View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14480_high_17 (Length: 378)
Name: NF14480_high_17
Description: NF14480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14480_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 358
Target Start/End: Complemental strand, 10425676 - 10425322
Alignment:
| Q |
4 |
taattaatcttctgccctgtttggctgaacacataatcaaaaacagcaggtagatcataggtaacaagttcatcccatgaccaattccaaaaggcctgtc |
103 |
Q |
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| T |
10425676 |
taattaatcttctgccctgtttggctgaacacataatcaaaaacagcaggtagatcatagataacaagttcatcccatgaccaattccaaaaggcctgtc |
10425577 |
T |
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| Q |
104 |
atatttataacacagaaagtgtcaattaataaatggnnnnnnnnnnnnnnnnngacaaagaaaaatttatgtattagagaaggtacactctcatgcaaag |
203 |
Q |
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| T |
10425576 |
atatttataacacagaaagtgtcaattaataaatggttttctttttcttttttgacaaagaaaaatttatgtattagagaaggtacactctcatgcaaag |
10425477 |
T |
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| Q |
204 |
ctagaagatacactaatttcattaaggattattacattaaagggnnnnnnnncaaataaatttagt-acttcnnnnnnncattttccactctactttatt |
302 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | || ||||||||||||||||||||| |
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| T |
10425476 |
ctagaagatacactaatttcattaagggttattacattaaaggg-tttttttcaaataaatttagtaatttgaaaaaaacattttccactctactttatt |
10425378 |
T |
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| Q |
303 |
tctaacagttttaatttgtaacaaccagataataaatggtaacaataaaattggtc |
358 |
Q |
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||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
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| T |
10425377 |
tctaacagttttaatttgtaacaaccacataataaatgctaacaataaaattggtc |
10425322 |
T |
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