View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14480_low_26 (Length: 275)

Name: NF14480_low_26
Description: NF14480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14480_low_26
NF14480_low_26
[»] chr5 (40 HSPs)
chr5 (1-263)||(26686946-26687191)
chr5 (1-263)||(26956677-26956922)
chr5 (1-121)||(16690564-16690684)
chr5 (1-77)||(884506-884582)
chr5 (1-120)||(38493689-38493809)
chr5 (1-112)||(22098320-22098431)
chr5 (1-120)||(9168055-9168171)
chr5 (9-122)||(14321840-14321953)
chr5 (51-112)||(34940748-34940809)
chr5 (1-41)||(7287156-7287196)
chr5 (1-112)||(40829479-40829590)
chr5 (1-79)||(4088508-4088586)
chr5 (1-75)||(40364633-40364707)
chr5 (1-41)||(5168247-5168287)
chr5 (1-120)||(6758677-6758797)
chr5 (1-41)||(19521970-19522010)
chr5 (1-41)||(33958226-33958266)
chr5 (1-41)||(35567565-35567605)
chr5 (1-41)||(39054651-39054691)
chr5 (4-71)||(41699521-41699588)
chr5 (7-41)||(2972394-2972428)
chr5 (7-80)||(6940077-6940151)
chr5 (7-80)||(9939359-9939433)
chr5 (7-41)||(14051282-14051316)
chr5 (1-46)||(4719715-4719760)
chr5 (9-42)||(22972189-22972222)
chr5 (1-46)||(35634798-35634843)
chr5 (1-41)||(1671606-1671646)
chr5 (1-41)||(7076535-7076575)
chr5 (5-37)||(9226368-9226400)
chr5 (1-33)||(15479533-15479565)
chr5 (2-46)||(18660824-18660868)
chr5 (1-37)||(19952064-19952100)
chr5 (1-41)||(26791211-26791251)
chr5 (1-41)||(28467420-28467460)
chr5 (1-77)||(28597114-28597190)
chr5 (1-41)||(33037584-33037624)
chr5 (5-37)||(34888780-34888812)
chr5 (1-41)||(36739012-36739052)
chr5 (1-37)||(42267410-42267446)
[»] chr2 (47 HSPs)
chr2 (1-122)||(7084600-7084721)
chr2 (1-81)||(36774603-36774683)
chr2 (1-80)||(18737801-18737880)
chr2 (1-120)||(19843549-19843668)
chr2 (1-81)||(33616530-33616612)
chr2 (1-122)||(12070912-12071033)
chr2 (1-123)||(43658596-43658716)
chr2 (17-81)||(45259215-45259279)
chr2 (1-123)||(21738502-21738622)
chr2 (1-81)||(6336317-6336395)
chr2 (1-41)||(1907730-1907770)
chr2 (1-41)||(3838847-3838887)
chr2 (1-125)||(29449276-29449399)
chr2 (1-77)||(37966648-37966724)
chr2 (1-68)||(1040578-1040645)
chr2 (1-112)||(4657366-4657477)
chr2 (1-68)||(42532678-42532745)
chr2 (3-78)||(45420202-45420277)
chr2 (1-122)||(14328446-14328567)
chr2 (1-41)||(9194305-9194345)
chr2 (1-45)||(9990755-9990799)
chr2 (1-81)||(16799737-16799816)
chr2 (2-46)||(18846676-18846720)
chr2 (2-81)||(40599207-40599284)
chr2 (2-41)||(7664033-7664072)
chr2 (1-112)||(40700260-40700371)
chr2 (1-39)||(13766278-13766316)
chr2 (7-41)||(34945057-34945091)
chr2 (1-75)||(36190954-36191028)
chr2 (5-78)||(3771440-3771513)
chr2 (1-78)||(6842489-6842564)
chr2 (8-41)||(7503964-7503997)
chr2 (6-43)||(29361089-29361126)
chr2 (1-42)||(32477396-32477437)
chr2 (1-41)||(5361858-5361898)
chr2 (1-41)||(7698235-7698275)
chr2 (1-41)||(9207654-9207694)
chr2 (1-41)||(9647196-9647236)
chr2 (1-41)||(18254176-18254216)
chr2 (2-42)||(18300823-18300863)
chr2 (1-41)||(19109060-19109100)
chr2 (1-41)||(19642662-19642702)
chr2 (1-41)||(22416277-22416317)
chr2 (1-41)||(27490697-27490737)
chr2 (1-33)||(31296602-31296634)
chr2 (1-41)||(39147830-39147870)
chr2 (1-41)||(44977466-44977506)
[»] chr7 (53 HSPs)
chr7 (1-117)||(35822865-35822981)
chr7 (1-81)||(40854581-40854661)
chr7 (1-81)||(47954028-47954108)
chr7 (1-80)||(47012497-47012576)
chr7 (1-80)||(48145589-48145668)
chr7 (1-122)||(42584867-42584988)
chr7 (1-125)||(41430034-41430158)
chr7 (1-78)||(26018105-26018182)
chr7 (1-112)||(34507101-34507212)
chr7 (1-69)||(4292492-4292560)
chr7 (1-41)||(31445382-31445422)
chr7 (2-78)||(41590012-41590088)
chr7 (1-80)||(42598135-42598214)
chr7 (2-112)||(41590415-41590525)
chr7 (1-75)||(46260024-46260098)
chr7 (1-66)||(1504302-1504367)
chr7 (1-42)||(18505838-18505879)
chr7 (1-38)||(18856534-18856571)
chr7 (7-112)||(31398195-31398300)
chr7 (1-78)||(36352514-36352591)
chr7 (1-78)||(44496732-44496809)
chr7 (8-41)||(45420027-45420060)
chr7 (1-66)||(47356048-47356113)
chr7 (1-41)||(3683596-3683636)
chr7 (1-41)||(27568082-27568122)
chr7 (1-41)||(38861160-38861200)
chr7 (1-41)||(48062121-48062161)
chr7 (1-68)||(9363452-9363519)
chr7 (7-42)||(32453564-32453599)
chr7 (7-80)||(1471218-1471292)
chr7 (1-39)||(22540994-22541032)
chr7 (8-46)||(46578097-46578135)
chr7 (7-41)||(46812872-46812906)
chr7 (7-80)||(46829549-46829623)
chr7 (8-80)||(4225823-4225896)
chr7 (9-78)||(10700116-10700184)
chr7 (6-43)||(42926208-42926245)
chr7 (1-38)||(43159544-43159581)
chr7 (1-33)||(22817003-22817035)
chr7 (1-41)||(24532909-24532949)
chr7 (7-43)||(31844570-31844606)
chr7 (1-61)||(33775003-33775063)
chr7 (5-41)||(35072329-35072365)
chr7 (5-41)||(35098670-35098706)
chr7 (1-37)||(38218322-38218358)
chr7 (1-41)||(38340349-38340389)
chr7 (1-41)||(38956585-38956625)
chr7 (1-41)||(40112921-40112961)
chr7 (1-41)||(41018728-41018768)
chr7 (1-41)||(41989709-41989749)
chr7 (1-41)||(43942701-43942741)
chr7 (1-41)||(46095015-46095055)
chr7 (1-41)||(49069314-49069354)
[»] chr8 (47 HSPs)
chr8 (1-120)||(35067225-35067344)
chr8 (1-121)||(41639684-41639806)
chr8 (1-119)||(6440146-6440264)
chr8 (1-119)||(5574320-5574438)
chr8 (1-112)||(43715939-43716050)
chr8 (1-112)||(45405596-45405707)
chr8 (8-81)||(6972226-6972299)
chr8 (1-78)||(25830175-25830252)
chr8 (1-112)||(12655987-12656098)
chr8 (18-81)||(13970998-13971061)
chr8 (17-80)||(42619908-42619971)
chr8 (1-78)||(38675668-38675745)
chr8 (54-123)||(39453201-39453270)
chr8 (1-117)||(3413083-3413199)
chr8 (1-112)||(67056-67167)
chr8 (1-112)||(33539470-33539581)
chr8 (1-80)||(43285890-43285969)
chr8 (2-78)||(36612008-36612084)
chr8 (1-67)||(10902769-10902835)
chr8 (1-39)||(24798326-24798364)
chr8 (1-38)||(2621850-2621887)
chr8 (1-121)||(3270767-3270885)
chr8 (1-78)||(8671485-8671562)
chr8 (1-46)||(33279510-33279555)
chr8 (1-41)||(5740752-5740792)
chr8 (1-41)||(10692503-10692543)
chr8 (1-41)||(10731610-10731650)
chr8 (1-45)||(31249487-31249531)
chr8 (1-32)||(37942882-37942913)
chr8 (1-117)||(42786548-42786666)
chr8 (7-41)||(6445247-6445281)
chr8 (12-78)||(35792114-35792180)
chr8 (1-79)||(37133791-37133869)
chr8 (5-71)||(38585470-38585536)
chr8 (11-41)||(45405950-45405980)
chr8 (1-42)||(2020610-2020651)
chr8 (18-111)||(33100367-33100460)
chr8 (1-67)||(44415754-44415822)
chr8 (1-41)||(7777146-7777186)
chr8 (1-41)||(10592247-10592287)
chr8 (1-41)||(11134661-11134701)
chr8 (1-41)||(22719504-22719544)
chr8 (5-37)||(22811487-22811519)
chr8 (1-41)||(23754673-23754713)
chr8 (7-43)||(34718185-34718221)
chr8 (1-41)||(36816583-36816623)
chr8 (1-33)||(37754626-37754658)
[»] chr3 (61 HSPs)
chr3 (1-123)||(36755935-36756057)
chr3 (1-121)||(1436881-1437001)
chr3 (1-81)||(48353061-48353141)
chr3 (2-121)||(51698924-51699043)
chr3 (1-81)||(52714798-52714878)
chr3 (8-81)||(19150246-19150319)
chr3 (1-121)||(33796331-33796451)
chr3 (1-121)||(54099243-54099363)
chr3 (1-121)||(29780962-29781082)
chr3 (1-81)||(49021776-49021856)
chr3 (1-78)||(52485537-52485614)
chr3 (20-119)||(43720463-43720561)
chr3 (1-112)||(49761082-49761193)
chr3 (1-80)||(45657697-45657776)
chr3 (1-79)||(50559141-50559218)
chr3 (1-41)||(39338694-39338734)
chr3 (1-105)||(45186454-45186558)
chr3 (1-77)||(48944641-48944717)
chr3 (1-79)||(35377010-35377088)
chr3 (1-39)||(39629807-39629845)
chr3 (1-78)||(9311105-9311182)
chr3 (7-112)||(37894137-37894242)
chr3 (8-41)||(41443157-41443190)
chr3 (1-41)||(5114142-5114182)
chr3 (1-41)||(6178392-6178432)
chr3 (1-41)||(26014876-26014916)
chr3 (1-37)||(26452693-26452729)
chr3 (1-61)||(28539687-28539747)
chr3 (1-41)||(35597226-35597266)
chr3 (1-112)||(47742349-47742458)
chr3 (1-41)||(52326083-52326123)
chr3 (2-41)||(20547957-20547996)
chr3 (1-39)||(16969535-16969573)
chr3 (7-80)||(29573283-29573357)
chr3 (11-41)||(31104739-31104769)
chr3 (11-41)||(32145952-32145982)
chr3 (7-41)||(41309187-41309221)
chr3 (8-41)||(9692797-9692830)
chr3 (7-112)||(16479703-16479808)
chr3 (1-46)||(28700525-28700570)
chr3 (24-81)||(29916954-29917011)
chr3 (24-81)||(29966107-29966164)
chr3 (1-46)||(34456855-34456900)
chr3 (1-42)||(34627847-34627888)
chr3 (1-78)||(52100325-52100402)
chr3 (1-41)||(288790-288830)
chr3 (1-41)||(5244293-5244333)
chr3 (1-41)||(19149054-19149094)
chr3 (10-42)||(24256737-24256769)
chr3 (5-37)||(26672466-26672498)
chr3 (1-41)||(27541469-27541509)
chr3 (1-41)||(33791737-33791777)
chr3 (1-41)||(38926692-38926732)
chr3 (1-41)||(41505555-41505595)
chr3 (1-41)||(42358605-42358645)
chr3 (1-41)||(45000127-45000167)
chr3 (1-33)||(45205341-45205373)
chr3 (1-33)||(45711414-45711446)
chr3 (1-41)||(46623971-46624011)
chr3 (1-41)||(50314689-50314729)
chr3 (1-41)||(55361200-55361240)
[»] chr1 (48 HSPs)
chr1 (1-102)||(49570061-49570162)
chr1 (2-121)||(29359809-29359928)
chr1 (1-121)||(34817931-34818051)
chr1 (1-120)||(30745051-30745170)
chr1 (1-120)||(30766502-30766621)
chr1 (1-118)||(49020295-49020410)
chr1 (2-81)||(23665652-23665731)
chr1 (9-122)||(29877370-29877483)
chr1 (1-121)||(52437559-52437679)
chr1 (1-112)||(12999718-12999829)
chr1 (1-112)||(49931618-49931729)
chr1 (1-46)||(9988016-9988061)
chr1 (1-81)||(36750411-36750489)
chr1 (2-79)||(44723426-44723503)
chr1 (1-78)||(50242375-50242452)
chr1 (1-121)||(33076184-33076304)
chr1 (1-41)||(33100872-33100912)
chr1 (5-77)||(49559131-49559203)
chr1 (1-41)||(50726215-50726255)
chr1 (15-66)||(52261418-52261469)
chr1 (1-79)||(18434859-18434937)
chr1 (1-78)||(8454609-8454686)
chr1 (1-42)||(10627776-10627817)
chr1 (1-78)||(11597701-11597778)
chr1 (1-41)||(23645475-23645515)
chr1 (1-41)||(44519118-44519158)
chr1 (1-41)||(51080057-51080097)
chr1 (1-112)||(30973617-30973728)
chr1 (1-80)||(740881-740962)
chr1 (1-78)||(1689456-1689531)
chr1 (7-41)||(19055726-19055760)
chr1 (1-39)||(27533453-27533491)
chr1 (7-41)||(35369770-35369804)
chr1 (1-112)||(49446689-49446804)
chr1 (1-79)||(50775085-50775163)
chr1 (1-78)||(11947860-11947937)
chr1 (1-42)||(43775270-43775311)
chr1 (1-46)||(48261204-48261249)
chr1 (1-46)||(49065326-49065371)
chr1 (8-41)||(49647117-49647150)
chr1 (5-81)||(51466835-51466911)
chr1 (1-41)||(649833-649873)
chr1 (1-41)||(14983837-14983877)
chr1 (1-41)||(31088245-31088285)
chr1 (1-41)||(39849120-39849160)
chr1 (1-41)||(41677291-41677331)
chr1 (1-41)||(51718593-51718633)
chr1 (1-41)||(52576269-52576309)
[»] chr4 (49 HSPs)
chr4 (1-123)||(16019541-16019663)
chr4 (1-123)||(34757793-34757915)
chr4 (1-123)||(34759067-34759189)
chr4 (18-120)||(47015087-47015189)
chr4 (1-128)||(31574825-31574946)
chr4 (1-105)||(46665097-46665201)
chr4 (1-112)||(49585059-49585170)
chr4 (1-81)||(38792817-38792896)
chr4 (1-111)||(44257626-44257736)
chr4 (1-78)||(1795911-1795988)
chr4 (1-46)||(7632423-7632468)
chr4 (1-78)||(11546830-11546907)
chr4 (4-121)||(15522422-15522539)
chr4 (17-78)||(19165362-19165423)
chr4 (1-46)||(19232095-19232140)
chr4 (1-78)||(25221654-25221731)
chr4 (1-78)||(38381006-38381083)
chr4 (1-78)||(50980655-50980732)
chr4 (7-66)||(35874844-35874903)
chr4 (1-68)||(36123399-36123466)
chr4 (1-78)||(12595560-12595637)
chr4 (1-46)||(27354316-27354361)
chr4 (1-38)||(31559603-31559640)
chr4 (1-46)||(50890035-50890080)
chr4 (1-41)||(11068752-11068792)
chr4 (1-41)||(12387632-12387672)
chr4 (1-41)||(26910266-26910306)
chr4 (1-41)||(37997318-37997358)
chr4 (5-112)||(48649587-48649694)
chr4 (1-39)||(26908052-26908090)
chr4 (7-80)||(37514059-37514133)
chr4 (5-46)||(336769-336810)
chr4 (1-38)||(5249933-5249970)
chr4 (8-41)||(5386444-5386477)
chr4 (8-41)||(39440555-39440588)
chr4 (9-78)||(50831685-50831754)
chr4 (8-41)||(51577686-51577719)
chr4 (7-112)||(55609060-55609165)
chr4 (7-39)||(3316421-3316453)
chr4 (5-37)||(9362650-9362682)
chr4 (1-41)||(10250482-10250522)
chr4 (7-79)||(24575780-24575852)
chr4 (1-41)||(26732289-26732329)
chr4 (1-41)||(31641532-31641572)
chr4 (1-45)||(36177970-36178014)
chr4 (1-41)||(37297113-37297153)
chr4 (1-41)||(38134417-38134457)
chr4 (1-41)||(40348858-40348898)
chr4 (1-41)||(50721711-50721751)
[»] scaffold0662 (1 HSPs)
scaffold0662 (18-120)||(1226-1328)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-112)||(12562-12673)
[»] chr6 (19 HSPs)
chr6 (1-92)||(13423033-13423124)
chr6 (1-79)||(16328628-16328706)
chr6 (1-79)||(16367975-16368053)
chr6 (1-78)||(28630163-28630240)
chr6 (1-79)||(16337851-16337929)
chr6 (1-46)||(24900838-24900883)
chr6 (1-78)||(33651085-33651162)
chr6 (1-41)||(5694118-5694158)
chr6 (1-41)||(6271414-6271454)
chr6 (1-41)||(22079530-22079570)
chr6 (7-41)||(8990978-8991012)
chr6 (7-41)||(9015425-9015459)
chr6 (1-67)||(16352101-16352167)
chr6 (9-78)||(31883233-31883302)
chr6 (1-41)||(552857-552897)
chr6 (1-41)||(17551345-17551385)
chr6 (1-41)||(18737534-18737574)
chr6 (1-41)||(25811805-25811845)
chr6 (1-41)||(26595413-26595453)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-78)||(94811-94888)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-41)||(10930-10970)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-46)||(20863-20908)


Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 26686946 - 26687191
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||| | |||||||||||| |||||||||||||||||| || ||| ||||||||||||    
T  26686946 attatatttttactttctctct--attgttttgatttttgtatcaaca-atacttttctttgtaaaaatatggttgtcaatgtagttgtcaatcaaatta 26687042  T
Q  101 atgttgaaataagattgctctttatttagtgatagcataaacgccgtgtacgactggtaacagaaaattcaatttatgggcaaataagttgtattgtagg 200  Q
    ||||| |||||| |||             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26687043 atgtt-aaataatatt-------------tgatagcagaaacgccgtgtacgactggtaacagaaaattcaatttatgggcaaataagttgtattggagg 26687128  T
Q  201 tatgttatgaaatcaacatcgtgctaacctacacgatagggtggtccttttcctttagtttat 263  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26687129 tgtgttatgaaatcaacatcgtgctaacctacacgatagggtggtccttttcctttagtttat 26687191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 26956677 - 26956922
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||| | |||||||||||| |||||||||||||||||| || ||| ||||||||||||    
T  26956677 attatatttttactttctctct--attgttttgatttttgtatcaaca-atacttttctttgtaaaaatatggttgtcaatgtagttgtcaatcaaatta 26956773  T
Q  101 atgttgaaataagattgctctttatttagtgatagcataaacgccgtgtacgactggtaacagaaaattcaatttatgggcaaataagttgtattgtagg 200  Q
    ||||| |||||| |||             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26956774 atgtt-aaataatatt-------------tgatagcagaaacgccgtgtacgactggtaacagaaaattcaatttatgggcaaataagttgtattggagg 26956859  T
Q  201 tatgttatgaaatcaacatcgtgctaacctacacgatagggtggtccttttcctttagtttat 263  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26956860 tgtgttatgaaatcaacatcgtgctaacctacacgatagggtggtccttttcctttagtttat 26956922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 16690564 - 16690684
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||| ||||||||| |||| ||||||| |||| | |||||||||||| |||||||||||||||||| |||||| |||| ||||||     
T  16690564 attatatttttactttctttctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtcaaccaaattg 16690663  T
Q  101 atgttgaaataagattgctct 121  Q
    || || |||||| ||||||||    
T  16690664 atattcaaataacattgctct 16690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 884506 - 884582
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgt 77  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| | ||||||||| || |||||||||||||||    
T  884506 attatatttttactttctctttctattgttttgatttttgtgccaacacatacttttcattgtaaaaatatggttgt 884582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 38493689 - 38493809
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt-gtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatt 99  Q
    |||||| ||||||||| ||||||||||| |||||||||| || |||| | |||||||||||| | ||||||||| |||||| |||||| |||| ||||||    
T  38493689 attataattttactttatctctctattgctttgattttttgtgccaacacatacttttctttgttaaaatatgggtgtcaatgtggttgtcaaccaaatt 38493788  T
Q  100 aatgttgaaataagattgctc 120  Q
     ||||| |||||| |||||||    
T  38493789 gatgttcaaataacattgctc 38493809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22098320 - 22098431
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | |||||||||||| ||||||| |||||||| |  |  ||||||| ||||||     
T  22098320 attatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtccatttaattatcaagcaaattg 22098419  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  22098420 atgttcaaataa 22098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 9168171 - 9168055
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||| |||||||||  |||| |||| ||||||| |||| | |||||||||||| | |||||||| |||||||  ||||| |||| ||||||     
T  9168171 attatatttttattttctctct--attgctttggtttttgtgccaacacatacttttctttgt-aaaatatgattgtcaatatggttgtcaaccaaattg 9168075  T
Q  101 atgttgaaataagattgctc 120  Q
    ||||| |||||| |||||||    
T  9168074 atgttcaaataacattgctc 9168055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 14321953 - 14321840
Alignment:
Q  9 tttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaa 108  Q
    |||| ||||||||||||||| |||| ||||  || ||| | ||| |||||||| ||||| |||||||||| |  ||||| ||||| ||||| ||||| ||    
T  14321953 tttattttctctctctattgctttggttttcatatcaatacataattttctttgtaaaagtatggttgtccatatggttgtcaattaaattgatgttcaa 14321854  T
Q  109 ataagattgctctt 122  Q
    |||| |||||||||    
T  14321853 ataaaattgctctt 14321840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 34940748 - 34940809
Alignment:
Q  51 tacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaaataa 112  Q
    |||||||||||||||||||||| ||||||| |||||| |||| |||||| ||||| ||||||    
T  34940748 tacttttctttataaaaatatgattgtcaatgtggttgtcaaccaaattgatgttcaaataa 34940809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7287196 - 7287156
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  7287196 attatatttttactttctctctctattgttttggtttttgt 7287156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 40829479 - 40829590
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| ||||||||||  ||| ||||| || | || | |||||||||||||| ||||| | ||||||||  ||||| |||  |||| ||    
T  40829479 attatatttttactttatctctctattactttaattttcgtgctaatacatacttttctttatgaaaatttagttgtcaatttggttgtcacacaaagta 40829578  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  40829579 atgttcaaataa 40829590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4088508 - 4088586
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    |||||||||||||||||| ||||||||| |||| |||| || | || | |||| ||||||| |||||||||| ||||||    
T  4088508 attatatttttactttctttctctattgctttggttttcgtgctaatacatacatttctttgtaaaaatatgattgtca 4088586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 40364633 - 40364707
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggtt 75  Q
    ||||||||| |||||||||||||||||  |||||||||||| || |   |||||||||||| |||||| ||||||    
T  40364633 attatatttctactttctctctctattactttgatttttgtgccgatgtatacttttctttctaaaaacatggtt 40364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5168247 - 5168287
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  5168247 attatctttttactttctctctctattgctttgatttttgt 5168287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 6758797 - 6758677
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttcttt-ataaaaatatggttgtcaacgtggttatcaatcaaatt 99  Q
    |||||||||||| ||| ||||||||||| |||| |||| ||  ||| | ||  |||||||| | ||||| ||||||||| | |||||| ||||||| |||    
T  6758797 attatatttttattttatctctctattgctttggttttcgtgtcaatacatgattttctttgaaaaaaaaatggttgtccatgtggttgtcaatcatatt 6758698  T
Q  100 aatgttgaaataagattgctc 120  Q
     ||||| |||||| |||||||    
T  6758697 gatgttcaaataacattgctc 6758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19522010 - 19521970
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  19522010 attatctttttactttctctctctattgctttgatttttgt 19521970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33958266 - 33958226
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  33958266 attatatttttactttctctctctattgctttggtttttgt 33958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35567565 - 35567605
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  35567565 attatatttttactttctctctctattgctttgaattttgt 35567605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39054651 - 39054691
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  39054651 attatgtttttactttctctctctattgctttgatttttgt 39054691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 41699521 - 41699588
Alignment:
Q  4 atatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatat 71  Q
    ||||||||||||||||||||||||  ||||||||| ||  ||| | ||| |||||||| |||||||||    
T  41699521 atatttttactttctctctctattaatttgattttcgtgtcaatacataattttctttgtaaaaatat 41699588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 2972394 - 2972428
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||| ||||||||||||    
T  2972394 tttttactttctctctctattgctttgatttttgt 2972428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 6940151 - 6940077
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatactttt-ctttataaaaatatggttgtcaa 80  Q
    |||||||||| ||||||||||| ||||||||| || ||||||  ||||||| |||| ||||  ||||||||||||    
T  6940151 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaa 6940077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 9939433 - 9939359
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatactttt-ctttataaaaatatggttgtcaa 80  Q
    |||||||||| ||||||||||| ||||||||| || ||||||  ||||||| |||| ||||  ||||||||||||    
T  9939433 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaa 9939359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 14051316 - 14051282
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  14051316 tttttactttctctctctattgttttggtttttgt 14051282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4719715 - 4719760
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||||||| ||||||||||| |||||||||||| ||||    
T  4719715 attatgtttttactttttctctctattgctttgatttttgtgccaa 4719760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 22972189 - 22972222
Alignment:
Q  9 tttactttctctctctattgttttgatttttgta 42  Q
    ||||||||||||||||||||||||| ||||||||    
T  22972189 tttactttctctctctattgttttggtttttgta 22972222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35634843 - 35634798
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||| |||||||||||||||||||| ||||||| ||||    
T  35634843 attatctttttagtttctctctctattgttttggtttttgtgccaa 35634798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1671606 - 1671646
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||| |||||||||||| |||||||    
T  1671606 attatctttttactttctctttctattgttttggtttttgt 1671646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7076575 - 7076535
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  7076575 attatttttttactttctctctctattgctttggtttttgt 7076535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 9226368 - 9226400
Alignment:
Q  5 tatttttactttctctctctattgttttgattt 37  Q
    |||||||||||| ||||||||||||||||||||    
T  9226368 tatttttactttatctctctattgttttgattt 9226400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15479533 - 15479565
Alignment:
Q  1 attatatttttactttctctctctattgttttg 33  Q
    ||||| |||||||||||||||||||||||||||    
T  15479533 attatctttttactttctctctctattgttttg 15479565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 18660824 - 18660868
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    |||| |||||||||||||||||||||| |||| ||||||| ||||    
T  18660824 ttatctttttactttctctctctattgctttggtttttgtgccaa 18660868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19952064 - 19952100
Alignment:
Q  1 attatatttttactttctctctctattgttttgattt 37  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  19952064 attatgtttttactttctatctctattgttttgattt 19952100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26791251 - 26791211
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  26791251 attatctttttactttctctctctattgctttggtttttgt 26791211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28467460 - 28467420
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||| ||||||||||||| |||||||    
T  28467460 attatctttttactttctcactctattgttttggtttttgt 28467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28597190 - 28597114
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgt 77  Q
    ||||| |||||| ||| ||||| |||| |||||||||| ||| ||| |  ||||||||||||||||  |||||||||    
T  28597190 attatgtttttattttttctctatattattttgattttcgtatcaatatttacttttctttataaatttatggttgt 28597114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33037584 - 33037624
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  33037584 attatctttttactttttctctctattgctttgatttttgt 33037624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 34888812 - 34888780
Alignment:
Q  5 tatttttactttctctctctattgttttgattt 37  Q
    |||||||||||| ||||||||||||||||||||    
T  34888812 tatttttactttatctctctattgttttgattt 34888780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36739012 - 36739052
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  36739012 attatctttttactttctctctctattgctttggtttttgt 36739052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42267410 - 42267446
Alignment:
Q  1 attatatttttactttctctctctattgttttgattt 37  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  42267410 attatatttttactttatctctctattgttatgattt 42267446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 7084721 - 7084600
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||| |||||||||| ||||||| |||||| |||| ||||||     
T  7084721 attatatttttactttctctttctattgctttgatttttgtaccaacacatacttttctttgtaaaaatatgattgtcaatgtggttgtcaaccaaattg 7084622  T
Q  101 atgttgaaataagattgctctt 122  Q
    ||||| |||||| |||||||||    
T  7084621 atgttcaaataacattgctctt 7084600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36774603 - 36774683
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||||||||    
T  36774603 attatatttttactttctctctctattgctttgattttagtactaatagatacttttctttataaaaatatggttgtcaac 36774683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18737880 - 18737801
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  18737880 attatatttttactttctttctttattgttttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaa 18737801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19843549 - 19843668
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||| | |||||||||||| |||||||||  |||||||  || || |||| ||||||     
T  19843549 attatatttttcctttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatataattgtcaatatgattgtcaaccaaattg 19843648  T
Q  101 atgttgaaataagattgctc 120  Q
    ||||| |||||| |||||||    
T  19843649 atgttcaaataacattgctc 19843668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33616530 - 33616612
Alignment:
Q  1 attatatttttactttctc--tctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  33616530 attatatttttactttctctctctctattgctttgatttttgtaccaacacatacttttctttgtaaaaatatggttgtcaac 33616612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 12070912 - 12071033
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||| ||||||| ||||||||| ||  ||| | ||  |||||||| |||||| ||||||||| | |||||| ||||||| |||     
T  12070912 attatatttttactttctctttctattgctttgattttcgtgtcaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaatcacattg 12071011  T
Q  101 atgttgaaataagattgctctt 122  Q
    ||||| |||||| |||||||||    
T  12071012 atgttcaaataacattgctctt 12071033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43658716 - 43658596
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||| |  ||  ||||||||||| | || | |||||||||||| |||||| || ||||||||  ||||| |||| |||||||    
T  43658716 attatatttttactttctctctgt--tgcattgatttttgtgctaatacatacttttctttgtaaaaaaatagttgtcaatatggttgtcaaccaaatta 43658619  T
Q  101 atgttgaaataagattgctcttt 123  Q
    ||||| |||||| ||||||||||    
T  43658618 atgttcaaataacattgctcttt 43658596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 45259279 - 45259215
Alignment:
Q  17 ctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||| ||||||||||||||||| | |||||||||||| |||||||||| ||||||||    
T  45259279 ctctctctattgctttgatttttgtaccaacacatacttttctttgtaaaaatatgtttgtcaac 45259215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 21738622 - 21738502
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||  ||| || |||| |||| ||||||| |||| | ||| |||||||| |||||||||| ||||||| || ||| |||| ||||||     
T  21738622 attatatttttactt--tctttcaattgctttggtttttgtgccaacacatatttttctttgtaaaaatatgattgtcaatgtcgttgtcaaccaaattg 21738525  T
Q  101 atgttgaaataagattgctcttt 123  Q
    ||||| |||||| ||||||||||    
T  21738524 atgttcaaataacattgctcttt 21738502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6336317 - 6336395
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||| |||||||||  || | |||| ||||||| |||| | |||||||||||| |||||||||||||||||||    
T  6336317 attatatttttattttctctct--atcgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaac 6336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1907770 - 1907730
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  1907770 attatgtttttactttctctctctattgttttgatttttgt 1907730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3838887 - 3838847
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  3838887 attatctttttactttctctctctattgttttgatttttgt 3838847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 29449276 - 29449399
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  |||||||||||| | ||   |||||||||||| |||||| || |||||| |  ||||| |||| |||||      
T  29449276 attatatttttactttctctctctattactttgatttttgtgcaaatgcatacttttctttgtaaaaacat-gttgtctatttggttgtcaagcaaatag 29449374  T
Q  101 atgttgaaataagattgctctttat 125  Q
    ||||| |||||| | | ||||||||    
T  29449375 atgttcaaataacactactctttat 29449399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37966648 - 37966724
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgt 77  Q
    |||||||||||||||| ||||||||||  ||  |||||| ||| || | |||||||||||||||| |||||||||||    
T  37966648 attatatttttactttttctctctattacttaaatttttatacaaatacatacttttctttataataatatggttgt 37966724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1040578 - 1040645
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaa 68  Q
    |||||||||||| ||||||| ||||||  |||||||||||| |||| | |||||||||||| ||||||    
T  1040578 attatatttttattttctctttctattactttgatttttgtgccaatacatacttttctttgtaaaaa 1040645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4657366 - 4657477
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  |||||| ||| | |||| | | | |||||||| ||||||| || ||||| |  ||||| |||| ||||||     
T  4657366 attatatttttactttctctctctattactttgatatttatgccaatacacaattttctttgtaaaaatgtgattgtccatttggttgtcaagcaaattg 4657465  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  4657466 atgttcaaataa 4657477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42532745 - 42532678
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaa 68  Q
    |||||||||||||||| ||||||||||  ||||||||| || |||| | ||| |||||||||||||||    
T  42532745 attatatttttactttatctctctattactttgattttcgtgccaatacatatttttctttataaaaa 42532678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 45420202 - 45420277
Alignment:
Q  3 tatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||| ||||||||  |||||| ||||| |||| | ||| |||||||| ||||||| ||||||||    
T  45420202 tatatttttactttctttctctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtc 45420277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 14328446 - 14328567
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||| ||| ||||||||| ||  ||| | ||  |||||||  |||||||||  ||||| | |||||| ||||||| | |     
T  14328446 attatatttttactttctctctctgttgctttgattttcgtgtcaatacatgattttcttagtaaaaatataattgtccatgtggttgtcaatcacaatg 14328545  T
Q  101 atgttgaaataagattgctctt 122  Q
    ||||| |||||| | |||||||    
T  14328546 atgttcaaataacactgctctt 14328567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9194305 - 9194345
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  9194305 attatctttttactttctctctctattgttttggtttttgt 9194345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9990755 - 9990799
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtacca 45  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  9990755 attatctttttactttctctctctattgctttggtttttgtacca 9990799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16799737 - 16799816
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||| ||||||||||| ||  || ||||||||| | || |  ||||||||||| |||||||||||||||||||    
T  16799737 attatatttttattttctctctcttttcctt-gatttttgtgctaacacgtacttttctttgtaaaaatatggttgtcaac 16799816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 18846676 - 18846720
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    |||| |||||||||||||||||||||  |||||||||||||||||    
T  18846676 ttatgtttttactttctctctctattactttgatttttgtaccaa 18846720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 40599284 - 40599207
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||  || ||| |||| ||| |||||||||| ||||||||    
T  40599284 ttatatttttactttctctctatattgctttggtttttgtgcc--aacatatttttttttgtaaaaatatgattgtcaac 40599207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 7664072 - 7664033
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  7664072 ttatatttttactttctctctctattgctttggtttttgt 7664033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 40700260 - 40700371
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| ||||||||||  ||||||||| ||  ||| | ||| |||| |||||||||| ||| ||||| |  ||||| |||| |||||      
T  40700260 attatatttttactttatctctctattactttgattttcgtgtcaatatatatttttttttataaaaacatgattgtctatttggttgtcaagcaaatag 40700359  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  40700360 atgttcaaataa 40700371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13766316 - 13766278
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt 39  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  13766316 attatgtttttactttctctctctattgttttgtttttt 13766278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 34945091 - 34945057
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||| ||||||||||||    
T  34945091 tttttactttctctctctattgctttgatttttgt 34945057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36191028 - 36190954
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggtt 75  Q
    |||||||||||||||| ||||||||||  ||| |||||  || ||| |||| ||||||||| |||||| ||||||    
T  36191028 attatatttttactttatctctctattactttaattttcatatcaatagatgcttttctttgtaaaaacatggtt 36190954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 3771440 - 3771513
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||| ||||||||||||||||  |||||| |||||  ||| |  ||||||||||| ||||||| ||||||||    
T  3771440 tattttcactttctctctctattactttgatatttgtgtcaatacgtacttttctttgtaaaaatgtggttgtc 3771513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6842564 - 6842489
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||| |||| |||||||||  ||| ||||||||||||| | |||||||| |||||||||| ||| |||||    
T  6842564 attatattttta-tttc-ctctctattactttaatttttgtaccaatacatacttttttttataaaaacatgattgtc 6842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 7503964 - 7503997
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||| |||||||||||||||||||||||    
T  7503964 ttttactttccctctctattgttttgatttttgt 7503997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 29361089 - 29361126
Alignment:
Q  6 atttttactttctctctctattgttttgatttttgtac 43  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  29361089 atttttactttatctctctattgctttgatttttgtac 29361126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32477396 - 32477437
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgta 42  Q
    ||||| |||||||||||||||| ||||| |||||||||||||    
T  32477396 attatctttttactttctctctatattgctttgatttttgta 32477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5361858 - 5361898
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||| | |||||||||||| |||||||    
T  5361858 attatatttttactttctttttctattgttttggtttttgt 5361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7698235 - 7698275
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||| ||||||| ||||||||||||    
T  7698235 attatttttttactttctctttctattgctttgatttttgt 7698275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9207654 - 9207694
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  9207654 attatttttttactttctctctctattgctttggtttttgt 9207694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9647196 - 9647236
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  9647196 attatctttttactttctctctctattgctttggtttttgt 9647236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18254216 - 18254176
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  18254216 attatctttttactttctctctctattgctttggtttttgt 18254176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 18300823 - 18300863
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgta 42  Q
    |||||||||||  || |||||||||||||||||||||||||    
T  18300823 ttatatttttatattgtctctctattgttttgatttttgta 18300863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19109100 - 19109060
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||| ||||||||||||||| ||||||||||||    
T  19109100 attatctttttattttctctctctattgctttgatttttgt 19109060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19642662 - 19642702
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||| ||||||||||||||||| ||||||||||||    
T  19642662 attatgttttcactttctctctctattgctttgatttttgt 19642702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22416277 - 22416317
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  22416277 attatctttttactttctctctctattgctttggtttttgt 22416317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27490737 - 27490697
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||| ||||||||||||||| ||||||||||||    
T  27490737 attatgtttttaatttctctctctattgctttgatttttgt 27490697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31296602 - 31296634
Alignment:
Q  1 attatatttttactttctctctctattgttttg 33  Q
    |||||||||||||||||| ||||||||||||||    
T  31296602 attatatttttactttctgtctctattgttttg 31296634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39147830 - 39147870
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||| | ||||||||||||||||||    
T  39147830 attatgtttttactttctctttgtattgttttgatttttgt 39147870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44977506 - 44977466
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  44977506 attatgtttttactttctctctctattgctttggtttttgt 44977466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35822981 - 35822865
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||||| |||| ||||||     
T  35822981 attatatttttactttctctctctattgctttgatttttgtgccaatacatatttttctttgtaaaaatatggttgtcaacgtggttgtcaaccaaattg 35822882  T
Q  101 atgttgaaataagattg 117  Q
    ||||| |||||| ||||    
T  35822881 atgttcaaataacattg 35822865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40854661 - 40854581
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||| |||||||||||||||||||    
T  40854661 attatatttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaac 40854581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47954108 - 47954028
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  47954108 attatatttttactttctttctttattgttttaatttttgtaccaacacatacttttctttataaaaatatggttgtcaac 47954028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47012576 - 47012497
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    |||||||||||| ||||| | | ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  47012576 attatatttttattttctttttttattgttttgatttttgtaccaacatatacttttctttgtaaaaatatggttgtcaa 47012497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48145589 - 48145668
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | |||||||||||| ||||||||||||||||||    
T  48145589 attatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatatggttgtcaa 48145668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 42584867 - 42584988
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| ||||||||||| ||||||| | ||  ||| ||||  |||||||| |||||| ||||||||| | |||||| ||||||| |||     
T  42584867 attatatttttactttatctctctattgctttgattctcgtgtcaatagatgattttctttgtaaaaagatggttgtccatgtggttgtcaatcacattg 42584966  T
Q  101 atgttgaaataagattgctctt 122  Q
    ||||| |||||| |||||||||    
T  42584967 atgttcaaataacattgctctt 42584988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 41430158 - 41430034
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| ||||||||||| |||| |||| ||  ||| | ||  |||||||| |||||| ||||||||| | |||||| ||||||| |||     
T  41430158 attatatttttactttatctctctattgctttggttttcgtgtcaatatatgattttctttgtaaaaagatggttgtccatgtggttgtcaatcacattg 41430059  T
Q  101 atgttgaaataagattgctctttat 125  Q
    ||||| |||||| ||||||||||||    
T  41430058 atgttcaaataacattgctctttat 41430034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26018105 - 26018182
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||||||||||  ||| |||||| ||| || | ||||||||||||||||||||||| |||||    
T  26018105 attatatttttactttctctctctattactttaatttttatacaaatacatacttttctttataaaaatatgattgtc 26018182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 34507212 - 34507101
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||  ||| | ||  |||| |||||||||| || |||||| | |||||| ||||||| |||     
T  34507212 attatatttttactttctctctctattgctttgattttcgtgtcaatacatgattttttttataaaaagatagttgtccatgtggttgtcaatcacattg 34507113  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  34507112 atgttcaaataa 34507101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4292492 - 4292560
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaat 69  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |  || |||||||| |||||||    
T  4292492 attatgtttttactttctctctctattgctttgatttttgtaccaatatttaattttctttgtaaaaat 4292560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31445382 - 31445422
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  31445382 attatatttttactttctctctctattgctttgatttttgt 31445422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 41590088 - 41590012
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||||||||||||||| | ||||||  |||||||||||| |||| | ||| ||||| ||||||||||||| |||||    
T  41590088 ttatatttttactttctttttctattactttgatttttgtgccaatacatatttttccttataaaaatatgattgtc 41590012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42598214 - 42598135
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    ||||||||| |||||| ||||||||||  || ||| ||||| |||| | ||| |||||||||||||||| ||||||||||    
T  42598214 attatatttatactttttctctctattacttagatatttgtgccaatacataattttctttataaaaatgtggttgtcaa 42598135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 41590525 - 41590415
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaa 101  Q
    ||||||||||||||||| | ||||||  |||||||||||| |||| | ||| ||||| || |||||| ||||||||| |  ||||| |||| |||||  |    
T  41590525 ttatatttttactttctttttctattactttgatttttgtgccaatacatatttttccttgtaaaaacatggttgtctatttggttgtcaagcaaataga 41590426  T
Q  102 tgttgaaataa 112  Q
    |||| ||||||    
T  41590425 tgttcaaataa 41590415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 46260098 - 46260024
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggtt 75  Q
    |||||||||||||||||||| ||||||  |||| |||| ||||||| | ||| |||||||| |||||| ||||||    
T  46260098 attatatttttactttctctttctattactttggttttcgtaccaatacatatttttctttgtaaaaacatggtt 46260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1504367 - 1504302
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaa 66  Q
    |||||||| ||||||| |||||||||||||||| |||| ||| ||| |  ||||||||||||||||    
T  1504367 attatattcttactttatctctctattgttttggttttcgtatcaatacctacttttctttataaa 1504302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18505838 - 18505879
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgta 42  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  18505838 attatgtttttagtttctctctctattgttttgatttttgta 18505879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18856534 - 18856571
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttt 38  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  18856534 attatgtttttactttctctctctattgttttgatttt 18856571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 31398195 - 31398300
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttg 106  Q
    |||||| ||||||||||||||  ||||||||| || |||| | ||| |||||||| |||||| | ||||||| |  ||||| |||| ||||| ||||||     
T  31398195 tttttattttctctctctattactttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaaacaaataaatgttc 31398294  T
Q  107 aaataa 112  Q
    ||||||    
T  31398295 aaataa 31398300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36352591 - 36352514
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||| ||||||||||| ||||||||| ||  ||| | ||  |||||||| |||||| |||||||||    
T  36352591 attatatttttactttatctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaaagatggttgtc 36352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44496809 - 44496732
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||| ||| |||||||  ||||| ||||||| ||||| |||| | ||| |||||||| ||||||||||||||||    
T  44496809 attatattattattttctcttgctattattttgatatttgtgccaatacataattttctttgtaaaaatatggttgtc 44496732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 45420060 - 45420027
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||||||||||||||||    
T  45420060 ttttactttctctctctattgttttgatttttgt 45420027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47356048 - 47356113
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaa 66  Q
    ||||||||| |||||| | || ||||||||||| |||||||| ||| | |||||||||||||||||    
T  47356048 attatatttctactttttatcactattgttttggtttttgtatcaatacatacttttctttataaa 47356113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3683596 - 3683636
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  3683596 attatatttttattttctctctctattgttttaatttttgt 3683636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27568082 - 27568122
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  27568082 attatgtttttactttctctctctattgttttggtttttgt 27568122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38861160 - 38861200
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  38861160 attatctttttactttctctctctattgttttggtttttgt 38861200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48062121 - 48062161
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  48062121 attatgtttttactttctctctctattgttttggtttttgt 48062161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9363452 - 9363519
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaa 68  Q
    |||||||||| |||||||||||| |||  ||||||||| ||| ||| | |||||||||||| ||||||    
T  9363452 attatattttgactttctctctccattactttgattttcgtatcaatacatacttttctttgtaaaaa 9363519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 32453564 - 32453599
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgta 42  Q
    |||||||||||||| |||||||||||||||||||||    
T  32453564 tttttactttctctttctattgttttgatttttgta 32453599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 1471292 - 1471218
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatactt-ttctttataaaaatatggttgtcaa 80  Q
    |||||||||| ||||||||||| ||||||||| || ||||||  ||||| |||||| ||||  ||||||||||||    
T  1471292 tttttactttatctctctattgctttgattttcgtgccaaaatctacttcttctttgtaaatttatggttgtcaa 1471218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22541032 - 22540994
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt 39  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  22541032 attatatttttactttctctctctattattttggttttt 22540994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 46578135 - 46578097
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  46578135 ttttactttctctctctattgatttgatttttgtgccaa 46578097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 46812906 - 46812872
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||| ||||||||||||||||||||||||    
T  46812906 tttttactttatctctctattgttttgatttttgt 46812872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 46829549 - 46829623
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatac-ttttctttataaaaatatggttgtcaa 80  Q
    |||||||||| ||||||||||| ||||||||| || ||||||  ||| |||||||| ||||  ||||||||||||    
T  46829549 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaa 46829623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 4225823 - 4225896
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgtaccaaaagatac-ttttctttataaaaatatggttgtcaa 80  Q
    ||||||||| |||||||||||||||| |||| ||  ||| |  ||| |||||||||||||| ||||||||||||    
T  4225823 ttttactttatctctctattgttttggttttcgtgtcaatacctactttttctttataaaactatggttgtcaa 4225896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 10700184 - 10700116
Alignment:
Q  9 tttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||| ||||||||||||  ||| |  |  |||||||||||||| ||||||||||    
T  10700184 tttactttctctctctattgctttgatttttgtgtcaaga-ctttttttctttataaaattatggttgtc 10700116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 42926208 - 42926245
Alignment:
Q  6 atttttactttctctctctattgttttgatttttgtac 43  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  42926208 atttttactttatctctctattgttttgatttctgtac 42926245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 43159581 - 43159544
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttt 38  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  43159581 attatatttttactttctctctctattgctttggtttt 43159544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22817003 - 22817035
Alignment:
Q  1 attatatttttactttctctctctattgttttg 33  Q
    ||||| |||||||||||||||||||||||||||    
T  22817003 attatttttttactttctctctctattgttttg 22817035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24532949 - 24532909
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  24532949 attatgtttttactttctctctctattgctttggtttttgt 24532909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 31844606 - 31844570
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtac 43  Q
    |||||||||| |||||||||||||||| |||||||||    
T  31844606 tttttactttatctctctattgttttggtttttgtac 31844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33775003 - 33775063
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttcttt 61  Q
    ||||| |||||||||| | |||||||||  |||||||||||||||| |  |||||||||||    
T  33775003 attatgtttttactttatttctctattgcattgatttttgtaccaatacctacttttcttt 33775063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 35072365 - 35072329
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  35072365 tatttttactttctctttctattgctttgatttttgt 35072329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 35098706 - 35098670
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  35098706 tatttttactttctctttctattgctttgatttttgt 35098670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38218358 - 38218322
Alignment:
Q  1 attatatttttactttctctctctattgttttgattt 37  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  38218358 attatatttttattttctctctatattgttttgattt 38218322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38340389 - 38340349
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||| |||||||||||||||| |||||||    
T  38340389 attatgtttttactttttctctctattgttttggtttttgt 38340349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38956625 - 38956585
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  38956625 attatctttttactttctctctctattgctttgttttttgt 38956585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40112961 - 40112921
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  40112961 attatctttttactttctctctctattgctttggtttttgt 40112921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41018728 - 41018768
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||  |||| |||||||    
T  41018728 attatatttttactttctctctctattactttggtttttgt 41018768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41989749 - 41989709
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||| ||||| |||| |||||||    
T  41989749 attatatttttactttctctctttattgctttggtttttgt 41989709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43942701 - 43942741
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  43942701 attatctttttactttctctctctattgctttggtttttgt 43942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46095015 - 46095055
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||| |||||||||||||||| ||| |||||||    
T  46095015 attatatttttattttctctctctattgtattggtttttgt 46095055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49069314 - 49069354
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||| |||||||||||||||||||| |||||||    
T  49069314 attatgtttttattttctctctctattgttttggtttttgt 49069354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35067225 - 35067344
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||| | |||||||||||| |||||||||||||||||| |||||| |||| ||||||     
T  35067225 attatatttttactttctctctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtcaaccaaattg 35067324  T
Q  101 atgttgaaataagattgctc 120  Q
    ||||| |||||| |||||||    
T  35067325 atgttcaaataacattgctc 35067344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 41639806 - 41639684
Alignment:
Q  1 attatatttttactttctctctct--attgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaat 98  Q
    ||||||||||||||||||||||||  |||| ||||||||||||  ||| | |||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  41639806 attatatttttactttctctctctctattgctttgatttttgtgtcaacacatacttttctttgtaaaaatatggttgtcaacgtggttgtcaaccaaat 41639707  T
Q  99 taatgttgaaataagattgctct 121  Q
    | ||||| |||||| ||||||||    
T  41639706 tgatgttcaaataacattgctct 41639684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6440146 - 6440264
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||| | ||| ||||||||||||  ||| | |||||||||||| ||||||||||||||||||  ||||| |||| ||| ||     
T  6440146 attatatttttactttctctctttcttgctttgatttttgtgtcaatacatacttttctttgtaaaaatatggttgtcaatttggttgtcaaccaagttg 6440245  T
Q  101 atgttgaaataagattgct 119  Q
    ||||| |||||| ||||||    
T  6440246 atgttcaaataacattgct 6440264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5574320 - 5574438
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||| |||||||| |||||||||||||   || | |||||||||||| ||||||||||| ||||||  | ||| |||| ||||||     
T  5574320 attatatttttactttctttctctattattttgatttttgtgttaatacatacttttctttgtaaaaatatgggtgtcaatatagttgtcaaccaaattg 5574419  T
Q  101 atgttgaaataagattgct 119  Q
    ||||| |||||| ||||||    
T  5574420 atgttcaaataacattgct 5574438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43715939 - 43716050
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  |||||| |||||||||| | |||||||||||  ||||||| |||||||| |  | ||| |||| ||||||     
T  43715939 attatatttttactttctctctctattactttgatatttgtaccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaattg 43716038  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  43716039 atgttcaaataa 43716050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 45405596 - 45405707
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||| ||||||||| ||  ||| | ||  |||||||| ||||||||| |||||| | |||||| ||||||| |||     
T  45405596 attatatttttactttctctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaaatatagttgtccatgtggttgtcaatcacattg 45405695  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  45405696 atgttcaaataa 45405707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 6972226 - 6972299
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    ||||| ||||||||||||||| |||| ||||||| |||| | |||||||||||| |||||||||||||||||||    
T  6972226 ttttattttctctctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgtcaac 6972299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25830252 - 25830175
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | |||||||||||| ||||||| ||||||||    
T  25830252 attatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtc 25830175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12655987 - 12656098
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  ||| |||||||| ||||   |||||||||||| |||||| ||||||||| |  ||||| |||| |||||      
T  12655987 attatatttttactttctctctctattactttcatttttgtgccaatgcatacttttctttgtaaaaacatggttgtctatttggttgtcaagcaaatag 12656086  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  12656087 atgttcaaataa 12656098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 13970998 - 13971061
Alignment:
Q  18 tctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    ||||||||||| |||||||||||| |||| | || |||||||||||||||||||||||||||||    
T  13970998 tctctctattgctttgatttttgtgccaacacatgcttttctttataaaaatatggttgtcaac 13971061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 42619971 - 42619908
Alignment:
Q  17 ctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    |||||||||||| |||||||||||| |||| | |||||||||||| ||||||||||||||||||    
T  42619971 ctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 42619908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38675668 - 38675745
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||||||||||  |||| ||||||| |||| | |||||||||||| ||||  ||||||||||    
T  38675668 attatatttttactttctctctctatttctttggtttttgtgccaatacatacttttctttttaaagttatggttgtc 38675745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 39453270 - 39453201
Alignment:
Q  54 ttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaaataagattgctcttt 123  Q
    |||||||| |||||||||| ||||||| |||||| ||||||||||| ||||| |||||| ||||||||||    
T  39453270 ttttctttgtaaaaatatgattgtcaatgtggttgtcaatcaaattgatgttcaaataacattgctcttt 39453201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3413199 - 3413083
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||| | ||||||| |||| ||||||| |||| | ||  |||||||| ||||||||||  |||||| || ||| |||| ||||||     
T  3413199 attatatttttactttctttttctattgctttggtttttgtgccaatacatgattttctttgtaaaaatatgactgtcaatgttgttgtcaaccaaattg 3413100  T
Q  101 atgttgaaataagattg 117  Q
    ||||| |||||| ||||    
T  3413099 atgttcaaataacattg 3413083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 67167 - 67056
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||  ||||||||||  |||||| ||||| |||| | ||  |||||||| ||||||| |||||||| |  ||||| |||| |||||||    
T  67167 attatatttttacttcttctctctattactttgatatttgtgccaatacatgattttctttgtaaaaatgtggttgtctatttggttgtcaagcaaatta 67068  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  67067 atgttcaaataa 67056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 33539470 - 33539581
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||||||| |||||||||||  |||||| ||||| |||| | ||||||||||||  |||||| |||||||| |  | ||| |||| ||||||     
T  33539470 attatatttttacttactctctctattactttgatatttgtgccaatacatacttttctttgaaaaaatgtggttgtccatttagttgtcaagcaaattg 33539569  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  33539570 atgttcaaataa 33539581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43285969 - 43285890
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    |||||||||||||||||||||| ||||| |||| ||||| || ||| | ||| |||||||| ||||||||| ||||||||    
T  43285969 attatatttttactttctctctttattgctttggtttttatatcaatacatatttttctttctaaaaatatagttgtcaa 43285890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 36612084 - 36612008
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||| |||||||||||| | ||||  |||||||||||| |||| | |||||||| |||| |||||||||||||||    
T  36612084 ttatatatttactttctctttttattactttgatttttgtgccaacacatacttttatttaaaaaaatatggttgtc 36612008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10902769 - 10902835
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaa 67  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||| | ||  |||||||| |||||    
T  10902769 attatgtttttactttctctctctattgctttgatttttgtgccaatacatcattttctttgtaaaa 10902835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24798364 - 24798326
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  24798364 attatatttttactttctctttctattgttttgattttt 24798326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2621850 - 2621887
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttt 38  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  2621850 attatatttttactttctcactctattgttttgatttt 2621887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3270885 - 3270767
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||  |||||||||||  || |||||||||||| ||||   |||||||| ||||||||| ||||||||||||  | ||| |||| ||| ||     
T  3270885 attatatttttgttttctctctct--tgctttgatttttgtgccaatccatacttttgtttataaaattatggttgtcaatttagttgtcaaccaagttg 3270788  T
Q  101 atgttgaaataagattgctct 121  Q
    ||||| |||||| ||| ||||    
T  3270787 atgttcaaataacattactct 3270767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8671562 - 8671485
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||| | ||  |||| ||| ||||||||||| ||||    
T  8671562 attatatttttactttatctctctattactttgatttttgtatcaatatatttttttttttgtaaaaatatggctgtc 8671485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33279555 - 33279510
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    |||||||||||||||||||||||||||||| || ||||||| ||||    
T  33279555 attatatttttactttctctctctattgttctggtttttgtgccaa 33279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5740792 - 5740752
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  5740792 attatgtttttactttctctctctattgttttggtttttgt 5740752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10692503 - 10692543
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  10692503 attatctttttactttctctctctattgttttggtttttgt 10692543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10731610 - 10731650
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  10731610 attatctttttactttctctctctattgctttgatttttgt 10731650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31249531 - 31249487
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtacca 45  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  31249531 attatctttttactttctctctctattgctttggtttttgtacca 31249487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37942913 - 37942882
Alignment:
Q  1 attatatttttactttctctctctattgtttt 32  Q
    ||||||||||||||||||||||||||||||||    
T  37942913 attatatttttactttctctctctattgtttt 37942882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42786666 - 42786548
Alignment:
Q  1 attatatttttacttt--ctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaat 98  Q
    ||||||||||||||||  |||||||| ||  |||||||||||| |||| | ||| |||||||| |||||  ||| |||||||  ||||| |||| ||| |    
T  42786666 attatatttttactttttctctctctctttctttgatttttgtgccaatacatatttttctttgtaaaatcatgattgtcaatttggttgtcaaccaagt 42786567  T
Q  99 taatgttgaaataagattg 117  Q
    | ||||| |||||| ||||    
T  42786566 tgatgttcaaataacattg 42786548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 6445247 - 6445281
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||| ||||||||||||||||||||||||    
T  6445247 tttttactttatctctctattgttttgatttttgt 6445281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 35792114 - 35792180
Alignment:
Q  12 actttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||||||||||||||  |||||| ||||| |||| | |||||||| || |||||||| ||||||||    
T  35792114 actttctctctctattactttgatatttgtgccaatacatactttttttgataaaaatgtggttgtc 35792180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37133869 - 37133791
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||| |||||||||||||| ||||||| ||||||||||||  ||| | ||  |||||||| ||||| | |||||||||    
T  37133869 attatgtttttactttctctttctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtca 37133791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 38585470 - 38585536
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatat 71  Q
    |||||||||||||||| || |||||||||||| ||||  ||| | ||| ||||||||||||| ||||    
T  38585470 tatttttactttctctttcaattgttttgattcttgtgtcaatacatatttttctttataaatatat 38585536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 45405980 - 45405950
Alignment:
Q  11 tactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||||||    
T  45405980 tactttctctctctattgttttgatttttgt 45405950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2020610 - 2020651
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgta 42  Q
    |||||||||||||||| ||||| |||| ||||||||||||||    
T  2020610 attatatttttactttatctctttattattttgatttttgta 2020651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 33100460 - 33100367
Alignment:
Q  18 tctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaaata 111  Q
    ||||||||||  ||||||||||||  ||| | |||||||||||| |||||||| ||||||| |  ||||| |||| |||||  ||||| |||||    
T  33100460 tctctctattactttgatttttgtgtcaatacatacttttctttgtaaaaataaggttgtctatttggttgtcaaacaaatggatgttcaaata 33100367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44415754 - 44415822
Alignment:
Q  1 attatatttttactt--tctctctctattgttttgatttttgtaccaaaagatacttttctttataaaa 67  Q
    |||||||||||||||  |||||||||||||||||| ||| |||||||| |  || ||||||| ||||||    
T  44415754 attatatttttactttctctctctctattgttttggtttctgtaccaatatttaattttcttcataaaa 44415822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7777186 - 7777146
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||  |||||| |||||    
T  7777186 attatatttttactttctctctctattactttgatatttgt 7777146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10592287 - 10592247
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  10592287 attatgtttttactttctctctctattgctttggtttttgt 10592247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11134661 - 11134701
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||| ||||||||||||||||| |||||||||||||    
T  11134661 attatttttctactttctctctctattattttgatttttgt 11134701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22719504 - 22719544
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  22719504 attatctttttactttctctctctattgctttggtttttgt 22719544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 22811519 - 22811487
Alignment:
Q  5 tatttttactttctctctctattgttttgattt 37  Q
    |||||||||||||||||| ||||||||||||||    
T  22811519 tatttttactttctctctttattgttttgattt 22811487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23754713 - 23754673
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||| |||| ||||||||||| |||||||    
T  23754713 attatatttttactttatctcactattgttttggtttttgt 23754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 34718185 - 34718221
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtac 43  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  34718185 tttttactttatctctctattgctttgatttttgtac 34718221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36816623 - 36816583
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  36816623 attatctttttactttttctctctattgctttgatttttgt 36816583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37754626 - 37754658
Alignment:
Q  1 attatatttttactttctctctctattgttttg 33  Q
    ||||| |||||||||||||||||||||||||||    
T  37754626 attatgtttttactttctctctctattgttttg 37754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 36756057 - 36755935
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||| | |||||||||||| |||||||||||||||||| ||| || |||||||||||     
T  36756057 attatatttttattttctctctctattgctttgatttttgtgccaacatatacttttctttgtaaaaatatggttgtcaatgtgattgtcaatcaaattg 36755958  T
Q  101 atgttgaaataagattgctcttt 123  Q
    || || |||||| ||||||||||    
T  36755957 atattcaaataacattgctcttt 36755935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1436881 - 1437001
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||| | |||||||||||| |||||||||||||||||| |||||| | || ||||||     
T  1436881 attatatttttactttctctctctattgttttattttttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtaaaccaaattg 1436980  T
Q  101 atgttgaaataagattgctct 121  Q
    ||||| |||||| ||||||||    
T  1436981 atgttcaaataacattgctct 1437001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48353061 - 48353141
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||||||    
T  48353061 attatatttttactttctctctctattgctttgatttttgtaccaacacatacttttctttataaaaatatgattgtcaac 48353141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 51698924 - 51699043
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaa 101  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||| | |||||||||||| ||| |||||||||||||| |||||| |||| |||||| |    
T  51698924 ttatatttttattttctctctctattgatttggtttttgtgccaacacatacttttctttgtaagaatatggttgtcaatgtggttgtcaaccaaattga 51699023  T
Q  102 tgttgaaataagattgctct 121  Q
    |||| |||||| ||||||||    
T  51699024 tgttcaaataacattgctct 51699043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 52714798 - 52714878
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||||| |||||||||||||||||||    
T  52714798 attatatttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaac 52714878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 19150319 - 19150246
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    ||||||||||||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||||    
T  19150319 ttttactttctctctctattgttttgatttttgtgtcaacaaatacttttctttataaaaatatggttgtcaac 19150246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 33796331 - 33796451
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| |||| |||||  |||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| || |||| ||||||     
T  33796331 attatatttttactttttctccctattactttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaatgtgattgtcaaccaaattg 33796430  T
Q  101 atgttgaaataagattgctct 121  Q
    || || |||||| ||| ||||    
T  33796431 attttcaaataacattactct 33796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 54099363 - 54099243
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||| |||||||||| | |||| | |||||||||||| |||||||||| ||||||| ||  || |||| ||||||     
T  54099363 attatatttttactttctctctctattgctttgatttttatgccaacatatacttttctttgtaaaaatatgattgtcaatgtaattgtcaaccaaattg 54099264  T
Q  101 atgttgaaataagattgctct 121  Q
    ||||| |||||| ||| ||||    
T  54099263 atgttcaaataacattactct 54099243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29780962 - 29781082
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| | ||||||||||||||||||| || |||| | | ||||||||||||||||||||| ||||| |  || || |||||||||||     
T  29780962 attatatttttactttttttctctattgttttgattttcgtgccaatacaaacttttctttataaaaatatgattgtccatatgattgtcaatcaaattg 29781061  T
Q  101 atgttgaaataagattgctct 121  Q
    ||||  |||||| ||| ||||    
T  29781062 atgtccaaataacattactct 29781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 49021776 - 49021856
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||| ||| |||||| |||| |||||||||||| |||| | |||||||||||| |||||||||||||||||||    
T  49021776 attatatttttattttgtctctcaattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaac 49021856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 52485537 - 52485614
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||| ||||||||||| |||| |||| || |||| | |||||||||||| ||||||||||||||||    
T  52485537 attatatttttactttatctctctattgctttggttttcgtgccaatacatacttttctttgtaaaaatatggttgtc 52485614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 43720463 - 43720561
Alignment:
Q  20 tctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaaataagattgct 119  Q
    ||||||||| |||  ||||||| |||| | ||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||| ||| || ||||||    
T  43720463 tctctattgctttattttttgtgccaaca-atacttttctttataaaaatatgattgtcaatgtggttgtcaaccaaattaatgttcaaagaacattgct 43720561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 49761193 - 49761082
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||| ||||||  |||||| ||||| |||| | ||| |||||||| ||||||| |||||||| |  | ||| |||| ||||||     
T  49761193 attatatttttactttctctttctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaagcaaattg 49761094  T
Q  101 atgttgaaataa 112  Q
    ||||||||||||    
T  49761093 atgttgaaataa 49761082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45657776 - 45657697
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    |||||||||||||||| ||||||||||  |||||| ||||| |||| | ||||||||||||||| |||| || |||||||    
T  45657776 attatatttttactttttctctctattactttgatatttgtgccaatacatacttttctttatataaatgtgattgtcaa 45657697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50559218 - 50559141
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |  |  |||||||||||||  |||||||||||    
T  50559218 attatgtttttactttctctctctattgttttgatttttataccaatacct-tttttctttataaatttatggttgtca 50559141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39338734 - 39338694
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  39338734 attatatttttactttttctctctattgttttgatttttgt 39338694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 45186558 - 45186454
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  |||||||||  |  ||| | ||||||||| || ||||| |||||||||| |  ||||| |||| ||||||     
T  45186558 attatatttttactttctctctctattactttgattttcttgtcaatacatacttttcgttgtaaaagtatggttgtccatttggttgtcaaacaaattg 45186459  T
Q  101 atgtt 105  Q
    |||||    
T  45186458 atgtt 45186454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48944717 - 48944641
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgt 77  Q
    |||| ||||||||||||||||||||||  |||||| ||||| |||| | ||| |||||||| |||||||||| ||||    
T  48944717 attacatttttactttctctctctattactttgatatttgtgccaatacatatttttctttgtaaaaatatgattgt 48944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35377088 - 35377010
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||| |||||||||||| ||||||||| |||||||||||| |||| | ||  |||||||| ||||| | |||||||||    
T  35377088 attatgtttttactttctttctctattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtca 35377010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39629845 - 39629807
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  39629845 attatgtttttactttctctctctattgttttgattttt 39629807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9311105 - 9311182
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||| ||||||||||||||| ||||||||||| |||| ||  ||| |  ||||||||||| |||| |||||||||||    
T  9311105 attatgtttttactttctctccctattgttttggttttcgtgtcaatacctacttttctttttaaatatatggttgtc 9311182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 37894242 - 37894137
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttg 106  Q
    |||||||||||||||||||||  |||||| |||||  ||| | |||||||||||  ||||||| |||||||| |  | ||| |||| |||||| |||||     
T  37894242 tttttactttctctctctattactttgatatttgtgtcaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttc 37894143  T
Q  107 aaataa 112  Q
    ||||||    
T  37894142 aaataa 37894137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 41443190 - 41443157
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||||||||||||||||    
T  41443190 ttttactttctctctctattgttttgatttttgt 41443157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5114142 - 5114182
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  5114142 attatctttttactttctctctctattgctttgatttttgt 5114182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6178432 - 6178392
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  6178432 attatgtttttactttctctctctattgctttgatttttgt 6178392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26014876 - 26014916
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  26014876 attatctttttactttctctctctattgttttggtttttgt 26014916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26452729 - 26452693
Alignment:
Q  1 attatatttttactttctctctctattgttttgattt 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  26452729 attatatttttactttctctctctattgctttgattt 26452693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28539747 - 28539687
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttcttt 61  Q
    ||||| |||||||||||||||||||||| ||||| |||||| |||||| ||  ||||||||    
T  28539747 attatgtttttactttctctctctattgctttgacttttgtgccaaaacatcattttcttt 28539687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35597226 - 35597266
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  35597226 attatttttttactttctctctctattgttttggtttttgt 35597266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 47742349 - 47742458
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||| ||||||  ||||||| ||| |||||||| |||| | |||||| ||||  ||||||||| ||||| || |||||| |||| ||||||     
T  47742349 attatatttttaatttctc--tctattgctttaatttttgttccaacacatacttctcttcgtaaaaatatagttgttaatgtggttgtcaaccaaattg 47742446  T
Q  101 atgttgaaataa 112  Q
     |||| ||||||    
T  47742447 ctgttcaaataa 47742458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52326083 - 52326123
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  52326083 attatctttttactttctctctctattgttttggtttttgt 52326123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 20547996 - 20547957
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgt 41  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  20547996 ttatctttttactttctctctctattgctttgatttttgt 20547957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16969573 - 16969535
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  16969573 attatctttttactttctctttctattgttttgattttt 16969535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 29573357 - 29573283
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatactttt-ctttataaaaatatggttgtcaa 80  Q
    |||||||||| ||||||||||| ||||||||| || ||||||  ||||||| |||| ||||  ||||||||||||    
T  29573357 tttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttgtcaa 29573283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 41
Target Start/End: Original strand, 31104739 - 31104769
Alignment:
Q  11 tactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||||||    
T  31104739 tactttctctctctattgttttgatttttgt 31104769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 32145982 - 32145952
Alignment:
Q  11 tactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||||||    
T  32145982 tactttctctctctattgttttgatttttgt 32145952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 41309187 - 41309221
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||| ||||||||||||    
T  41309187 tttttactttctctctctattgctttgatttttgt 41309221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 9692797 - 9692830
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||| ||||||||||||    
T  9692797 ttttactttctctctctattgctttgatttttgt 9692830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 16479703 - 16479808
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttg 106  Q
    |||||| ||||||||||||||  ||||||||| || |||| | ||| |||||||| |||||| | ||||||| |  ||||| |||| |||||  |||||     
T  16479703 tttttattttctctctctattactttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaagcaaatagatgttc 16479802  T
Q  107 aaataa 112  Q
    ||||||    
T  16479803 aaataa 16479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28700525 - 28700570
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||||||||||||||||||| |||| ||||||| ||||    
T  28700525 attatgtttttactttctctctctattgctttggtttttgtgccaa 28700570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 29917011 - 29916954
Alignment:
Q  24 tattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    ||||| ||||||||||||  ||| | ||||||| |||| |||||||||||||||||||    
T  29917011 tattgctttgatttttgtgtcaacacatactttcctttgtaaaaatatggttgtcaac 29916954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 29966164 - 29966107
Alignment:
Q  24 tattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    ||||| ||||||||||||  ||| | ||||||| |||| |||||||||||||||||||    
T  29966164 tattgctttgatttttgtgtcaacacatactttcctttgtaaaaatatggttgtcaac 29966107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34456855 - 34456900
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||||||||||||||||||| ||| |||||||| ||||    
T  34456855 attatctttttactttctctctctattgctttaatttttgtgccaa 34456900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34627888 - 34627847
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgta 42  Q
    |||||||||||||||||||||| || || |||||||||||||    
T  34627888 attatatttttactttctctctttactgctttgatttttgta 34627847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 52100325 - 52100402
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||| ||||||  |||||| ||| | | || | ||| |||||||| |||||||||| |||||    
T  52100325 attatatttttactttctctttctattactttgatatttatgctaatacatatttttctttgtaaaaatatgattgtc 52100402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 288790 - 288830
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  288790 attatttttttactttctctctctattgctttggtttttgt 288830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5244293 - 5244333
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  5244293 attatttttttactttctctctctattgctttggtttttgt 5244333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19149054 - 19149094
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  19149054 attatctttttactttctctctttattgttttggtttttgt 19149094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 24256769 - 24256737
Alignment:
Q  10 ttactttctctctctattgttttgatttttgta 42  Q
    ||||||||||||| |||||||||||||||||||    
T  24256769 ttactttctctctttattgttttgatttttgta 24256737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 26672466 - 26672498
Alignment:
Q  5 tatttttactttctctctctattgttttgattt 37  Q
    |||||||||||| ||||||||||||||||||||    
T  26672466 tatttttactttatctctctattgttttgattt 26672498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27541509 - 27541469
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  27541509 attatctttttactttctctctctattgctttggtttttgt 27541469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33791777 - 33791737
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  33791777 attatgtttttactttccctctctattgttttgacttttgt 33791737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38926692 - 38926732
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  38926692 attatctttttactttctctctctattgctttggtttttgt 38926732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41505555 - 41505595
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  41505555 attatctttttactttctctctctattgctttggtttttgt 41505595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42358645 - 42358605
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  42358645 attatctttttactttatctctctattgctttgatttttgt 42358605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45000127 - 45000167
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  45000127 attatctttttactttctctctctattgatttggtttttgt 45000167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45205341 - 45205373
Alignment:
Q  1 attatatttttactttctctctctattgttttg 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45205341 attatatttttaatttctctctctattgttttg 45205373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45711446 - 45711414
Alignment:
Q  1 attatatttttactttctctctctattgttttg 33  Q
    ||||| |||||||||||||||||||||||||||    
T  45711446 attatctttttactttctctctctattgttttg 45711414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46623971 - 46624011
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||| |||||||||||| |||||||    
T  46623971 attatctttttactttctctttctattgttttggtttttgt 46624011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50314689 - 50314729
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||  ||||||||||||    
T  50314689 attatgtttttactttctctctctattactttgatttttgt 50314729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 55361240 - 55361200
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  55361240 attatttttttactttctctctctattgctttggtttttgt 55361200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 49570061 - 49570162
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| || |||| |||| ||    
T  49570061 attatatttttactttctctctctattgttttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaatgtgattgtcaaccaaaata 49570160  T
Q  101 at 102  Q
    ||    
T  49570161 at 49570162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 29359809 - 29359928
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaa 101  Q
    ||||||||||||||| ||||||||||| |||  |||||||  ||| | ||||||||||||||||||||||||||||||| |||||| ||||||||||| |    
T  29359809 ttatatttttactttttctctctattgcttttgtttttgtgtcaacacatacttttctttataaaaatatggttgtcaatgtggttgtcaatcaaattga 29359908  T
Q  102 tgttgaaataagattgctct 121  Q
    |||| |||||| ||||||||    
T  29359909 tgttcaaataacattgctct 29359928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34818051 - 34817931
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||| | ||| |||||||| ||||||||||||||||||  || || ||||  |||||     
T  34818051 attatatttttactttctctttctattgctttgatttttgtgccaacacatatttttctttgtaaaaatatggttgtcaatatgattgtcaactaaattg 34817952  T
Q  101 atgttgaaataagattgctct 121  Q
    ||||| |||||| ||||||||    
T  34817951 atgttcaaataacattgctct 34817931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30745051 - 30745170
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||| ||||||||| |||||||||||||||| |||||||  ||| | ||| |||||||| ||| | |||||||||| |  ||||| ||||||||||||    
T  30745051 attataattttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagtatggttgtctatatggttgtcaatcaaatta 30745150  T
Q  101 atgttgaaataagattgctc 120  Q
    ||||| |||||| |||||||    
T  30745151 atgttcaaataacattgctc 30745170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30766502 - 30766621
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||| ||||||||| |||||||||||||||| |||||||  ||| | ||| |||||||| ||| | |||||||||| |  ||||| ||||||||||||    
T  30766502 attataattttactttatctctctattgttttggtttttgtgtcaatacataattttctttgtaagagtatggttgtctatatggttgtcaatcaaatta 30766601  T
Q  101 atgttgaaataagattgctc 120  Q
    ||||| |||||| |||||||    
T  30766602 atgttcaaataacattgctc 30766621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 49020410 - 49020295
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||| ||||||||||  ||||||||| ||||||| |||| | ||| |||||||| ||||||||||||||||||  ||||| |||| ||||||     
T  49020410 attatattttttctttctctct--attgttttggtttttgtgccaatatatatttttctttgtaaaaatatggttgtcaatttggttgtcaaccaaattg 49020313  T
Q  101 atgttgaaataagattgc 118  Q
    ||||| |||||| |||||    
T  49020312 atgttcaaataaaattgc 49020295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 23665731 - 23665652
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||||||||||||| |||| |||| |||||||  ||| | |||||||||||| |||||||||||||||||||    
T  23665731 ttatatttttactttctctctcaattgctttggtttttgtgtcaacacatacttttctttgtaaaaatatggttgtcaac 23665652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 29877370 - 29877483
Alignment:
Q  9 tttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaa 108  Q
    ||||||||||||||||||||||||| |||| ||  ||| | ||| |||||||| |||||||||||||||| |  || || ||||| ||||| ||||| ||    
T  29877370 tttactttctctctctattgttttggttttcgtgtcaatacataattttctttgtaaaaatatggttgtccatatgattgtcaataaaattgatgttcaa 29877469  T
Q  109 ataagattgctctt 122  Q
    |||| ||| |||||    
T  29877470 ataacatttctctt 29877483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 52437559 - 52437679
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||| ||| | ||| |||| ||| |||||| ||||||||| | ||| || ||||||| |||     
T  52437559 attatatttttactttatctttctattgctttgattttcgtatcaatacataattttatttgtaaaaagatggttgtccatgtgattgtcaatcacattg 52437658  T
Q  101 atgttgaaataagattgctct 121  Q
    || || |||||| ||||||||    
T  52437659 atatttaaataacattgctct 52437679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12999829 - 12999718
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||| ||||||  |||||| ||||| |||| | ||| |||||||| ||||||| |||||||| |  | ||| |||| ||||||     
T  12999829 attatatttttactttctctttctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaagcaaattg 12999730  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  12999729 atgttcaaataa 12999718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 49931618 - 49931729
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||| |||||||| |  |||||| ||||| |||| | ||||||||||||  |||||| |||||||| |  | |||||||| ||||||     
T  49931618 attatatttttactttatctctctaatactttgatatttgtgccaatacatacttttctttggaaaaatgtggttgtccatttagttatcaagcaaattg 49931717  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  49931718 atgttcaaataa 49931729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9988016 - 9988061
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  9988016 attatatttttactttctctctctattgctttgatttttgtgccaa 9988061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36750489 - 36750411
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaac 81  Q
    ||||||||||||| |||| |||  |||| |||| ||||||| |||| | |||||||||||| |||||||||||||||||||    
T  36750489 attatatttttaccttctatct--attgctttgttttttgtgccaacacatacttttctttgtaaaaatatggttgtcaac 36750411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 44723426 - 44723503
Alignment:
Q  2 ttatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||||||||||||| | ||| |||||||||| |||| ||||||| | |||| ||||||| |||||||||| ||||||    
T  44723426 ttatatttttactttatttctttattgttttggttttcgtaccaatacatacatttctttgtaaaaatatgattgtca 44723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50242375 - 50242452
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||| ||||||||||||||||||||  |||| |||| || |||| | |||||||||||| |||| |||||||||||    
T  50242375 attataattttactttctctctctattactttggttttcgtgccaatacatacttttctttgtaaatatatggttgtc 50242452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 33076184 - 33076304
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||| ||||||||||||||  |||||| ||||| |||| | ||| |||||||| ||||| | |||||||| |  |  ||||||| ||||||     
T  33076184 attatatttttattttctctctctattactttgatatttgtgccaatacataattttctttgtaaaattgtggttgtccatttaattatcaagcaaattg 33076283  T
Q  101 atgttgaaataagattgctct 121  Q
    ||||| |||||| | ||||||    
T  33076284 atgttcaaataacactgctct 33076304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33100872 - 33100912
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  33100872 attatctttttactttctctctctattgttttgatttttgt 33100912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 49559203 - 49559131
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgt 77  Q
    |||||||| ||| ||||||||||| ||| |||||| |||||| | |||||||||||| |||||||||| ||||    
T  49559203 tatttttattttatctctctattgctttaatttttataccaacacatacttttctttgtaaaaatatgattgt 49559131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50726255 - 50726215
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  50726255 attatctttttactttctctctctattgttttgatttttgt 50726215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 52261418 - 52261469
Alignment:
Q  15 ttctctctctattgttttgatttttgtaccaaaagatacttttctttataaa 66  Q
    |||||||||||||||||||||||||||| |||||  ||| ||||||||||||    
T  52261418 ttctctctctattgttttgatttttgtatcaaaacttacatttctttataaa 52261469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18434859 - 18434937
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||| | ||  ||||||||  |||| | |||||||||    
T  18434859 attatgtttttactttctctctttattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtca 18434937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8454686 - 8454609
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||| ||||||||| |||||||||  |||| ||   |  | |||||||||||||||||||||||||||||    
T  8454686 attatatttttattttctctctttattgttttagttttcgtgtgagtatatacttttctttataaaaatatggttgtc 8454609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10627817 - 10627776
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgta 42  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  10627817 attatattttcactttatctctctattgttttgatttttgta 10627776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11597701 - 11597778
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||| ||||||||||||||||||||||||||| |||| || | || |  ||||||||||| ||||  ||||||||||    
T  11597701 attatgtttttactttctctctctattgttttggttttcgtgctaatatctacttttctttgtaaatctatggttgtc 11597778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23645475 - 23645515
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  23645475 attatctttttactttctctctctattgttttggtttttgt 23645515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44519158 - 44519118
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  44519158 attatctttttactttctctctctattgctttgatttttgt 44519118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51080097 - 51080057
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  51080097 attatatttttactttctctctctattgctttggtttttgt 51080057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30973617 - 30973728
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||| ||| ||||||||||  |||||| |||||  ||| | |||||||||||| ||||||| || ||||| |  | ||| |||| ||||||     
T  30973617 attatatttttattttttctctctattactttgatatttgtgtcaatacatacttttctttgtaaaaatgtgattgtccatttagttgtcaagcaaattg 30973716  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  30973717 atgttcaaataa 30973728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 740962 - 740881
Alignment:
Q  1 attatatttttactttctct--ctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaa 80  Q
    ||||||||||||||||||||  ||||||| ||||| |||||||   || | ||| |||||||| ||||| ||||||||||||    
T  740962 attatatttttactttctctctctctattattttggtttttgtgttaatacataattttctttgtaaaattatggttgtcaa 740881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1689456 - 1689531
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||||| |||||||||| |||  |||  ||||||||||||  ||| | |||||||| ||||||||||||||||||||    
T  1689456 attatatatttactttctttct--attactttgatttttgtgtcaacacatacttttatttataaaaatatggttgtc 1689531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 19055760 - 19055726
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  19055760 tttttactttctctctctattgttttggtttttgt 19055726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27533491 - 27533453
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt 39  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  27533491 attatgtttttactttctctctttattgttttgattttt 27533453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 35369770 - 35369804
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||| ||||||||||||    
T  35369770 tttttactttctctctctattgctttgatttttgt 35369804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 49446804 - 49446689
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatac----ttttctttataaaaatatggttgtcaacgtggttatcaatcaa 96  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | ||||    |||||||| ||||||| || ||||| |  | ||| |||| |||    
T  49446804 attatatttttactttctctctctattactttgatatttgtgccaatacatacatatttttctttgtaaaaatgtgattgtccatttagttgtcaagcaa 49446705  T
Q  97 attaatgttgaaataa 112  Q
    ||| ||||| ||||||    
T  49446704 attgatgttcaaataa 49446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50775163 - 50775085
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||| |||||||||| ||||||||||| |||| |||||||  ||| | ||  |||||||| ||||| |||||||||||    
T  50775163 attatgtttttactttatctctctattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgtca 50775085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11947860 - 11947937
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||||| |||||||||||| ||||||  ||| |||||||| | || | || ||||| ||| ||||||||||||||||    
T  11947860 attatatatttactttctctttctattactttaatttttgtgcaaacacatgcttttatttgtaaaaatatggttgtc 11947937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43775270 - 43775311
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgta 42  Q
    ||||| ||||||||||||||||||||||||||  ||||||||    
T  43775270 attatctttttactttctctctctattgttttagtttttgta 43775311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 48261204 - 48261249
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||||||||||||||||||| |||| ||||||| ||||    
T  48261204 attatgtttttactttctctctctattgctttggtttttgtgccaa 48261249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49065371 - 49065326
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||||||||||||||||||| |||| ||||||| ||||    
T  49065371 attatgtttttactttctctctctattgctttggtttttgtgccaa 49065326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 49647150 - 49647117
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||||||||||| |||||||    
T  49647150 ttttactttctctctctattgttttggtttttgt 49647117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 51466835 - 51466911
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgtaccaaaagatac-ttttctttataaaaatatggttgtcaac 81  Q
    |||||||||||| ||||||||||||||||||||  |||| || |  ||| |||||||||| ||| |||||||||||||    
T  51466835 tatttttactttatctctctattgttttgatttccgtacaaatacctactttttctttat-aaattatggttgtcaac 51466911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 649833 - 649873
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  649833 attatctttttactttctctctctattgctttggtttttgt 649873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14983837 - 14983877
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||  |||||||    
T  14983837 attatgtttttactttctctctctattgttttagtttttgt 14983877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31088245 - 31088285
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  31088245 attatctttttactttctctctctattgctttggtttttgt 31088285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39849160 - 39849120
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||| |||| ||||||||||| |||||||    
T  39849160 attatatttttactttttctcactattgttttgttttttgt 39849120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41677331 - 41677291
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||| ||| |||||||||||||||| |||||||    
T  41677331 attatatttttattttatctctctattgttttggtttttgt 41677291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51718633 - 51718593
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||| ||||||||||||| |||||||||||||    
T  51718633 attatctttttaccttctctctctattattttgatttttgt 51718593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52576309 - 52576269
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  52576309 attatttttttactttctctctctattgctttggtttttgt 52576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16019541 - 16019663
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||   ||| |||||||||||||||||||||||||||  || || |||||||||||     
T  16019541 attatatttttactttctctctctattgctttgatttttgtgtcaacgcatatttttctttataaaaatatggttgtcaatatgcttgtcaatcaaattg 16019640  T
Q  101 atgttgaaataagattgctcttt 123  Q
    ||||| |||||| ||||||||||    
T  16019641 atgttcaaataacattgctcttt 16019663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34757915 - 34757793
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||| | ||  |||||||| |||||||||| ||||||  ||| || |||||||||||     
T  34757915 attatatttttactttctctttctattgatttgatttttgtgccaacacatgtttttctttgtaaaaatatgattgtcagtgtgattgtcaatcaaattg 34757816  T
Q  101 atgttgaaataagattgctcttt 123  Q
    || || |||||| ||||||||||    
T  34757815 atatttaaataacattgctcttt 34757793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34759189 - 34759067
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||| | ||  |||||||| |||||||||| ||||||  ||| || |||||||||||     
T  34759189 attatatttttactttctctttctattgatttgatttttgtgccaacacatgtttttctttgtaaaaatatgattgtcagtgtgattgtcaatcaaattg 34759090  T
Q  101 atgttgaaataagattgctcttt 123  Q
    || || |||||| ||||||||||    
T  34759089 atatttaaataacattgctcttt 34759067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 47015087 - 47015189
Alignment:
Q  18 tctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaaataagattg 117  Q
    ||||||||||| |||| ||||||| |||| |||||||||||||| |||||||||| ||||||| |||||| |||| |||| | ||||| |||||| ||||    
T  47015087 tctctctattgctttggtttttgtgccaatagatacttttctttgtaaaaatatgattgtcaatgtggttgtcaaccaaactgatgttcaaataacattg 47015186  T
Q  118 ctc 120  Q
    |||    
T  47015187 ctc 47015189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 31574946 - 31574825
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||| | ||  |||||||| |||||| ||||||||| | |||||| ||||||          
T  31574946 attatatttttattttctctctctattgctttgatttttgtatcaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaatc------ 31574853  T
Q  101 atgttgaaataagattgctctttattta 128  Q
    ||||| |||||| |||||||||||||||    
T  31574852 atgttcaaataacattgctctttattta 31574825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 46665201 - 46665097
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||| ||||||||||| ||| |||||||||| | |||| | |||||||||||| |||| |||||||||||||  ||||| |||||||| ||     
T  46665201 attatatttttattttctctctcttttgctttgatttttatgccaatacatacttttctttgtaaatatatggttgtcaatttggttgtcaatcaagttg 46665102  T
Q  101 atgtt 105  Q
    |||||    
T  46665101 atgtt 46665097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 49585059 - 49585170
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | |||||||||||  ||||||| |||||||| |  | ||| |||| |||||||    
T  49585059 attatatttttactttctctctctattactttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaatta 49585158  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  49585159 atgttcaaataa 49585170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38792896 - 38792817
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttat-aaaaatatggttgtcaac 81  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||| | |||||||||||| | ||||||||| ||||||||    
T  38792896 attatatttttactttctctct--attgctttgatttttgtaccaacacatacttttctttgtaaaaaatatgattgtcaac 38792817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 44257736 - 44257626
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    ||||||||||||||||||||||||||| ||||||| |||||   || | |||||||||||||||||||| || ||||| |  | ||| |||| ||||||     
T  44257736 attatatttttactttctctctctattattttgatatttgtgttaatacatacttttctttataaaaatgtgattgtccatttagttgtcaaacaaattg 44257637  T
Q  101 atgttgaaata 111  Q
    ||||| |||||    
T  44257636 atgttcaaata 44257626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1795988 - 1795911
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||| ||||||||||  |||||| ||||| |||| | |||||||||||  ||||||| ||||||||    
T  1795988 attatatttttactttatctctctattactttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtc 1795911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7632468 - 7632423
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  7632468 attatatttttactttctctctctattgctttgatttttgtgccaa 7632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11546907 - 11546830
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | ||| |||| ||| ||||||| ||||||||    
T  11546907 attatatttttactttctctctctattactttgatatttgtgccaatacataattttttttgtaaaaatgtggttgtc 11546830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 15522422 - 15522539
Alignment:
Q  4 atatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatg 103  Q
    ||||||||||||| ||||| ||||| |||| |||| ||  ||| | ||  |||||||| |||||| ||||||||| | |||||| ||||||| ||| |||    
T  15522422 atatttttactttatctctatattgctttggttttcgtgtcaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaatcacattgatg 15522521  T
Q  104 ttgaaataagattgctct 121  Q
    || |||||| ||||||||    
T  15522522 ttcaaataacattgctct 15522539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 19165423 - 19165362
Alignment:
Q  17 ctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||||||||||||||| ||||||| |||| | ||| |||||||| ||||||||||||||||    
T  19165423 ctctctctattgttttggtttttgtgccaatacatatttttctttgtaaaaatatggttgtc 19165362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19232140 - 19232095
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  19232140 attatatttttactttctctctctattgctttgatttttgtgccaa 19232095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25221731 - 25221654
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||| |||||||||||||| |||||||||||| ||||| |||||| | ||  ||| |||||||||| ||||||||||    
T  25221731 attatgtttttactttctctttctattgttttggtttttataccaatacatcttttcctttataaaattatggttgtc 25221654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38381083 - 38381006
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||||| |  |  |||||||||| ||| ||||||||||    
T  38381083 attatgtttttattttctctctctattgctttgatttttgtaccaatacctctttttctttatgaaattatggttgtc 38381006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50980655 - 50980732
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||||| ||||  |||||| ||||| |||| | |||||||||||| ||||||| || |||||    
T  50980655 attatatttttactttctctctatattactttgatatttgtgccaatacatacttttctttgtaaaaatgtgattgtc 50980732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 35874903 - 35874844
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaa 66  Q
    |||||||||||||||||||||||||||||||  ||| ||| | |||||||||||| ||||    
T  35874903 tttttactttctctctctattgttttgatttccgtatcaatatatacttttctttgtaaa 35874844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36123466 - 36123399
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaa 68  Q
    |||||||||||||||||||||||||||  |||||||||||| | ||   |||||||||||| ||||||    
T  36123466 attatatttttactttctctctctattactttgatttttgtgcaaatgcatacttttctttgtaaaaa 36123399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12595637 - 12595560
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||| |||||||||||||||||||||||||| |||| ||  ||| |  |||||| |||||||||  ||||||||||    
T  12595637 attatacttttactttctctctctattgttttggttttcgtgtcaatacctactttcctttataaatttatggttgtc 12595560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27354361 - 27354316
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  27354361 attatgtttttactttttctctcaattgttttgatttttgtaccaa 27354316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31559603 - 31559640
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttt 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  31559603 attatatttttactttctctctctattgttttggtttt 31559640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 50890080 - 50890035
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||||    
T  50890080 attatatttttgctttctctctctattgctttgatttttgtgccaa 50890035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11068752 - 11068792
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  11068752 attatctttttactttctctctctattgctttgatttttgt 11068792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12387672 - 12387632
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  12387672 attatatttttactttgtctctttattgttttgatttttgt 12387632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26910266 - 26910306
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  26910266 attatttttttactttctctctctattgctttgatttttgt 26910306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37997318 - 37997358
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  37997318 attatctttttactttctctctctattgctttgatttttgt 37997358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 48649587 - 48649694
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgt 104  Q
    |||||||||||| ||||||||||  |||||| |||||  ||| | |||||||||||| | ||||| |||||||| |  | ||| |||| |||||| ||||    
T  48649587 tatttttactttttctctctattactttgatatttgtttcaatacatacttttctttgttaaaatgtggttgtctatttagttgtcaaacaaattgatgt 48649686  T
Q  105 tgaaataa 112  Q
    | ||||||    
T  48649687 tcaaataa 48649694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26908090 - 26908052
Alignment:
Q  1 attatatttttactttctctctctattgttttgattttt 39  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  26908090 attatatttttactttctctctatattgctttgattttt 26908052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 37514133 - 37514059
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatac-ttttctttataaaaatatggttgtcaa 80  Q
    |||||||||| ||||||||||| ||||||||| || ||||||  ||| |||||||| ||||  ||||||||||||    
T  37514133 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaatttatggttgtcaa 37514059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 336810 - 336769
Alignment:
Q  5 tatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||||| |||||||||||||||| |||||||||||| ||||    
T  336810 tatttttgctttctctctctattgctttgatttttgtgccaa 336769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5249933 - 5249970
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttt 38  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  5249933 attatgtttttactttctctctctattgttttggtttt 5249970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 5386444 - 5386477
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||| ||||||||||||    
T  5386444 ttttactttctctctctattgctttgatttttgt 5386477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 39440555 - 39440588
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||| ||||||||||||    
T  39440555 ttttactttctctctctattgctttgatttttgt 39440588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 50831754 - 50831685
Alignment:
Q  9 tttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||| ||||||||||||  ||| |  |  |||||||| ||||| ||||||||||    
T  50831754 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtc 50831685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 51577686 - 51577719
Alignment:
Q  8 ttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||| ||||||||||||    
T  51577686 ttttactttctctctctattgctttgatttttgt 51577719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 55609165 - 55609060
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttg 106  Q
    |||||| ||||||||||||||  ||||||||| || |||| | ||| |||||||| |||||| | ||||||| |  ||||| |||| |||||  |||||     
T  55609165 tttttattttctctctctattactttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaagcaaatagatgttc 55609066  T
Q  107 aaataa 112  Q
    ||||||    
T  55609065 aaataa 55609060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 3316421 - 3316453
Alignment:
Q  7 tttttactttctctctctattgttttgattttt 39  Q
    ||||||||||||||||||||||||||| |||||    
T  3316421 tttttactttctctctctattgttttggttttt 3316453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 9362682 - 9362650
Alignment:
Q  5 tatttttactttctctctctattgttttgattt 37  Q
    |||||||||||| ||||||||||||||||||||    
T  9362682 tatttttactttatctctctattgttttgattt 9362650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10250522 - 10250482
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  10250522 attatctttttactttctctctctattgctttggtttttgt 10250482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 24575852 - 24575780
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    |||||||||||||||||||||| |||| ||||||| |||| |  |  ||| |||||||||| | |||||||||    
T  24575852 tttttactttctctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtca 24575780  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26732289 - 26732329
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||| |||||||||||||||||||| |||||||    
T  26732289 attatctttttattttctctctctattgttttggtttttgt 26732329  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31641572 - 31641532
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||||||| |||| |||| ||||||||||||    
T  31641572 attatatttttactttctgtctccattgctttgatttttgt 31641532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36177970 - 36178014
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtacca 45  Q
    ||||| |||||||||||| ||||||||| |||| |||||||||||    
T  36177970 attatctttttactttctttctctattgctttggtttttgtacca 36178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37297113 - 37297153
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  37297113 attatctttttactttctctctctattgctttggtttttgt 37297153  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38134417 - 38134457
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||| |||||||||||||| |||||||    
T  38134417 attatctttttactttctttctctattgttttggtttttgt 38134457  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40348858 - 40348898
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  40348858 attatctttttactttctctctctattgctttggtttttgt 40348898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50721751 - 50721711
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||||||||||||||||||||||| || |||| |||||||    
T  50721751 attatatttttactttctctctctactgctttggtttttgt 50721711  T

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Target: scaffold0662 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 1226 - 1328
Alignment:
Q  18 tctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaattaatgttgaaataagattg 117  Q
    ||||||||||| |||| ||||||| |||| |||||||||||||| |||||||||| ||||||| |||||| |||| |||| | ||||| |||||| ||||    
T  1226 tctctctattgctttggtttttgtgccaatagatacttttctttgtaaaaatatgattgtcaatgtggttgtcaaccaaactgatgttcaaataacattg 1325  T
Q  118 ctc 120  Q
    |||    
T  1326 ctc 1328  T

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Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12562 - 12673
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaatcaaatta 100  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | |||||||||||  ||||||| |||||||| |  | ||| |||| ||||||     
T  12562 attatatttttactttctctctctattactttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaattg 12661  T
Q  101 atgttgaaataa 112  Q
    ||||| ||||||    
T  12662 atgttcaaataa 12673  T

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Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13423033 - 13423124
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtcaacgtggttatcaa 92  Q
    ||||||||||||||||||||||||||| ||||  ||||||| |||| | ||| |||||||| ||||||||| |||||| || ||||| ||||    
T  13423033 attatatttttactttctctctctattattttagtttttgtgccaatacatatttttctttgtaaaaatatagttgtccacttggttgtcaa 13423124  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16328706 - 16328628
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||||||||||||||||||| ||||||||||| |||| || |||| | |||| ||||||| ||||| |||||||||||    
T  16328706 attatatttttactttctctcactattgttttggttttcgtgccaatacatacatttctttgtaaaattatggttgtca 16328628  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16368053 - 16367975
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||||||||||||||||||| ||||||| ||| |||||||  ||| | |||| ||||||||||||||| || ||||||    
T  16368053 attatatttttactttctctcactattgtcttggtttttgtgtcaatacatacatttctttataaaaatgtgattgtca 16367975  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28630163 - 28630240
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    ||||||| |||||||||||| ||||||  |||||||||||| |||| | || ||||| ||| ||||||||||||||||    
T  28630163 attatatatttactttctctttctattactttgatttttgtgccaacacatgcttttatttgtaaaaatatggttgtc 28630240  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16337929 - 16337851
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtca 79  Q
    ||||||||||||||||||||| ||||||| ||| |||| ||  ||| | |||| ||||||| ||||||| |||||||||    
T  16337929 attatatttttactttctctcactattgtcttggttttcgtgtcaatacatacatttctttgtaaaaatgtggttgtca 16337851  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24900838 - 24900883
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||    
T  24900838 attatatttttactttctctctctattgctttggtttttgtgccaa 24900883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33651085 - 33651162
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||| ||| | |||||||| | ||  |||||||||||| | ||| |||||||| ||||||||||||||||    
T  33651085 attatatttttattttttatctctattatcttagtttttgtaccaatacataattttctttgtaaaaatatggttgtc 33651162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5694158 - 5694118
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  5694158 attatgtttttactttttctctctattgttttgatttttgt 5694118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6271414 - 6271454
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  6271414 attatgtttttactttctctctctattgttttggtttttgt 6271454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22079570 - 22079530
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  22079570 attatgtttttactttctctctctattgctttgatttttgt 22079530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 8990978 - 8991012
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||| ||||||||||||||||||||    
T  8990978 tttttactttctctttctattgttttgatttttgt 8991012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 9015425 - 9015459
Alignment:
Q  7 tttttactttctctctctattgttttgatttttgt 41  Q
    |||||||||||||| ||||||||||||||||||||    
T  9015425 tttttactttctctttctattgttttgatttttgt 9015459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16352167 - 16352101
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaa 67  Q
    ||||||||||||||||||||| ||||||||||| ||||  | |||| | |||| ||||||| |||||    
T  16352167 attatatttttactttctctcactattgttttggttttcatgccaatacatacatttctttgtaaaa 16352101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 31883302 - 31883233
Alignment:
Q  9 tttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||||||||||||||||| ||||||||||||  ||| |  |  |||||||| ||||| ||||||||||    
T  31883302 tttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtc 31883233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 552857 - 552897
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  552857 attatctttttactttctctctctattgctttggtttttgt 552897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17551385 - 17551345
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||| |||||||||||||||| |||||||    
T  17551385 attatgtttttactttatctctctattgttttggtttttgt 17551345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18737574 - 18737534
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  18737574 attatctttttactttctctctttattgttttggtttttgt 18737534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25811845 - 25811805
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  25811845 attatctttttactttctctctctattgctttggtttttgt 25811805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26595413 - 26595453
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  26595413 attatgtttttactttctctctctattgctttggtttttgt 26595453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 94888 - 94811
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaaaagatacttttctttataaaaatatggttgtc 78  Q
    |||||| ||||||||||||||||||||  |||||||||||| | || | ||| |||||||| ||||||||| ||||||    
T  94888 attataattttactttctctctctattactttgatttttgtgctaatacatatttttctttgtaaaaatatagttgtc 94811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10970 - 10930
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgt 41  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  10970 attatctttttactttctctctctattattttgatttttgt 10930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20908 - 20863
Alignment:
Q  1 attatatttttactttctctctctattgttttgatttttgtaccaa 46  Q
    ||||| |||||||||||||| ||||||| |||||||||| ||||||    
T  20908 attatgtttttactttctctttctattgctttgatttttctaccaa 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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