
    |||||| ||| ||||| |||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| ||||    
T  28182420 cttaaaagacctatctaaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccaggga 28182496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29683919 - 29684002
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||||||||||||| ||| |||| |||||| |||||| |||||||||||||||||| ||||||||| ||||| ||||||    
T  29683919 cttaaaggacatatctgaaatctt-gaaacttaaagtatctatctgaaacaaacatgaaactgaaaggaccccgggaggtatttg 29684002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 35125424 - 35125340
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||||||| ||||||| |||||||| | || |||||||||||| ||||||||||||||| ||||| ||||||    
T  35125424 cttaaaggacctatctgaaactttagaaacttaaaggaccgatctgaaacaaacattaaacttaaaggacccagggaggtatttg 35125340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28182207 - 28182137
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||| ||||||||| |||||||||||||||||| || ||||||||||||||| | |||||||||||||||    
T  28182207 cttaaaggacatatctaaaaccttagaaatttaaa-gacctatttgaaacaaacgtaaaacttaaaggaccc 28182137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5248057 - 5247987
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||||||||  ||||||||| | ||||||||||||||    
T  5248057 cttaaaggacctatctgaaaccttagaaacttaaaggatctatccgaaacaaacttcaaacttaaaggacc 5247987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5483167 - 5483236
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| ||||||||||||| |||| |||||||| |||| |||||||||| |||||||||||||||    
T  5483167 cttaaaggacttatctgaaaccttggaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggac 5483236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 28238514 - 28238425
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| ||||| |||||||||||| |||||||| |||| |||||||||| |||||||||| |||| | ||||  |||||||||||    
T  28238514 cttaaaggacttatctaaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaacggactcagggatgtatttggcctt 28238425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 30513022 - 30512949
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||| |||||||||||| |||||| |||||| ||||||||||| |||||||||||||| ||| ||| ||||||    
T  30513022 tatcttaaaccttagaaacttaaagaatctatctgaaacaaacaagaaacttaaaggactcggagaggtatttg 30512949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 30823674 - 30823751
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||||||||||| ||||| ||||||| | |||||||| | ||||||||||||| | ||||| ||||||||||    
T  30823674 tatctgaaaccttagaaaattaaatgatctatctaaaacaaacgtaaaacttaaaggactcagggaggtatttggcct 30823751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1039167 - 1039255
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||| ||||||||||||  ||||  || ||| |||||||||| ||||||||||||||||| ||||| ||||||||||    
T  1039167 cttaaaggacctatctaaaaccttagaaacctaaaaaatttatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcct 1039255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 7881688 - 7881612
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||||||||||||||||||||| |  ||||||||||||||| ||||||||||| || |  | |||||||||||||    
T  7881688 tatctgaaaccttagaaatttaaaaggcctatttgaaacaaacgtgaaacttaaatgatctagagagatatttggcc 7881612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15285876 - 15285792
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||||| ||||||||| ||| | || |||| |||||||||| ||||||||||||||||||| ||| ||||||    
T  15285876 cttaaaggacctatctgaagccttagaaacttacatgacctatctgaaacaaacctgaaacttaaaggacccggagaggtatttg 15285792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40343782 - 40343850
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  40343782 cttaaaggacctatctaaaaccttagaaattaaaaggatctaccagaaacaaacatgaaacttaaagga 40343850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42553721 - 42553813
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatt 93  Q
    |||||| ||| |||||||||||||| ||| ||||| || |||| |||||||||  ||||||||||||||| |  |||| ||||||||||||||    
T  42553721 cttaaaggacctatctgaaaccttataaacttaaatgacctatctgaaacaaatgtgaaacttaaaggacacctggaggtatttggccttatt 42553813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35125545 - 35125611
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||  |||||||||  |||||||||||    
T  35125545 cttaaaagacctatctgaaaccttagaaatttaaaggacctatccgaaacaaactcgaaacttaaag 35125611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 28238807 - 28238883
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||| |||| ||| |||||| |||||| |||||||||||||||||||||| ||| | |||| |||||||||||    
T  28238807 tatctgaaatcttaaaaacttaaag-atctatctgaaacaaacatgaaacttaaaagactcagggatatatttggcct 28238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 28582464 - 28582375
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| ||| ||||||||||||||  ||||||| | || |||||||||| ||||||||||||||||   |||| |||||||||||    
T  28582464 cttaaaggacctatatgaaaccttagaaacgtaaaggacccatctgaaacaaacgtgaaacttaaaggacctaaggaggtatttggcctt 28582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30513185 - 30513254
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| ||||||||   || |||||||||| |||||||||||||||    
T  30513185 cttaaaggacctatctgaaaccttagaaacttaaaggactcatctgaaacaaacgtgaaacttaaaggac 30513254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33953236 - 33953147
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| |||||||||| ||||||| |||||||  |||| |||||||||  ||||||||||||||||| || || |||||| ||||    
T  33953236 cttaaaagacctatctgaaactttagaaacttaaagggcctatctgaaacaaaattgaaacttaaaggaccctggaaggtatttgacctt 33953147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29683659 - 29683591
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||||||| |||||| | |||| |||||||||| ||||| ||||||||    
T  29683659 cttaaaggacctatctgaaaccttagaaacttaaagaacctatctgaaacaaacgtgaaatttaaagga 29683591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 4603528 - 4603461
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||| ||| ||||| |||||||||||| |||||||| ||||  ||||||||| ||||||||||||||    
T  4603528 ttaaaggacctatctaaaaccttagaaacttaaaggacctatccgaaacaaacgtgaaacttaaagga 4603461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 11974197 - 11974272
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||||||||||| ||| ||||| ||  ||| |||||||||| ||||||||||||||||| | ||| ||||||||    
T  11974197 tatctgaaaccttataaacttaaaagacatatctgaaacaaacgtgaaacttaaaggacccagagaggtatttggc 11974272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 33953450 - 33953509
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  33953450 tatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 33953509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28582524 - 28582454
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||||||||||| |||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  28582524 cttaaaggacctatctgaaaccatagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 28582454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45638202 - 45638132
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||| ||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  45638202 cttaaaggacctatctgaaactttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 45638132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5483014 - 5482949
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| |||||||||||||| ||| |||||||||||||  |||||||||  ||||||||||    
T  5483014 cttaaaggacttatctgaaaccttataaacttaaaggatctatccgaaacaaactcgaaacttaaa 5482949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 30823402 - 30823325
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||||||| ||| || |||||||||| | || || ||||||||||||||||| |||| ||| | ||||||||    
T  30823402 tatctgaaaccttaaaaactttaaggatctatctaaatcagacatgaaacttaaaggatccggagaggtgtttggcct 30823325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 36387333 - 36387256
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||| |||  ||| ||||||||||||| ||| ||||||||||||||||||  |||||  ||| ||||||||||    
T  36387333 tatctgaaatcttgaaaacttaaaggatctatctgacacaaacatgaaacttaaaaaacccgaagaggtatttggcct 36387256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1039109 - 1039177
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||| |||||||||| ||||||||||| ||||||||  |||  |||||||||  |||||||||||||||    
T  1039109 taaaggacatatctgtaaccttagaaacttaaaggacatatccgaaacaaactcgaaacttaaaggacc 1039177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33953499 - 33953551
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaa 53  Q
    |||||| ||| |||||||||| ||||||| ||||||||||||| |||||||||    
T  33953499 cttaaaggacctatctgaaactttagaaacttaaaggatctatctgaaacaaa 33953551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43671325 - 43671257
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||  |||||||||  |||||||||||||    
T  43671325 cttaaaagacctatctgaaaccttagaaacttaaaagacctatccgaaacaaactcgaaacttaaagga 43671257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 1038943 - 1038888
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||||||| ||| ||| ||||||||||||| ||||| |||| ||||||||||||    
T  1038943 tatctgaaactttaaaaacttaaaggatctatctgaaataaacgtgaaacttaaag 1038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 36387438 - 36387509
Alignment:
Q  1 cttaaatgacatatctgaaa-ccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||||||||||||| | ||||||| |||||||| |||| |||||||||| ||||| |||| |||||    
T  36387438 cttaaaagacatatctgaaatctttagaaacttaaaggacctatctgaaacaaacgtgaaatttaatggacc 36387509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43671478 - 43671570
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttg----aaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||| |||||||||||| ||||||||||||| |     ||| ||||||||||||||||||| |||| ||| ||||| ||||    
T  43671478 cttaaaggacctatctaaaaccttagaaacttaaaggatctatatatctaaaataaacatgaaacttaaaggatccggagaggtattttgcct 43671570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5248189 - 5248259
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  ||||||||   |||||||||| ||||    
T  5248189 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaattcgaaacttaaaagacc 5248259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34334672 - 34334602
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||| |||||||||||||||||| ||||||||  |||   ||||||||  |||||||||| ||||    
T  34334672 cttaaatgacctatctgaaaccttagaaacttaaaggacatatcccaaacaaactcgaaacttaaatgacc 34334602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5248115 - 5248066
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaac 50  Q
    |||||| ||| |||||||||||||||||| ||||||||| ||| ||||||    
T  5248115 cttaaaggacctatctgaaaccttagaaacttaaaggatttatctgaaac 5248066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5483107 - 5483176
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| ||| ||||||| |||||| |||||||| |||||| ||||||||  || |||||||||||    
T  5483107 cttaaaggacctatatgaaaccgtagaaacttaaaggacctatttaaaacaaactcgacacttaaaggac 5483176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7438372 - 7438323
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaac 50  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| ||||||    
T  7438372 cttaaaagacctatctgaaaccttagaaacttaaaggacctatctgaaac 7438323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 11974137 - 11974194
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||||||||||||||| |||||||| ||||  |||||||||  |||| ||||||||    
T  11974137 tatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaatttaaagga 11974194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35125453 - 35125404
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaac 50  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| ||||||    
T  35125453 cttaaatgacccatctgaaaccttagaaacttaaaggacctatctgaaac 35125404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 44436684 - 44436741
Alignment:
Q  32 taaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||| |||| |||||||||  ||||||||||||||||  ||||| ||||||||||    
T  44436684 taaaggacctatctgaaacaaatgtgaaacttaaaggacctagggaggtatttggcct 44436741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30513093 - 30513025
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| ||||||||||||||||||  ||||||| ||||  |||||||||   ||||||||||||    
T  30513093 cttaaaggacctatctgaaaccttagaaacataaaggacctatccgaaacaaactccaaacttaaagga 30513025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33615881 - 33615813
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| ||| |||||||||| |||||||||||| ||||  |||||||||  |||| ||||||||    
T  33615881 cttaaaggacctatatgaaaccttaaaaatttaaaggacctatccgaaacaaactcgaaatttaaagga 33615813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 44449080 - 44448987
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  44449080 cttaaaggacctatctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaatttaaaggacccggggagatatttggcctaattt 44448987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10097029 - 10096939
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || | |||||| ||||||||||||    
T  10097029 cttaaaggacttatctgaaaccttagaaatttaaaggatctatttgaaacaaacataaaacttaaatgatctggggaggtatttggcctta 10096939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42430653 - 42430739
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  42430653 cttaaaggacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccggggaggaatttggc 42430739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 48840272 - 48840365
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    |||||| ||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | | || |||||||||||||||    
T  48840272 cttaaaggacctatttgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctgagaaggtatttggccttattt 48840365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46855292 - 46855380
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||| | ||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  46855292 cttaaaggacctatctgaaacctcataaacttaaaggatctatctgaaacaaacataaaacttaaaggacccggggaggtatttggcct 46855380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3173305 - 3173218
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||  ||| |||||||||    
T  3173305 cttaaaggacctatctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccgatgaggtatttggcc 3173218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42759024 - 42758936
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| ||||| ||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||    
T  42759024 cttaaaggacctatctgaaaccttataaacttaaaagatctatctgaaacatacatgaaacttaaaggacccagggaggtatttggcct 42758936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22564000 - 22564090
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| |||||||||| | ||||||||||||| | ||||| ||||||||||||    
T  22564000 cttaaaggacttatctgaaaccttagaaacttaaaggacctatctgaaacaaacgttaaacttaaaggactcagggaggtatttggcctta 22564090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18942591 - 18942676
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||| ||| |||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||| |||| ||| |||||||    
T  18942591 cttaaaggacctatctgaaaccttataaacttaaaggatttatctgaaacaaacatgaaacttaaaggatccggagaggtatttgg 18942676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 18942377 - 18942309
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    ||||| ||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  18942377 ttaaaggacctatctgaaacctcagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggac 18942309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 45909979 - 45910055
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||| |||| ||| ||||||||||    
T  45909979 atctgaaaccttagaaacttaaaggatctatctgaaacaaatatgaaacttgaaggatccggagaggtatttggcct 45910055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 37043353 - 37043428
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||| | ||| |||||||||    
T  37043353 atctgaaactttagaaatttaaaagatctatctgaaacaaatatgaaacttaaaggacccagagaggtatttggcc 37043428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44941080 - 44941013
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagg 68  Q
    |||||||||| ||||| |||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  44941080 cttaaatgacttatcttaaaccttagaaacttaaatgatctatttaaaacaaacatgaaacttaaagg 44941013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18942531 - 18942601
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||| ||||||||| |||||||| |||||||||||||  ||||||||| ||||||||||||||||    
T  18942531 cttaaatgacctatctgaaatcttagaaacttaaaggatctatccgaaacaaacttgaaacttaaaggacc 18942601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30648470 - 30648540
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||||||||||||||||| |||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  30648470 cttaaaggacatatctgaaaccttggaaacttaaaggatctatctgacacacacatgaaacttaaaggacc 30648540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 35127510 - 35127436
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||  ||| ||| |||||||    
T  35127510 tatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttagaggattcggagaggtatttgg 35127436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 6723501 - 6723574
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||| ||||||||||||||||| ||| ||||||    
T  6723501 tatctaaaaccttagaaacttaacggatctatctgaaacaaacataaaacttaaaggacccggagaggtatttg 6723574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22642136 - 22642201
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    ||||||||||||||||||||||||||||| |||||||| || | |||||||||| |||||||||||    
T  22642136 cttaaatgacatatctgaaaccttagaaacttaaaggacctgtctgaaacaaacgtgaaacttaaa 22642201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 48840079 - 48840003
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||  ||||| ||||||||||    
T  48840079 tatctgaaaccttagaa-tttaaaggacctatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggcct 48840003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 42759248 - 42759328
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttat 92  Q
    |||||||||||||||||| ||||| || |||| ||||| |||| ||||||||||||||||| ||||| ||||||| |||||    
T  42759248 tatctgaaaccttagaaacttaaaagacctatatgaaataaacgtgaaacttaaaggacccagggaggtatttggtcttat 42759328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 10470589 - 10470506
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||| ||| |||||||||||||||||| ||||| ||||||| |||||||||||| || |||||||||||  ||||| ||||||    
T  10470589 ttaaaggacctatctgaaaccttagaaacttaaatgatctatctgaaacaaacataaatcttaaaggacctcgggaggtatttg 10470506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 29036431 - 29036505
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||||||||||||||| |||||||| ||||  ||||||||  ||||||||||||||||| ||||| |||||||    
T  29036431 tatctgaaaccttagaaacttaaaggacctatcagaaacaaatgtgaaacttaaaggaccctgggaggtatttgg 29036505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37393400 - 37393315
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||| ||| |||||||| ||||| ||| ||| ||||||||| |||||||||||||||||||||||||||| || || ||||||||    
T  37393400 cttaaaggacctatctgaa-ccttaaaaacttagaggatctatctgaaacaaacatgaaacttaaaggaccccggaaggtatttggc 37393315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9907828 - 9907893
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    ||||||| || |||||||||| ||||||| ||||||||||||| ||||| ||||||||||||||||    
T  9907828 cttaaataacctatctgaaactttagaaacttaaaggatctatctgaaataaacatgaaacttaaa 9907893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30648286 - 30648217
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| ||| |||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||    
T  30648286 cttaaaggacctatatgaaaccttagaaacttaaaggatctatctgacataaacatgaaacttaaaggac 30648217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 37043048 - 37042963
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatttctt 97  Q
    |||||||||||||||||| |||||| ||||||   |||||||||||||||||||||||||| | ||| ||||| || || ||||||    
T  37043048 tatctgaaaccttagaaacttaaagcatctatcctaaacaaacatgaaacttaaaggacccagagaggtatttcgcattgtttctt 37042963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8919756 - 8919824
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||| ||||| ||| |||||||||||||||    
T  8919756 cttaaaggacttatctgaaaccttagaaacttaaaagatctatctgaaataaatatgaaacttaaagga 8919824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22563787 - 22563703
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||||||||||||||  ||||| ||| ||| | ||| ||||||||||||||||||||| || ||||||||||    
T  22563787 cttaaaggacctatctgaaaccttagaaccttaaatgatatatctaaaataaacatgaaacttaaaggacctggagagatatttg 22563703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 45443410 - 45443498
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||| | ||| |||||||| |||| | |||||||| ||||||||||||||||| ||||  ||||||||||    
T  45443410 cttaaaggacctatctgaaacctcaaaaacttaaaggacctatctaaaacaaacgtgaaacttaaaggacccagggaagtatttggcct 45443498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 47332407 - 47332348
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| ||||| ||||||| | |||||||||||||||||||| ||||    
T  47332407 tatctgaaaccttagaaacttaaatgatctatctaaaacaaacatgaaacttaaacgacc 47332348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3173365 - 3173295
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  3173365 cttaaaggacttatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 3173295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 36987088 - 36987146
Alignment:
Q  31 ttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||| ||||||||||||||||||||||||||| | | || ||||||||||    
T  36987088 ttaaaggatctatctgaaacaaacatgaaacttaaaggacctgtgaaggtatttggcct 36987146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42430593 - 42430663
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  42430593 cttaaatgacctatcttaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 42430663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42759084 - 42759014
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||| || |||| ||||||||||  |||||||||||||||    
T  42759084 cttaaaggacctatctgaaaccttagaaacttaaatgacctatctgaaacaaactcgaaacttaaaggacc 42759014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48840212 - 48840282
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||||||||| |||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  48840212 cttaaaggacatatctaaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 48840282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22641983 - 22641886
Alignment:
Q  1 cttaaatgacatatctgaaaccttaga-----aatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatt 93  Q
    |||||| ||| ||||||||||||||||     || ||||||||| ||| ||||||||||||||||| |||||||  ||||||| ||||||| ||||||    
T  22641983 cttaaaggacctatctgaaaccttagaaacttaacttaaaggatgtatctgaaacaaacatgaaacataaaggattcggggaggtatttggtcttatt 22641886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 29036196 - 29036119
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| ||||||| |||| ||||||||| ||| ||||||||| |||||||||||||||| |||| || ||||| ||||    
T  29036196 tatctaaaacctttgaaacttaaaggatatatctgaaacaaatatgaaacttaaaggactcgggtaggtatttagcct 29036119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 41718357 - 41718438
Alignment:
Q  8 gacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||| |||||||| |||||||||| | |||| | |||||||| ||||||||||||||||  | ||| ||||||||||    
T  41718357 gacatatctaaaaccttataaatttaaagaacctatctaaaacaaacgtgaaacttaaaggacctagagaggtatttggcct 41718438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 39305038 - 39304982
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||||||| ||| |||||| |||||| |||||||||| |||||||||||||||||    
T  39305038 tgaaaccttaaaaacttaaagaatctatctgaaacaaacgtgaaacttaaaggaccc 39304982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47193532 - 47193600
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| ||||| |||||||||||| ||||| ||||||| | ||||| |||||||||||||||||    
T  47193532 cttaaaggacctatctaaaaccttagaaacttaaaagatctatctaaaacatacatgaaacttaaagga 47193600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8919572 - 8919486
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||||||| |||||||||||| |||||| || | |||||||||||  | || ||||| |||||||||    
T  8919572 cttaaaggacctatctgaaaccttagaaacttaaaggatcta-ttgaaataatcgtgaaacttaaaatatccagggaggtatttggcc 8919486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 45324634 - 45324571
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    ||||||||||||||||||||| ||||| ||  ||| |||||||||| | |||||||||||||||    
T  45324634 acatatctgaaaccttagaaacttaaacgacatatctgaaacaaacgtaaaacttaaaggaccc 45324571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8919632 - 8919562
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||| ||| ||||| || ||||  ||||||||| ||||||||||||||||    
T  8919632 cttaaaggacctatctgaaaccttaaaaacttaaaagacctatccgaaacaaacttgaaacttaaaggacc 8919562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22563847 - 22563777
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||   ||||||||||||||    
T  22563847 cttaaaagacttatctgaaaccttagaaacttaaaggacctatccgaaacaaactccaaacttaaaggacc 22563777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 35127743 - 35127817
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    ||||||| |||||||||||||||||||  ||| | |||||||| ||||||||||| ||| | ||||| |||||||    
T  35127743 tatctgataccttagaaatttaaaggacatatctaaaacaaacgtgaaacttaaaagacacagggaggtatttgg 35127817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45203803 - 45203873
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||| ||| |||||||||||||  |||||||||  |||| ||||||||||    
T  45203803 cttaaaggacctatctgaaaccttaaaaacttaaaggatctatccgaaacaaactcgaaatttaaaggacc 45203873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 45324875 - 45324933
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||||||| ||| |||||||| |||| ||||||||||  ||||||||||||||    
T  45324875 tatctgaaaccttaaaaacttaaaggacctatctgaaacaaactcgaaacttaaaggac 45324933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45324924 - 45325010
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||| ||| |||||||||| ||||||| | ||||||||||| | ||| |||||| ||||||||| ||| | ||||| ||||||||    
T  45324924 cttaaaggacttatctgaaactttagaaactcaaaggatctatctaaaagaaacataaaacttaaaagactcagggaggtatttggc 45325010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3173587 - 3173673
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| |||||| |||  | ||||||||||||||   ||| ||||||||||    
T  3173587 cttaaaggacctatctgaaaccttagaaacttaaaggacctatctgaaactaac--gtaacttaaaggacccattgaggtatttggcct 3173673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22563940 - 22564009
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| ||||||||| |||||||| |||||||| ||||  |||||||||  ||||||||||||||    
T  22563940 cttaaaggacctatctgaaatcttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggac 22564009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 45443246 - 45443185
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccg 73  Q
    |||||||||||||| ||| ||||| ||| ||| ||||||| ||||||||||||||| |||||    
T  45443246 tatctgaaaccttaaaaacttaaatgatttatctgaaacagacatgaaacttaaagaacccg 45443185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6723430 - 6723498
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| ||| |||||||||||||| |||||||| ||||  |||||||||  |||||||||||||    
T  6723430 cttaaaggacctatttgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaagga 6723498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 35127579 - 35127544
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaag 36  Q
    |||||||||| |||||||||||||||||||||||||    
T  35127579 cttaaatgacctatctgaaaccttagaaatttaaag 35127544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 44449129 - 44449070
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| ||||||||  |||  |||||||||  |||||||||||||||    
T  44449129 tatctgaaaccttagaaacttaaaggacttatccgaaacaaactcgaaacttaaaggacc 44449070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30648346 - 30648276
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||  ||||||||  |||  |||||||||  |||||||||||||||    
T  30648346 cttaaaggacttatctgaaaccttagaagcttaaaggacttatccgaaacaaactcgaaacttaaaggacc 30648276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 44941129 - 44941075
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||||||||||||| |||||||||||||  |||| |||| | |||||||||    
T  44941129 tatctgaaaccttagaaacttaaaggatctatccgaaataaacttcaaacttaaa 44941075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44941233 - 44941303
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||||||||| |||||||| |||||||| ||||   ||||||||  |||||||||||||||    
T  44941233 cttaaaggacttatctgaaatcttagaaacttaaaggacctatccaaaacaaactcgaaacttaaaggacc 44941303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45203710 - 45203668
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctat 43  Q
    |||||| ||| |||||||||||||||||| |||||||||||||    
T  45203710 cttaaaagacctatctgaaaccttagaaacttaaaggatctat 45203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47193472 - 47193542
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||||| |||||||||||| || ||||||||||  |||| ||||  |||||||||||||||    
T  47193472 cttaaaggacctatctaaaaccttagaaacttgaaggatctatccgaaataaactcgaaacttaaaggacc 47193542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 48840139 - 48840097
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaac 54  Q
    |||||||||||||||||| |||||||||||||  |||||||||    
T  48840139 tatctgaaaccttagaaacttaaaggatctatccgaaacaaac 48840097  T

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Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 39305102 - 39305045
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||| ||||||||||||  ||||||||||||  |||||||||  |||||||||||||    
T  39305102 tatctcaaaccttagaaacgtaaaggatctatccgaaacaaactcgaaacttaaagga 39305045  T

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Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 44449238 - 44449295
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||| ||||||||||||||||||||| |||| |  ||||||| | ||||||||||||    
T  44449238 tatctaaaaccttagaaatttaaaggacctatctagaacaaacgtaaaacttaaagga 44449295  T

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Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9907708 - 9907776
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||||||| ||||||||  |||  |||| |||| | ||||||||||||    
T  9907708 cttaaaggacctatctgaaaccttagaaacttaaaggacttatccgaaataaacttcaaacttaaagga 9907776  T

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Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 10470838 - 10470882
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||| |||||||| |||| |||||||||| |||||||||||||||    
T  10470838 gaaagttaaaggacctatctgaaacaaacgtgaaacttaaaggac 10470882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38995245 - 38995333
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| |||||||| |||  | |||||||  | |||||||||||| || | ||| ||||||||||    
T  38995245 cttaaaggacttatctgaaaccttaaaaacttaaaggacctaactaaaacaaatgttaaacttaaaggatccagagaggtatttggcct 38995333  T

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Target: scaffold0016 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 202362 - 202279
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatattt 84  Q
    |||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  202362 cttaaaggacctatctgaaatcttagaaacttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggaggtattt 202279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 202515 - 202585
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||||||||  |||||||||  |||||||||||||||    
T  202515 cttaaaggacctatctgaaaccttagaaacttaaaggatctatccgaaacaaactcgaaacttaaaggacc 202585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 202422 - 202352
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||  |||||||||   ||||||||||||||    
T  202422 cttaaaggacctatctgaaaccttagaaacttaaaagacctatccgaaacaaactccaaacttaaaggacc 202352  T

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Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5985858 - 5985769
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||| ||||    
T  5985858 cttaaaggacatatctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttgacctt 5985769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4799581 - 4799668
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||  ||||||| |||||||||    
T  4799581 cttaaaggacatatctgaaaccttagaaacttaaatgatctatctgaaacaaacatgaaacttaaaggaatcggggaggtatttggcc 4799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 14942333 - 14942241
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatt 93  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||   ||| ||||||||||||||    
T  14942333 cttaaaggacctatctgaaaccttagaaatttaaaggatctatctaaaacaaacgtgaaacttaaaggacccaaagaggtatttggccttatt 14942241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 24012533 - 24012620
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| ||| |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| | || ||||||||||    
T  24012533 ttaaaggacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaaggacccgagtaggtatttggcct 24012620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29134992 - 29134919
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgg 74  Q
    |||||| ||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  29134992 cttaaaggacatatttgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccgg 29134919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4799399 - 4799328
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  4799399 cttaaaggacatatctgaaactttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaaggaccc 4799328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 9049782 - 9049853
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccg 73  Q
    ||||| ||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  9049782 ttaaaggacctatccgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccg 9049853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 7858645 - 7858589
Alignment:
Q  31 ttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  7858645 ttaaaggatctatctgaaacaaacatgaaacttaaatgacccggggaggtatttggc 7858589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 29135051 - 29134983
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    ||||||||| |||||||||| ||||||| |||||||||||||  |||||||||  ||||||||||||||    
T  29135051 ttaaatgacctatctgaaactttagaaacttaaaggatctatccgaaacaaactcgaaacttaaaggac 29134983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33041021 - 33041089
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||| ||| |||||||| |||| |||||||||| ||||||||||||||    
T  33041021 cttaaaggacctatctgaaaccttacaaacttaaaggacctatctgaaacaaacgtgaaacttaaagga 33041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5985918 - 5985849
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  ||||||||| | |||||||||||||    
T  5985918 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaacttaaaacttaaaggac 5985849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 4997712 - 4997656
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||||||| ||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  4997712 tgaaaccttaaaaacttaaaggatttatttaaaacaaacgtgaaacttaaaggaccc 4997656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7858706 - 7858638
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||||||||  ||||||||||||||||| |||||||| ||||  ||||||||| | ||||||||||||    
T  7858706 cttaaatgactcatctgaaaccttagaaacttaaaggaactatccgaaacaaacttcaaacttaaagga 7858638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 5986052 - 5986139
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| ||| ||||| |||||||||||| |||||| || ||| ||||| ||| ||||||||||||||| | |||||| ||||| ||||    
T  5986052 ttaaaggacctatctaaaaccttagaaacttaaagaatttatctgaaataaatatgaaacttaaaggatctggggaggtatttagcct 5986139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7675646 - 7675560
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatc-tatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||| ||| |||||||||||||| ||| |||||| ||| |||  ||||||||| ||||||||||||||| |  |||||||||||||    
T  7675646 cttaaaggacctatctgaaaccttaaaaacttaaag-atcatatcggaaacaaacgtgaaacttaaaggactcatggagatatttggc 7675560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 14942392 - 14942323
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||||||  |||||||||||||||||| ||||||||  |||  |||||||||  ||| |||||||||||    
T  14942392 ttaaatgatctatctgaaaccttagaaacttaaaggacatatacgaaacaaactcgaatcttaaaggacc 14942323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13657977 - 13657884
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  13657977 cttaaaggacttatctgaaaccttagaaacttaaatgatctatctgaaacaaacatgaaacttaaagtacccggggaggtatttggcctaattt 13657884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47220508 - 47220595
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||||||||| |||||||||||| ||||||||||||| | |||||||||||||||||||| || ||||||||||||||||||    
T  47220508 cttaaaggacatatctaaaaccttagaaacttaaaggatctatcttaaacaaacatgaaacttaaacgatccggggagatatttggcc 47220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26997279 - 26997186
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    |||||| ||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||    
T  26997279 cttaaaggacatatcttaaaccctagaaacttaaaggacctatttgaaacaaacatgaaacttaaaggacctagggaggtatttggcctaattt 26997186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 13712338 - 13712416
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||||||| |||||||| |||| |||||||||| |||||||||||||||||  ||||||||||||||||    
T  13712338 tatctgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccatggagatatttggcctt 13712416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7515665 - 7515753
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| |||||||||||||||||||||| |||||| |||||||| |||||||| ||||| ||||| ||||||| ||||||||| ||||    
T  7515665 cttaaaggacatatctgaaaccttagaaacttaaagaatctatttaaaacaaacgtgaaatttaaaagacccggagagatatttagcct 7515753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11871659 - 11871747
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||| ||| ||| ||||||||||||| ||||||||||    
T  11871659 cttaaaggacctatctgaaaccttataaacttaaaggatctatctgaaacaaacataaaatttataggacccggggaggtatttggcct 11871747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13712114 - 13712026
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||| |||||| ||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  13712114 cttaaaggacctatttgaaactttagaaacttaaaggatttatctgaaacaaacataaaacttaaaggacccggggaggtatttggcct 13712026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 25147192 - 25147120
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  25147192 atctgaaaccttagaaacttaaatgatctatctgaaacaaacatgaaacttaaaagacccggggaggtatttg 25147120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 1771996 - 1772073
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| | ||| ||||||||||    
T  1771996 tatctgaaaccttagaaacttaaaggacctatatgaaacaaacgtgaaacttaaaggacccagtgaggtatttggcct 1772073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 10820295 - 10820218
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||  |||| |||||||    
T  10820295 acatatctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaaggatccaaggaggtatttgg 10820218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26997491 - 26997560
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  26997491 cttaaaggacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacatggaacttaaaggac 26997560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7515481 - 7515393
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||| ||||||| |||||||| |||| |||||||||| ||||||||||||||||  ||||| ||||||||||    
T  7515481 cttaaaggacttatctgaaactttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggcct 7515393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11871477 - 11871385
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatt 93  Q
    |||||| ||| ||||||||||||| |||| |||||||| |||| ||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  11871477 cttaaaggacctatctgaaaccttggaaacttaaaggacctatctgaaacagacgtgaaacttaaaggacccagggaggtatttgaccttatt 11871385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29777326 - 29777239
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||| |||||||||||||| ||||||||||||| |||||||||||| |||| |||||||||| ||||| ||||||||||    
T  29777326 cttaaaggacctatatgaaaccttagaaacttaaaggatctatctgaaacaaacataaaacgtaaaggaccc-gggaggtatttggcct 29777239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13658191 - 13658278
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||||||||||| ||||||||  ||| |||||||||||| ||| ||||||||||| ||||| |||||||||    
T  13658191 cttaaaggacctatctgaaaccttagaaacttaaaggacttatatgaaacaaacattaaatttaaaggacccagggaggtatttggcc 13658278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43122885 - 43122960
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgggg 76  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||| |||||    
T  43122885 cttaaaggacttatctgaaaccttagaaacttaaacgatctatctgaaaaaaacatgaaacttaaaggactcgggg 43122960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 3750665 - 3750591
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| ||||| ||| |||||||    
T  3750665 tgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatctggcctt 3750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 43122662 - 43122585
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||||||| ||| ||||||| ||||| |||||||||| ||||||||||||||||| || || ||||||||||    
T  43122662 tatctgaaaccttaaaaacttaaagggtctatctgaaacaaacgtgaaacttaaaggaccctggaaggtatttggcct 43122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50293855 - 50293940
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| |||||||||||| ||||||| ||||||||  ||| |||||||    
T  50293855 cttaaaggacctatctgaaaccttaaaaacttaaaggatctatctgaaacaaacataaaacttataggacccgaagaggtatttgg 50293940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 52212016 - 52212093
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggag 78  Q
    ||||||||||  ||||||||||||||||| |||||||||||||   | |||||||||||||||||| |||||||||||    
T  52212016 cttaaatgactcatctgaaaccttagaaacttaaaggatctatcccagacaaacatgaaacttaaatgacccggggag 52212093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 17579816 - 17579756
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||||    
T  17579816 tatctgaaaccttagaaacttaaagaacctatctgaaacaaacatgaaacttaaaggaccc 17579756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48517994 - 48517908
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| ||||| |||||||||||| ||||||||||||| | |||||||||||||||||| |||| || ||||| |||||||||    
T  48517994 cttaaaggacctatctaaaaccttagaaacttaaaggatctatctaaaacaaacatgaaacttagagga-cctgggaggtatttggcc 48517908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11218384 - 11218450
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||||| | |||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  11218384 cttaaaggacatgtttgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaag 11218450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 11218133 - 11218056
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| |||||||||||| |||||||| |||| |||||||||||| ||||||||| |||||  |||| ||||||||||    
T  11218133 tatctaaaaccttagaaacttaaaggacctatctgaaacaaacataaaacttaaatgacccatggaggtatttggcct 11218056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37148258 - 37148170
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| ||  ||||||||||||||| |||||||| ||| | |||||||||||    
T  37148258 cttaaaggacctatctgaaaccttagaaacttaaaggacctatctgttacaaacatgaaactt-aaggacccagggtggtatttggcctt 37148170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 8112843 - 8112903
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    ||||||||||||||||||||||||||| |||| | |||||||| |||||||||| ||||||    
T  8112843 tatctgaaaccttagaaatttaaaggacctatctaaaacaaacgtgaaacttaagggaccc 8112903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 11218304 - 11218363
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| ||||||||  ||| |||||||||| ||||||||||||||||    
T  11218304 tatctgaaaccttagaaacttaaaggacttatctgaaacaaacttgaaacttaaaggacc 11218363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 24098271 - 24098350
Alignment:
Q  11 atatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| |||| ||||||| |||||||| |||| |||||||||| ||||||||||||||||| | ||| |||||| ||||    
T  24098271 atatctaaaactttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagagaggtatttgacctt 24098350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 33623163 - 33623080
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttg-aaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||| ||| |||||||||||||||||| ||||||||| ||| || ||| ||||||||||||||||||| | |||||| ||||||    
T  33623163 taaaagacctatctgaaaccttagaaacttaaaggatttatctgaaaaaaaacatgaaacttaaaggatcaggggagttatttg 33623080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 48382261 - 48382332
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccg 73  Q
    ||||| ||| ||||| |||||||||||| ||||| ||||||| ||||||||| |||||||||||| ||||||    
T  48382261 ttaaaggacttatctaaaaccttagaaacttaaatgatctatctgaaacaaatatgaaacttaaaagacccg 48382332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 48518043 - 48517984
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||||||||||||||||||||||||| ||||  |||||||||  |||||||||||||||    
T  48518043 tatctgaaaccttagaaatttaaaggacctatccgaaacaaactcgaaacttaaaggacc 48517984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11871537 - 11871467
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  11871537 cttaaaagacctatctgaaaccttagaaacttaaaggacctatacgaaacaaactcgaaacttaaaggacc 11871467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26997431 - 26997501
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||   |||||||||| ||||||||||||||    
T  26997431 cttaaatgacctatttgaaaccttagaaacttaaaggacctatccaaaacaaacatcaaacttaaaggacc 26997501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 33623389 - 33623467
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||||||| |||||||| |||| | ||||| || |||||||||||||| || ||||| |||||| ||||    
T  33623389 tatctgaaaccttagaaacttaaaggacctatctaaaacagacgtgaaacttaaaggatccagggaggtatttgacctt 33623467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 17580099 - 17580176
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| |||||||||||| |||||  |||||| | |||||||||| ||| |||||||| |||||||| ||||||||||    
T  17580099 tatctaaaaccttagaaacttaaaaaatctatctaaaacaaacataaaatttaaaggatccggggaggtatttggcct 17580176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48381976 - 48381889
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||  ||||| |||||||| ||| |||| |||||||| |||||||||| ||||||||||| || ||||  |||||||||||||    
T  48381976 cttaaatgatctatctaaaaccttaaaaacttaa-ggatctatctgaaacaaacgtgaaacttaaaagatccggatagatatttggcct 48381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 13712163 - 13712104
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| |||||||| ||||| ||||||||| |  |||||||||||||    
T  13712163 tatctgaaaccttagaaacttaaaggacctattcgaaacaaacttccaacttaaaggacc 13712104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 54924056 - 54924111
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||||||||||| |||||||||| ||||||| |||||||||  |||||||||||    
T  54924056 tatctgaaaccttataaatttaaagaatctattcgaaacaaactcgaaacttaaag 54924111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10820456 - 10820526
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||   |||||||| | ||||||||||||||    
T  10820456 cttaaaggacttatctgaaaccttagaaacttaaaggacctatccaaaacaaacttcaaacttaaaggacc 10820526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 10820517 - 10820575
Alignment:
Q  31 ttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||| |||| ||||||||||||||||||||||||| ||| | || ||||||||||    
T  10820517 ttaaaggacctatctgaaacaaacatgaaacttaaaggatccgagaaggtatttggcct 10820575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29777479 - 29777549
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||| ||||| |||||||||||| ||||||||| |||  |||||||||  |||||||||| ||||    
T  29777479 cttaaatgacctatctaaaaccttagaaacttaaaggatatatccgaaacaaactcgaaacttaaatgacc 29777549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 31324482 - 31324540
Alignment:
Q  31 ttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||| |||| |||||||||| ||||||||||||||||  ||||| ||||||||||    
T  31324482 ttaaaggacctatctgaaacaaacgtgaaacttaaaggaccaagggaggtatttggcct 31324540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 49122815 - 49122753
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||||||| ||||||| |||||||||||| ||| |||||||| |||||||  |||||||||    
T  49122815 gaaatttaaaagatctatctgaaacaaacataaaatttaaaggatccggggaagtatttggcc 49122753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 29231140 - 29231215
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||| ||||||| |||||  |||||| |||| ||||||||||||||||| || |||||||| ||||||||||    
T  29231140 tatctgaaacattagaaacttaaaa-atctatctgaa-caaacatgaaacttaaaagatccggggagttatttggcct 29231215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33623225 - 33623172
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaac 54  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||| |||||||||    
T  33623225 cttaaaggacctatctgaaaccttagaaacttaaaggacctattcgaaacaaac 33623172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 52211956 - 52212021
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||  ||||||||||    
T  52211956 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaa 52212021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 54923806 - 54923733
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||||||||||||||||| |||||||| | |||||||||| | || | ||||||||| ||||    
T  54923806 tgaaactttaaaaatttaaaggatctatttaaaacaaacgtaaaacttaaagaatccagagagatatttagcct 54923733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 29777384 - 29777316
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||| ||| |||||||||||||||||| |||||||| ||||  |||||||||   ||||||||||||||    
T  29777384 taaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactccaaacttaaaggacc 29777316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33623318 - 33623386
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||||||| ||||||||| |||||||| ||||||||  |||  |||||||||  |||||||||||||    
T  33623318 cttaaatgacctatctgaaatcttagaaacttaaaggacatatccgaaacaaactcgaaacttaaagga 33623386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 48518278 - 48518342
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    ||||| |||||||||||||||||| ||| |||||| |  ||| |||||||||| |||||||||||    
T  48518278 ttaaaggacatatctgaaaccttaaaaacttaaagaacttatctgaaacaaacgtgaaacttaaa 48518342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 13658026 - 13657968
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    ||||||||||||||||||  ||||||| |||| ||||||||||   |||||||||||||    
T  13658026 tatctgaaaccttagaaacctaaaggacctatctgaaacaaactccaaacttaaaggac 13657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13712267 - 13712333
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||| |||||||||||||| ||| |||||||| ||||  |||||||||  |||||||||||    
T  13712267 cttaaaggacctatctgaaaccttaaaaacttaaaggacctatccgaaacaaactcgaaacttaaag 13712333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31324258 - 31324188
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||   ||||||||| ||||    
T  31324258 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaacccaaaacttaaatgacc 31324188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 37148629 - 37148683
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||||||| ||||||||||||  ||  |||||| |||||||||||||||    
T  37148629 tgaaaccttagaaacttaaaggatctaactgttacaaacgtgaaacttaaaggac 37148683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 45147188 - 45147258
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    ||||| ||| |||||  ||||||||||||||||| || |||| ||||| |||| ||||| |||||||||||    
T  45147188 ttaaaagacttatctataaccttagaaatttaaaagacctatctgaaataaacgtgaaatttaaaggaccc 45147258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7515541 - 7515472
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||| ||||||||||||| |||||||| ||||  |||||||||   |||||||||||||    
T  7515541 cttaaaggacctatccgaaaccttagaaacttaaaggacctatccgaaacaaactcaaaacttaaaggac 7515472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 8112597 - 8112544
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||| |||||||| ||| ||||| ||||||| | ||||||||||||||||||||    
T  8112597 atctaaaaccttaaaaacttaaatgatctatctaaaacaaacatgaaacttaaa 8112544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11218200 - 11218147
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaac 54  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||  |||||||||    
T  11218200 cttaaatgacttatccgaaaccttagaaacttaaaggatttatccgaaacaaac 11218147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17580028 - 17580093
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| |||||||||||||||||| |||||| ||||||  |||| ||||  ||||||||||    
T  17580028 cttaaaggacctatctgaaaccttagaaacttaaagaatctatccgaaataaactcgaaacttaaa 17580093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24098046 - 24097977
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||| ||||   |||||||||||||    
T  24098046 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaataaactccaaacttaaaggac 24097977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43122825 - 43122894
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||  |||||||||   |||||||||||||    
T  43122825 cttaaaggacctatctgaaaccttagaaacttaaatgacctatccgaaacaaactacaaacttaaaggac 43122894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 11218349 - 11218393
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||| |||||||| |||| |||||||||| |||||||||||||||    
T  11218349 gaaacttaaaggacctatctgaaacaaacttgaaacttaaaggac 11218393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 47220294 - 47220222
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||||||| |||||| | |||| | |||||||| |||||||||||| |||| | ||| |||||||||    
T  47220294 tgaaactttagaaacttaaagaacctatcttaaacaaacgtgaaacttaaagaacccagagaggtatttggcc 47220222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6641877 - 6641790
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  6641877 cttaaaggacctatctgaaatcttagaaacttaaaggatctatctgaaacaaacatgaaactt-aaggacccggggagatatttggcct 6641790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21250623 - 21250711
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |  ||||||||||    
T  21250623 cttaaatgacctatctaaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacccgggaatgtatttggcct 21250711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8943242 - 8943320
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||||    
T  8943242 tatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaactaaaaggacccggggaggtatttgtcctt 8943320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28574696 - 28574786
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| |||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||| || ||||||||||||    
T  28574696 cttaaaggacctatctgaaaccttagaaacttaaaagatctatctgaaacaaatatgaaacttaaaggacccgggaaggtatttggcctta 28574786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 18008495 - 18008571
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  18008495 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggactcggggaggtatttggcct 18008571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 5361528 - 5361600
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatattt 84  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  5361528 tatctgaaaccttagaaacttaaatgatctatctgaaacaaacatgcaacttaaaggacccggggaggtattt 5361600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20429686 - 20429602
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||| ||||||    
T  20429686 cttaaaggacctatctgcaaccttagaaacttaaaggatctattttaaacaaacatgaaacttaaaagatccggggaggtatttg 20429602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27319037 - 27319105
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  27319037 cttaaaggacttatctgaaaccttagaaatttaaaggatctatctgaaacaaacataaaacttaaagga 27319105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27495963 - 27495875
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||| |||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||| ||||| ||||    
T  27495963 cttaaaggacctatttgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccggggaggtatttagcct 27495875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42092077 - 42091989
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||||||| |||||||| |||||||| |||| |||||||||| ||||||||||||||||| ||||| ||||||||||    
T  42092077 cttaaaggacctatctgaaatcttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcct 42091989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42092248 - 42092336
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||  |||||||| ||||| ||||    
T  42092248 cttaaaagacctatctgaaaccttagaaacttaaaggatctatctaaaacaaacatgaaacttaaaggctccggggaggtatttcgcct 42092336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2796796 - 2796722
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggg 75  Q
    |||||| ||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  2796796 cttaaaggacctatctaaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaagaacccggg 2796722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 39805005 - 39804928
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | | |||| ||||| |||||    
T  39805005 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggatctgaggaggtatttagcctt 39804928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8942947 - 8942871
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgggga 77  Q
    |||||| ||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| ||||    
T  8942947 cttaaaagacctatatgaaaccttagaaacttaaaggacctatatgaaacaaacatgaaacttaaaggacccaggga 8942871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 42375490 - 42375414
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||| |||||| ||| |||||||||    
T  42375490 tatctgaaaccttaaaaatttaaaggatatatcttaaacaaacatgaaacttaaagaacccggagaggtatttggcc 42375414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2802957 - 2802884
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccgg 74  Q
    |||||| ||| ||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  2802957 cttaaaggacctatctaaaaccttagaaacttaaaagatctatctgaaacaaacatgaaacttaaagaacccgg 2802884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6642090 - 6642178
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| | |||||||| || ||||||||||||||  |||| ||||||||||    
T  6642090 cttaaaggacctatctgaaaccttagaaacttaaaggacctatctaaaacaaacgtggaacttaaaggacccaaggaggtatttggcct 6642178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17849740 - 17849827
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| |||||||||| ||||||| ||||| ||||||| ||||| ||| ||||||||||||||||||| |||  |||||||||    
T  17849740 cttaaaggacctatctgaaactttagaaacttaaacgatctatctgaaataaatatgaaacttaaaggacccgaggatgtatttggcc 17849827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 2796993 - 2797063
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| || || |||||||    
T  2796993 tgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccaggaaggtatttgg 2797063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 18008246 - 18008172
Alignment:
Q  14 tctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||||| |||||||||||||||| |||| |||||||||| |||||||||||||| || || || |||||||||    
T  18008246 tctgaaactttagaaatttaaaggacctatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttggcc 18008172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 27318912 - 27318826
Alignment:
Q  4 aaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    ||||||| |||||||||||||| ||| ||||||||  |||||||||||||| | | ||||||||||||| ||||| |||||| ||||    
T  27318912 aaatgacctatctgaaaccttataaacttaaaggacatatttgaaacaaacgttagacttaaaggacccagggaggtatttgacctt 27318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 28571106 - 28571028
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    ||||| |||||||| |||||||| |||| |||||||||| |||||||||||||| |||||||| ||||| |||| ||||    
T  28571106 tgaaagcttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggatccggggaggtatttagcctaattt 28571028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 21250328 - 21250255
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||||||||||||||| || ||||| |||| |||||||||| ||||||||||||||| | ||||| ||||||    
T  21250328 tatctgaaaccttagaaactttaaggacctatctgaaacaaacctgaaacttaaaggacacagggaggtatttg 21250255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 27496170 - 27496233
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||| |||||||| |||| |||||||||| ||||||||||||||||| ||||| ||||||||||    
T  27496170 gaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcct 27496233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39805077 - 39805006
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  ||||||||| | |||||||||||||||    
T  39805077 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaacttcaaacttaaaggaccc 39805006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6642030 - 6642100
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  6642030 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 6642100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 29440321 - 29440383
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||||||||||||||| ||| ||||||||||||| | ||||||| |||||||||||| ||||    
T  29440321 acatatctgaaaccttaaaaacttaaaggatctatctaaaacaaatatgaaacttaaaagacc 29440383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 30103166 - 30103104
Alignment:
Q  23 ttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||||| ||||||||||| | |||||||||||||||| |||||||| ||||||| |||||||    
T  30103166 ttagaaacttaaaggatctgtctgaaacaaacatgaaatttaaaggatccggggatatatttg 30103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 26006383 - 26006443
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccg 73  Q
    ||||| |||||||||||| |||||  |||||| |||||||||||||||||||||||||||||    
T  26006383 tatctaaaaccttagaaacttaaaa-atctatctgaaacaaacatgaaacttaaaggacccg 26006443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 35171828 - 35171763
Alignment:
Q  4 aaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||||| |||||||||||||| |||||||||||||||||   ||||||| | |||||||||||||    
T  35171828 aaatgacttatctgaaaccttaaaaatttaaaggatctatccaaaacaaatacgaaacttaaagga 35171763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39805170 - 39805239
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||| ||||| |||||||||||| |||||||| ||||  |||||||||  ||||||||||||||    
T  39805170 cttaaatgacctatctaaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggac 39805239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 1069116 - 1069045
Alignment:
Q  17 gaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||| ||||||||||||| ||| |||||||| ||| ||||| ||||| ||||| ||||||||||    
T  1069116 gaaaccttagaaacttaaaggatctatctgagacaaacataaaatttaaaagaccc-gggaggtatttggcct 1069045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1737667 - 1737750
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatattt 84  Q
    |||||| ||| |||||||||||||| ||| | ||| ||||||| | | ||||||||||||||||||| ||||||| || |||||    
T  1737667 cttaaaggacttatctgaaaccttaaaaactgaaatgatctatctaagacaaacatgaaacttaaagaacccgggcaggtattt 1737750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30004080 - 30004017
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaactta 64  Q
    |||||||||||||||| |||||||| ||| |||||||| |||| |||||||||| | |||||||    
T  30004080 cttaaatgacatatctaaaaccttaaaaacttaaaggacctatctgaaacaaacgtaaaactta 30004017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40807976 - 40808031
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacat 56  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| ||||| ||||||    
T  40807976 cttaaaggacctatctgaaaccttagaaagttaaaggatctatctgaaataaacat 40808031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 2803154 - 2803224
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||||||||||| ||||||||  ||| |||||||||| |||||||||||||| || || || |||||||    
T  2803154 tgaaaccttagaaacttaaaggacatatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttgg 2803224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27318977 - 27319046
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||  ||||||||| | |||||||||||||    
T  27318977 cttaaaggacctatctgaaaccttagaaacttaaaagacctatccgaaacaaacttcaaacttaaaggac 27319046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 35171756 - 35171683
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| |||||||||||||||||  ||| |||||||||| ||||| |||||| | |||| ||| ||||||||||    
T  35171756 tgaaatcttagaaatttaaaggacatatctgaaacaaacgtgaaatttaaagaatccggagaggtatttggcct 35171683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40807821 - 40807768
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaac 54  Q
    |||||| ||| |||||||||||||||||| ||||||||| ||| ||||||||||    
T  40807821 cttaaaggacttatctgaaaccttagaaacttaaaggatttatctgaaacaaac 40807768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 1737558 - 1737617
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| |||||||| ||||  |||||||||   ||||||||||||||    
T  1737558 tatctgaaaccttagaaacttaaaggacctatcagaaacaaactccaaacttaaaggacc 1737617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 27496008 - 27495953
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||||||| |||| |||||||||||||| ||||||||  | ||||||||||||||    
T  27496008 tgaaacctttgaaacttaaaggatctattcgaaacaaatttcaaacttaaaggacc 27495953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 39805226 - 39805289
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||| ||||||||  ||| |||||||||| ||||||||||||||||  ||||| ||||||||||    
T  39805226 gaaacttaaaggacttatctgaaacaaacgtgaaacttaaaggacctagggaggtatttggcct 39805289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2803017 - 2802947
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||| ||| |||||||| ||||  |||||||||   ||||||||||||||    
T  2803017 cttaaaggacctatctgaaaccttaaaaacttaaaggacctatccgaaacaaactccaaacttaaaggacc 2802947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6641937 - 6641867
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||| ||||| |||||||| ||||||| |||||  ||||||||| | ||||||||||||||    
T  6641937 cttaaaggacctatgtgaaatcttagaaacttaaagggtctatccgaaacaaacttcaaacttaaaggacc 6641867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8943171 - 8943237
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||| |||||||||||||| ||| ||||| || ||||||| |||||||  |||||||||||    
T  8943171 cttaaaggacttatctgaaaccttataaacttaaatgacctatttggaacaaactcgaaacttaaag 8943237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 10223522 - 10223468
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||||| || |||| |||||| |||||| | ||||||||||||||||||||    
T  10223522 tatctgaaactttcgaaaattaaagcatctatctaaaacaaacatgaaacttaaa 10223468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 1069225 - 1069180
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||| |||||||| |||| |||||||||| ||||||||||||||||    
T  1069225 gaaacttaaaggacctatctgaaacaaacttgaaacttaaaggacc 1069180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1069304 - 1069393
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| |||||||||||||||||| ||||||||  |||  ||||||||| | |||||| ||| ||  |||||| ||||| |||||    
T  1069304 cttaaaggacctatctgaaaccttagaaacttaaaggacttataagaaacaaacgtaaaacttgaagaacttggggaggtatttcgcctt 1069393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1737607 - 1737676
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||| ||| |||||||||||||  |||| ||||   |||||||||||||    
T  1737607 cttaaaggacctatctgaaaccttataaacttaaaggatctatacgaaataaactccaaacttaaaggac 1737676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 30004139 - 30004075
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    ||||| ||| |||||||||||||||||| ||||| ||  ||| ||||||||||  ||||||||||    
T  30004139 ttaaaggacctatctgaaaccttagaaacttaaaagacatatctgaaacaaactcgaaacttaaa 30004075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5322583 - 5322499
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  5322583 cttaaaggacctatctgcaaccttagaaatttaaaggatctattttaaacaaacatgaaacttaaaggatccggggaggtatttg 5322499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 14336932 - 14337008
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  14336932 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggacctggggaggtatttggcct 14337008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 21956104 - 21956012
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    ||||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || |||||||||||| | ||||||    
T  21956104 ttaaaggacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccagggagatatttgacattattt 21956012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25154819 - 25154906
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| | |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  25154819 cttaaaggacctgtctgaaaccttagaaacttaaaagatctatctgaaacaaacatgaaacttaaaggacccggggaggtatttggcc 25154906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 29031642 - 29031719
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  29031642 tatctaaaacctcagaaatttaaaggatctatttgaaacaaacatgaaagttaaaggacccgaggaggtatttggcct 29031719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 29043762 - 29043839
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  29043762 tatctaaaacctcagaaatttaaaggatctatttgaaacaaacatgaaagttaaaggacccgaggaggtatttggcct 29043839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32751190 - 32751101
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||| |||||||||||||||||| |||||| |||||| | |||||||||||||| |||||||||| ||| ||||||||||||||    
T  32751190 cttaaatgacctatctgaaaccttagaaacttaaagaatctatcttaaacaaacatgaaatttaaaggacctgggaagatatttggcctt 32751101  T

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Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13846678 - 13846590
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||| ||||||||||    
T  13846678 cttaaaagacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaccttaaaggatccggagaggtatttggcct 13846590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34979562 - 34979474
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| ||||| ||||||||||    
T  34979562 cttaaaggacctatctgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcct 34979474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 53856551 - 53856464
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| |||||||||||||||||||||| ||||| ||| |||  |||||||||||||||||||||||||| |||||| |||||||||    
T  53856551 cttaaaagacatatctgaaaccttagaaacttaaaagatttatccgaaacaaacatgaaacttaaaggacctggggaggtatttggcc 53856464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 55358557 - 55358644
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| || || ||||| |||||||||    
T  55358557 cttaaaggacatatctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaaagatccagggaggtatttggcc 55358644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 15631666 - 15631755
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||    
T  15631666 cttaaaggacctatctgaaaccttaaaaacttaaaggatctatgtgaaacaaacatgaaacttaaagga-ccgggaaggtatttggcctta 15631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18598557 - 18598646
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| |||||||||||||||||| ||| |||| |||| | |||||||| ||||||||||||||||||||||| |||||||||||    
T  18598557 cttaaaggacctatctgaaaccttagaaacttagaggacctatctaaaacaaacttgaaacttaaaggacccggggaggtatttggcctt 18598646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40289718 - 40289806
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||| |||| |||||||| ||||||||||||| ||||||||||||||||||||||| ||| | |||||||||||||||    
T  40289718 cttaaaggacctatccgaaatcttagaaacttaaaggatctatctgaaacaaacatgaaacttaaagaacctgaggagatatttggcct 40289806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41898353 - 41898423
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||    
T  41898353 cttaaaggacatatctgaaaccttagaaacttaaatgatctatctgaaacaaacttgaaacttaaaggacc 41898423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35779005 - 35779090
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||||||| |||||||||||||| ||| |||||||||||||   ||||||||||||||||||||||| || | |||||||||||    
T  35779005 cttaaatgacttatctgaaaccttaaaaacttaaaggatctatcgaaaacaaacatgaaacttaaaggatccagagagatatttgg 35779090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21956389 - 21956477
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| |||||||| ||||  ||||||||||||||||||||||||| | ||||| ||||||||||    
T  21956389 cttaaaggacctatctgaaaccttaaaaacttaaaggacctatccgaaacaaacatgaaacttaaaggactcagggaggtatttggcct 21956477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 6112087 - 6112178
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaa-caaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| ||||| ||| |||||||| |||||||||| |||||||| |||||  |||||||||||||||||||||| ||||||||||||    
T  6112087 cttaaaagacctatctaaaagcttagaaacttaaaggatccatttgaaaacaaactcgaaacttaaaggacccggggaggtatttggcctta 6112178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7632904 - 7632833
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||    
T  7632904 cttaaaggacttatctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaagaaccc 7632833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26553974 - 26554044
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| || ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  26553974 cttaaaggacctaactgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaaggacc 26554044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 15631394 - 15631318
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||  || || |||||||||    
T  15631394 tatctgaaaccttagaaatttaaaggacctatctgaaataaacaggaaacttaaaggacctaggaaggtatttggcc 15631318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41898413 - 41898501
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| | |||| |||||| |||||||||||||||| ||||||||  |||| || ||||||||||    
T  41898413 cttaaaggacctatctgaaaccttagaaactgaaagaatctatatgaaacaaacatgaaatttaaaggaatcgggaaggtatttggcct 41898501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 41898190 - 41898115
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||||||||||||||| |||||||| | || |||||||||| |||||||||||||||||  |||| ||||||||    
T  41898190 tatctgaaaccttagaaacttaaaggacccatctgaaacaaacgtgaaacttaaaggacccaaggaggtatttggc 41898115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 46430013 - 46430092
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||||||||||| ||| ||||||||||||| | ||||||| |||||| |||||||| | || ||||||||||||||||    
T  46430013 tatctgaaaccttataaacttaaaggatctatctaaaacaaatatgaaatttaaaggatctggagagatatttggcctta 46430092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 3253491 - 3253545
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  3253491 tatctgaaacattagaaatttaaaggatctaactgaaacaaacatgaaacttaaa 3253545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14336767 - 14336697
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||| |||||||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  14336767 cttaaatgacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 14336697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14966168 - 14966098
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||||||| |||||||||||||||||||| || |||| |||||||||| ||||||||||| ||||    
T  14966168 cttaaaagacatatttgaaaccttagaaatttaaatgacctatctgaaacaaacgtgaaacttaaatgacc 14966098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 18598272 - 18598186
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    ||||||||  |||||||||||||||||| |||||||| |||| |||||||||| ||||||| ||||||| | |||||  ||||||||    
T  18598272 ttaaatgatctatctgaaaccttagaaacttaaaggacctatctgaaacaaacttgaaactcaaaggactcagggaggcatttggcc 18598186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20421203 - 20421133
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| ||||||||||  |||||||||||||||    
T  20421203 cttaaaggacctatctgaaaccttagaaacttaaaggacctatctgaaacaaactcgaaacttaaaggacc 20421133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 25363591 - 25363670
Alignment:
Q  12 tatctgaaaccttagaaatttaaagga--tctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||| || | ||| |||||||||||    
T  25363591 tatctgaaaccttagaaacttaaaggagatctatctgaaacaaacatgaaacttaaaggatcc-gagaggtatttggcctt 25363670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35778945 - 35779010
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||  ||||||||||    
T  35778945 cttaaatgacctatctgaaaccttggaaatttaaaggacctatctgaaacaaactcgaaacttaaa 35779010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 53856764 - 53856829
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| |||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||    
T  53856764 cttaaaggacctatctgaaactttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaa 53856829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14336860 - 14336931
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  ||||||||| | |||||||||||||||    
T  14336860 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaacttcaaacttaaaggaccc 14336931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40998190 - 40998099
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttat 92  Q
    |||||| ||| |||||||||| |||| || ||||| ||||||| | |||||||||||||| |||||||| | | ||||||||||||| ||||    
T  40998190 cttaaaggacctatctgaaactttagtaacttaaaagatctatctaaaacaaacatgaaatttaaaggatctgaggagatatttggcattat 40998099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 41511304 - 41511387
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||| ||| |||||||||| ||||||| ||||| ||||||| ||||| |||||| ||||||||||||| |||| || ||||||    
T  41511304 ttaaaggacctatctgaaactttagaaacttaaatgatctatctgaaataaacataaaacttaaaggactcgggaaggtatttg 41511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 46429856 - 46429793
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||| |||||||||||||||||||||| ||||||||| |||| |||||||||  ||||||||||    
T  46429856 taaaggacatatctgaaaccttagaaacttaaaggatatattcgaaacaaactcgaaacttaaa 46429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29031347 - 29031257
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| ||||||||| |||||||| ||||| ||  ||| | |||||||| |||||||||||||||||  ||||||||||| |||||    
T  29031347 cttaaaggacctatctgaaatcttagaaacttaaaagacttatctaaaacaaacgtgaaacttaaaggacccatggagatatttgacctta 29031257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29043466 - 29043376
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| ||||||||| |||||||| ||||| ||  ||| | |||||||| |||||||||||||||||  ||||||||||| |||||    
T  29043466 cttaaaggacctatctgaaatcttagaaacttaaaagacttatctaaaacaaacgtgaaacttaaaggacccatggagatatttgacctta 29043376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34979622 - 34979552
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||||||  |||| |||||||||  |||||||||||||||    
T  34979622 cttaaaggacctatctgaaaccttagaaacttaaaggacttattcgaaacaaactcgaaacttaaaggacc 34979552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53856704 - 53856774
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||  |||||||||  || ||||||||||||    
T  53856704 cttaaaggacctatctgaaaccttagaaatttaaaggacctatccgaaacaaactcgacacttaaaggacc 53856774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14336707 - 14336618
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| |||||||||| ||| ||| |||||||| |||| |||||||||| | ||||||||||||||  ||||| |||||| ||||    
T  14336707 cttaaaggacctatctgaaactttaaaaacttaaaggacctatctgaaacaaacgtaaaacttaaaggacctagggaggtatttgacctt 14336618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27389869 - 27389780
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| ||||||||| |||| ||| |||||||| |||| |||||||||| | |||||||| ||||||  |||| |||||||||||    
T  27389869 cttaaaggacttatctgaaatcttaaaaacttaaaggacctatctgaaacaaacgttaaacttaatggacccatggaggtatttggcctt 27389780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 32751322 - 32751379
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||||||||||||||| |||||||| |||| |||||||||| | ||||||||||||    
T  32751322 tatctgaaaccttagaaacttaaaggacctatctgaaacaaactttaaacttaaagga 32751379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 50523201 - 50523136
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    ||||| ||| |||||||||||||||||| |||||||||||||  |||||||||  |||||||||||    
T  50523201 ttaaaggacttatctgaaaccttagaaacttaaaggatctatccgaaacaaactcgaaacttaaag 50523136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13870449 - 13870362
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||| |||||||| |||||||||||| |||| | |||||||||| ||| ||||| ||| | ||||||||||||||||    
T  13870449 cttaaaggacctatcttaaaccttaaaaatttaaaggaactatctaaaacaaacat-aaaattaaaagactcagggagatatttggcct 13870362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25363520 - 25363588
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||||||| ||||||||  |||| |||||||||  |||||||||||||    
T  25363520 cttaaaggacctatctgaaaccttagaaacttaaaggacatattcgaaacaaactcgaaacttaaagga 25363588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32557350 - 32557435
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| ||||| |||||||| ||| ||||| |  |||| |||||||||||||||||||||||||||||  ||| |||||||||    
T  32557350 cttaaaggacctatctaaaaccttataaacttaaatg--ctatctgaaacaaacatgaaacttaaaggacccgaagaggtatttggcc 32557435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 40289408 - 40289348
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||| |||||| | |||| |||||||||||||||||||||||||||| ||||| |||||||    
T  40289408 gaaacttaaagtacctatctgaaacaaacatgaaacttaaaggacccagggaggtatttgg 40289348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52850956 - 52850868
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||||||||||| |||||||||||||  |||   |||||||| |||||||||||||| || | ||| ||||||||||    
T  52850956 cttaaaggacttatctgaaaccttcgaaatttaaaggacatatccaaaacaaacgtgaaacttaaaggatccagtgaggtatttggcct 52850868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 32751382 - 32751441
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||| |||||||||||| ||||| || |||| |||||||||||| ||||||||||||||    
T  32751382 tatctaaaaccttagaaacttaaaagacctatctgaaacaaacataaaacttaaaggacc 32751441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18598497 - 18598567
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||||||||||||| |||| |||||||| ||||  |||||||||  |||||||||||||||    
T  18598497 cttaaaggacttatctgaaacctttgaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 18598567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 26553926 - 26553984
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  26553926 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 26553984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40998249 - 40998180
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| ||||||||||||||||| || |||||| |||| ||||||||||  |||||||||||||||    
T  40998249 cttaaaggacctatctgaaaccttagaactt-aaaggacctatctgaaacaaactcgaaacttaaaggacc 40998180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 41898249 - 41898195
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||||||||||||| |||||||||||||  |||||||||  ||||||||||    
T  41898249 tatctgaaaccttagaaacttaaaggatctatccgaaacaaactcgaaacttaaa 41898195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 9860961 - 9861014
Alignment:
Q  18 aaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||| ||||| ||||||| ||||||||||| |||| ||||||||||    
T  9860961 aaaccttagaaacttaaaagatctatctgaaacaaacaagaaatttaaaggacc 9861014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 50523131 - 50523054
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||| |||||| |||||| ||||| || |||| | |||||||| |||||||||||||||| |||||  ||||||||||    
T  50523131 tatccgaaaccatagaaacttaaatgacctatctaaaacaaacgtgaaacttaaaggacctggggatgtatttggcct 50523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 23159176 - 23159108
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||  |||||||||   |||||||||||||    
T  23159176 ttaaaagacctatctgaaaccttagaaacttaaagggtctatccgaaacaaactcaaaacttaaaggac 23159108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 25154665 - 25154597
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||  ||||| |||||||||||| ||||||||  ||| ||||||||||  |||||||||||||||    
T  25154665 taaatgagctatcttaaaccttagaaacttaaaggacatatctgaaacaaactcgaaacttaaaggacc 25154597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34508881 - 34508949
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||| ||| |||||||| ||||| |||||||||  |||| ||||||||    
T  34508881 cttaaaggacttatctgaaaccttaaaaacttaaaggacctattcgaaacaaactcgaaatttaaagga 34508949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 5322632 - 5322573
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    ||||||||||||||||||||||||||| ||||   ||||||||   ||||||||||||||    
T  5322632 tatctgaaaccttagaaatttaaaggacctatccaaaacaaactcaaaacttaaaggacc 5322573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 15631621 - 15631676
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||| |||||||| ||||  |||||||||  |||||||||||||||    
T  15631621 tgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaaggacc 15631676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 25154611 - 25154552
Alignment:
Q  26 gaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||| |||||||| |||| |||||||||| ||||||||||||||||| || || ||||||    
T  25154611 gaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccaggaaggtatttg 25154552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 32557136 - 32557069
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||| ||| ||| |||||| |||||||||||||||| |||| | |||||||| ||||| ||||||||    
T  32557136 ttaaaagacttatttgaaactttagaaatttaaaggacctatctaaaacaaacgtgaaatttaaagga 32557069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 39078418 - 39078371
Alignment:
Q  168 aattcatcaatttagtctctaatatttcaaaatgagagattaaattga 215  Q
    |||||||||||||||||||||| || |||| || ||||||||||||||    
T  39078418 aattcatcaatttagtctctaacatctcaatatcagagattaaattga 39078371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 13870500 - 13870439
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| |||||||||||||| |||||||| ||||| ||||||||  | ||||||||||||||    
T  13870500 acatatttgaaaccttagaaacttaaaggacctattcgaaacaaa-ttcaaacttaaaggacc 13870439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 52851188 - 52851265
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    |||||||||| ||||||| |||||| ||||||     ||||||||||||||||||||||| || || ||||||| ||| ||||    
T  52851188 tatctgaaactttagaaacttaaagaatctat-----acaaacatgaaacttaaaggacctggagaaatatttgacctaattt 52851265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 20421143 - 20421054
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| ||| ||| |||||  ||||||| |||||||| |||| |||||||||| | |||||||||||| ||  | || |||||||||||    
T  20421143 cttaaaggacctatatgaaattttagaaacttaaaggacctatctgaaacaaacgttaaacttaaaggatccatgaaggtatttggcctt 20421054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46429798 - 46429733
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||| ||||||| |||||||||||| ||||| || |||| |||||||||  ||||| |||||    
T  46429798 cttaaatgccatatctaaaaccttagaaacttaaatgacctatctgaaacaaaagtgaaatttaaa 46429733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53856611 - 53856546
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| |||||||||||||||||| |||||||| | |||  |||||||| | |||||||||    
T  53856611 cttaaaggacctatctgaaaccttagaaacttaaaggaccaattcaaaacaaacttcaaacttaaa 53856546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 32557196 - 32557144
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaac 54  Q
    ||||| ||| ||| |||||||||||||| |||||||||||||  |||||||||    
T  32557196 ttaaaggacctatatgaaaccttagaaacttaaaggatctatccgaaacaaac 32557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 1695778 - 1695702
Alignment:
Q  13 atctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||    
T  1695778 atctgaaaccttagaaacttaaaggatctatctgaaacaaacataaaacttaaaggacccggggaggtatttggcct 1695702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 45721212 - 45721123
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctt 90  Q
    |||||| |||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||| || |||||| ||||    
T  45721212 cttaaaggacatatctgaaaccttagaaacttaaaagatctacctgaaacaaacatgaaacttaaaggacccgggaaggtatttgacctt 45721123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20492034 - 20492102
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  20492034 cttaaatgacctatctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaagga 20492102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29987499 - 29987587
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||| |||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||| ||||||    
T  29987499 cttaaaggacctatttgaaaccttagaaacttaaaggatttatctgaaacaaacataaaacttaaaggacccggggaggtatatggcct 29987587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38823758 - 38823842
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| |||||||||| || |||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  38823758 cttaaaggacctatctgaaactttggaaacttaaaggatctatctgaaacaaacataaaacttaaaggacccggggaggtatttg 38823842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42371741 - 42371809
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  42371741 cttaaaggacatatctgaaaccttggaaatttaaaggatctatctgaaacaaacatgaaatttaaagga 42371809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 5739523 - 5739598
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||| || |||||||||||||||||    
T  5739523 tatctgaaaccttagaaacttaaaagatctatctgaaacaaacgtgaaacttaaaagatccggggagatatttggc 5739598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5739457 - 5739367
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||| ||| |||||||||||||||||| ||||||||  ||| |||||||||| |||||||||||||| || |||||||||||| |||||    
T  5739457 cttaaaggacctatctgaaaccttagaaacttaaaggacatatctgaaacaaacgtgaaacttaaaggatccagggagatatttgacctta 5739367  T

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Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 5277364 - 5277287
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||||||||||| || |||||||||||    
T  5277364 tatctgaaacctcagaaacttaaaagatctatctgaaacaaacaggaaacttaaaggacccggagatatatttggcct 5277287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32712247 - 32712170
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggag 78  Q
    |||||| ||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  32712247 cttaaaggacttatctgaaatcttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaagacccgaggag 32712170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49113196 - 49113265
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  49113196 cttaaaggacatgtctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaaggac 49113265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 29987275 - 29987196
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    |||||||||||||| ||| |||||||| |||| |||||||||| |||||||||||||| ||  |||||||||||||||||    
T  29987275 tatctgaaaccttaaaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggatccatggagatatttggcctta 29987196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 41810963 - 41811049
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    ||||| ||| |||||||||||||||||| |||||| |||||| |||||||||||||||||||||| || ||| |||||| ||||||||    
T  41810963 ttaaaggacctatctgaaaccttagaaacttaaag-atctatctgaaacaaacatgaaacttaaatgatccgaggagatgtttggcct 41811049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1695850 - 1695780
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||    
T  1695850 cttaaaggacctatctgaaaccttagaaacttaaaggacctatttgaaacaaacttcaaacttaaaggacc 1695780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39834073 - 39833987
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| |||||||||| |||||||||||| |||  ||||| ||||||||    
T  39834073 cttaaaggacttatctgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaagaacctagggaggtatttggc 39833987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4764908 - 4764823
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaa-catgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| ||| ||||| |||||||| ||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||    
T  4764908 cttaaaggacctatttgaaatcttagaaacttaaaggatctatctgaaaaaaaacatgaaacttaaaggactcggggagatatttg 4764823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4974907 - 4974830
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggag 78  Q
    |||||| ||| ||||| |||||||||||| ||||||||||||| |||||||||||| ||| ||||||||| |||||||    
T  4974907 cttaaaggacctatctaaaaccttagaaacttaaaggatctatctgaaacaaacataaaatttaaaggactcggggag 4974830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 4965082 - 4965150
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    ||||| ||| |||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||||    
T  4965082 ttaaaagacctatctgaaaccttagaaacttaaatgatctatctaaaacaaacatgaaacttaaaggac 4965150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18030276 - 18030188
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||| ||| ||||| ||||||||||||| | ||||||||||||||||| ||||| |  ||||||||||    
T  18030276 cttaaaggacctatctgaaaccttaaaaacttaaaagatctatttgaaatagacatgaaacttaaaggatccgggaatgtatttggcct 18030188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1102897 - 1102980
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatattt 84  Q
    |||||| ||| |||||||||||||||||| ||||||| ||||| | ||||||| ||||||||||||||| |||| ||| |||||    
T  1102897 cttaaaagacctatctgaaaccttagaaacttaaagggtctatctaaaacaaatatgaaacttaaaggatccggagaggtattt 1102980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15615427 - 15615497
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||  |||||||||| ||||    
T  15615427 cttaaaggacatatctgaaaccttagaaacttaaaggacctatctgaaacaaactcgaaacttaaaagacc 15615497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 24025930 - 24025992
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaa 65  Q
    |||||||  ||| |||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  24025930 taaatgatctatatgaaaccttataaatttaaatgatctatttgaaacaaacatgaaacttaa 24025992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 4765138 - 4765207
Alignment:
Q  18 aaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggc 87  Q
    |||||||||||| |||||| | |||| |||||||||| ||||||||||||||||| ||||| ||||||||    
T  4765138 aaaccttagaaacttaaagaacctatctgaaacaaacgtgaaacttaaaggaccctgggaggtatttggc 4765207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48074372 - 48074441
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||| |||||||||||||||||| ||||||||  ||| ||||||||||  ||||||||||||||    
T  48074372 cttaaatgacctatctgaaaccttagaaacttaaaggacatatctgaaacaaactcgaaacttaaaggac 48074441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 48074432 - 48074516
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttgg 86  Q
    |||||| ||| ||||| |||| ||||||| |||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||    
T  48074432 cttaaaggacttatcttaaac-ttagaaacttaaaggacctatctgaaacaaacataaaacttaaaggatccggggaggtatttgg 48074516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29386381 - 29386445
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaa 65  Q
    |||||| ||| |||||||||| ||||||| ||||| ||||||| |||||||||||||||||||||    
T  29386381 cttaaaagacctatctgaaactttagaaacttaaatgatctatctgaaacaaacatgaaacttaa 29386445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 49588084 - 49588013
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccg 73  Q
    |||||| ||||||||| |||||||| ||| ||||||||| ||| ||||||||||||| |||||||||||||||    
T  49588084 cttaaaagacatatctaaaaccttaaaaaattaaaggatttatctgaaacaaacatg-aacttaaaggacccg 49588013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 1102675 - 1102612
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||| ||||||||||||||||||||||||| |||| | |||||||||||||| |||||| ||||    
T  1102675 acatgtctgaaaccttagaaatttaaaggacctatctaaaacaaacatgaaatttaaagaaccc 1102612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4974967 - 4974897
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  ||||||||| | ||||||||||||||    
T  4974967 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaacttcaaacttaaaggacc 4974897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20491785 - 20491715
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||| ||| ||||| |||||||   |||||||||||||||||||||||||    
T  20491785 cttaaaggacctatctgaaaccttaaaaacttaaaagatctatccaaaacaaacatgaaacttaaaggacc 20491715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20491974 - 20492044
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| ||||||||||  |||||||||| ||||    
T  20491974 cttaaaggacctatctgaaaccttagaaacttaaaggacctatctgaaacaaactcgaaacttaaatgacc 20492044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 39834289 - 39834371
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||| ||| |||||||||||||| ||| ||||| ||||||| | |||||||| |||||||||||| |||| |||| |||||||    
T  39834289 taaaggacctatctgaaaccttataaacttaaaagatctatctaaaacaaacgtgaaacttaaagaacccagggaaatatttg 39834371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 18088141 - 18088084
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||||||||||||||| ||||||||||||| ||||||||||   ||||||||||||    
T  18088141 tatctgaaaccttagaaacttaaaggatctatctgaaacaaactcaaaacttaaagga 18088084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18030564 - 18030628
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaa 65  Q
    ||||||| | ||||||||||||||||||||||||||||  ||| ||||||||| |||||| ||||    
T  18030564 cttaaataatatatctgaaaccttagaaatttaaaggacttatctgaaacaaatatgaaatttaa 18030628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 29987450 - 29987509
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| |||||||| ||||| ||||||||| |  |||||||||||||    
T  29987450 tatctgaaaccttagaaacttaaaggacctattcgaaacaaacttccaacttaaaggacc 29987509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 43142910 - 43142977
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||||||  |||||||||||||||||||||||| || |||||| |||||||| | ||| ||||||||    
T  43142910 ttaaatgatgtatctgaaaccttagaaatttaaatgacctatttaaaacaaacgttaaatttaaagga 43142977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4764968 - 4764898
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||   ||||||||||||||    
T  4764968 cttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactacaaacttaaaggacc 4764898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 18088319 - 18088388
Alignment:
Q  16 tgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    ||||| |||||||| ||||| ||| ||| | ||||||||||||||||||||||||| | |||| ||||||    
T  18088319 tgaaatcttagaaacttaaatgatttatctaaaacaaacatgaaacttaaaggaccagtggaggtatttg 18088388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41810810 - 41810745
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| |||||||||||||||||| |||||  | |||| |||||||||| |||||||||||    
T  41810810 cttaaaggacctatctgaaaccttagaaacttaaataacctatctgaaacaaacgtgaaacttaaa 41810745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43142756 - 43142691
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||||||||||| |||||||||| ||||| |||||||  |||||||||  ||||||||||    
T  43142756 cttaaaggacatatctgacaccttagaaacttaaaagatctatccgaaacaaactcgaaacttaaa 43142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45721272 - 45721203
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| ||||| |||||||  ||||||| |  ||||||||||||||    
T  45721272 cttaaaggacctatctgaaaccttagaaacttaaatgatctatccgaaacaagctcgaaacttaaaggac 45721203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45721494 - 45721587
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    |||||| ||| ||| |||||||||||||| ||||| ||  ||| |||||||||| |||||||||||||| || || || ||||| |||| ||||    
T  45721494 cttaaaggacctatatgaaaccttagaaacttaaaagacatatctgaaacaaacgtgaaacttaaaggatccaggaaggtatttagcctaattt 45721587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3339173 - 3339259
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcc 88  Q
    |||||| ||| ||| |||||| ||||||| |||||| |||||| |||||||||  |||||||||||||||   ||||| |||||||||    
T  3339173 cttaaaggacctatttgaaacattagaaacttaaag-atctatctgaaacaaaagtgaaacttaaaggacttagggaggtatttggcc 3339259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 4964987 - 4964920
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||| ||| |||||||||||||||||| |||||||| ||||  |||||||||   ||||||||||||    
T  4964987 ttaaaggacctatctgaaaccttagaaacttaaaggacctatccgaaacaaactcaaaacttaaagga 4964920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 15615255 - 15615200
Alignment:
Q  18 aaaccttagaaatttaaa-ggatctatttgaaacaaacatgaaacttaaaggaccc 72  Q
    |||||||||||| ||||| |||||||| ||||||||| | ||||||||||||||||    
T  15615255 aaaccttagaaacttaaaaggatctatctgaaacaaatacgaaacttaaaggaccc 15615200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 38823709 - 38823768
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| |||||||| ||||  |||||||||   ||||||||||||||    
T  38823709 tatctgaaaccttagaaacttaaaggacctatccgaaacaaactctaaacttaaaggacc 38823768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1102743 - 1102677
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    |||||| ||| ||||||||| |||||||| |||||||  |||| ||||||||||  |||||||||||    
T  1102743 cttaaaggacctatctgaaatcttagaaacttaaagggcctatctgaaacaaactcgaaacttaaag 1102677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 29386156 - 29386098
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||||||| ||| ||| |||||||| | ||||||||||||| ||||| |||||||||    
T  29386156 tatctgaaactttataaacttaaaggaccaatttgaaacaaacgtgaaatttaaaggac 29386098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29386321 - 29386391
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||| |||||||||   ||||||||| ||||    
T  29386321 cttaaaggacctatctgaaaccttagaaacttaaaagacctattcgaaacaaactccaaacttaaaagacc 29386391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41810870 - 41810800
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| ||| |||||||||||||||||| ||||| ||  |||  ||||||||| | ||||||||||||||    
T  41810870 cttaaaggacctatctgaaaccttagaaacttaaatgacatatccgaaacaaacttaaaacttaaaggacc 41810800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 49588133 - 49588079
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||||||||||||||| |||||||| ||||  |||||||||  ||||||||||    
T  49588133 tatctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaa 49588079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29386228 - 29386163
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaa 66  Q
    |||||| ||| |||||||||||||||||| ||||| || ||||  |||||||||  ||||||||||    
T  29386228 cttaaaggacctatctgaaaccttagaaacttaaatgacctatccgaaacaaactcgaaacttaaa 29386163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39834133 - 39834064
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| |||||||||||||| ||| ||| |||||||| ||||   ||||||||  ||||||||||||||    
T  39834133 cttaaaggacatatctgaaactttaaaaacttaaaggacctatccaaaacaaactcgaaacttaaaggac 39834064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 49588344 - 49588401
Alignment:
Q  12 tatctgaaaccttagaaa-tttaaaggatctatttgaaacaaacatgaaacttaaagg 68  Q
    |||||||||||||||||| || ||||||  ||| |||||||||| |||||||||||||    
T  49588344 tatctgaaaccttagaaacttaaaaggacatatctgaaacaaacttgaaacttaaagg 49588401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 24025803 - 24025843
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctat 43  Q
    |||| ||||||||||||||| || |||||||||||||||||    
T  24025803 taaaggacatatctgaaaccctataaatttaaaggatctat 24025843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42371472 - 42371384
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||| |||| ||||||| |||||||  |||| |||||||||  ||||||||||| ||||  || | |||||||||||    
T  42371472 cttaaaggacttatctaaaacattagaaaattaaaggtcctatctgaaacaaatgtgaaacttaaatgacctaggaatatatttggcct 42371384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47824545 - 47824478
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||| ||| |||||| | || | |||||||||| ||||||||||||||    
T  47824545 cttaaaggacctatctgaaaccttaaaaacttaaag-acctttctgaaacaaacgtgaaacttaaagga 47824478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 57; Significance: 6e-24; HSPs: 4)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23423 - 23507
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttg 85  Q
    |||||| ||| ||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  23423 cttaaaggacctatctgaaatcttagaaacttaaaggatctatttgaaacaaactcgaaacttaaaggacccggggaggtatttg 23507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 22268 - 22189
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcctta 91  Q
    ||||||||  |||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||| |||||||||    
T  22268 tatctgaagacttagaaacttaaaggatctatctgaaacaaatatgaaacttaaaggacccagggagatacttggcctta 22189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 22474 - 22551
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||| |||||||||||||||| |||| |||||||||| | ||||||||| ||||| | ||| ||||||||||    
T  22474 tatctgaaactttagaaatttaaaggacctatctgaaacaaacgttaaacttaaaagacccagagaggtatttggcct 22551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 22411 - 22469
Alignment:
Q  9 acatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaag 67  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||  |||||||||||    
T  22411 acatatctgaaaccttagaaatttaaaggacatattcgaaacaaactcgaaacttaaag 22469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22070 - 22162
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatt 93  Q
    |||||||||| |||||||||| ||||||| ||||||| || || | | | |||||||||||||||||||||||||||| ||||||||||||||    
T  22070 cttaaatgacctatctgaaactttagaaacttaaagggtcaatctaagataaacatgaaacttaaaggacccggggaggtatttggccttatt 22162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21897 - 21809
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||||||| ||||||||||| |||||| |||||||| ||||  ||||||||| ||||||||||||||||  | ||| ||||||||||    
T  21897 cttaaatgacctatctgaaaccgtagaaacttaaaggacctatccgaaacaaacgtgaaacttaaaggacctagagaggtatttggcct 21809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 22021 - 22080
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||||||||||||||| |||||||| ||||  |||||||||  |||||||||| ||||    
T  22021 tatctgaaaccttagaaacttaaaggacctatacgaaacaaactcgaaacttaaatgacc 22080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11798 - 11710
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| || | ||| ||||||||||    
T  11798 cttaaaggacctatctgaaaccttcgaaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccagtgaggtatttggcct 11710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 60556 - 60468
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggcct 89  Q
    |||||| ||| |||||||||||||||||| |||||| | |||| |||||||||| ||||||||||||||||| ||||| ||||||||||    
T  60556 cttaaaggacctatctgaaaccttagaaacttaaagtacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcct 60468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 60746 - 60837
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttattt 94  Q
    |||| ||| |||| ||||||||||||| ||||| ||||||| ||||||||| || ||||||||||||| |  |||| |||||||||| ||||    
T  60746 taaaggacctatccgaaaccttagaaacttaaatgatctatctgaaacaaatataaaacttaaaggactcaaggaggtatttggcctaattt 60837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 60614 - 60546
Alignment:
Q  3 taaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||| ||| |||||||||||||||||  ||||||||  |||| |||||||||  |||||||||||||||    
T  60614 taaaggacctatctgaaaccttagaatcttaaaggacatattcgaaacaaactcgaaacttaaaggacc 60546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 60684 - 60754
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacc 71  Q
    |||||| |||||||| || |||||||||| ||||||||  ||||||||||||||   |||| |||||||||    
T  60684 cttaaaggacatatccgagaccttagaaacttaaaggacttatttgaaacaaactccaaacataaaggacc 60754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 50; Significance: 9e-20; HSPs: 4)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 23960 - 24041
Alignment:
Q  12 tatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatttggccttatt 93  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||  | || |||||| |||||||    
T  23960 tatctgaaaccttagaaatttaaaggatctatctgaaacaaacgtgaaacttaaatgacccatgaaggtatttgaccttatt 24041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 23735 - 23668
Alignment:
Q  2 ttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||||||    
T  23735 ttaaatgacttatctgaaaccttaaaaacttaaatgatctatctaaaacaaacatgaaacttaaagga 23668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23796 - 23743
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaac 54  Q
    ||||||||||||||||||||||| |||||||||||||| ||||  |||||||||    
T  23796 cttaaatgacatatctgaaacctgagaaatttaaaggacctatccgaaacaaac 23743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23889 - 23957
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaagga 69  Q
    |||||| ||| |||||||||||||| ||| |||||| | ||||  ||||||||| ||||||| ||||||    
T  23889 cttaaaggacctatctgaaaccttaaaaacttaaagaacctatccgaaacaaacttgaaactgaaagga 23957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32443 - 32502
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaac 61  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  32443 cttaaatgacatatctgaaaccttagaaacttaaa-gatctatctgaaacaaacatgaaac 32502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32320 - 32251
Alignment:
Q  1 cttaaatgacatatctgaaaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggac 70  Q
    |||||| ||| |||||||||||||||||| |||||||| |||| ||||| ||||  ||||||||||||||    
T  32320 cttaaaggacttatctgaaaccttagaaacttaaaggacctatctgaaagaaactcgaaacttaaaggac 32251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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