View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14480_high_16 (Length: 381)

Name: NF14480_high_16
Description: NF14480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14480_high_16
NF14480_high_16
[»] chr5 (5 HSPs)
chr5 (11-119)||(36574607-36574715)
chr5 (277-366)||(1817874-1817962)
chr5 (277-366)||(11478931-11479020)
chr5 (279-351)||(1817720-1817792)
chr5 (277-327)||(36574331-36574381)
[»] chr3 (11 HSPs)
chr3 (20-119)||(30229335-30229434)
chr3 (278-326)||(27663384-27663432)
chr3 (289-366)||(16292793-16292870)
chr3 (279-327)||(48085939-48085987)
chr3 (277-366)||(30229038-30229124)
chr3 (293-327)||(13330377-13330411)
chr3 (289-323)||(25157756-25157790)
chr3 (278-323)||(48086108-48086153)
chr3 (277-327)||(25239853-25239903)
chr3 (19-101)||(48086401-48086483)
chr3 (67-119)||(25158003-25158055)
[»] chr2 (2 HSPs)
chr2 (278-327)||(31627258-31627307)
chr2 (293-327)||(37939737-37939771)
[»] chr4 (8 HSPs)
chr4 (278-365)||(41969388-41969475)
chr4 (290-327)||(35425633-35425670)
chr4 (281-366)||(29905813-29905898)
chr4 (289-326)||(13525039-13525076)
chr4 (283-360)||(41969224-41969302)
chr4 (289-323)||(16469612-16469646)
chr4 (289-322)||(34980922-34980955)
chr4 (299-327)||(13505366-13505394)
[»] chr8 (8 HSPs)
chr8 (290-327)||(6298134-6298171)
chr8 (286-327)||(6798592-6798633)
chr8 (290-327)||(28838373-28838410)
chr8 (294-326)||(26489164-26489196)
chr8 (68-119)||(16003115-16003166)
chr8 (293-327)||(9238703-9238737)
chr8 (289-327)||(29371501-29371539)
chr8 (280-324)||(16003379-16003423)
[»] chr7 (5 HSPs)
chr7 (289-326)||(9654014-9654051)
chr7 (277-308)||(31011102-31011133)
chr7 (289-327)||(2413245-2413283)
chr7 (293-327)||(22518120-22518154)
chr7 (299-327)||(15826215-15826243)
[»] chr1 (3 HSPs)
chr1 (291-323)||(12024370-12024402)
chr1 (296-327)||(20007370-20007401)
chr1 (296-327)||(24965561-24965592)
[»] scaffold0046 (1 HSPs)
scaffold0046 (296-327)||(74882-74913)
[»] chr6 (3 HSPs)
chr6 (293-327)||(17754922-17754956)
chr6 (299-327)||(19244292-19244320)
chr6 (299-327)||(31020923-31020951)


Alignment Details
Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 36574715 - 36574607
Alignment:
Q  11 cacagaagtcattgtgtttcaaactcaaccaaatcgaattttctcccaaattatgtgaatttcatcaaactcaaccaaaacaacttcaacttctaattca 110  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||||||| ||  ||||| |||||||||||||||| ||| ||||||||||| ||||    
T  36574715 cacagaagccattgtgtttcaaactcagctaaatcgaattttctcccaaattgtgcaaattttatcaaactcaaccaaatcaatttcaacttctatttca 36574616  T
Q  111 attacaagt 119  Q
    |||| ||||    
T  36574615 attaaaagt 36574607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 366
Target Start/End: Complemental strand, 1817962 - 1817874
Alignment:
Q  277 gaactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaatnnnnnnntgtttgattttttgcatgttaatgataaaatt 366  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||       ||||||| |||||||||||||||||| |||||    
T  1817962 gaactcataatgtttatgttgaactctaggtgtatgataaaatatctcaatgaaaaattgtttga-tttttgcatgttaatgatgaaatt 1817874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 366
Target Start/End: Complemental strand, 11479020 - 11478931
Alignment:
Q  277 gaactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaatnnnnnnntgtttgattttttgcatgttaatgataaaatt 366  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||||||       |||||||| ||||||||||||||||| |||||    
T  11479020 gaactcataatgttaatgttgaactctaggtgtttagtaaaatgtctcaatgaaaaattgtttgatattttgcatgttaatgatgaaatt 11478931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 1817792 - 1817720
Alignment:
Q  279 actcataatgtttatgttgaactctaggtgtttgataaaatgtctcaatnnnnnnntgtttgattttttgcat 351  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||       |||||||||||||||||    
T  1817792 actcataatgtttatgttgaactctagatgtttgataaaatgtcttaatgaaaaattgtttgattttttgcat 1817720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 36574381 - 36574331
Alignment:
Q  277 gaactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||| |||||||||||||||||| ||| |||||||||| ||||||||||    
T  36574381 gaactcgtaatgtttatgttgaactatagatgtttgataagatgtctcaat 36574331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 30229434 - 30229335
Alignment:
Q  20 cattgtgtttcaaactcaaccaaatcgaattttctcccaaattatgtgaatttcatcaaactcaaccaaaacaacttcaacttctaattcaattacaagt 119  Q
    ||||||||||||||||| || | |  |||||||||| |||||| || ||||||||||||||||||| ||| ||||||||| |||||| ||||||||||||    
T  30229434 cattgtgtttcaaactctacaataatgaattttctcgcaaattgtgcgaatttcatcaaactcaacaaaatcaacttcaatttctaactcaattacaagt 30229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 27663432 - 27663384
Alignment:
Q  278 aactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27663432 aactcataatgtttatgttgaactttaggtgtttgataaaatgtctcaa 27663384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 16292870 - 16292793
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtctcaatnnnnnnntgtttgattttttgcatgttaatgataaaatt 366  Q
    |||||||||| ||||||||||||||||||||||||||||       ||||| || | |||||||||||||||||||||    
T  16292870 tttatgttgacctctaggtgtttgataaaatgtctcaatcaaaaattgttttatatcttgcatgttaatgataaaatt 16292793  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 48085987 - 48085939
Alignment:
Q  279 actcataatgtttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  48085987 actcgtaatttttatgttgaactctaggtgtttgataaaatgtctcaat 48085939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 366
Target Start/End: Complemental strand, 30229124 - 30229038
Alignment:
Q  277 gaactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaatnnnnnnntgtttgattttttgcatgttaatgataaaatt 366  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||||||||       ||||||||||||||||| |||||||| |||||    
T  30229124 gaactcatattgtttaggttgaactct--gtgtttgataaaatgtctcaat-gaaaattgtttgattttttgcattttaatgatgaaatt 30229038  T

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Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 327
Target Start/End: Original strand, 13330377 - 13330411
Alignment:
Q  293 tgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||||||||||||    
T  13330377 tgttgaactctaggtgtttgataaaatgtctcaat 13330411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 25157790 - 25157756
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtct 323  Q
    |||||||||||||||||||||||||||||||||||    
T  25157790 tttatgttgaactctaggtgtttgataaaatgtct 25157756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 48086153 - 48086108
Alignment:
Q  278 aactcataatgtttatgttgaactctaggtgtttgataaaatgtct 323  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||    
T  48086153 aactcataatatttatgttgaactctaggtgtttggttaaatgtct 48086108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 25239853 - 25239903
Alignment:
Q  277 gaactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||| | | |||||||||| | ||||||||||||||||||||||    
T  25239853 gaactcataatatatttgttgaactccaagtgtttgataaaatgtctcaat 25239903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 48086483 - 48086401
Alignment:
Q  19 tcattgtgtttcaaactcaaccaaatcgaattttctcccaaattatgtgaatttcatcaaactcaaccaaaacaacttcaact 101  Q
    |||||||||||||||  | |  |||||||||||  || |||||| |  ||||||||||||||||||||| | |||||||||||    
T  48086483 tcattgtgtttcaaaacctaagaaatcgaatttattctcaaattgtacgaatttcatcaaactcaaccagatcaacttcaact 48086401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 25158055 - 25158003
Alignment:
Q  67 gaatttcatcaaactcaaccaaaacaacttcaacttctaattcaattacaagt 119  Q
    |||||| |||||||||||||||| |||| |||||||||| | |||| ||||||    
T  25158055 gaatttgatcaaactcaaccaaatcaacatcaacttctactgcaatcacaagt 25158003  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 31627258 - 31627307
Alignment:
Q  278 aactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  31627258 aactcataatgcttatgttgaactctaggtgtttgataaaacgtctcaat 31627307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 327
Target Start/End: Complemental strand, 37939771 - 37939737
Alignment:
Q  293 tgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||||||||||||    
T  37939771 tgttgaactctaggtgtttgataaaatgtctcaat 37939737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 41969475 - 41969388
Alignment:
Q  278 aactcataatgtttatgttgaactctaggtgtttgataaaatgtctcaatnnnnnnntgtttgattttttgcatgttaatgataaaat 365  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||       |  |||||||||||||| |||||||| ||||    
T  41969475 aactcataatatttatgttgaactctagctgtttcataaaatgtctcaatgaaaaattaattgattttttgcatattaatgatgaaat 41969388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 35425670 - 35425633
Alignment:
Q  290 ttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35425670 ttatgttgaactctaggtgtttgataaaatgtctcaat 35425633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 366
Target Start/End: Original strand, 29905813 - 29905898
Alignment:
Q  281 tcataatgtttatgttgaactctaggtgtttgataaaatgtctcaatnnnnnnntgtttgattttttgcatgttaatgataaaatt 366  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||       |  |||||||||||||||||||| || |||||    
T  29905813 tcatgatgtttatgttgaactctatatgtttgataaaatgtctcaatgaaaaattaattgattttttgcatgttaataatgaaatt 29905898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 13525076 - 13525039
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtctcaa 326  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  13525076 tttatgttgaactctaggtgtttgataaaatatctcaa 13525039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 41969302 - 41969224
Alignment:
Q  283 ataatgtttatgttgaactctaggtgtttgat-aaaatgtctcaatnnnnnnntgtttgattttttgcatgttaatgat 360  Q
    |||||||||||||| || |||||||||||||| |||||||||||||       |  |||||||||||||||||||||||    
T  41969302 ataatgtttatgtttaattctaggtgtttgataaaaatgtctcaatgaaatattaattgattttttgcatgttaatgat 41969224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Original strand, 16469612 - 16469646
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtct 323  Q
    ||||||||||||||||||||||||| |||||||||    
T  16469612 tttatgttgaactctaggtgtttgacaaaatgtct 16469646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 322
Target Start/End: Complemental strand, 34980955 - 34980922
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtc 322  Q
    |||||||||||||| |||||||||||||||||||    
T  34980955 tttatgttgaactccaggtgtttgataaaatgtc 34980922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 327
Target Start/End: Complemental strand, 13505394 - 13505366
Alignment:
Q  299 actctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||||||    
T  13505394 actctaggtgtttgataaaatgtctcaat 13505366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 6298171 - 6298134
Alignment:
Q  290 ttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6298171 ttatgttgaactctaggtgtttgataaaatgtctcaat 6298134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 6798633 - 6798592
Alignment:
Q  286 atgtttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  6798633 atgtttatgttgaactctaggtgtttaataaaatgtctcaat 6798592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 28838410 - 28838373
Alignment:
Q  290 ttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||||||| |||||||    
T  28838410 ttatgttgaactctaggtgtttgataaaatatctcaat 28838373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 326
Target Start/End: Original strand, 26489164 - 26489196
Alignment:
Q  294 gttgaactctaggtgtttgataaaatgtctcaa 326  Q
    |||||||||||||||||||||||||||||||||    
T  26489164 gttgaactctaggtgtttgataaaatgtctcaa 26489196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 16003115 - 16003166
Alignment:
Q  68 aatttcatcaaactcaaccaaaacaacttcaacttctaattcaattacaagt 119  Q
    ||||| |||||||| ||||||| ||||||||||||| | |||||||||||||    
T  16003115 aattttatcaaacttaaccaaatcaacttcaacttccacttcaattacaagt 16003166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 327
Target Start/End: Complemental strand, 9238737 - 9238703
Alignment:
Q  293 tgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||| ||||||||||||||||||||||    
T  9238737 tgttgaactctacgtgtttgataaaatgtctcaat 9238703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 29371539 - 29371501
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  29371539 tttatgttgaactctaggtgtttgagaaaatgtcacaat 29371501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 16003379 - 16003423
Alignment:
Q  280 ctcataatgtttatgttgaactctaggtgtttgataaaatgtctc 324  Q
    |||||||| |||||||||| || ||| ||||||||||||||||||    
T  16003379 ctcataatttttatgttgagctatagctgtttgataaaatgtctc 16003423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 9654051 - 9654014
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtctcaa 326  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  9654051 tttatgttgaactctaggtgtttgataaaatatctcaa 9654014  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 308
Target Start/End: Complemental strand, 31011133 - 31011102
Alignment:
Q  277 gaactcataatgtttatgttgaactctaggtg 308  Q
    ||||||||||||||||||||||||||||||||    
T  31011133 gaactcataatgtttatgttgaactctaggtg 31011102  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 2413283 - 2413245
Alignment:
Q  289 tttatgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  2413283 tttatgttgaattctaggtgtttgaaaaaatgtctcaat 2413245  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 327
Target Start/End: Complemental strand, 22518154 - 22518120
Alignment:
Q  293 tgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||| ||||||||||||||    
T  22518154 tgttgaactctaggtgtttgttaaaatgtctcaat 22518120  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 327
Target Start/End: Complemental strand, 15826243 - 15826215
Alignment:
Q  299 actctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||||||    
T  15826243 actctaggtgtttgataaaatgtctcaat 15826215  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 323
Target Start/End: Original strand, 12024370 - 12024402
Alignment:
Q  291 tatgttgaactctaggtgtttgataaaatgtct 323  Q
    |||||||||||||||||||||||||||||||||    
T  12024370 tatgttgaactctaggtgtttgataaaatgtct 12024402  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 327
Target Start/End: Complemental strand, 20007401 - 20007370
Alignment:
Q  296 tgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||||||||||||||||||||||||    
T  20007401 tgaactctaggtgtttgataaaatgtctcaat 20007370  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 327
Target Start/End: Complemental strand, 24965592 - 24965561
Alignment:
Q  296 tgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||||||||||||||||||||||||    
T  24965592 tgaactctaggtgtttgataaaatgtctcaat 24965561  T

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Target: scaffold0046 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 327
Target Start/End: Complemental strand, 74913 - 74882
Alignment:
Q  296 tgaactctaggtgtttgataaaatgtctcaat 327  Q
    ||||||||||||||||||||||||||||||||    
T  74913 tgaactctaggtgtttgataaaatgtctcaat 74882  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 327
Target Start/End: Original strand, 17754922 - 17754956
Alignment:
Q  293 tgttgaactctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||| ||||||||||||||||||||||    
T  17754922 tgttgaactctaagtgtttgataaaatgtctcaat 17754956  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 327
Target Start/End: Complemental strand, 19244320 - 19244292
Alignment:
Q  299 actctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||||||    
T  19244320 actctaggtgtttgataaaatgtctcaat 19244292  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 327
Target Start/End: Original strand, 31020923 - 31020951
Alignment:
Q  299 actctaggtgtttgataaaatgtctcaat 327  Q
    |||||||||||||||||||||||||||||    
T  31020923 actctaggtgtttgataaaatgtctcaat 31020951  T

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