View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14480_low_15 (Length: 389)
Name: NF14480_low_15
Description: NF14480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14480_low_15 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 20 - 381
Target Start/End: Complemental strand, 14179057 - 14178693
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
14179057 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcaataaaaaaaatgaac |
14178958 |
T |
|
| Q |
117 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178957 |
accaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
14178858 |
T |
|
| Q |
217 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14178857 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
14178758 |
T |
|
| Q |
317 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14178757 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
14178693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 20 - 381
Target Start/End: Complemental strand, 14174303 - 14173939
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
14174303 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagtgataaaaaaaatgaac |
14174204 |
T |
|
| Q |
117 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174203 |
accaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
14174104 |
T |
|
| Q |
217 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14174103 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
14174004 |
T |
|
| Q |
317 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14174003 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
14173939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 20 - 381
Target Start/End: Original strand, 28611567 - 28611931
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
28611567 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaatgaac |
28611666 |
T |
|
| Q |
117 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
216 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611667 |
accaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
28611766 |
T |
|
| Q |
217 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28611767 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
28611866 |
T |
|
| Q |
317 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28611867 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
28611931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 20 - 381
Target Start/End: Original strand, 28606805 - 28607169
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaac |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||| |
|
|
| T |
28606805 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaattaac |
28606904 |
T |
|
| Q |
117 |
accaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
216 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606905 |
accaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
28607004 |
T |
|
| Q |
217 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28607005 |
tccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagaga |
28607104 |
T |
|
| Q |
317 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28607105 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
28607169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 21 - 381
Target Start/End: Complemental strand, 44161949 - 44161588
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaaca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
44161949 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
44161850 |
T |
|
| Q |
118 |
ccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
44161849 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaat--tctct |
44161752 |
T |
|
| Q |
218 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
317 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
44161751 |
ccactctcttacacacacaagagatacaatatagtgtttcccgtaagacctacttctattctaatgctattattttatagcacctagaagttatagagat |
44161652 |
T |
|
| Q |
318 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
44161651 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctattattcctctc |
44161588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 375
Target Start/End: Complemental strand, 11104829 - 11104477
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
11104829 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagctgtagcgataaaaatgaacacca |
11104730 |
T |
|
| Q |
121 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
220 |
Q |
| |
|
||||||||| | ||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
11104729 |
atatttaacatagaaaatcctctaatatcgagggtaa-accacgggacaaactccgaaaaatattccaccatatctaagaatattacaatattctctcca |
11104631 |
T |
|
| Q |
221 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
320 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
11104630 |
ctctcttacacaca-aagagatacaatatagtgtttcccgtgagacccactcctattcaaatgctattattttataacacctagaagttatagagatgat |
11104532 |
T |
|
| Q |
321 |
acccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
375 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11104531 |
atccacccggtgtatttttcctacactctctggatttactcaacactctattttt |
11104477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 321
Target Start/End: Original strand, 48826701 - 48827000
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnnt-gaacac |
118 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||| |||||||||| |||||| |
|
|
| T |
48826701 |
ttgttgggatcgacgagcttaacgcaattgtaaattaaaatttcaaaattcaa--gagattggatcttgcagcgcagcggtagcgatagaaaaagaacac |
48826798 |
T |
|
| Q |
119 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
218 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48826799 |
caatatttaacgtggaaaatcctctaataccgagggaaaaatcacgggacaa-ctccgaaaaatattccactatattaaagaatattacaatattctctt |
48826897 |
T |
|
| Q |
219 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
318 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
48826898 |
cgctctcttacacacacaagagatacaatatagtgtttcccgtgagattcactcctatttgaatgctattattttatagcacctagaagttatagagatg |
48826997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 48708086 - 48708256
Alignment:
| Q |
48 |
tgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacaccaatatttaacgtggaaaaccctctaata |
147 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||| || | ||| ||| || | || ||||||||||||| || ||||| || ||||| |
|
|
| T |
48708086 |
tgtaaattaaaattccaaaatataaaagaaattgaatcttacaacgcagtggtggcgataaaattaaataccaatatttaacatgaaaaactctataata |
48708185 |
T |
|
| Q |
148 |
ctgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
218 |
Q |
| |
|
|| || |||| |||||| |||||||||| ||||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
48708186 |
ctaagagaaaaaccacgtgacaaactccaaaaaatatttcattatattaaaaaatattacaatattctctc |
48708256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 133 - 290
Target Start/End: Original strand, 24726288 - 24726442
Alignment:
| Q |
133 |
gaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctcacaca |
232 |
Q |
| |
|
||||||| ||||||| ||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || | ||||||||||||| ||||| || | |
|
|
| T |
24726288 |
gaaaaccatctaatatcaagggaaaagccacgagacaaactctgaaaaatattccattatattaaagaacataataatattctctccattctcttaccga |
24726387 |
T |
|
| Q |
233 |
cacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattat |
290 |
Q |
| |
|
||| |||||||| |||| ||||| |||||||||| ||| |||||| |||| |||||| |
|
|
| T |
24726388 |
cac--gagatacactatattgttttccgtgagacc-actcctattcaaatgttattat |
24726442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 20 - 381
Target Start/End: Complemental strand, 12931041 - 12930678
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaaca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
12931041 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaaca |
12930942 |
T |
|
| Q |
118 |
ccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930941 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
12930842 |
T |
|
| Q |
218 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12930841 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttatagagat |
12930742 |
T |
|
| Q |
318 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12930741 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
12930678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 21 - 381
Target Start/End: Complemental strand, 12935786 - 12935424
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||| ||||||| |
|
|
| T |
12935786 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaattcaaaagaaactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
12935687 |
T |
|
| Q |
119 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935686 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
12935587 |
T |
|
| Q |
219 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12935586 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttactctaatgctattattttatagcacctagaagttatagagatg |
12935487 |
T |
|
| Q |
319 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12935486 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
12935424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 26504945 - 26505055
Alignment:
| Q |
114 |
aacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatatt |
213 |
Q |
| |
|
|||| |||||||||||||| || ||| ||||||| ||| ||| ||||| | ||||||||| |||||||||| |||||| |||| |||||||||||||| |
|
|
| T |
26504945 |
aacatcaatatttaacgtg-aataccgtctaataacaaggcaaa-accacagtacaaactccaaaaaatattcaactataataaaaaatattacaatatt |
26505042 |
T |
|
| Q |
214 |
ctctccactctct |
226 |
Q |
| |
|
|| || ||||||| |
|
|
| T |
26505043 |
ctttcaactctct |
26505055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 15589060 - 15588948
Alignment:
| Q |
112 |
tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaata |
211 |
Q |
| |
|
|||||| ||||||||| || ||||||||||| || |||| |||| | || | ||||||||| ||||||||| |||| ||| ||| |||||||||| | |
|
|
| T |
15589060 |
tgaacatcaatatttattttgaaaaaccctctattaatgagagaaaaatcaagtgacaaactctaaaaaatatttcactttatcaaacaatattacaaca |
15588961 |
T |
|
| Q |
212 |
ttctctccactct |
224 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
15588960 |
ttttctccactct |
15588948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 26504850 - 26504895
Alignment:
| Q |
29 |
tcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa |
74 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
26504850 |
tcgacgagtttaatggaagtgtaaattaaaatttcaaaatccaaaa |
26504895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 21 - 381
Target Start/End: Complemental strand, 34907503 - 34907141
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn--tgaacac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |
|
|
| T |
34907503 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
34907404 |
T |
|
| Q |
119 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907403 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
34907304 |
T |
|
| Q |
219 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
34907303 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttatagagatg |
34907204 |
T |
|
| Q |
319 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34907203 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
34907141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 21 - 381
Target Start/End: Original strand, 37040426 - 37040789
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn---tgaaca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
37040426 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaaagactggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
37040525 |
T |
|
| Q |
118 |
ccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37040526 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattttct |
37040625 |
T |
|
| Q |
218 |
ccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagat |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37040626 |
ccactctctcacacacacaagagatacaatatagtgttttccgtgagacctacttctattctaatgctattattttatagcacctagaagttatagagat |
37040725 |
T |
|
| Q |
318 |
gatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37040726 |
gatacccacccgatgtatttttcccacactctctggatttactcaacactctatttttcctctc |
37040789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 15290595 - 15290243
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa-gagattggatcttgcagcacagcggtagcnnnnnnnn---tgaa |
115 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||| |||| |||| |
|
|
| T |
15290595 |
ttgttgggctcgacgagcttaacgcaattgtaaattaaaatttcaaaatccaaaaagagattggatcttgcagcgcagccttagcgataaaaaaaatgaa |
15290496 |
T |
|
| Q |
116 |
caccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattct |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||||| ||| || |||||||||||| ||||||||||||||||||| |
|
|
| T |
15290495 |
caccaatatttaacgtggaaaaccctctaataccgaggtataaaccacgggacaaactccaaaagattttccactatatttaagaatattacaatattct |
15290396 |
T |
|
| Q |
216 |
ctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagag |
315 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||| |||| |||||||||||||||||||| |
|
|
| T |
15290395 |
ctccactctcttacacacacaagagatacaatatagtgttt-ccgtgagacccactcctattcgaatgctat--tatttcagcacctagaagttatagag |
15290299 |
T |
|
| Q |
316 |
atgatacccacccggtgtatttttcccacactctctggatttactcaacactctatt |
372 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
15290298 |
atgatacccacccggtgtattttt-ccacactttctggatttagtcaacactctatt |
15290243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 12099361 - 12099060
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
120 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || || |||| |||| | || |
|
|
| T |
12099361 |
tgttgggctcgacgagtttaacgcgagtgtaaattaaaattccaaaatccaaaagagatatgatcttgcagctcaccgatagcgataaaaatgaaaagca |
12099262 |
T |
|
| Q |
121 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
220 |
Q |
| |
|
|||||| ||||| ||||||||||||| || ||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12099261 |
atattttacgtgaaaaaccctctaatgacgaaggaaaaaccaagggacaaactccgaaaaaatttcaactatattaaagaatattacaatattctctcca |
12099162 |
T |
|
| Q |
221 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
320 |
Q |
| |
|
|||||| |||| ||||||||| ||||||| ||||||| ||||||| ||| |||||| |||| |||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
12099161 |
ctctcttacacgcacaagagacacaatattgtgtttctagtgagactcactcctattcaaatgatattattttataacacctaaaagttatagagatgat |
12099062 |
T |
|
| Q |
321 |
ac |
322 |
Q |
| |
|
|| |
|
|
| T |
12099061 |
ac |
12099060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 169 - 377
Target Start/End: Complemental strand, 12082227 - 12082021
Alignment:
| Q |
169 |
aaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctcacacacacaagagatacaatatagtgtttcccgtgagacct |
268 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| | |||||||||||||||||||||| |||||| |
|
|
| T |
12082227 |
aaactccaaaaaatattccactatattaa-gaatattacaatattttctccactctcttacacggaaaagagatacaatatagtgtttctaatgagactc |
12082129 |
T |
|
| Q |
269 |
acttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactc |
368 |
Q |
| |
|
|| |||||| |||| |||||| ||||||| |||||||||||||||||| ||||| ||||| | |||||||||| | | ||||||||||| |||||||| |
|
|
| T |
12082128 |
gctcctattcaaatgttattattttatagcgcctagaagttatagagataatacctacccgatatatttttccc-ctttttctggatttacccaacactc |
12082030 |
T |
|
| Q |
369 |
tatttttct |
377 |
Q |
| |
|
|| |||||| |
|
|
| T |
12082029 |
taattttct |
12082021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 2757370 - 2757448
Alignment:
| Q |
178 |
aaaatattccactatattaaagaatattacaatattctctccactctctcacacacacaagagatacaatatagtgttt |
256 |
Q |
| |
|
|||||||||||||||||| || |||||| || ||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
2757370 |
aaaatattccactatatttaaaaatattgcactattctctccactctctttcacactcaagagatacaatatagtgttt |
2757448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 12084751 - 12084669
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
103 |
Q |
| |
|
|||||||||| ||||||||||| | || ||||||||||||| |||||||||| ||| ||||||||||| ||| || ||||||| |
|
|
| T |
12084751 |
tgttgggctcaacgagcttaacacgagggtaaattaaaatttcaaaatccaatagacattggatcttgtagcgcaacggtagc |
12084669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 2757236 - 2757273
Alignment:
| Q |
44 |
caagtgtaaattaaaattccaaaatccaaaagagattg |
81 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
2757236 |
caagtgtaaattaaaattccaaaattcaaaagaaattg |
2757273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 19 - 375
Target Start/End: Original strand, 42910991 - 42911346
Alignment:
| Q |
19 |
tttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacac |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||| | | ||||||| |
|
|
| T |
42910991 |
tttgttgggctcgacgagcttaacgcaagtggaaattaaaattttaaaatccaaaagagattagatcttgcagcgcagcggcaacgataaaaatgaacac |
42911090 |
T |
|
| Q |
119 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
218 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
42911091 |
caatatttaacatggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaa-tattccactatatttaagaatattacaatattctctc |
42911189 |
T |
|
| Q |
219 |
cactctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatg |
318 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
42911190 |
cactctctcacacacacaaaagatacaatatagtgtttcccttgagacctacttctattctaatgctattattttatagcaccaagaagttatagagatg |
42911289 |
T |
|
| Q |
319 |
atacccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
375 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
42911290 |
atacccacccagtgtattttttccacactctctggatttactcaacactctattttt |
42911346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 21 - 367
Target Start/End: Original strand, 29106878 - 29107224
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnntgaacacca |
120 |
Q |
| |
|
||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
29106878 |
tgttgggatcgaggagcttaatgcaagtgtaaattaaaattccaaaatccaaaaaagattggatcttgcagcgcagcggtagcgttaaaaatgaacacca |
29106977 |
T |
|
| Q |
121 |
atatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
220 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29106978 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
29107077 |
T |
|
| Q |
221 |
ctctctcacacacacaagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgat |
320 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
29107078 |
ctctcttacacacacaagagatacaa-atagtgtttcccgtgagacctacttctattctaatgctattattttttagcacctagaagttataaagatgat |
29107176 |
T |
|
| Q |
321 |
a-cccacccggtgtatttttcccacactctctggatttactcaacact |
367 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107177 |
accccacccaatgtatttttcccacactctctggatttactcaacact |
29107224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 38997230 - 38997320
Alignment:
| Q |
113 |
gaacaccaatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
203 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||| || |||| || |||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
38997230 |
gaacagcaatattttacgtcgaaaaccctctaatatcgaacgaaaaactacgggacaaactccaaaaaataatccattatattaaagaata |
38997320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 38994698 - 38994779
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggta |
101 |
Q |
| |
|
|||||||||| ||||| ||||| || |||||||||||||||||||||| ||||| | |||||||||||||| |||||||| |
|
|
| T |
38994698 |
ttgttgggcttgacgatcttaatgctagtgtaaattaaaattccaaaacccaaacaaaattggatcttgcagtgcagcggta |
38994779 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 38997137 - 38997193
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaga |
76 |
Q |
| |
|
|||||||| |||| | |||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
38997137 |
ttgttgggttcgaagggcttaatgcgggtgtaaattaaaattccagaatccaaaaga |
38997193 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 381
Target Start/End: Complemental strand, 8539549 - 8539185
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagcnnnnnnnn-tgaacac |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||| | |||||| |
|
|
| T |
8539549 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaattctaaaagagattggatcttgcagcgcagcggtaacaataaaaaatgaacat |
8539450 |
T |
|
| Q |
119 |
caatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
8539449 |
caatatttaacgtggaaaaccctctaataccgagggaaaaatcacgggacaaactccgaaagatattccactatatttaagaatattacaatattatctc |
8539350 |
T |
|
| Q |
219 |
cactctctcacacacacaagagatacaa---tatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagag |
315 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||| |||||||||| ||| |||||| | ||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
8539349 |
cactctcttacacacacaagagatacaatattatagtgttt-ccgtgagacccactcctattcgattgctattattttacagcacctaaaagttatagag |
8539251 |
T |
|
| Q |
316 |
atgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
381 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||| ||||||| |||||| |||||||| |||| |
|
|
| T |
8539250 |
atgatacccatccgatgtatttttcccacactctctgaatttactgaacactatatttttcctctc |
8539185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 238 - 376
Target Start/End: Complemental strand, 51302306 - 51302168
Alignment:
| Q |
238 |
gagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtattt |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
51302306 |
gagatacaatatagtgtttcccgtgagacccactcctattcgaatgcaattgttttatagcacctagaagttatagagatgattcccacccggtgtattt |
51302207 |
T |
|
| Q |
338 |
ttcccacactctctggatttactcaacactctatttttc |
376 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51302206 |
tatccacactctctggatttactcaatactctatttttc |
51302168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 51303020 - 51302937
Alignment:
| Q |
20 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcacagcggtagc |
103 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
51303020 |
ttgttgggatcgacgagcttaatgcaagtgtaaattaaaatttcaaaatccaaaacagattggatcttgcagcgcagcggtagc |
51302937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 51302344 - 51302308
Alignment:
| Q |
112 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302344 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
51302308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 2100199 - 2100379
Alignment:
| Q |
21 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattgga-tcttgcagcacagcggtagcnnnnnnnntgaacacc |
119 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| || | |||||||||| || || |||||| | |
|
|
| T |
2100199 |
tgttgggctcgacgagcttaacacaagtgtaaattaaaattccaaaattcataagagatttgaattttgcagcacaacgataatgataaaattgaacatc |
2100298 |
T |
|
| Q |
120 |
aatatttaacgtggaaaaccctctaatactgagggaaagaccacgggacaaactccgaaaaatattccactatattaaagaata |
203 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||| |||| || ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2100299 |
aatatttaaggtggaaaaccctttaataatgagcgaaaaac---ggggcaaactccgaaaaatattccactatattaaagaata |
2100379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 2100723 - 2100771
Alignment:
| Q |
196 |
aaagaatattacaatattctctccactctctcacacacacaagagatac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
2100723 |
aaagaatattacaatattctctccactctcttacatacacaagagatac |
2100771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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