View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14482_low_10 (Length: 229)
Name: NF14482_low_10
Description: NF14482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14482_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 53493464 - 53493616
Alignment:
| Q |
3 |
atagatagacaagtatatattgtggatttttccaaatcttcatcgttgaagttaataccattgtctatgttaaactttttgggtatgcgagtggatttgg |
102 |
Q |
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| T |
53493464 |
atagatagacaagtatatattgtggatttttccaaatcttcatcgttgaagttaataccattgtctatgttaaactttttgggtatgcgagtggatttgg |
53493563 |
T |
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| Q |
103 |
ttcaaaatgaaataacacagttgacaaatacattgagtcagtgcacactgcac |
155 |
Q |
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| T |
53493564 |
ttcaaaatgaaataacacagttgacaaatacattgagtcagtgtacactgcac |
53493616 |
T |
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