View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14483_high_14 (Length: 449)
Name: NF14483_high_14
Description: NF14483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14483_high_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 18 - 449
Target Start/End: Complemental strand, 40221899 - 40221468
Alignment:
| Q |
18 |
atgtgcagtaacattatttggttgggggatttgaattatagacttgccgctggttacgatgaaattcatgagctactaaaaaataataacttgaaggcgt |
117 |
Q |
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| T |
40221899 |
atgtgcagtaacattatttggttgggggatttgaattatagacttgccgctggttacgatgaaattcatgagctactaaaaaacaataacttgaaggcgt |
40221800 |
T |
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| Q |
118 |
tactagagaaagatcaactaaggatggagcagaatgctggacgaatatttgaaggttggaatgaagggagcatatactttgctcctacttacaaatactt |
217 |
Q |
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| T |
40221799 |
tactagagaaagatcaactaaggatggagcagaatgctggacgaatatttgaaggttggaatgaagggagcatatactttgctcctacttacaaatactt |
40221700 |
T |
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| Q |
218 |
gatgaattctgaccaatatgttgctcaaacttgcaaatcaaaggaaaaacgacgcactcctgcttggtatgatttttatgattcaactcacattacgaaa |
317 |
Q |
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| T |
40221699 |
gatgaattctgaccaatatgttgctcaaacttgcaaatcaaaggaaaaacgacgcactcctgcttggtatgatttttatgattcaactcacattacgaaa |
40221600 |
T |
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| Q |
318 |
gctattaaaatttgatatcttttaattaatattttttggttgctgaaggtgtgatagaattctatggaaaggagaaggactaaatcagaaaatgtatgtt |
417 |
Q |
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| T |
40221599 |
gctattaaaatttgatatcttttaattaatattttttggttgctgaaggtgtgatagaattctatggaaaggagaaggactaaatcagaaaatgtatgtt |
40221500 |
T |
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| Q |
418 |
agaggagagtcaaaattctctgaccatagacc |
449 |
Q |
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| T |
40221499 |
agaggagagtcaaaattctctgaccatagacc |
40221468 |
T |
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