View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14480_low_25 (Length: 277)
Name: NF14480_low_25
Description: NF14480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14480_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 49755364 - 49755593
Alignment:
| Q |
38 |
atacaaaaacaaaatgagctctgaactaattcacagaaaccaaacaagagatcaaaccacagattcatcatcccatcgtgataatcctcttccaagaacg |
137 |
Q |
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| T |
49755364 |
atacaaaaacaaaatgagttctgaactaattcacagaaaccaaacaagagatcaaaccacagattcatcatcccatcgtgataatcctcttccaagaacg |
49755463 |
T |
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| Q |
138 |
agaaca---------aacatgcttctaaatcgagtccctttccttctcattggaatagcaatttccactttcttcttccactatctcccttctcggtcca |
228 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
49755464 |
agaacaaacatcatcaacatgcttctaaatcgagtccctttccttctcattggaatagcaatttccactttcttcttccactatctcccttctcgatcca |
49755563 |
T |
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| Q |
229 |
ctcttccacaacatcatgactcttcgtcgt |
258 |
Q |
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||||||||||||||||||||||||| |||| |
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| T |
49755564 |
ctcttccacaacatcatgactcttcttcgt |
49755593 |
T |
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