View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14482_high_6 (Length: 245)

Name: NF14482_high_6
Description: NF14482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14482_high_6
NF14482_high_6
[»] chr3 (22 HSPs)
chr3 (1-245)||(44806263-44806509)
chr3 (85-151)||(52594760-52594826)
chr3 (81-154)||(2812693-2812766)
chr3 (49-155)||(41246943-41247050)
chr3 (85-147)||(32025668-32025730)
chr3 (85-155)||(42463477-42463547)
chr3 (43-155)||(45692714-45692827)
chr3 (90-155)||(46318131-46318196)
chr3 (90-155)||(52858566-52858631)
chr3 (66-155)||(2599936-2600026)
chr3 (81-147)||(20451106-20451172)
chr3 (85-155)||(40932348-40932418)
chr3 (85-155)||(46972702-46972772)
chr3 (81-155)||(48120566-48120640)
chr3 (85-155)||(52165504-52165574)
chr3 (66-136)||(37712577-37712648)
chr3 (90-136)||(41519219-41519265)
chr3 (85-155)||(42497716-42497786)
chr3 (85-155)||(47175074-47175144)
chr3 (85-155)||(52226017-52226087)
chr3 (106-155)||(45369524-45369573)
chr3 (82-131)||(52867577-52867626)
[»] chr2 (28 HSPs)
chr2 (81-168)||(4056541-4056628)
chr2 (85-155)||(10820100-10820170)
chr2 (40-145)||(34807349-34807455)
chr2 (81-147)||(7510824-7510890)
chr2 (85-155)||(40868778-40868848)
chr2 (90-155)||(2759493-2759558)
chr2 (84-168)||(15250653-15250737)
chr2 (85-155)||(6760016-6760086)
chr2 (85-155)||(44276409-44276479)
chr2 (81-155)||(44880452-44880526)
chr2 (85-141)||(10728796-10728852)
chr2 (81-145)||(13762432-13762496)
chr2 (81-145)||(24020555-24020619)
chr2 (85-136)||(6153088-6153139)
chr2 (88-155)||(12737928-12737995)
chr2 (85-136)||(13350703-13350754)
chr2 (85-155)||(6231607-6231676)
chr2 (81-147)||(7693348-7693414)
chr2 (90-140)||(8566403-8566453)
chr2 (85-155)||(9052488-9052558)
chr2 (85-155)||(26912239-26912309)
chr2 (85-155)||(38880186-38880256)
chr2 (90-155)||(2046555-2046620)
chr2 (208-245)||(15250548-15250585)
chr2 (85-130)||(26411406-26411451)
chr2 (82-131)||(34886747-34886796)
chr2 (85-130)||(37709232-37709277)
chr2 (85-142)||(38843474-38843531)
[»] chr1 (33 HSPs)
chr1 (88-155)||(17410591-17410658)
chr1 (32-155)||(6814755-6814879)
chr1 (85-154)||(2022734-2022803)
chr1 (90-155)||(15732547-15732612)
chr1 (46-155)||(10628196-10628306)
chr1 (85-155)||(15349551-15349621)
chr1 (85-147)||(34319209-34319271)
chr1 (85-155)||(36378434-36378504)
chr1 (85-155)||(46928339-46928409)
chr1 (110-175)||(7780585-7780650)
chr1 (81-137)||(27658739-27658795)
chr1 (81-136)||(26063517-26063572)
chr1 (81-148)||(50939609-50939676)
chr1 (85-155)||(12892229-12892299)
chr1 (90-155)||(19716499-19716564)
chr1 (85-150)||(29379609-29379674)
chr1 (85-154)||(41650031-41650100)
chr1 (85-155)||(7025541-7025611)
chr1 (85-155)||(8220466-8220535)
chr1 (85-155)||(17499291-17499360)
chr1 (85-155)||(26844402-26844471)
chr1 (85-155)||(34320051-34320121)
chr1 (85-155)||(37671570-37671639)
chr1 (85-151)||(40720128-40720194)
chr1 (90-140)||(42695383-42695433)
chr1 (85-155)||(47133978-47134047)
chr1 (85-155)||(50351684-50351753)
chr1 (90-155)||(16084972-16085037)
chr1 (82-131)||(34087673-34087722)
chr1 (90-155)||(49184545-49184610)
chr1 (81-145)||(19453176-19453240)
chr1 (90-142)||(42964532-42964584)
chr1 (85-129)||(49239407-49239451)
[»] chr8 (28 HSPs)
chr8 (85-147)||(38782495-38782558)
chr8 (85-147)||(3427133-3427195)
chr8 (85-147)||(3512288-3512350)
chr8 (85-155)||(40046216-40046286)
chr8 (95-155)||(15278593-15278653)
chr8 (95-155)||(15458962-15459022)
chr8 (85-155)||(37559945-37560015)
chr8 (90-175)||(44427420-44427505)
chr8 (85-155)||(10653366-10653436)
chr8 (85-155)||(24666234-24666304)
chr8 (85-155)||(34394774-34394844)
chr8 (85-155)||(45152685-45152755)
chr8 (85-154)||(9211648-9211717)
chr8 (85-137)||(1363251-1363303)
chr8 (119-175)||(13970621-13970677)
chr8 (94-153)||(2731307-2731366)
chr8 (85-155)||(22877243-22877314)
chr8 (85-155)||(2641827-2641897)
chr8 (85-155)||(32100259-32100329)
chr8 (85-155)||(36590878-36590948)
chr8 (38-155)||(40552513-40552631)
chr8 (82-136)||(44157912-44157966)
chr8 (95-136)||(31523160-31523201)
chr8 (90-155)||(39746058-39746123)
chr8 (95-143)||(17756646-17756694)
chr8 (95-143)||(17765633-17765681)
chr8 (81-145)||(39678036-39678100)
chr8 (95-155)||(40222447-40222506)
[»] chr6 (16 HSPs)
chr6 (43-141)||(31049947-31050046)
chr6 (85-155)||(27720056-27720126)
chr6 (85-155)||(7317018-7317088)
chr6 (81-175)||(21897360-21897454)
chr6 (85-147)||(5301015-5301077)
chr6 (85-155)||(5682227-5682297)
chr6 (38-142)||(11016296-11016401)
chr6 (83-155)||(12140277-12140349)
chr6 (96-136)||(15590590-15590630)
chr6 (82-142)||(28077131-28077191)
chr6 (85-155)||(3636314-3636384)
chr6 (81-131)||(22756924-22756974)
chr6 (85-142)||(10856794-10856851)
chr6 (85-154)||(20564109-20564178)
chr6 (90-142)||(12297973-12298025)
chr6 (81-155)||(32650733-32650804)
[»] scaffold0349 (1 HSPs)
scaffold0349 (85-155)||(9478-9548)
[»] chr5 (18 HSPs)
chr5 (85-155)||(31408730-31408800)
chr5 (85-147)||(6279741-6279803)
chr5 (90-154)||(11663327-11663391)
chr5 (85-136)||(13947543-13947594)
chr5 (27-145)||(16475354-16475473)
chr5 (85-155)||(1175426-1175496)
chr5 (85-155)||(3670946-3671016)
chr5 (85-155)||(6892855-6892925)
chr5 (85-155)||(10697928-10697998)
chr5 (85-155)||(11100054-11100124)
chr5 (85-155)||(30773593-30773663)
chr5 (85-155)||(35236009-35236079)
chr5 (27-155)||(23921671-23921799)
chr5 (95-147)||(649323-649375)
chr5 (81-131)||(6350210-6350260)
chr5 (85-142)||(22653362-22653419)
chr5 (85-142)||(35640606-35640663)
chr5 (85-129)||(43571182-43571226)
[»] chr4 (35 HSPs)
chr4 (42-147)||(11051020-11051126)
chr4 (85-155)||(33510011-33510081)
chr4 (85-155)||(55765225-55765295)
chr4 (95-155)||(4464880-4464940)
chr4 (90-154)||(49551637-49551701)
chr4 (85-155)||(35842202-35842272)
chr4 (110-175)||(24953650-24953715)
chr4 (90-155)||(31435654-31435719)
chr4 (85-145)||(17716344-17716404)
chr4 (85-155)||(6183764-6183834)
chr4 (85-155)||(29627662-29627732)
chr4 (85-155)||(35580361-35580431)
chr4 (85-155)||(36485776-36485846)
chr4 (85-155)||(37970959-37971029)
chr4 (85-155)||(43077564-43077634)
chr4 (85-155)||(44433182-44433252)
chr4 (85-155)||(55829651-55829721)
chr4 (82-147)||(2187742-2187807)
chr4 (90-147)||(30365506-30365563)
chr4 (90-131)||(31953726-31953767)
chr4 (90-155)||(40120531-40120596)
chr4 (93-149)||(43326628-43326684)
chr4 (95-155)||(56269512-56269572)
chr4 (88-155)||(56544994-56545061)
chr4 (82-160)||(7390582-7390660)
chr4 (85-147)||(22431455-22431517)
chr4 (85-155)||(22893190-22893260)
chr4 (85-155)||(22944858-22944928)
chr4 (85-155)||(25198735-25198804)
chr4 (90-136)||(27381750-27381796)
chr4 (81-123)||(36197525-36197567)
chr4 (85-154)||(37832603-37832671)
chr4 (88-136)||(26827186-26827234)
chr4 (95-155)||(41863515-41863575)
chr4 (85-155)||(50503161-50503228)
[»] chr7 (22 HSPs)
chr7 (81-154)||(35001544-35001617)
chr7 (90-155)||(36407896-36407961)
chr7 (85-147)||(17845222-17845284)
chr7 (85-147)||(23030495-23030557)
chr7 (82-136)||(7884086-7884140)
chr7 (85-155)||(9486433-9486503)
chr7 (90-152)||(14101103-14101165)
chr7 (90-152)||(14411120-14411182)
chr7 (85-155)||(33608155-33608225)
chr7 (85-155)||(43135078-43135148)
chr7 (85-154)||(38530569-38530638)
chr7 (85-154)||(40894040-40894109)
chr7 (90-155)||(44597280-44597345)
chr7 (98-155)||(48730199-48730256)
chr7 (95-155)||(48621047-48621107)
chr7 (85-155)||(482406-482476)
chr7 (85-155)||(24171461-24171531)
chr7 (82-136)||(24838570-24838623)
chr7 (81-149)||(7909020-7909088)
chr7 (95-131)||(27867109-27867145)
chr7 (85-129)||(49054426-49054470)
chr7 (95-155)||(49148872-49148932)
[»] scaffold0011 (1 HSPs)
scaffold0011 (85-155)||(64586-64656)
[»] scaffold0633 (1 HSPs)
scaffold0633 (85-154)||(4896-4965)
[»] scaffold0041 (1 HSPs)
scaffold0041 (85-154)||(72175-72244)
[»] scaffold0009 (1 HSPs)
scaffold0009 (82-142)||(192719-192779)
[»] scaffold0002 (1 HSPs)
scaffold0002 (85-155)||(98522-98591)
[»] scaffold0173 (1 HSPs)
scaffold0173 (85-137)||(22315-22367)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 44806263 - 44806509
Alignment:
Q  1 ctttttacaacatacactatgttttataaaaatagcgtataactgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaa 99  Q
    |||||||||||||  |||||||||  |||| |||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||    
T  44806263 ctttttacaacattgactatgtttggtaaatatagcgtatagctgatagtttatagttgatggccgatagctgctaaattaattaaagtatttggtaaaa 44806362  T
Q  100 ttaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattctaatataattattaacttattattttttgctctttc-nnnnnnn 198  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  44806363 ttaacggttcaactagcttataaatgtaaaatgacattaaaggacatttttaattctaatataattattaacttattattttttgctctttcaaaaaaaa 44806462  T
Q  199 nnnngactcttttgttgaagtttcattttaaatttatttcatctcag 245  Q
         |||||||||||||||||| |||||||||||||||||| ||||    
T  44806463 aaaatactcttttgttgaagttttattttaaatttatttcatttcag 44806509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 52594760 - 52594826
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacattttta 151  Q
    |||| |||| ||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||    
T  52594760 aagtgtttggtaaaattaacggttcaactgacttataaatataaaatgacataaaaggacattttta 52594826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 2812693 - 2812766
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||||||| |||| |||||||| ||||||||||| || ||||||||||||| |||| |||||||||| ||||||    
T  2812693 attaaagtgtttggtaaaattagcggttcaactacctaataaatgtaaaatgacataaaaggacattcttaatt 2812766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 41247050 - 41246943
Alignment:
Q  49 gtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||||||||||| ||| |||||||| |||  || || |||| |||||||||||||  ||||||| || || ||| ||||||||| |||| ||||||||||    
T  41247050 gtttatagctgatggcggatagctgataagctacttgaagtgtttgataaaattagtggttcaattagctgatagatgtaaaattacataaaaggacatt 41246951  T
Q  148 tttaattc 155  Q
    ||||||||    
T  41246950 tttaattc 41246943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 32025668 - 32025730
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| ||||||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  32025668 aagtgtttggtaaaattagtggttcaactaacttataaatgtaaaatgacataaaaggacatt 32025730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 42463477 - 42463547
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||||||||||||||| ||||| ||| ||||||||| |||| |||| |||||||||||||    
T  42463477 aagtgtttggtaaaattaacggttcaattaactgatagatgtaaaattacataaaagaacatttttaattc 42463547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 45692714 - 45692827
Alignment:
Q  43 ctgatagtttatagctgagggccgatagctgctaaattatta-aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaag 141  Q
    ||||||| |||||||||| |||  ||||||| |||| ||||  ||||  ||| ||||||||||||||||| || || ||| ||||||||| |||| |||     
T  45692714 ctgatagcttatagctgatggcttatagctgataaactatttgaagtgattggtaaaattaacggttcaattagctgatagatgtaaaattacataaaat 45692813  T
Q  142 gacatttttaattc 155  Q
    ||||||||||||||    
T  45692814 gacatttttaattc 45692827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 46318131 - 46318196
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| |||||||| || || ||||||||||||| |||| ||||||||||||||||||    
T  46318131 tttggtaaaattagcggttcaattagctgataaatgtaaaattacataaaaggacatttttaattc 46318196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 52858631 - 52858566
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  52858631 tttgataaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 52858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 2600026 - 2599936
Alignment:
Q  66 gatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| |||| || ||||||| | || |||||||| | ||||||||| || | |||| ||||||||||| ||||||||||||||||||    
T  2600026 gatagctgataaactacttaaagtgtgtggtaaaattagcagttcaactagctgaaaaatataaaataacataaaaggacatttttaattc 2599936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 20451172 - 20451106
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||||||| |||| |||||||| ||||||||||| || ||||||||||||| |||| |||| |||||    
T  20451172 attaaagtgtttggtaaaattagcggttcaactagctgataaatgtaaaatgacataaaagcacatt 20451106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 40932348 - 40932418
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || | |||| ||||||||| |||| ||||||||||||||||||    
T  40932348 aagtgtttggtaaaattagcggttcaattagcatatatatgtaaaattacataaaaggacatttttaattc 40932418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 46972772 - 46972702
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  46972772 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 46972702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 48120566 - 48120640
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||||||| || |||||||| ||||||||  | ||||||||||||| | || ||| ||||||||||||||    
T  48120566 attaaagtatttggtagaattaacgattcaactatatgataaatgtaaaatgatataaaatgacatttttaattc 48120640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 52165504 - 52165574
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  52165504 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 52165574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 37712577 - 37712648
Alignment:
Q  66 gatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||||||| ||||||| ||||||| |||| ||||| || ||||||||||| || ||||||||||||| ||||    
T  37712577 gatagctgataaattagttaaagtgtttggtaaaactagcggttcaactagctgataaatgtaaaatgacat 37712648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 41519265 - 41519219
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    ||||||||||| ||||||||||||| || ||||||||||||| ||||    
T  41519265 tttgataaaatgaacggttcaactagctgataaatgtaaaatgacat 41519219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 42497786 - 42497716
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||||||||||||| |||||||| || || ||| ||| ||||| | || |||||| |||||||||||    
T  42497786 aagtatttgataaaattagcggttcaattagctgatagatgcaaaattagataaaaggatatttttaattc 42497716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 47175144 - 47175074
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| || ||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  47175144 aagtgtttggtaaaattagcgattcaattagctgatagatgtaaaattacataaaaggacatttttaattc 47175074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 52226087 - 52226017
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || || ||| ||||||||| |||| ||| ||||||||||||||    
T  52226087 aagtgtttggtaaaattagcggttcaattagctgatagatgtaaaattacataaaatgacatttttaattc 52226017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 45369573 - 45369524
Alignment:
Q  106 gttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||||||| ||||||||||||| |||| |||||| ||| |||||||    
T  45369573 gttcaactaactgataaatgtaaaatgacataaaaggatattattaattc 45369524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 52867577 - 52867626
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaat 131  Q
    ||||||| |||| |||||||| ||||||||||| || |||||||||||||    
T  52867577 ttaaagtgtttggtaaaattagcggttcaactagctgataaatgtaaaat 52867626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 4056628 - 4056541
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattctaatataattatt 168  Q
    |||||||| |||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  4056628 attaaagtgtttggtaaaattaacggttcaactgactgataaatgtaaaataacataaaaggacatttttaattataataaaattatt 4056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 10820170 - 10820100
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||  |||| ||| ||||||||||||||    
T  10820170 aagtatttggtaaaattaacggttcaactaactgataagtgtaaaaagacataaaatgacatttttaattc 10820100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 34807455 - 34807349
Alignment:
Q  40 taactgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacatta 138  Q
    ||||||||||||||||| ||| | | |||||||| |||  || ||||||| |||| ||||||||||||||||||||||| ||||| ||||||| || | |    
T  34807455 taactgatagtttatagttgatgactgatagctgataagctaattaaagtgtttggtaaaattaacggttcaactaactaataaaggtaaaatgacttaa 34807356  T
Q  139 aaggaca 145  Q
    |||||||    
T  34807355 aaggaca 34807349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 7510824 - 7510890
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||||||| ||||||||||||| ||||||||||| || |||||| |||||| |||| ||||||||||    
T  7510824 attaaagtgtttgataaaattagcggttcaactagctgataaatataaaatgacataaaaggacatt 7510890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 40868778 - 40868848
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  40868778 aagtgtttgataaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 40868848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 2759558 - 2759493
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| ||||||||||| || ||||||||||||| |||| ||| ||||||||||||||    
T  2759558 tttggtaaaattagcggttcaactagctgataaatgtaaaatgacataaaaagacatttttaattc 2759493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 15250737 - 15250653
Alignment:
Q  84 aaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattctaatataattatt 168  Q
    ||||| |||| || ||||| | |||||||||  | ||||||||||| | |||| ||||||||||||||||||||||| |||||||    
T  15250737 aaagtgtttggtataattagcagttcaactagttgataaatgtaaagtgacataaaaggacatttttaattctaataaaattatt 15250653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 6760016 - 6760086
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||||||||||||||| || |||||||| ||||||| |||| |||||  |||||||||||    
T  6760016 aagtgtttggtaaaattaacggttcaattagcttataaacgtaaaatgacataaaagggtatttttaattc 6760086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 44276479 - 44276409
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  44276479 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 44276409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 44880526 - 44880452
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| |||| |||||||||||||| |||||| | ||||||||||||| |||| |||| || || |||||||    
T  44880526 attaaagtgtttggtaaaattaacggttaaactaattgataaatgtaaaatgacataaaagaactttcttaattc 44880452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 10728852 - 10728796
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaag 141  Q
    ||||||||||||||| || ||||||||||| || ||||||||||||| |||| ||||    
T  10728852 aagtatttgataaaaatagcggttcaactagctgataaatgtaaaatgacataaaag 10728796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 13762496 - 13762432
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggaca 145  Q
    |||||| | ||||||||||||| |||||||||||||| ||||| ||||||| || | ||||||||    
T  13762496 attaaattgtttgataaaattagcggttcaactaactaataaaggtaaaattacttaaaaggaca 13762432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 24020619 - 24020555
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggaca 145  Q
    |||||||| |||| |||||||| |||||||||||||| ||||| ||||||| || | ||||||||    
T  24020619 attaaagtgtttggtaaaattagcggttcaactaactaataaaggtaaaatgacttaaaaggaca 24020555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 6153088 - 6153139
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    ||||||||| ||||| || ||||||||||| || ||||||||||||||||||    
T  6153088 aagtatttggtaaaaatagcggttcaactagctgataaatgtaaaataacat 6153139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 12737928 - 12737995
Alignment:
Q  88 tatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||| ||||||||| ||||||||||  | |||||| ||||||||||| ||||| |||| |||||||    
T  12737928 tatttggtaaaattaatggttcaactagttgataaatataaaataacataaaaggccattcttaattc 12737995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 13350703 - 13350754
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||| |||| ||||| |||||||||||||| || ||||||||||||||||||    
T  13350703 aagtgtttggtaaaaataacggttcaactagctaataaatgtaaaataacat 13350754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 6231607 - 6231676
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| ||| | ||| ||||||||| |||| ||||||||||||||||||    
T  6231607 aagtgtttggtaaaattagcggttcaattaa-tgatagatgtaaaattacataaaaggacatttttaattc 6231676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 7693414 - 7693348
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||||||| |||||| |||| | ||||||||||  || |||| |||||||| |||||||||||||||    
T  7693414 attaaagtgtttgatcaaatcagcggttcaactggctaataattgtaaaatgacattaaaggacatt 7693348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 8566403 - 8566453
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaa 140  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||| ||||||    
T  8566403 tttgataaaattaacggttgaactaacttgtaaataaaaaataatattaaa 8566453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 9052488 - 9052558
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| | |||||| || || ||  ||||||||| |||| ||||||||||||||||||    
T  9052488 aagtgtttgataaaattagcagttcaattagctgatggatgtaaaattacataaaaggacatttttaattc 9052558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 26912309 - 26912239
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || || ||  ||||||||| |||| ||||||||||||||||||    
T  26912309 aagtgtttggtaaaattagcggttcaattagctgattgatgtaaaattacataaaaggacatttttaattc 26912239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 38880186 - 38880256
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| ||||   |||||||||||    
T  38880186 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagagtatttttaattc 38880256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 2046555 - 2046620
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| | |||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  2046555 tttggtaaaattagcagttcaattagctgatagatgtaaaattacataaaaggacatttttaattc 2046620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 15250585 - 15250548
Alignment:
Q  208 ttttgttgaagtttcattttaaatttatttcatctcag 245  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  15250585 ttttgttgaagtttcattttaaatttattccatttcag 15250548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 26411451 - 26411406
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaa 130  Q
    |||| |||| |||||||| |||||||||||||| ||||||||||||    
T  26411451 aagtgtttggtaaaattaccggttcaactaactaataaatgtaaaa 26411406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 34886796 - 34886747
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaat 131  Q
    ||||||||||||||||||||| | |||||||||  | |||||||||||||    
T  34886796 ttaaagtatttgataaaattagctgttcaactagttgataaatgtaaaat 34886747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 37709277 - 37709232
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaa 130  Q
    ||||||||| ||||| || |||||||||||||| ||||||||||||    
T  37709277 aagtatttggtaaaactagcggttcaactaactgataaatgtaaaa 37709232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 38843531 - 38843474
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    |||| |||| |||||||| ||||||||||| || ||||||||||||| |||| |||||    
T  38843531 aagtgtttggtaaaattagcggttcaactagctgataaatgtaaaatgacataaaagg 38843474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 17410658 - 17410591
Alignment:
Q  88 tatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||||||    
T  17410658 tatttgataaaattaacggttcaactatttaataaatgtaaaataacattaaagaacatttttaattc 17410591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 155
Target Start/End: Complemental strand, 6814879 - 6814755
Alignment:
Q  32 atagcgtataactgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaa 130  Q
    ||||| ||||||||||   |||||||||| | | |||||||| |||  || || |||| ||||| ||||||||||||||||||| || ||||||||||||    
T  6814879 atagcttataactgatgaattatagctgatgactgatagctgataagctacttgaagtgtttgacaaaattaacggttcaactagctaataaatgtaaaa 6814780  T
Q  131 taacattaaaggacatttttaattc 155  Q
    | |||| ||| ||||||||||||||    
T  6814779 ttacataaaaagacatttttaattc 6814755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 2022734 - 2022803
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| |||||||| ||||  ||||||||||||||||||||||||||| |||||||||| ||||||    
T  2022734 aagtgtttggtaaaattagcggtagaactaacttataaatgtaaaataacataaaaggacattcttaatt 2022803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 15732612 - 15732547
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||||| |||||||||||| ||||||||||||| | |||||| ||||||||||||||    
T  15732612 tttggtaaaattaacagttcaactaactgataaatgtaaaatgatattaaaagacatttttaattc 15732547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 10628196 - 10628306
Alignment:
Q  46 atagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggac 144  Q
    ||||||||||||||| | | |||||||| |||| || || |||| | || |||||||||||||||||||   | ||||||||||||| | || |||||||    
T  10628196 atagtttatagctgatgactgatagctgataaactacttgaagtgtatggtaaaattaacggttcaactggttgataaatgtaaaatgatataaaaggac 10628295  T
Q  145 atttttaattc 155  Q
    |||||||||||    
T  10628296 atttttaattc 10628306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 15349621 - 15349551
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| ||||| ||| ||||||||| |||| ||||||||||||||||||    
T  15349621 aagtgtttggtaaaattagcggttcaattaactgatagatgtaaaattacataaaaggacatttttaattc 15349551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 34319271 - 34319209
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| ||||||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  34319271 aagtgtttggtaaaattagtggttcaactaacttataaatgtaaaatgacataaaaggacatt 34319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 36378434 - 36378504
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| ||||| ||| ||||||||| |||| ||||||||||||||||||    
T  36378434 aagtgtttggtaaaattagcggttcaattaactgatagatgtaaaattacataaaaggacatttttaattc 36378504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 46928339 - 46928409
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||||||||||||||| ||||| ||| ||||||||| |||| ||| ||||||||||||||    
T  46928339 aagtgtttggtaaaattaacggttcaattaactgatagatgtaaaattacataaaaagacatttttaattc 46928409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 7780585 - 7780650
Alignment:
Q  110 aactaacttataaatgtaaaataacattaaaggacatttttaattctaatataattattaacttat 175  Q
    ||||| || ||||||||||||| |||| |||||||||||||| |||||||| ||||||||| ||||    
T  7780585 aactagctgataaatgtaaaatgacataaaaggacatttttatttctaataaaattattaaattat 7780650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 27658739 - 27658795
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacatt 137  Q
    |||||| | |||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  27658739 attaaaatgtttggtaaaattaacggttcaactaactgataaatgtaaaatgacatt 27658795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 26063517 - 26063572
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||||||| ||||||||||||||| ||||||||| || ||||||||||||| ||||    
T  26063517 attaaagtgtttgataaaattaacagttcaactagctgataaatgtaaaatgacat 26063572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 50939609 - 50939676
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacattt 148  Q
    |||||| ||||||||||||||||| ||| || || ||||||||| |||||| ||||||||| ||||||    
T  50939609 attaaaatatttgataaaattaactgttgaattagcttataaatataaaatgacattaaagaacattt 50939676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 12892299 - 12892229
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||| | || ||||||||||||| |||| ||| ||||||||||||||    
T  12892299 aagtgtttggtaaaattagcggttcaaccagctgataaatgtaaaattacataaaatgacatttttaattc 12892229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 19716564 - 19716499
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| | ||| ||||| || ||||||||||||| |||| ||||||||||||||||||    
T  19716564 tttggtaaaattagcagtttaactagctgataaatgtaaaattacataaaaggacatttttaattc 19716499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 29379674 - 29379609
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacattttt 150  Q
    |||| |||| ||||| || ||||||||||| || ||||||||||||| |||| |||||||||||||    
T  29379674 aagtgtttggtaaaaatagcggttcaactagctgataaatgtaaaatgacataaaaggacattttt 29379609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 41650031 - 41650100
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| ||||||||||| |||||||| || ||||||||||||| | || |||||||||| ||||||    
T  41650031 aagtgtttggtaaaattaacgattcaactatctgataaatgtaaaattatataaaaggacattcttaatt 41650100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 7025611 - 7025541
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || |||||| ||||||||| |||| |||  |||||||||||||    
T  7025611 aagtgtttggtaaaattagcggttcaattagcttatatatgtaaaattacataaaattacatttttaattc 7025541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 8220466 - 8220535
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||||| |||||||||||||| || |||||| |||||| ||| ||||||| ||| |||||||    
T  8220466 aagtgtttgataaaaataacggttcaactagctgataaatataaaatgaca-taaaggatattattaattc 8220535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 17499291 - 17499360
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||| || |||||||||||||| ||||||||||||| ||| ||||||| ||| |||||||    
T  17499291 aagtgtttggtaaaaatagcggttcaactaactgataaatgtaaaatgaca-taaaggatattcttaattc 17499360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 26844471 - 26844402
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||| || | |||||||||||| ||||||||||||||||| ||||||| ||| |||||||    
T  26844471 aagtgtttggtaaaagtagcagttcaactaactgataaatgtaaaataaca-taaaggatattcttaattc 26844402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 34320121 - 34320051
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| | ||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  34320121 aagtgtttggtaaaattagcagttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 34320051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 37671570 - 37671639
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||||||  ||||||| ||||| ||| ||||||||| |||| ||||||||||||||||||    
T  37671570 aagtgtttggtaaaattagtggttcaattaact-atagatgtaaaattacataaaaggacatttttaattc 37671639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 40720194 - 40720128
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacattttta 151  Q
    |||| |||| |||||||| |||||||| ||||| ||| ||||||||| |||| | ||||||||||||    
T  40720194 aagtgtttggtaaaattagcggttcaattaactgatagatgtaaaattacataagaggacattttta 40720128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 42695383 - 42695433
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaa 140  Q
    ||||||||||||||| ||| || |||||||||||| |||||| ||||||||    
T  42695383 tttgataaaattaacagttgaaataacttataaatataaaatgacattaaa 42695433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 47133978 - 47134047
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||| || |||||||||||||| ||||||||||||| ||| ||||||| ||| |||||||    
T  47133978 aagtgtttggtaaaaatagcggttcaactaactgataaatgtaaaatgaca-taaaggatattcttaattc 47134047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 50351753 - 50351684
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||| |||||||||||||| || ||||||||||||| ||| ||||||| ||| |||||||    
T  50351753 aagtgtttggtaaaaataacggttcaactagctgataaatgtaaaatgaca-taaaggatattcttaattc 50351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 16084972 - 16085037
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| |  |||||||| || ||||||||||||| |||| |||||| |||||||||||    
T  16084972 tttggtaaaattagcaattcaactagctgataaatgtaaaatgacataaaaggatatttttaattc 16085037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 34087722 - 34087673
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaat 131  Q
    ||||||| |||| |||||||| ||||||||||| || |||||||||||||    
T  34087722 ttaaagtgtttggtaaaattagcggttcaactagctgataaatgtaaaat 34087673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 49184545 - 49184610
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| |||||||| ||  | ||| ||||||||| |||| ||||||||||||||||||    
T  49184545 tttggtaaaattagcggttcaattagttgatagatgtaaaattacataaaaggacatttttaattc 49184610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 19453176 - 19453240
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggaca 145  Q
    |||||||||| || |||||||| || |||||||| || ||||||||||||  |||| ||||||||    
T  19453176 attaaagtatctggtaaaattagcgattcaactagctaataaatgtaaaacgacataaaaggaca 19453240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 42964584 - 42964532
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    |||| ||||||||||||||||||||  | ||||||||||||| |||| |||||    
T  42964584 tttggtaaaattaacggttcaactagttgataaatgtaaaatgacataaaagg 42964532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 49239407 - 49239451
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaa 129  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||    
T  49239407 aagtgtttgataaaattagcagttcaactgacttataaatgtaaa 49239451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 38782558 - 38782495
Alignment:
Q  85 aagtatttgataaaattaa-cggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  38782558 aagtgtttggtaaaattaaacggttcaactaacttataaatgtaaaataacataaaaggacatt 38782495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 3427133 - 3427195
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  3427133 aagtgtttggtaaaattagcggttcaactgacttataaatgtaaaataacataaaaggacatt 3427195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 3512350 - 3512288
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||    
T  3512350 aagtgtttgataaaattaacggttcaactgatttataaatgtaaaatgacataaaaggacatt 3512288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 40046286 - 40046216
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||||||||||| |||||| ||| |||||||||||| |||| ||||||||||||||||||    
T  40046286 aagtgtttggtaaaattaacggtgcaactagcttgtaaatgtaaaatgacataaaaggacatttttaattc 40046216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 15278593 - 15278653
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| |||||||| ||||| ||||||||||||| |||| ||||||||||||||||||    
T  15278593 taaaattagcggttcaattaactgataaatgtaaaattacataaaaggacatttttaattc 15278653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 15458962 - 15459022
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| |||||||| ||||| ||||||||||||| |||| ||||||||||||||||||    
T  15458962 taaaattagcggttcaattaactgataaatgtaaaattacataaaaggacatttttaattc 15459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 37559945 - 37560015
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  37559945 aagtgtttgataaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 37560015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 44427420 - 44427505
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattctaatataattattaacttat 175  Q
    ||||||||||||| |||||||| || |  |||||||||||||||  | ||| | ||||||||||||||||| ||||||||| ||||    
T  44427420 tttgataaaattaccggttcaaatatcagataaatgtaaaataatgtaaaaaggcatttttaattctaataaaattattaaattat 44427505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 10653436 - 10653366
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| ||||| ||| ||||||||| | || ||||||||||||||||||    
T  10653436 aagtgtttggtaaaattagcggttcaattaactgatagatgtaaaattatataaaaggacatttttaattc 10653366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 24666304 - 24666234
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  24666304 aagtgtttggtaaaattagcggttcaattagctgatagatgtaaaattacataaaaggacatttttaattc 24666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 34394774 - 34394844
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| ||||| | ||| |||||||||||||||| |||| ||| || |||||||||||    
T  34394774 aagtgtttgataaaattagcggtttatctagcttataaatgtaaaatgacataaaaagatatttttaattc 34394844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 45152755 - 45152685
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||||||||||||||| || ||||||||||||| |||| ||||  |||| |||||||    
T  45152755 aagtgtttggtaaaattaacggttcaactagctgataaatgtaaaatgacataaaagagcattcttaattc 45152685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 9211717 - 9211648
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  ||||||||||    
T  9211717 aagtgtttggtaaaattagcggttcaactagcttataaaagtaaaatgacataaaagggtatttttaatt 9211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 1363251 - 1363303
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacatt 137  Q
    |||||||||||||||||| | || ||||||||||||| ||||||||| |||||    
T  1363251 aagtatttgataaaattagcagtacaactaacttatagatgtaaaatgacatt 1363303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 13970677 - 13970621
Alignment:
Q  119 ataaatgtaaaataacattaaaggacatttttaattctaatataattattaacttat 175  Q
    ||||||||||||| |||| |||| ||||||||| |||||||| ||||||||| ||||    
T  13970677 ataaatgtaaaatgacataaaagaacatttttatttctaataaaattattaaattat 13970621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 2731307 - 2731366
Alignment:
Q  94 ataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaat 153  Q
    ||||||||| || ||||||||||| ||||||||||||| | || |||||||||| |||||    
T  2731307 ataaaattagcgtttcaactaactaataaatgtaaaatgatataaaaggacattcttaat 2731366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 22877243 - 22877314
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat-taaaggacatttttaattc 155  Q
    |||| |||| ||||||||||||||||| || || ||| ||||||||| ||||  ||||||||||||||||||    
T  22877243 aagtgtttggtaaaattaacggttcaattagctgatagatgtaaaattacataaaaaggacatttttaattc 22877314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 2641827 - 2641897
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| ||||   |||||||||||    
T  2641827 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagagtatttttaattc 2641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 32100329 - 32100259
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||  |||||||| |||||||| || || |||||||||||||  ||| ||||| ||||||||||||    
T  32100329 aagtatttcgtaaaattagcggttcaattagctaataaatgtaaaattgcataaaaggtcatttttaattc 32100259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 36590948 - 36590878
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || || ||| ||||||||| |||| |||||| |||||||||||    
T  36590948 aagtgtttggtaaaattagcggttcaattagctgatagatgtaaaattacataaaaggatatttttaattc 36590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 40552631 - 40552513
Alignment:
Q  38 tataactgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    ||||||| || |||||||||||| | | |||||||| |||  || || |||| |||  |||||||| |||||||| ||||| ||| ||||| ||| ||||    
T  40552631 tataacttatggtttatagctgatgactgatagctgataagctacttgaagtgtttagtaaaattagcggttcaattaactgatagatgtataattacat 40552532  T
Q  137 taaaggacatttttaattc 155  Q
     ||| ||||||||||||||    
T  40552531 aaaaagacatttttaattc 40552513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 44157966 - 44157912
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    ||||||| |||| ||||||||  ||||||||||||| ||||||||||||| ||||    
T  44157966 ttaaagtgtttggtaaaattagtggttcaactaactgataaatgtaaaatgacat 44157912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 31523201 - 31523160
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||||||||||||||||||| || ||||||||||||| ||||    
T  31523201 taaaattaacggttcaactagctgataaatgtaaaattacat 31523160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 39746058 - 39746123
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| |||||||||||  | ||||||||||||| || | ||||| ||||||||||||    
T  39746058 tttggtaaaattagcggttcaactagttgataaatgtaaaatgacgtaaaagggcatttttaattc 39746123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 17756694 - 17756646
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaagga 143  Q
    |||||||| || ||||||||||| ||||||||||||| |||| ||||||    
T  17756694 taaaattagcgattcaactaactaataaatgtaaaatgacataaaagga 17756646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 17765681 - 17765633
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaagga 143  Q
    |||||||| || ||||||||||| ||||||||||||| |||| ||||||    
T  17765681 taaaattagcgattcaactaactaataaatgtaaaatgacataaaagga 17765633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 39678100 - 39678036
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggaca 145  Q
    |||||||| ||||||||||||| | |||||||||| | ||||| ||||||| || | ||||||||    
T  39678100 attaaagtgtttgataaaattagcagttcaactaaataataaaggtaaaatgacttaaaaggaca 39678036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 40222447 - 40222506
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||||||||||| || || || | |||||||| |||| ||||||||||||||||||    
T  40222447 taaaattaacggttcaattagctgatga-tgtaaaattacataaaaggacatttttaattc 40222506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 31050046 - 31049947
Alignment:
Q  43 ctgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaag 141  Q
    ||||||| |||||||| | | |||||||||| ||| ||| ||||||| ||||||||||||| ||||||||||| || ||||||||||||| |||| ||||    
T  31050046 ctgatagcttatagcttatgaccgatagctgataagttagttaaagtgtttgataaaattagcggttcaactacctgataaatgtaaaatgacataaaag 31049947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 27720056 - 27720126
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||| |||||||||||    
T  27720056 aagtgtttggtaaaattagcggttcaactagcttataaatgtaaaatgacataaaaggatatttttaattc 27720126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 7317018 - 7317088
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||||||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  7317018 aagtgtttggtaaaattaacggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 7317088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 21897454 - 21897360
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattctaatataattattaacttat 175  Q
    |||||||| |||| ||||||||  | |||||||| || ||||||||||||| |||| ||| || ||||||| |||||||| ||||||||| ||||    
T  21897454 attaaagtgtttggtaaaattagtgattcaactagctgataaatgtaaaatgacataaaatgatatttttatttctaataaaattattaaattat 21897360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 5301015 - 5301077
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| |||||||| |||||||||| |||||||||||||||||  ||| ||||||||||    
T  5301015 aagtgtttggtaaaattagcggttcaactgacttataaatgtaaaatggcataaaaggacatt 5301077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 5682297 - 5682227
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| | |||||| ||||| ||| ||||||||| |||| ||| ||||||||||||||    
T  5682297 aagtgtttgataaaattagcagttcaattaactgatagatgtaaaattacatgaaatgacatttttaattc 5682227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 11016401 - 11016296
Alignment:
Q  38 tataactgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||| ||||||| |||||||| | | | |||||||| |||  || ||||||| |||| |||||||| ||||||||||| || ||||||||||||| ||||    
T  11016401 tatagctgatagcttatagcttatgcctgatagctgataagctagttaaagtgtttggtaaaattagcggttcaactagctgataaatgtaaaatgacat 11016302  T
Q  137 taaagg 142  Q
     |||||    
T  11016301 aaaagg 11016296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 12140277 - 12140349
Alignment:
Q  83 taaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||| |||| |||||||||||||||||||| || ||||  ||||| | |||| ||||||||||||| ||||    
T  12140277 taaagtgtttggtaaaattaacggttcaactagctgataatggtaaatttacataaaaggacattttttattc 12140349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 15590590 - 15590630
Alignment:
Q  96 aaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  15590590 aaaattaacggttcaactaactgataaatataaaataacat 15590630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 28077191 - 28077131
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    ||||||| |||| |||||||| ||||||||||| || ||||||||||||| |||| |||||    
T  28077191 ttaaagtgtttggtaaaattagcggttcaactagctgataaatgtaaaatgacataaaagg 28077131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 3636314 - 3636384
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||| ||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  3636314 aagtgtttggtaaaattagcggtccaattagctgatagatgtaaaattacataaaaggacatttttaattc 3636384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 22756974 - 22756924
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaat 131  Q
    |||||||| |||| |||||||| |||||||||||||| ||||| |||||||    
T  22756974 attaaagtgtttggtaaaattagcggttcaactaactaataaaggtaaaat 22756924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 10856851 - 10856794
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    |||| |||||||||| || ||||||||||| || ||||||||||||| |||| |||||    
T  10856851 aagtgtttgataaaaatagcggttcaactagctgataaatgtaaaatgacataaaagg 10856794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 20564178 - 20564109
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    ||||||||| |||||||| ||| ||  ||| || ||||||||||||| |||| |||||| ||||||||||    
T  20564178 aagtatttggtaaaattagcgggtctgctagctgataaatgtaaaatgacataaaaggatatttttaatt 20564109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 12298025 - 12297973
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    |||| ||||| || |||||||||||||| ||||||||||||| |||| |||||    
T  12298025 tttggtaaaaatagcggttcaactaactgataaatgtaaaatgacataaaagg 12297973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 32650733 - 32650804
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||||||| |||||||| |||||||| ||||| ||   |||||| |||||| ||| ||||||||| ||||    
T  32650733 attaaagtatttggtaaaattagcggttcaattaactgat---tgtaaattaacataaaatgacattttttattc 32650804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 9478 - 9548
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||| |||||||||||    
T  9478 aagtgtttggtaaaattagcggttcaactagcttataaatgtaaaatgacataaaaggatatttttaattc 9548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 31408800 - 31408730
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||| |||| |||| ||||| |||||||    
T  31408800 aagtatttggtaaaattaacggttcaactaactaataaatataaaatgacataaaagaacattcttaattc 31408730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 6279741 - 6279803
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| ||||||||||||| |||||||||| ||||||||||||| ||| |||| ||||||||||    
T  6279741 aagtgtttgataaaattagcggttcaacttacttataaatgtagaatgacataaaaggacatt 6279803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 11663327 - 11663391
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||||||| |||||||||||||||||||| ||||||| |||| |||||  ||||||||||    
T  11663327 tttggtaaaattagcggttcaactaacttataaacgtaaaatgacataaaagggtatttttaatt 11663391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 13947543 - 13947594
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||| |||||||||||||||||||||||||| | ||||| ||||||||||||    
T  13947543 aagtgtttgataaaattaacggttcaactaattaataaaggtaaaataacat 13947594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 16475473 - 16475354
Alignment:
Q  27 taaaaatagcgtataactgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatg 125  Q
    ||||||||| | ||| || |||| |||||||||| | | |||||||| |||  || ||||||| |||| |||||||| |||||||||||||| ||||| |    
T  16475473 taaaaatagtggatagcttatagcttatagctgacgactgatagctgataagctaattaaagtgtttggtaaaattagcggttcaactaactaataaagg 16475374  T
Q  126 taaaataacattaaaggaca 145  Q
    |||||| || | ||||||||    
T  16475373 taaaatgacttaaaaggaca 16475354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 1175496 - 1175426
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  1175496 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 1175426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 3671016 - 3670946
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  3671016 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 3670946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 6892855 - 6892925
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||| |||||||||||||||||| || || ||| ||||||||| |||| |||||| |||||||||||    
T  6892855 aagtgtttaataaaattaacggttcaattagctgatagatgtaaaattacataaaaggatatttttaattc 6892925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 10697998 - 10697928
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| | ||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  10697998 aagtgtttgataaaattagctgttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 10697928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 11100054 - 11100124
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||||||||| ||||||||||||| |||| |||||  ||| |||||||    
T  11100054 aagtgtttggtaaaattagcggttcaactaactgataaatgtaaaatgacataaaagggtattcttaattc 11100124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 30773593 - 30773663
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  30773593 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 30773663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 35236009 - 35236079
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  35236009 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 35236079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 23921799 - 23921671
Alignment:
Q  27 taaaaatagcgtataactgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatg 125  Q
    ||||||||||| ||| ||||||| |||||||||| | | |||||||| |||  || || |||| |||| |||||||| | |||||||||  | |||||||    
T  23921799 taaaaatagcggatagctgatagcttatagctgatgactgatagctgataagctagttgaagtgtttggtaaaattagc-gttcaactaggtgataaatg 23921701  T
Q  126 taaaataacattaaaggacatttttaattc 155  Q
    |||||| |||| ||||| ||| ||||||||    
T  23921700 taaaatgacataaaaggtcatctttaattc 23921671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 649375 - 649323
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||||||| ||||| |||| ||||||||||||||||| |||| ||||||||||    
T  649375 taaaattagcggtttaactgacttataaatgtaaaatgacataaaaggacatt 649323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 6350260 - 6350210
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaat 131  Q
    |||||||| |||| |||||||| ||||||||||| || |||||||||||||    
T  6350260 attaaagtgtttggtaaaattagcggttcaactagctgataaatgtaaaat 6350210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 22653419 - 22653362
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    |||| |||| |||||||| ||||||||||| || ||||||||||||| |||| |||||    
T  22653419 aagtgtttggtaaaattagcggttcaactagctgataaatgtaaaatgacataaaagg 22653362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 35640663 - 35640606
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    ||||||||| ||||| || ||||||||||| || ||||||||||||| |||| |||||    
T  35640663 aagtatttggtaaaaatagcggttcaactagctgataaatgtaaaatgacataaaagg 35640606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 43571226 - 43571182
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaa 129  Q
    ||||||||| |||||||||||| |||| ||||| |||||||||||    
T  43571226 aagtatttggtaaaattaacggatcaattaactcataaatgtaaa 43571182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 11051126 - 11051020
Alignment:
Q  42 actgatagtttatagctgagggccgatagctgctaaatta-ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaa 140  Q
    |||||||| |||||||||| | |  ||||||| |||| || || |||| |||| |||||||| |||||||||| ||||||||||||||||| ||| ||||    
T  11051126 actgatagcttatagctgatgacttatagctgataaactagttgaagtgtttggtaaaattagcggttcaactgacttataaatgtaaaatgacactaaa 11051027  T
Q  141 ggacatt 147  Q
    |||||||    
T  11051026 ggacatt 11051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 33510081 - 33510011
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||||||||||||||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  33510081 aagtgtttgataaaattaacggttcaattagctgatagatgtaaaattacataaaaggacatttttaattc 33510011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 55765295 - 55765225
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||||||||||||||| |||||||| ||||||| |||| |||||| |||||||||||    
T  55765295 aagtgtttggtaaaattaacggttcaactagcttataaacgtaaaatgacataaaaggatatttttaattc 55765225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 4464880 - 4464940
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||  ||| |||||||    
T  4464880 taaaattaacggttcaactaactgataaatgtaaaataacataaaagggtattcttaattc 4464940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 49551701 - 49551637
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||||||| ||||||||||| ||| |||||||||||| |||| |||||||||||||||||    
T  49551701 tttggtaaaattagcggttcaactagcttgtaaatgtaaaatgacataaaaggacatttttaatt 49551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 35842202 - 35842272
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| |||||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  35842202 aagtgtttgataaaattagcggttcaattacctgatagatgtaaaattacataaaaggacatttttaattc 35842272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 24953650 - 24953715
Alignment:
Q  110 aactaacttataaatgtaaaataacattaaaggacatttttaattctaatataattattaacttat 175  Q
    ||||| || ||||||||||||| |||| |||||||||||||| |||||||| ||||||||| ||||    
T  24953650 aactagctgataaatgtaaaatgacataaaaggacatttttatttctaataaaattattaaattat 24953715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 31435719 - 31435654
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||||| ||||||||| || ||||||||||||| |||| |||| |||||||||||||    
T  31435719 tttggtaaaattaacagttcaactagctgataaatgtaaaatgacataaaagaacatttttaattc 31435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 17716404 - 17716344
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggaca 145  Q
    |||| |||| ||||||||  ||||||||||||||||||||||||||| |||| ||||||||    
T  17716404 aagtgtttggtaaaattagtggttcaactaacttataaatgtaaaatgacataaaaggaca 17716344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 6183764 - 6183834
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| |||||||||  ||||||||||||| ||||||||||||| | || ||| |||||| |||||||    
T  6183764 aagtatttaataaaattagtggttcaactaactgataaatgtaaaattaaataaaaagacattcttaattc 6183834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 29627662 - 29627732
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  29627662 aagtgtttggtaaaattagcggttcaattagctgatagatgtaaaattacataaaaggacatttttaattc 29627732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 35580361 - 35580431
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||||||||||||||| ||||||||  |||||| |||| |||||  |||||||||||    
T  35580361 aagtgtttggtaaaattaacggttcaactagcttataaacataaaatgacataaaagggtatttttaattc 35580431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 36485776 - 36485846
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| ||  ||||| ||||||||| |||| ||||||||||||||||||    
T  36485776 aagtgtttggtaaaattagcggttcaattagtttatatatgtaaaattacataaaaggacatttttaattc 36485846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 37971029 - 37970959
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||||||||||||||| ||||||| |||| |||||  |||| ||||||    
T  37971029 aagtgtttggtaaaattagcggttcaactaacttataaacgtaaaatgacataaaagggtatttctaattc 37970959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 43077564 - 43077634
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||| ||||| || ||||||||||||| |||  ||||||||||||||||||    
T  43077564 aagtgtttggtaaaattagcggtttaactagctgataaatgtaaaattacacaaaaggacatttttaattc 43077634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 44433252 - 44433182
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |  |||||||| ||| |||||||||||| |||| ||||||||||||||||||    
T  44433252 aagtgtttggtaaaattagcaattcaactagcttgtaaatgtaaaatgacataaaaggacatttttaattc 44433182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 55829721 - 55829651
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||| |||| ||| |  |||||||||||    
T  55829721 aagtgtttgataaaattagcggttcaactagcttataaacgtaaaatgacataaaaaggtatttttaattc 55829651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 2187807 - 2187742
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||||||  ||| ||||||||||||||||| ||  | ||||||||||||| |||||||||||||||    
T  2187807 ttaaagtgcttgctaaaattaacggttcaattagttgataaatgtaaaatgacattaaaggacatt 2187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 30365506 - 30365563
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||||||| ||||| |||| ||||||||||||||||| |||| ||||||||||    
T  30365506 tttggtaaaattagcggtttaactgacttataaatgtaaaatgacataaaaggacatt 30365563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 31953767 - 31953726
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaat 131  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  31953767 tttgataaaaataacggttcaactaactgataaatgtaaaat 31953726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 40120596 - 40120531
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||||||||  |||| |||||||| ||||||||||||| |||| |||||| ||| |||||||    
T  40120596 tttgataaaattagtggtttaactaactgataaatgtaaaatgacataaaaggatattattaattc 40120531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 43326628 - 43326684
Alignment:
Q  93 gataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttt 149  Q
    |||||||||| |||||||||||| | ||||||||||||| |||| |||| |||||||    
T  43326628 gataaaattagcggttcaactaagtgataaatgtaaaatgacataaaagaacatttt 43326684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 56269512 - 56269572
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  56269512 taaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 56269572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 56544994 - 56545061
Alignment:
Q  88 tatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||| |||||||||||||||||||| || | ||||||||| | |||| ||||  ||||||||||||    
T  56544994 tatttggtaaaattaacggttcaactagctaacaaatgtaaatttacataaaagagcatttttaattc 56545061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 7390582 - 7390660
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattctaata 160  Q
    ||||||||||||||||||||||| ||| || || || ||||| ||||||| |||| ||| || ||| || |||||||||    
T  7390582 ttaaagtatttgataaaattaacagtttaattagctgataaacgtaaaatgacataaaatgatattctttattctaata 7390660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 22431517 - 22431455
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| ||||||||  |||||||||||||||||||| |||||| |||| |||| |||||    
T  22431517 aagtgtttggtaaaattagtggttcaactaacttataaatataaaatgacataaaagaacatt 22431455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 22893260 - 22893190
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| || |||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  22893260 aagtgtttggtaaaattagcgattcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 22893190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 22944928 - 22944858
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| || |||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  22944928 aagtgtttggtaaaattagcgattcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 22944858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 25198735 - 25198804
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||| |||| |||||||||||| ||||||||||||| ||| ||||||| ||| |||||||    
T  25198735 aagtgtttggtaaaaataacagttcaactaactgataaatgtaaaatgaca-taaaggatattcttaattc 25198804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 27381750 - 27381796
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    ||||||||||||||||||| ||||||||||||||  |||||| ||||    
T  27381750 tttgataaaattaacggttgaactaacttataaacataaaatgacat 27381796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 36197567 - 36197525
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaa 123  Q
    |||||||| |||| ||||||||||||||||||||||| |||||    
T  36197567 attaaagtgtttggtaaaattaacggttcaactaactaataaa 36197525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 37832671 - 37832603
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| ||||| || | ||||||||| || ||||||||||||||||| ||||||||||| ||||||    
T  37832671 aagtgtttggtaaaactagctgttcaactagctgataaatgtaaaataaca-taaaggacattcttaatt 37832603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 26827234 - 26827186
Alignment:
Q  88 tatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||||| ||||| || ||||||||||| || ||||||||||||||||||    
T  26827234 tatttggtaaaaatagcggttcaactagctgataaatgtaaaataacat 26827186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 41863515 - 41863575
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||| || |||||||||||||| ||||||||||||| |||| |||||  ||| |||||||    
T  41863515 taaaactagcggttcaactaactgataaatgtaaaatgacataaaagggtattcttaattc 41863575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 50503228 - 50503161
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||||||||||||||   | ||||||||||||| |||| ||||| ||| ||||||||    
T  50503228 aagtgtttggtaaaattaacggttcaact---tgataaatgtaaaatgacataaaaggtcatctttaattc 50503161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 35001617 - 35001544
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||||||| |||| |||||||| |||||||||||||| ||||||||||||| |||| ||| |||||| ||||||    
T  35001617 attaaagtgtttgttaaaattagcggttcaactaactgataaatgtaaaatgacataaaatgacattcttaatt 35001544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 36407961 - 36407896
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||| |||||  |||||||||||    
T  36407961 tttggtaaaattaacggttcaactaacttataaacgtaaaatgacataaaagggtatttttaattc 36407896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 17845284 - 17845222
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||| |||| ||||||||||    
T  17845284 aagtgtttggtaaaattagcggttcaactgacttataaatgtaaaatgacataaaaggacatt 17845222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 23030557 - 23030495
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatt 147  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||| | |||| ||||||||||    
T  23030557 aagtgtttggtaaaattaacggttcaactgacttataaatgtaaattgacataaaaggacatt 23030495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 7884086 - 7884140
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    ||||||| ||||||||||||| | ||||||||| || ||||||||||||||||||    
T  7884086 ttaaagtgtttgataaaattagcagttcaactagctgataaatgtaaaataacat 7884140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 9486503 - 9486433
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||||||||||| ||| ||||| ||| || |||||| |||| ||||||||||||||||||    
T  9486503 aagtgtttggtaaaattaacggtgcaattaactgatagatataaaattacataaaaggacatttttaattc 9486433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 14101103 - 14101165
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaa 152  Q
    |||| |||||||| |||| ||||||| |||||||||||||||||||| |||| ||||| ||||    
T  14101103 tttggtaaaattagcggtacaactaatttataaatgtaaaataacataaaagaacattgttaa 14101165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 14411120 - 14411182
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaa 152  Q
    |||| |||||||| |||| ||||||| |||||||||||||||||||| |||| ||||| ||||    
T  14411120 tttggtaaaattagcggtacaactaatttataaatgtaaaataacataaaagaacattgttaa 14411182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 33608155 - 33608225
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||| ||||||||||||| || |||||||||||| ||||| |||||| ||| |||||||    
T  33608155 aagtgtttggtaaaatgaacggttcaactagctgataaatgtaaaaaaacataaaaggatattattaattc 33608225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 43135148 - 43135078
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  43135148 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 43135078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 38530569 - 38530638
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| |||||||| |||||||| || || ||| ||||||||| |||| |||||||||||||||||    
T  38530569 aagtgtttggtaaaattagcggttcaattagctgatagatgtaaaattacataaaaggacatttttaatt 38530638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 40894109 - 40894040
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| ||||||||||||||||| ||||| ||||||||| ||| |||| ||| |||||| ||||||    
T  40894109 aagtgtttggtaaaattaacggttcaattaactgataaatgtagaatgacataaaaagacattcttaatt 40894040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 44597345 - 44597280
Alignment:
Q  90 tttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||||||| ||||||||||| |||||||| ||||||| |||| |||||  |||||||||||    
T  44597345 tttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagggtatttttaattc 44597280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 48730256 - 48730199
Alignment:
Q  98 aattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    ||||| |||||||||||||| ||||||||||||| |||| |||||  |||||||||||    
T  48730256 aattagcggttcaactaactgataaatgtaaaatgacataaaagggtatttttaattc 48730199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 48621107 - 48621047
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| |||||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  48621107 taaaattagcggttcaattagctgatagatgtaaaattacataaaaggacatttttaattc 48621047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 482406 - 482476
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||||||| |||| ||||   |||||||||||    
T  482406 aagtgtttggtaaaattagcggttcaactagcttataaacgtaaaatgacataaaagagtatttttaattc 482476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 24171531 - 24171461
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| ||||||||  |||||||||| || |||||| |||||| |||| || |||||||||||||||    
T  24171531 aagtgtttggtaaaattagtggttcaactagctgataaatataaaatgacataaagggacatttttaattc 24171461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 24838623 - 24838570
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacat 136  Q
    |||||||||||||||||||||||||||  || ||||||||||| | |||||||||    
T  24838623 ttaaagtatttgataaaattaacggtt-gacgaacttataaatatgaaataacat 24838570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 7909088 - 7909020
Alignment:
Q  81 attaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttt 149  Q
    |||||| |||||| ||||||||||| |||||||| |  |||||  |||||| |||| ||||||||||||    
T  7909088 attaaaatatttggtaaaattaacgattcaactagccgataaacataaaatgacataaaaggacatttt 7909020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 27867109 - 27867145
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaat 131  Q
    |||||||| |||||||||||||| |||||||||||||    
T  27867109 taaaattagcggttcaactaactgataaatgtaaaat 27867145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 49054470 - 49054426
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaa 129  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||    
T  49054470 aagtgtttgataaaattaaaggttcaactaattgataaatgtaaa 49054426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 49148932 - 49148872
Alignment:
Q  95 taaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||||||| |||||||| || || ||| ||||||||| |||| ||| ||||||||||||||    
T  49148932 taaaattagcggttcaattagctgatagatgtaaaattacataaaatgacatttttaattc 49148872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 64656 - 64586
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| |||||||| || || ||| ||||||||| |||| ||||||||||||||||||    
T  64656 aagtgtttgttaaaattagcggttcaattagctgatagatgtaaaattacataaaaggacatttttaattc 64586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 4965 - 4896
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| ||||||||||| |||||||| || ||||||||||||| | || |||||||||| ||||||    
T  4965 aagtgtttggtaaaattaacgattcaactatctgataaatgtaaaattatataaaaggacattcttaatt 4896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 72175 - 72244
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaatt 154  Q
    |||| |||| ||||||||||||||||| ||||| ||||||||| ||| |||| ||| |||||| ||||||    
T  72175 aagtgtttggtaaaattaacggttcaattaactgataaatgtagaatgacataaaaagacattcttaatt 72244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 192779 - 192719
Alignment:
Q  82 ttaaagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaagg 142  Q
    ||||||| |||| |||||||| ||||||||||| || ||||||||||||| |||| |||||    
T  192779 ttaaagtgtttggtaaaattagcggttcaactagctgataaatgtaaaatgacataaaagg 192719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 98522 - 98591
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacattaaaggacatttttaattc 155  Q
    |||| |||| |||||||| ||||| ||||| || |||| ||||||||||||| |||||| |||||||||||    
T  98522 aagtgtttggtaaaattagcggtttaactagctgataa-tgtaaaataacataaaaggatatttttaattc 98591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 22315 - 22367
Alignment:
Q  85 aagtatttgataaaattaacggttcaactaacttataaatgtaaaataacatt 137  Q
    |||| |||| ||||| |||||||||||||| || ||||||||||||| |||||    
T  22315 aagtgtttggtaaaaataacggttcaactagctaataaatgtaaaatgacatt 22367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University